NO06G00840, NO06G00840 (gene) Nannochloropsis oceanica

Overview
NameNO06G00840
Unique NameNO06G00840
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2174
Alignment locationchr6:285910..288083 -

Link to JBrowse

Properties
Property NameValue
DescriptionChaperonin
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:285910..288083 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0000166nucleotide binding
Vocabulary: Biological Process
TermDefinition
GO:0042026protein refolding
GO:0009987cellular process
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0016020membrane
GO:0005737cytoplasm
Vocabulary: INTERPRO
TermDefinition
IPR027413GROEL-like_equatorial
IPR027409GroEL-like_apical_dom
IPR002423Cpn60/TCP-1
IPR001844Chaprnin_Cpn60
Homology
BLAST of NO06G00840 vs. NCBI_GenBank
Match: EWM26124.1 (chaperonin [Nannochloropsis gaditana])

HSP 1 Score: 755.0 bits (1948), Expect = 1.500e-214
Identity = 395/507 (77.91%), Postives = 437/507 (86.19%), Query Frame = 0
Query:    2 TTKSLSPTSTPLSMAGRLLALLFLLISCSLPTLGFLQPPRVPLASYATARRHGSIQMMAKNVRFGDKGLDKLVEGINVVGDAVKVTLGPLGRNVVLSRVDEPYPQIVNDGATIAREIDLVNPEVNVGVRLIQEVAKTSDRRAGDGTSTSIIMTQAIVNQGLKYVKSGMNPVSLRKGIMGATNMLVERIPLVARKVTGVEDLEKVATVSTGGDKEMAKIIGSVFGRVDLDAKLGGATLLEDGNTSEDELEISSGMRLDRSGFESAYYVTDMERMVCELRKPRVLVTNYPLLHNYQMIPIMEEIAKTGEPLLVVAEETKDDALSLLVVNKLRGTVEVCSVRAPFAGARRKQFLQDIALATGATFIDSDLGMMLQTMTMDMLGVAESAVTTREHTTLRTSEIFDDIIAEHVKNLKKELDGCDNVYDEQKLQYRIAALTGGVAVIKVGAATETELKDKKLRYEDALNSVRTAIEMGVFPGGGQRLSTWGKACGRRFWQRFPIRKRELGRRL 509
            TT S+ P S       + L LL +L SC+LP+L FL    + L     + RH +++MMAKNV+FGDKGLDKLVEGINVVG+AVKVTLGP GRNVVLSR DEPYPQIVNDG TIAREIDL N EVNVGVRLIQEVAK SDRRAGDGT+TSII+TQAIVNQGLKYVKSGMNPVSLRKGI GAT ML +RIP +ARKV GVEDLE +ATVSTGGD++MAKII SVFGRVDLDAKLGGATLLEDGNT+EDELE+SSGMRLDRSG+++AY+VTD ERMVCELRKPRVLVTNYPLLH+YQ++PI+EE+AKTGE LL+V+EETKD+ALSLLVVNKLRG V VCSVRAPFAGARRKQFLQDIALATGATFIDSDLGMMLQT TM+MLGVAE+A TTREHTTLRTSEIF+DIIAEHV NLK+ELD CDNVYDEQKLQYR+AAL+GGVAVIKVGAATETELKDKKLRYEDALNSVRTAIEMGV PGGG  L   G          FP ++   G  +
Sbjct:   21 TTMSIRPRSR------QPLTLLLVLASCTLPSLAFLYQGGIRLTPRTHSVRHSTLRMMAKNVKFGDKGLDKLVEGINVVGNAVKVTLGPCGRNVVLSRADEPYPQIVNDGVTIAREIDLANEEVNVGVRLIQEVAKKSDRRAGDGTTTSIIITQAIVNQGLKYVKSGMNPVSLRKGITGATEMLAQRIPTMARKVKGVEDLENIATVSTGGDRDMAKIIASVFGRVDLDAKLGGATLLEDGNTTEDELEVSSGMRLDRSGYDTAYFVTDTERMVCELRKPRVLVTNYPLLHSYQLVPILEEVAKTGESLLIVSEETKDEALSLLVVNKLRGLVNVCSVRAPFAGARRKQFLQDIALATGATFIDSDLGMMLQTATMEMLGVAETATTTREHTTLRTSEIFEDIIAEHVGNLKRELDACDNVYDEQKLQYRVAALSGGVAVIKVGAATETELKDKKLRYEDALNSVRTAIEMGVLPGGGSALVYLGMEMRDEILAAFPDKEERAGAEI 521          
BLAST of NO06G00840 vs. NCBI_GenBank
Match: EWM24977.1 (chaperonin [Nannochloropsis gaditana])

HSP 1 Score: 428.3 bits (1100), Expect = 3.300e-116
Identity = 237/462 (51.30%), Postives = 328/462 (71.00%), Query Frame = 0
Query:   19 LLALLFLLISCSLPTLGFLQPPRVPLAS--YATARRHGSI--QMMAKNVRFGDKGLDKLVEGINVVGDAVKVTLGPLGRNVVLSRVDEPYPQIVNDGATIAREIDLVNPEVNVGVRLIQEVAKTSDRRAGDGTSTSIIMTQAIVNQGLKYVKSGMNPVSLRKGIMGATNMLVERIPLVARKVTGVEDLEKVATVSTGGDKEMAKIIGSVFGRVDLDAKLGGATLLEDGNTSEDELEISSGMRLDRSGFESAYYVTDMERMVCELRKPRVLVTNYPLLHNYQMIPIMEEIAKTGEPLLVVAEETKDDALSLLVVNKLRGTVEVCSVRAPFAGARRKQFLQDIALATGATFIDSDLGMMLQTMTMDMLGVAESAVTTREHTTLRTSEIFDDIIAEHVKNLKKELDGCDNVYDEQKLQYRIAALTGGVAVIKVGAATETELKDKKLRYEDALNSVRTAIEMGVFP 477
            ++ +  LL+S    T  FL P  +P  S   + A R GS+   MMAKNVR  +K   KLVEGIN+V +AVKVTLGP GRNVVL R     P+IVNDG TIAR+I+L +PE NVGV+L+QEVA  SD +AGDGT+TS +MTQAIVNQG++ V +G NPV+LR+GI     +L + +  +A+ V   +DL  +ATV+TGG+ EM  +I   F  V       G+T++E+  T +DE+E + G+ +DR G+ S Y+V D ER + ELRKPRVLVT   +   ++++P++E IAK+ EPL +VAE+   +ALS LVVNK+RG ++V +++AP  G RRKQ LQDIA+ATGATF+  ++G+ L+++T +MLGVAE  V  ++ TT+ T+  + + I E +  +++E+D  D+ +D++K Q R+AAL GG+A IKVGAATETELKDKKLRYEDALNSV++AIEMGV P
Sbjct:   21 MVVMATLLVS----TSAFLAPAALPELSKTRSVAARRGSLTTTMMAKNVRLSEKSRQKLVEGINIVANAVKVTLGPKGRNVVLER-KYGVPEIVNDGVTIARDIELSDPEQNVGVKLVQEVATKSDMKAGDGTTTSTVMTQAIVNQGMRQVTAGANPVALRRGIQHTAKILCDTVKQMAKPVESNKDLFDIATVATGGNAEMGAVIAKAFELVG----DSGSTVVEESQTVQDEVEFTEGLSIDR-GYVSPYFVKDQERQLVELRKPRVLVTEGKISAVHEILPLLEHIAKSKEPLFIVAEDVSGEALSALVVNKMRGVLDVVAIKAPGFGDRRKQLLQDIAVATGATFVAEEVGVTLESVTPEMLGVAEKVVVGKDTTTIVTNSNYAEAIKERILAIRREMDLMDSKFDKEKAQQRVAALGGGIARIKVGAATETELKDKKLRYEDALNSVKSAIEMGVVP 472          
BLAST of NO06G00840 vs. NCBI_GenBank
Match: XP_002291674.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED91781.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 411.8 bits (1057), Expect = 3.200e-111
Identity = 227/464 (48.92%), Postives = 318/464 (68.53%), Query Frame = 0
Query:   20 LALLFLLISCSLPTLGFLQPPRVPLASYATARRHGSIQMMAKNVRFGDKGLDKLVEGINVVGDAVKVTLGPLGRNVVLSRVDEPYPQIVNDGATIAREIDLVNPEVNVGVRLIQEVAKTSDRRAGDGTSTSIIMTQAIVNQGLKYVKSGMNPVSLRKGIMGATNMLVERIPLVARKVTGVEDLEKVATVSTGGDKEMAKIIGSVFGRVDLDAKLGGATLLEDGNTSEDELEISSGMRLDRSGFESAYYVTDMERMVCELRKPRVLVTNYPLLHNYQMIPIMEEIAKTGEPLLVVAEETKDDALSLLVVNKLRGTVEVCSVRAPFAGARRKQFLQDIALATGATFIDSDLGMMLQTMTMDMLGVAESAVTTREHTTLRTSEIFDDIIAEHVKNLKKELDGCDNVYDEQKLQYRIAALTGGVAVIKVGAATETELKDKKLRYEDALNSVRTAIEMGVFPGGGQRLS 484
            L++++L   CS  T            S+   RR  S  + AK V F ++   KLV+GIN V +AVKVTLGP GRNVVL R +   P+IVNDG TIAREI L +PE NVGVRL+QEVA  SD +AGDGT+TS IMTQAIVN G+K V SG+NP++L  GI  +  M+  +I  +++K+ GVEDL+ VAT+++ G  +M +II   F +V  +    G+T++E+  T  DE+E + G+ +DR G+ S Y+V D ER V EL  PR+LVT+  + +  +++P++E++ KT EP+L++AE+   DALS LVVNK+RG ++V ++RAP  G RRK +LQDIA+ATGAT++  ++G+ L ++T DMLG A+  V  +E TT+ T    +D +   +  +K+E +  D  +D  K Q R+AAL GG+A IKVGAATETELKDKKLRYEDALNSV++A E+G+ PGGG  L+
Sbjct:    8 LSMVYLASECSAFTAN--------SNSFQATRRLSSTALSAKRVSFKEESRKKLVDGINQVANAVKVTLGPKGRNVVLER-NYGAPEIVNDGVTIAREISLADPECNVGVRLVQEVASKSDSKAGDGTTTSTIMTQAIVNNGMKAVTSGVNPIALNAGIKKSAGMVAAKIKELSQKINGVEDLQSVATIAS-GSVDMGRIIAQAFDKVGEN----GSTVIEESQTLFDEIEFTEGLTIDR-GYISPYFVKDQERQVAELVNPRILVTDAKIDNVNEIVPLLEQLVKTKEPVLMIAEDVTGDALSALVVNKMRGVLDVVAIRAPGFGQRRKAYLQDIAIATGATYVAEEVGITLDSVTTDMLGTADRCVIAKELTTIVTDGKQEDAVIARIAQIKREGEEADTDFDRDKAQERVAALGGGIARIKVGAATETELKDKKLRYEDALNSVQSARELGIVPGGGACLA 456          
BLAST of NO06G00840 vs. NCBI_GenBank
Match: AFA52570.1 (chaperonin [Vaucheria litorea])

HSP 1 Score: 407.1 bits (1045), Expect = 7.800e-110
Identity = 224/465 (48.17%), Postives = 319/465 (68.60%), Query Frame = 0
Query:   15 MAGRLLALLFLLISCSLPTLGFLQPPRVPLASYATARRHGSIQMMAKNVRFGDKGLDKLVEGINVVGDAVKVTLGPLGRNVVLSRVDEPYPQIVNDGATIAREIDLVNPEVNVGVRLIQEVAKTSDRRAGDGTSTSIIMTQAIVNQGLKYVKSGMNPVSLRKGIMGATNMLVERIPLVARKVTGVEDLEKVATVSTGGDKEMAKIIGSVFGRVDLDAKLGGATLLEDGNTSEDELEISSGMRLDRSGFESAYYVTDMERMVCELRKPRVLVTNYPLLHNYQMIPIMEEIAKTGEPLLVVAEETKDDALSLLVVNKLRGTVEVCSVRAPFAGARRKQFLQDIALATGATFIDSDLGMMLQTMTMDMLGVAESAVTTREHTTLRTSEIFDDIIAEHVKNLKKELDGCDNVYDEQKLQYRIAALTGGVAVIKVGAATETELKDKKLRYEDALNSVRTAIEMGVFPGGG 480
            MA R  + L LL+        F  P  + L S+ + +      M AK V FG++   KLVEGIN V +AV+VTLGP GRNVVL R +   P+IVNDG TIAR+I L +PE NVG RL+QEVA+ SD RAGDGT+T+ +MTQAIVN GL+ V SG NPV LR+GI  A+  L+++I  +++ V G++DL  VAT+++G     + ++GS+  +        G+T++E+  T  DE++ + G+ ++R G+ S Y+V D ER VCE+ KP++LVT+  +    ++IP++E + K+ EPL +VAE+   +ALS LVVNK+RG ++VC+++AP  G RRK +LQDIA+ATGAT++  ++G+ L  +T DMLG     V ++E TT+ T     + +A+ ++ ++KE    DN +D++K   RIAAL GG+A IKVGAATETELKDKKLRYEDALNSVR+A+EMG+ PGGG
Sbjct:    1 MAMRSKSNLVLLLLAVAQISSFAPP--IHLKSHVSNK--SPFMMAAKKVSFGEESRKKLVEGINQVANAVRVTLGPKGRNVVLER-NYGAPEIVNDGVTIARDISLEDPEHNVGARLVQEVAQKSDNRAGDGTTTATVMTQAIVNNGLRSVTSGANPVELRRGIKIASEFLIKQIKELSKPVNGIKDLNSVATIASG-----SAVMGSIISQAFEKVGETGSTVVEESQTLTDEVDFTEGLTIER-GYLSPYFVGDKERQVCEMLKPKILVTDRKIDQVNELIPLLESMVKSKEPLFIVAEDVTGEALSALVVNKMRGVLDVCAIKAPSFGDRRKAYLQDIAIATGATYVAEEVGISLDQVTDDMLGTCARLVVSKEGTTIVTDGAQAEAVAKRIEAIRKEKSSTDNQFDQEKCDERIAALGGGIARIKVGAATETELKDKKLRYEDALNSVRSALEMGIVPGGG 454          
BLAST of NO06G00840 vs. NCBI_GenBank
Match: CBJ29911.1 (chaperonin cpn60 [Ectocarpus siliculosus])

HSP 1 Score: 398.3 bits (1022), Expect = 3.600e-107
Identity = 215/439 (48.97%), Postives = 307/439 (69.93%), Query Frame = 0
Query:   43 PLASYATARRHG--SIQMMAKNVRFGDKGLDKLVEGINVVGDAVKVTLGPLGRNVVLSRVDEPYPQIVNDGATIAREIDLVNPEVNVGVRLIQEVAKTSDRRAGDGTSTSIIMTQAIVNQGLKYVKSGMNPVSLRKGIMGATNMLVERIPLVARKVTGVEDLEKVATVSTGGDKEMAKIIGSVFGRVDLDAKLGGATLLEDGNTSEDELEISSGMRLDRSGFESAYYVTDMERMVCELRKPRVLVTNYPLLHNYQMIPIMEEIAKTGEPLLVVAEETKDDALSLLVVNKLRGTVEVCSVRAPFAGARRKQFLQDIALATGATFIDSDLGMMLQTMTMDMLGVAESAVTTREHTTLRTSEIFDDIIAEHVKNLKKELDGCDNVYDEQKLQYRIAALTGGVAVIKVGAATETELKDKKLRYEDALNSVRTAIEMGVFPGGG 480
            P++S A  R     ++ M AK+V FG+    KL +GIN V DAVKVTLGP GRNVVL R     P+IVNDG TIAR+I++ N E NVGV+L+QEVA+ SD RAGDGT+TS ++TQ IVNQG++ V SG NPV LR+GI+ A+ M++E I  +A  V   EDL  VAT+++ G   M  II   F RV  D    G+T++E+  T  DE+E + G+ +DR G+ S Y+++D ER +CE + P++LVT+  +     +IP++E + +  EPLL++AE+   +ALS LVVNK+RG ++V +V+AP  G RRK +LQDIA+ATG+T++  ++G+ L  + ++MLG A+  V  +E TT+ +    D+ +   +K ++K+ +  D+ +D++K   R+AAL GG+A IKVGAATETELKDKKLRYEDALNSVR+A+E+G+ PGGG
Sbjct:   57 PVSSLAGRRSRAGTALSMGAKSVVFGEDARKKLADGINAVADAVKVTLGPKGRNVVLERA-YGAPEIVNDGVTIARDIEVENHEENVGVKLVQEVAQKSDNRAGDGTTTSTLLTQEIVNQGMRLVTSGANPVELRQGILAASGMIIEEIKKLAVPVGKNEDLLNVATIAS-GSSTMGGIIAKAFERVG-DT---GSTVVEESQTLGDEVEFTEGLTIDR-GYLSPYFISDQERSLCEFKNPKILVTDKKIDQVNDLIPLLEAMVQAKEPLLIMAEDVVGEALSALVVNKMRGVLDVVAVKAPSFGERRKNYLQDIAIATGSTYVAEEVGLTLDQVKIEMLGTADRIVVMKEQTTIVSDGRNDEAVKARIKTIRKDAETSDSAFDKEKADERVAALGGGIARIKVGAATETELKDKKLRYEDALNSVRSALELGIVPGGG 488          
BLAST of NO06G00840 vs. NCBI_GenBank
Match: XP_001712532.1 (cpn60 [Hemiselmis andersenii] >ABW98207.1 cpn60 [Hemiselmis andersenii])

HSP 1 Score: 397.5 bits (1020), Expect = 6.200e-107
Identity = 203/425 (47.76%), Postives = 301/425 (70.82%), Query Frame = 0
Query:   55 SIQMMAKNVRFGDKGLDKLVEGINVVGDAVKVTLGPLGRNVVLSRVDEPYPQIVNDGATIAREIDLVNPEVNVGVRLIQEVAKTSDRRAGDGTSTSIIMTQAIVNQGLKYVKSGMNPVSLRKGIMGATNMLVERIPLVARKVTGVEDLEKVATVSTGGDKEMAKIIGSVFGRVDLDAKLGGATLLEDGNTSEDELEISSGMRLDRSGFESAYYVTDMERMVCELRKPRVLVTNYPLLHNYQMIPIMEEIAKTGEPLLVVAEETKDDALSLLVVNKLRGTVEVCSVRAPFAGARRKQFLQDIALATGATFIDSDLGMMLQTMTMDMLGVAESAVTTREHTTLRTSEIFDDIIAEHVKNLKKELDGCDNVYDEQKLQYRIAALTGGVAVIKVGAATETELKDKKLRYEDALNSVRTAIEMGVFPGGG 480
            +++MMAK V FG++    LV GIN V DAVK+TLGP GRNVVL R     PQ++NDG TIAR+I+L NP  N G RL+QEVA  +D +AGDGT+TS ++TQ+IV QG+K V SG+NP++L++GI   +  LV+ I  +A+   G+ED+  +AT++ GG++E+ +II + F +V  +    G+T +E+  + +DE++ + GM LDR G+ S Y+V DMER + EL  PRV+VT+  +    +++P++E + +  EP+L+VAE+   +ALS LVVNK+RG ++VC++RAP  G R+K +L+DIA+ TGAT++  ++G+ L  +T + LG A   V  +E  T+ +SE   + +   ++ +KK+++  D+ +D +K + RIA L GG+A IKVGAATETELKDKKLRYEDA+NS + AIEMGV PGGG
Sbjct:   61 NVKMMAKRVVFGEESRKSLVNGINAVADAVKITLGPKGRNVVLER-QMGSPQVINDGVTIARDIELENPLENTGARLLQEVASKTDLKAGDGTTTSTVLTQSIVTQGIKAVTSGVNPLALKRGIEKTSKFLVKEIKNLAKPCDGIEDIRNIATIAAGGNEEIGRIISTAFEKVGEN----GSTTVEESQSLQDEVDFTEGMELDR-GYISPYFVKDMERQIAELINPRVVVTDKKITSVQELVPLLEMVVRLKEPVLIVAEDITSEALSTLVVNKMRGVLDVCAIRAPGFGERKKAYLEDIAILTGATYLAEEVGLTLDKVTNEQLGKANRVVVAKEACTIISSEANQEKVNARIEIIKKQIENTDSEFDIEKGEERIARLGGGIARIKVGAATETELKDKKLRYEDAINSTKAAIEMGVTPGGG 479          
BLAST of NO06G00840 vs. NCBI_GenBank
Match: XP_009038899.1 (hypothetical protein AURANDRAFT_72012 [Aureococcus anophagefferens] >EGB06320.1 hypothetical protein AURANDRAFT_72012 [Aureococcus anophagefferens])

HSP 1 Score: 396.0 bits (1016), Expect = 1.800e-106
Identity = 209/427 (48.95%), Postives = 299/427 (70.02%), Query Frame = 0
Query:   57 QMMAKNVRFGDKGLDKLVEGINVVGDAVKVTLGPLGRNVVLSRVDEPYPQIVNDGATIAREIDLVNPEVNVGVRLIQEVAKTSDRRAGDGTSTSIIMTQAIVNQGLKYVKSGMNPVSLRKGIMGATNMLVERIPLVARKVTGVEDLEKVATVSTGGDKEMAKIIGSVFGRVDLDAKLGGATLLEDGNTSEDELEISSGMRLDRSGFESAYYVTDMERMVCELRKPRVLVTNYPLLHNYQMIPIMEEIAKTGEPLLVVAEETKDDALSLLVVNKLRGTVEVCSVRAPFAGARRKQFLQDIALATGATFIDSDLGMMLQTMTMDMLGVAESAVTTREHTTLRTSEIFDDIIAEHVKNLKKELDGCDNVYDEQKLQYRIAALTGGVAVIKVGAATETELKDKKLRYEDALNSVRTAIEMGVFPGGGQRLS 484
            ++ AK V FGD    +LV GIN V DAVKVTLGP GRNVVL R     P+IVNDG TIAR+I+L +P +N+G +LIQEVA  SD +AGDGT+TS ++TQ +VNQG+K V SG+NPV+LR+G+  AT+ L+  +  +A+ V   ++L  +ATV+T G+  M  II   F +V  D    G+T +E+  T  DE+E + G+ +DR G+ S Y+V D ER +CE+  P++LVT+  + +   +IP++E   KT E L+++AE+   +ALS LVVNK+RG ++V +++AP  G RRK  LQDIA+ATGAT++  ++G+ L T+T +MLG  E  V  +E TT+ T     D + + +  +K E +  D+++D++K + R+AAL GG+A IKVGAATETELKDKKLRYEDALN+V++A++MG+ PGGG  LS
Sbjct:   28 KLEAKKVLFGDASRAQLVAGINAVADAVKVTLGPKGRNVVLERA-YGAPEIVNDGVTIARDIELDDPAMNIGAKLIQEVASKSDSKAGDGTTTSTLLTQELVNQGMKAVSSGVNPVALRRGMSKATDALIVEVTALAKPVDSNDELLNIATVATSGNAVMGAIIAKAFEKVG-DT---GSTTMEESQTLTDEVEFTEGLTIDR-GYVSPYFVNDQERQLCEMLDPKILVTDQKIENVNDLIPLLEACVKTKERLVIIAEDVVGEALSALVVNKMRGVLDVVAIKAPGFGTRRKDLLQDIAIATGATYVAQEVGVALDTVTPEMLGTCERIVVGKEETTIITDGKQADAMEKRIAQIKLEAENTDSMFDKEKAEERVAALGGGIARIKVGAATETELKDKKLRYEDALNAVKSALKMGILPGGGSTLS 448          
BLAST of NO06G00840 vs. NCBI_GenBank
Match: AFP65287.1 (60 kDa heat shock protein, CPN60 protein (nucleomorph) [Chroomonas mesostigmatica CCMP1168])

HSP 1 Score: 394.4 bits (1012), Expect = 5.200e-106
Identity = 201/423 (47.52%), Postives = 300/423 (70.92%), Query Frame = 0
Query:   57 QMMAKNVRFGDKGLDKLVEGINVVGDAVKVTLGPLGRNVVLSRVDEPYPQIVNDGATIAREIDLVNPEVNVGVRLIQEVAKTSDRRAGDGTSTSIIMTQAIVNQGLKYVKSGMNPVSLRKGIMGATNMLVERIPLVARKVTGVEDLEKVATVSTGGDKEMAKIIGSVFGRVDLDAKLGGATLLEDGNTSEDELEISSGMRLDRSGFESAYYVTDMERMVCELRKPRVLVTNYPLLHNYQMIPIMEEIAKTGEPLLVVAEETKDDALSLLVVNKLRGTVEVCSVRAPFAGARRKQFLQDIALATGATFIDSDLGMMLQTMTMDMLGVAESAVTTREHTTLRTSEIFDDIIAEHVKNLKKELDGCDNVYDEQKLQYRIAALTGGVAVIKVGAATETELKDKKLRYEDALNSVRTAIEMGVFPGGG 480
            QMMAK V F ++    LV GIN V +AVK+TLGP GRNVVL R     PQ++NDG TIAR+I+L +P  N G RL+QEVA  +D +AGDGT+TS ++TQ+IVNQG+K V SG+NP++L++GI   + +LV+ I  +AR   G+ED+  +AT++ GG++E+ +II + F +V  +    G+T +E+  + +DE++ + GM LDR G+ S Y+V DMER + EL  PR++VT+  +    +++P++E + ++ E LL+VAE+   +ALS LVVNK+RG ++VC++R+P  G RRK +L+DIA+ TGAT+I  ++G+ L  +++D LG A   V  +E  T+ + +   + +   ++ +KK+++  D+ +D +K + RIA L GG+A IKVGAATETELKDKKLRYEDA+NS + AIEMGV PGGG
Sbjct:   66 QMMAKRVVFSEESRKSLVNGINAVANAVKITLGPKGRNVVLERT-LGSPQVINDGVTIARDIELEDPLENTGARLLQEVASKTDLKAGDGTTTSTVLTQSIVNQGIKAVASGVNPLALKRGIEKTSRLLVKEIKTLARPCNGIEDIRNIATIAAGGNEEIGRIIATAFEKVGEN----GSTTVEESQSLQDEVDFTEGMELDR-GYISPYFVKDMERQIAELIDPRIVVTDKKITSVQELVPLLEMVVRSKESLLIVAEDITGEALSTLVVNKMRGVLDVCAIRSPGFGERRKAYLEDIAILTGATYIAEEVGLTLDKISIDQLGKATRVVVAKEACTIISDKASQEKVNARIEQIKKQIENTDSDFDREKGEERIARLGGGIARIKVGAATETELKDKKLRYEDAINSTKAAIEMGVTPGGG 482          
BLAST of NO06G00840 vs. NCBI_GenBank
Match: XP_003239906.1 (60 kDa heat shock protein, CPN60 protein [Cryptomonas paramecium] >AEA39008.1 60 kDa heat shock protein, CPN60 protein [Cryptomonas paramecium])

HSP 1 Score: 392.9 bits (1008), Expect = 1.500e-105
Identity = 201/429 (46.85%), Postives = 298/429 (69.46%), Query Frame = 0
Query:   59 MAKNVRFGDKGLDKLVEGINVVGDAVKVTLGPLGRNVVLSRVDEPYPQIVNDGATIAREIDLVNPEVNVGVRLIQEVAKTSDRRAGDGTSTSIIMTQAIVNQGLKYVKSGMNPVSLRKGIMGATNMLVERIPLVARKVTGVEDLEKVATVSTGGDKEMAKIIGSVFGRVDLDAKLGGATLLEDGNTSEDELEISSGMRLDRSGFESAYYVTDMERMVCELRKPRVLVTNYPLLHNYQMIPIMEEIAKTGEPLLVVAEETKDDALSLLVVNKLRGTVEVCSVRAPFAGARRKQFLQDIALATGATFIDSDLGMMLQTMTMDMLGVAESAVTTREHTTLRTSEIFDDIIAEHVKNLKKELDGCDNVYDEQKLQYRIAALTGGVAVIKVGAATETELKDKKLRYEDALNSVRTAIEMGVFPGGGQRLSTWGK 488
            MAK V FG++    LV GIN V DAVK+TLGP GRNVVL R +   PQ++NDG TIAR+I+L NP  N G RL+QEVA  +D +AGDGT+TS ++TQAI+++G+K V SG+NP++L++GI      LV+ I  ++    G+ D+  +AT++ GG++E+ KII   F +V  +    G+T +E+  + +DE++ + GM LDR G+ S Y++ D ER VCEL+ PR+LVT+  +    ++IPI+E I K+ EPLL++A++   +ALS LVVNK+RG ++VC++++P  G R+K +L+D+A+ TGAT++  + G+ L  +T+D LG A   +  +E  T+ +  +  D I   ++ +K ++   D+ ++++K Q RIA L GGVA IK+GAATETELKDKKLRYEDA+NS + AIEMG+ PGGG  L T  K
Sbjct:   48 MAKKVTFGEESRKLLVNGINTVADAVKITLGPKGRNVVLER-NFGIPQVINDGVTIARDIELENPMENTGARLLQEVATKTDLKAGDGTTTSTVLTQAIISKGIKAVASGINPLALKRGIEKTCRFLVKEIKDLSYPCNGINDIRNIATIAAGGNEEIGKIISMAFEKVGEN----GSTTVEESQSLQDEIDFTEGMELDR-GYISPYFIKDTERQVCELKNPRILVTDKKISSIQELIPILETIVKSKEPLLIIADDVTGEALSTLVVNKMRGIIDVCAIKSPGFGERKKYYLEDVAILTGATYVAEEAGLALNKITIDQLGKANRVIIAKEMCTIVSDFVNRDKIQARIRQIKNQILNNDSDFEKEKGQERIARLGGGVARIKIGAATETELKDKKLRYEDAINSTKAAIEMGITPGGGSTLLTLTK 470          
BLAST of NO06G00840 vs. NCBI_GenBank
Match: OEU12386.1 (CPN60 protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 392.9 bits (1008), Expect = 1.500e-105
Identity = 217/440 (49.32%), Postives = 307/440 (69.77%), Query Frame = 0
Query:   46 SYATARRHG--SIQMMAKNVRFGDKGLDKLVEGINVVGDAVKVTLGPLGRNVVLSRVDEPYPQIVNDGATIAREIDLVNPEVNVGVRLIQEVAKTSDRRAGDGTSTSIIMTQAIVNQGLKYVKSGMNPVSLRKGIMGATNMLVERIPLVARKVTGVEDLEKVATVSTGGDKEMAKIIGSVFGRVDLDAKLGGATLLEDGNTSEDELEISSGMRLDRSGFESAYYVTDMERMVCELRKPRVLVTNYPLLHNYQMIPIMEEIAKTGEPLLVVAEETKDDALSLLVVNKLRGTVEVCSVRAPFAGARRKQFLQDIALATGATFIDSDLGMMLQTMTMDMLGVAESAVTTREHTTLRTSEIFDDIIAEHVKNLKKELDGCDNVYDEQKLQYRIAALTGGVAVIKVGAATETELKDKKLRYEDALNSVRTAIEMGVFPGGGQRLS 484
            ++A +++ G  ++ + AK V F +     LV+GIN V DAVKVTLGP GRNVVL R +   P+IVNDG TIAREI L +PE NVG +LIQEVA+ SD +AGDGT+TS IMTQAIVN G++ V SG+NPV+L +GI  A N++ E+I   A  VTG+EDL+ VAT+++ G  +M +II     +V       G+T++E+  T  DE+E + G+ +DR G+ S Y+V D ER + EL  PR+LVT+  + +   ++P++E++ K+ +PLL++AE+   +ALS LVVNK+RG ++V +++AP  G RR+++ QDIA+ATGA+F+  +LG+ L ++T+DMLG A+  V  +E TT+ T       I   +  L++E D  D  +D+ K   RIA+L GG+A IKVGAATETELKDKKLRYEDALNSV +A E+GV PGGG  L+
Sbjct:   20 AFAPSQKFGKSAVVLEAKKVSFREDSRRALVKGINQVADAVKVTLGPKGRNVVLER-NYGAPEIVNDGVTIAREIILRDPEENVGAKLIQEVAQKSDSKAGDGTTTSTIMTQAIVNNGMRAVTSGINPVALNRGIRKAGNLVSEKIKFHASPVTGIEDLKNVATIAS-GSVDMGRIIAQAADKVGET----GSTVVEESQTLFDEIEFTEGLTIDR-GYISPYFVKDQERQIGELVNPRILVTDAKIDNVNDVVPLLEQLVKSKDPLLIIAEDVTGEALSALVVNKMRGVLDVVAIKAPGFGNRRREYTQDIAIATGASFVAEELGITLDSVTLDMLGTADRIVVAKESTTIVTDGKHQKDIDARITQLRREADAADTDFDKDKFTERIASLGGGIARIKVGAATETELKDKKLRYEDALNSVDSARELGVVPGGGACLA 452          
The following BLAST results are available for this feature:
BLAST of NO06G00840 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26124.11.500e-21477.91chaperonin [Nannochloropsis gaditana][more]
EWM24977.13.300e-11651.30chaperonin [Nannochloropsis gaditana][more]
XP_002291674.13.200e-11148.92predicted protein [Thalassiosira pseudonana CCMP13... [more]
AFA52570.17.800e-11048.17chaperonin [Vaucheria litorea][more]
CBJ29911.13.600e-10748.97chaperonin cpn60 [Ectocarpus siliculosus][more]
XP_001712532.16.200e-10747.76cpn60 [Hemiselmis andersenii] >ABW98207.1 cpn60 [H... [more]
XP_009038899.11.800e-10648.95hypothetical protein AURANDRAFT_72012 [Aureococcus... [more]
AFP65287.15.200e-10647.5260 kDa heat shock protein, CPN60 protein (nucleomo... [more]
XP_003239906.11.500e-10546.8560 kDa heat shock protein, CPN60 protein [Cryptomo... [more]
OEU12386.11.500e-10549.32CPN60 protein [Fragilariopsis cylindrus CCMP1102][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000367NSK000367Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G00840.1NO06G00840.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100014g40gene4401Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G00840.1NO06G00840.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G00840 ID=NO06G00840|Name=NO06G00840|organism=Nannochloropsis oceanica|type=gene|length=2174bp
AACAGGGGAGCACCATGACCACAAAGTCATTGTCACCAACGTCTACGCCC
TTGTCGATGGCGGGGCGGCTCCTGGCCTTGCTTTTCTTGCTGATTTCATG
CAGCCTCCCCACTCTTGGCTTCCTGCAGCCTCCAAGGGTCCCTCTGGCCT
CATATGCGACGGCAAGACGACACGGCAGCATCCAGATGATGGCCAAGAAT
GTGCGGTTTGGGGACAAGGGTCTGGACAAATTGGTGGAGGGGATCAACGT
GGTGGGAGACGCGGTCAAGgtgcgtgacgtgtagagtatcttgcatgcac
acttgcgtgtgtgtcttgcatccttgctcccatgacaatagacaaggata
aagaggaagcacgggtgatatgaggctttacatcttcttggctacaaaat
ggtgatgtcctatcatcatcggcttttccccagccaccctacacagcccc
gctactttgcttttcgaactcagaacgtctgatctttctactttatcatt
tattatttctacaaatgaacaaaaattaatagGTAACACTAGGTCCCCTT
GGACGGAACGTGGTCCTCTCGCGGGTAGATGAGCCTTACCCTCAGATAGT
GAACGACGGCGCAACCATTGCCCGGGAAATTGACCTTGTTAACCCCGAGG
TCAATGTGGGCGTCCGACTGATACAAGAAGTGGCAAAGACGTCCGACCGA
CGGGCAGGAGATGGGACCAGCACATCTATCATTATGACCCAAGCCATTGT
CAACCAGGGGTTGAAATACGTCAAATCAGGCATGAATCCCGTCTCCCTTC
GCAAAGGAATCATGGGCGCCACCAACATGCTGGTCGAACGCATTCCCCTC
GTCGCCCGGAAGGTAACAGGAGTCGAAGACTTAGAAAAAGTCGCAACAGT
CTCAACGGGTGGGGACAAGGAGATGGCCAAGATCATTGGCAGCGTCTTTG
GGCGTGTCGATCTAGATGCGAAGCTAGGCGGAGCTACCCTCCTCGAGGAT
GGCAACACTAGTGAGGACGAGCTCGAGATCAGCTCTGGCATGCGCTTGGA
TCGATCAGGCTTCGAGTCTGCATATTATGTGACGGACATGGAGAGGATGG
TCTGTGAGCTGCGCAAGCCTCGTGTGCTGGTTACGAACTACCCCCTTCTC
CATAACTACCAAATGATACCAATCATGGAGGAAATCGCTAAGACTGGGGA
GCCCTTACTTGTTGTCGCCGAAGAGACAAAGGATGACGCCCTATCCCTCC
TGGTCGTCAATAAGCTGCGTGGTACCGTAGAAGTCTGCTCGGTCCGCGCT
CCCTTCGCCGGGGCTCGACGCAAGCAGTTTTTGCAAGATATTGCGTTGGC
CACGGGCGCTACGTTTATTGATTCCGATTTGGGAATGATGCTTCAGACAA
TGACTATGGACATGCTAGGCGTGGCCGAAAGCGCGGTCACTACCCGGGAA
CACACCACGTTGCGGACGTCGGAGATTTTTGATGACATCATCGCGGAGCA
CGTGAAGAACTTGAAGAAAGAGTTGGATGGGTGCGACAACGTGTACGACG
AACAAAAGCTGCAGTACCGCATCGCCGCACTCACGGGTGGTGTGGCCGTC
ATTAAGGTAGGAGCTGCCACCGAGACCGAGCTCAAGGACAAGAAGCTTCG
GTACGAAGACGCTCTTAATTCCGTGCGGACGGCGATTGAGATGGGGGTCT
TCCCCGGGGGGGGTCAGCGCTTGTCTACCTGGGGCAAAGCCTGCGGGAGG
AGATTTTGGCAGCGTTTCCCGATAAGGAAGAGAGAGCTGGGGCGGAGATT
ATGCTGAAAGCGATTGAGGAACCTGTACAGCAGATTGCACGAAACGCTGG
GATGTATCCGGGGAGGGTGCTGGAGAAGATAAAGATGAAGAATGAGTGGG
GCTTTGGCATGAATGCTGCGACGGGCAAGTATGAGAATTTGCTAGAGACG
GGCGTGCTGGACTCGGCGAGCGTGGTACTGAATGCGTTGACCAACTCAGC
CTCCATCGCGGGGTTGGTCTTGACGACACAAGTGGTTATTACCGAGAAGG
CGGAGGGCGCAATAAATCAAATGTAGGGACGGGTGGGAAAGGGGACAAGC
GGGGCATAATAATAGTGATTTACAACGACGGTGGCCTCACATCCGAAGTT
AACACAAAGCAAACAAGAAAATTT
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protein sequence of NO06G00840.1

>NO06G00840.1-protein ID=NO06G00840.1-protein|Name=NO06G00840.1|organism=Nannochloropsis oceanica|type=polypeptide|length=510bp
MTTKSLSPTSTPLSMAGRLLALLFLLISCSLPTLGFLQPPRVPLASYATA
RRHGSIQMMAKNVRFGDKGLDKLVEGINVVGDAVKVTLGPLGRNVVLSRV
DEPYPQIVNDGATIAREIDLVNPEVNVGVRLIQEVAKTSDRRAGDGTSTS
IIMTQAIVNQGLKYVKSGMNPVSLRKGIMGATNMLVERIPLVARKVTGVE
DLEKVATVSTGGDKEMAKIIGSVFGRVDLDAKLGGATLLEDGNTSEDELE
ISSGMRLDRSGFESAYYVTDMERMVCELRKPRVLVTNYPLLHNYQMIPIM
EEIAKTGEPLLVVAEETKDDALSLLVVNKLRGTVEVCSVRAPFAGARRKQ
FLQDIALATGATFIDSDLGMMLQTMTMDMLGVAESAVTTREHTTLRTSEI
FDDIIAEHVKNLKKELDGCDNVYDEQKLQYRIAALTGGVAVIKVGAATET
ELKDKKLRYEDALNSVRTAIEMGVFPGGGQRLSTWGKACGRRFWQRFPIR
KRELGRRLC*
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Synonyms
Publications