NO06G00940, NO06G00940 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G00940 vs. NCBI_GenBank
Match: NP_001090480.1 (uncharacterized protein LOC779393 [Xenopus laevis] >AAI23161.1 MGC154358 protein [Xenopus laevis]) HSP 1 Score: 392.5 bits (1007), Expect = 7.800e-106 Identity = 191/200 (95.50%), Postives = 193/200 (96.50%), Query Frame = 0 Query: 1 MFGRLWTKYNAALETNPLLIKAMTSLTGFTLGDILAQKFVMPD-EKGYDVMRTARLGSFGFLVHGPTGHYFYSWLDKQIPGTAMKTVATKVAIDQLLWNPCFGVMFFSYLGLAEGKSFTDIQAKIKNDLTTAVVGSWTVWIPAHFVNFRFVPSSQRLLYINSIQIGYNIFLSFLGNKKVDAPEVVKEAEGAVTSAVDKAK 200 MFGRLWTKYNAALETNPLLIKA+TSLTGFTLGDILAQKFVMPD EKGYD+MRT RLGSFGFLVHGPTGHYFYSWLDKQIPGTAMKTVATKVAIDQLLWNPCFGVMFFSYLGLAEGKSF DIQ KIKNDLTTAVVGSWTVWIPAHFVNFRFVPSSQRLLYINSIQIGYNIFLSFLGNKKVD PEVVKEAE AVTSAVDK K Sbjct: 1 MFGRLWTKYNAALETNPLLIKAVTSLTGFTLGDILAQKFVMPDKEKGYDLMRTVRLGSFGFLVHGPTGHYFYSWLDKQIPGTAMKTVATKVAIDQLLWNPCFGVMFFSYLGLAEGKSFADIQTKIKNDLTTAVVGSWTVWIPAHFVNFRFVPSSQRLLYINSIQIGYNIFLSFLGNKKVDEPEVVKEAEAAVTSAVDKMK 200
BLAST of NO06G00940 vs. NCBI_GenBank
Match: EWM26132.1 (mpv17-like protein [Nannochloropsis gaditana] >EWM26133.1 mpv17-like protein [Nannochloropsis gaditana]) HSP 1 Score: 353.6 bits (906), Expect = 4.000e-94 Identity = 167/188 (88.83%), Postives = 177/188 (94.15%), Query Frame = 0 Query: 1 MFGRLWTKYNAALETNPLLIKAMTSLTGFTLGDILAQKFVMPD-EKGYDVMRTARLGSFGFLVHGPTGHYFYSWLDKQIPGTAMKTVATKVAIDQLLWNPCFGVMFFSYLGLAEGKSFTDIQAKIKNDLTTAVVGSWTVWIPAHFVNFRFVPSSQRLLYINSIQIGYNIFLSFLGNKKVDAPEVVKEA 188 MFGRLW++YN ALE NPLLIKA+TSLTGFT+GD+LAQKFV PD EKGYD+MRT RLGSFGFLVHGPTGH+FY WLDKQIPGTAMKTVATKVAIDQLLWNPCFGVMFFSYLGLAEGKSFTDIQAKIKNDL TAVVGSWTVWIPAHF+NFRFVPS+QRLLYINSIQIGYNIFLSFLGNKKVD E +K A Sbjct: 1 MFGRLWSQYNVALEKNPLLIKALTSLTGFTIGDVLAQKFVTPDEEKGYDLMRTVRLGSFGFLVHGPTGHFFYGWLDKQIPGTAMKTVATKVAIDQLLWNPCFGVMFFSYLGLAEGKSFTDIQAKIKNDLATAVVGSWTVWIPAHFINFRFVPSNQRLLYINSIQIGYNIFLSFLGNKKVDDTEELKAA 188
BLAST of NO06G00940 vs. NCBI_GenBank
Match: CBN79011.1 (peroxisomal membrane protein-related [Ectocarpus siliculosus]) HSP 1 Score: 282.3 bits (721), Expect = 1.100e-72 Identity = 133/179 (74.30%), Postives = 148/179 (82.68%), Query Frame = 0 Query: 5 LWTKYNAALETNPLLIKAMTSLTGFTLGDILAQKFVMPDEKGYDVMRTARLGSFGFLVHGPTGHYFYSWLDKQIPGTAMKTVATKVAIDQLLWNPCFGVMFFSYLGLAEGKSFTDIQAKIKNDLTTAVVGSWTVWIPAHFVNFRFVPSSQRLLYINSIQIGYNIFLSFLGNKKVDAPEV 184 +W YN AL PLL+KAMTS TGFT+GDILAQKF+ P E YD MRT RLG+FG LVHGPTGHYFY LD ++PGT TVA+KVAIDQ +WNP FGVMFF+YLGLAEGKS DIQ KIKNDL TAV+GSWTVWIPAH +NF+FVP+SQRLLYIN+IQIGYNIFLSFLGNKK D V Sbjct: 4 IWAAYNKALAAQPLLVKAMTSFTGFTVGDILAQKFISP-EDDYDFMRTLRLGTFGALVHGPTGHYFYGMLDAKLPGTKPMTVASKVAIDQTIWNPIFGVMFFTYLGLAEGKSVDDIQKKIKNDLATAVMGSWTVWIPAHTINFKFVPTSQRLLYINTIQIGYNIFLSFLGNKKADDDSV 181
BLAST of NO06G00940 vs. NCBI_GenBank
Match: GAX25226.1 (hypothetical protein FisN_5Lh310 [Fistulifera solaris] >GAX16933.1 hypothetical protein FisN_5Hh310 [Fistulifera solaris]) HSP 1 Score: 277.3 bits (708), Expect = 3.700e-71 Identity = 126/175 (72.00%), Postives = 144/175 (82.29%), Query Frame = 0 Query: 5 LWTKYNAALETNPLLIKAMTSLTGFTLGDILAQKFVMPDEKGYDVMRTARLGSFGFLVHGPTGHYFYSWLDKQIPGTAMKTVATKVAIDQLLWNPCFGVMFFSYLGLAEGKSFTDIQAKIKNDLTTAVVGSWTVWIPAHFVNFRFVPSSQRLLYINSIQIGYNIFLSFLGNKKVD 180 LW +YN L+ PLL KA+TSLTGFTLGD+LAQKFV P +K YD+MRT RLGSFGFL+HG TGHYFY +LD ++PGTA TVATKVAIDQ +WNP FG+MFF YL EGKSF D KIK DL TAV+GSW VW+PAH +NF F+P SQRLLYINSIQIGYN+FLSFLGNKKV+ Sbjct: 4 LWARYNKMLDAQPLLTKALTSLTGFTLGDVLAQKFVEPTDKPYDLMRTVRLGSFGFLIHGTTGHYFYGFLDGKLPGTAPMTVATKVAIDQTIWNPIFGLMFFGYLNFVEGKSFEDYTNKIKADLKTAVMGSWAVWVPAHTINFAFIPPSQRLLYINSIQIGYNVFLSFLGNKKVE 178
BLAST of NO06G00940 vs. NCBI_GenBank
Match: XP_002183376.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC45076.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 264.2 bits (674), Expect = 3.200e-67 Identity = 119/175 (68.00%), Postives = 141/175 (80.57%), Query Frame = 0 Query: 5 LWTKYNAALETNPLLIKAMTSLTGFTLGDILAQKFVMPDEKGYDVMRTARLGSFGFLVHGPTGHYFYSWLDKQIPGTAMKTVATKVAIDQLLWNPCFGVMFFSYLGLAEGKSFTDIQAKIKNDLTTAVVGSWTVWIPAHFVNFRFVPSSQRLLYINSIQIGYNIFLSFLGNKKVD 180 LW +YN+ L+ PLL KA+TS+TGF+LGDILAQ F+ +KGYD MRT R+GSFGFL+HG TGHYFY +LD ++PGTA TVA+KVAIDQ +WNP FG MFF YL L EGKS D KIK DL TAV+GSW VW+PAH +NF FVP +QRLLYIN+IQIGYN+FLSFLGNK V+ Sbjct: 4 LWARYNSMLDAQPLLTKALTSMTGFSLGDILAQCFIEEGDKGYDPMRTFRMGSFGFLLHGTTGHYFYGFLDSKLPGTAPMTVASKVAIDQTIWNPIFGCMFFGYLNLMEGKSLDDYTTKIKTDLKTAVMGSWAVWVPAHTINFAFVPPAQRLLYINTIQIGYNVFLSFLGNKSVE 178
BLAST of NO06G00940 vs. NCBI_GenBank
Match: EJK66898.1 (hypothetical protein THAOC_12131, partial [Thalassiosira oceanica]) HSP 1 Score: 260.4 bits (664), Expect = 4.600e-66 Identity = 121/170 (71.18%), Postives = 137/170 (80.59%), Query Frame = 0 Query: 13 LETNPLLIKAMTSLTGFTLGDILAQKFVMPDEKGYDVMRTARLGSFGFLVHGPTGHYFYSWLDKQIPGTAMKTVATKVAIDQLLWNPCFGVMFFSYLGLAEGKSFTDIQAKIKNDLTTAVVGSWTVWIPAHFVNFRFVPSSQRLLYINSIQIGYNIFLSFLGNKKVDAPE 183 LE PLL KA+TSLTGF++GDILAQKFV D K YD MRT RLGSFGF VHG TGHYFY +LD ++PGT +TVATKV IDQ +WNP FG+MFF YL + EGKSF + K+K DL TAV+GSW VW+PAH +NF FVP SQRLLYINSIQIGYNIFLSFLGNKKVD + Sbjct: 1 LEAQPLLTKALTSLTGFSIGDILAQKFVNDDGKPYDPMRTLRLGSFGFFVHGTTGHYFYGFLDSKLPGTKPQTVATKVLIDQTMWNPIFGLMFFGYLNVCEGKSFEEYTKKVKADLKTAVMGSWAVWVPAHTINFAFVPPSQRLLYINSIQIGYNIFLSFLGNKKVDGED 170
BLAST of NO06G00940 vs. NCBI_GenBank
Match: OEU20060.1 (hypothetical protein FRACYDRAFT_167937 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 260.0 bits (663), Expect = 6.100e-66 Identity = 120/175 (68.57%), Postives = 134/175 (76.57%), Query Frame = 0 Query: 5 LWTKYNAALETNPLLIKAMTSLTGFTLGDILAQKFVMPDEKGYDVMRTARLGSFGFLVHGPTGHYFYSWLDKQIPGTAMKTVATKVAIDQLLWNPCFGVMFFSYLGLAEGKSFTDIQAKIKNDLTTAVVGSWTVWIPAHFVNFRFVPSSQRLLYINSIQIGYNIFLSFLGNKKVD 180 LW +YN L+ PLL K TSLTGFT+GDILAQKFV P +K YDVMRT RLGSFGFL HG TGHYFY LD ++PGT TVATKV IDQ +WNP FG FF YL EGKS+ D K+ DL TAV+GSW VW+PAH +NF FVP +QRLLYIN+IQIGYNIFLSFLGNK VD Sbjct: 4 LWARYNKLLDAQPLLTKCFTSLTGFTVGDILAQKFVEPSDKPYDVMRTVRLGSFGFLFHGSTGHYFYGLLDSKLPGTKPVTVATKVIIDQTIWNPIFGCAFFGYLNAVEGKSWNDYTKKLNADLKTAVMGSWAVWVPAHTINFAFVPPAQRLLYINTIQIGYNIFLSFLGNKAVD 178
BLAST of NO06G00940 vs. NCBI_GenBank
Match: XP_002287363.1 (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >EED94806.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 251.5 bits (641), Expect = 2.200e-63 Identity = 117/169 (69.23%), Postives = 132/169 (78.11%), Query Frame = 0 Query: 18 LLIKAMTSLTGFTLGDILAQKFVMPDEKGYDVMRTARLGSFGFLVHGPTGHYFYSWLDKQIPGTAMKTVATKVAIDQLLWNPCFGVMFFSYLGLAEGKSFTDIQAKIKNDLTTAVVGSWTVWIPAHFVNFRFVPSSQRLLYINSIQIGYNIFLSFLGNKKVDAPEVVKE 187 LL KA+TS TGFT+GDILAQ FV D K YDVMRT RLGSFGF +HG TGHYFY +LD + PGT TVATKV IDQ +WNP FG+MFF YL + EGKSF D + KIK DL TAV+GSW VW+PAH +NF F+P QRLLYINSIQIGYN+FLSFLGNKKV+ KE Sbjct: 1 LLTKALTSFTGFTIGDILAQNFVNDDGKPYDVMRTVRLGSFGFFIHGTTGHYFYGFLDSKFPGTKPLTVATKVLIDQTIWNPIFGLMFFGYLNVMEGKSFEDYKNKIKADLKTAVMGSWAVWVPAHTINFAFIPPQQRLLYINSIQIGYNVFLSFLGNKKVEGDAEKKE 169
BLAST of NO06G00940 vs. NCBI_GenBank
Match: EWM28134.1 (mpv17-like protein [Nannochloropsis gaditana]) HSP 1 Score: 229.2 bits (583), Expect = 1.100e-56 Identity = 110/185 (59.46%), Postives = 136/185 (73.51%), Query Frame = 0 Query: 5 LWTKYNAALETNPLLIKAMTSLTGFTLGDILAQKFVMPDEKGYDVMRTARLGSFGFLVHGPTGHYFYSWLDKQIPGTAMKTVATKVAIDQLLWNPCFGVMFFSYLGLAEGKSFTDIQAKIKNDLTTAVVGSWTVWIPAHFVNFRFVPSSQRLLYINSIQIGYNIFLSFLGNKKVDAPEVVKEAEG 190 LW YN L+ PLL KA+TS GF++GD+LAQKF+ E D+ R +L FG LVHGPTGHYFY +LD ++PGT+ TVA+KVAIDQLLWNP FG MFF +LGL EG++ I+ +I+ DL +V GSWTVW AH +NFRF+P+SQRLLYINS+QIGYN+FLSFL N+ APE A G Sbjct: 104 LWKGYNQLLKDQPLLTKALTSFVGFSVGDLLAQKFIDKSEV-VDLKRLLKLAFFGLLVHGPTGHYFYGFLDGKMPGTSAVTVASKVAIDQLLWNPIFGTMFFGWLGLTEGQNLEGIKNRIEKDLWASVKGSWTVWPIAHAINFRFIPNSQRLLYINSVQIGYNMFLSFLANRNA-APEPAPVAAG 286
BLAST of NO06G00940 vs. NCBI_GenBank
Match: XP_009040828.1 (hypothetical protein AURANDRAFT_15607, partial [Aureococcus anophagefferens] >EGB04441.1 hypothetical protein AURANDRAFT_15607, partial [Aureococcus anophagefferens]) HSP 1 Score: 214.9 bits (546), Expect = 2.200e-52 Identity = 100/169 (59.17%), Postives = 122/169 (72.19%), Query Frame = 0 Query: 5 LWTKYNAALETNPLLIKAMTSLTGFTLGDILAQKFVMPDEKGYDVMRTARLGSFGFLVHGPTGHYFYSWLDKQIPGTAMKTVATKVAIDQLLWNPCFGVMFFSYLGLAEGKSFTDIQAKIKNDLTTAVVGSWTVWIPAHFVNFRFVPSSQRLLYINSIQIGYNIFLSFL 174 +W Y AALE +PLLIK +TS+ GF LGD+LAQ F+ +K YD+ RT R SFG LVHG T H+FY LD +IPGT VA+KV IDQ+LWNP FG+MFF Y+G+ EG KIKNDL T V GSWTVW AH +NF+F+P+SQR+LYIN+IQI YN FLS + Sbjct: 1 VWAAYEAALEKDPLLIKGLTSMIGFFLGDVLAQCFIEKSDK-YDIWRTIRFSSFGLLVHGTTSHWFYGKLDGKIPGTGAGAVASKVGIDQVLWNPIFGIMFFGYMGIFEGSGVGGTITKIKNDLLTQVTGSWTVWPIAHAINFKFIPNSQRVLYINTIQIFYNCFLSII 168 The following BLAST results are available for this feature:
BLAST of NO06G00940 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G00940 ID=NO06G00940|Name=NO06G00940|organism=Nannochloropsis oceanica|type=gene|length=1912bpback to top protein sequence of NO06G00940.1 >NO06G00940.1-protein ID=NO06G00940.1-protein|Name=NO06G00940.1|organism=Nannochloropsis oceanica|type=polypeptide|length=200bpback to top Synonyms
Publications
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