NO06G00520, NO06G00520 (gene) Nannochloropsis oceanica

Overview
NameNO06G00520
Unique NameNO06G00520
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1801
Alignment locationchr6:211838..213638 +

Link to JBrowse

Properties
Property NameValue
DescriptionProtoheme ix farnesyltransferase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:211838..213638 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008495protoheme IX farnesyltransferase activity
GO:0016765transferase activity, transferring alkyl or aryl (other than methyl) groups
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0048034heme O biosynthetic process
GO:0009987cellular process
GO:0009058biosynthetic process
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR006369Protohaem_IX_farnesylTrfase
IPR000537UbiA_prenyltransferase
Homology
BLAST of NO06G00520 vs. NCBI_GenBank
Match: EWM26139.1 (protoheme ix farnesyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 585.9 bits (1509), Expect = 1.200e-163
Identity = 312/440 (70.91%), Postives = 349/440 (79.32%), Query Frame = 0
Query:   57 IAPLTSGSSHLDAAA------SEGKVTPPSPSPIKEASGLRNVVGLCAELGKARLSALVVLTTSAGFLAAGGPVAWVPLTAVSVGTMLAACSANTFNQLIETGNDRLMKRTFLRPLPSGRASRPFAMAWGLGSAGASAAILAAGTTPLTIALGMGNLALYALPYTLSKTRSEINTWIGAVVGAVPPLMGWAAATECTSLATLLSTPDAMLLAGALFLWQFPHFFALSWVHRKDYARGGFKMVPCADPGGGRTAELIWRYSLYLAPLPLLATGMGVTGSMFALEGSFLNAYLVYLAGRFRKERTDERARAVFRCSLWYLPVLLGGFVFHSKQWDVEKVKE--GEEEMEGGMTMEALVAGARKQLTKVCVHEVLVQEGK--------NMHAGVLCPPVVAINVVEETKEVVGKVREEAEKVGGVQVHLTLSAPKSTGGGGRE 481
            + PL+S  S   A A        G V P     I + S +R + GLCAELGKARLSALVVLTTS+GFLAAGGPVAW+P TAVSVGTMLAACSANTFNQL+ET ND+ MKRT LRPLPSGRASRPFA+AW +GSAGASAA+L AGT PLT ALGMGNLALYALPYTLSKTRSE NTWIGA+VGAVPPLMGWAAAT+C SL +LLS+PDA+LLA  LFLWQFPHFFALSWVHRKDYARGGF+MVPCAD GG RTA+LIWRYSL LAPLP+LATG+GVTGSMFALEGS LN YL+YLA RF+ ERTDERARAVFRCSLWYLPVLLGGFVFHS+QWD E+V E  G       +++E  V+GARKQL KVCVHE+++QEGK            G+LCPPVVA +VVEETKEVV KV+ EAE      + + LS     GG  RE
Sbjct:    4 LLPLSSSYSSSKAVALVAGHQGRGPVVP----RIAKVSSIRQIAGLCAELGKARLSALVVLTTSSGFLAAGGPVAWLPFTAVSVGTMLAACSANTFNQLLETDNDKRMKRTHLRPLPSGRASRPFALAWAVGSAGASAAVLTAGTNPLTTALGMGNLALYALPYTLSKTRSEANTWIGALVGAVPPLMGWAAATDCASLTSLLSSPDAVLLASILFLWQFPHFFALSWVHRKDYARGGFQMVPCADSGGRRTADLIWRYSLCLAPLPVLATGLGVTGSMFALEGSALNLYLMYLARRFKSERTDERARAVFRCSLWYLPVLLGGFVFHSRQWDSERVTETVGNSGERNNLSVERWVSGARKQLAKVCVHEMMLQEGKVEQGGGRERREGGLLCPPVVAGHVVEETKEVVEKVKGEAE---ASAMRMPLSLRMGDGGVRRE 436          
BLAST of NO06G00520 vs. NCBI_GenBank
Match: CBN73843.1 (COX10 homolog, cytochrome c oxidase assembly protein [Ectocarpus siliculosus])

HSP 1 Score: 365.2 bits (936), Expect = 3.200e-97
Identity = 195/368 (52.99%), Postives = 250/368 (67.93%), Query Frame = 0
Query:   92 NVVGLCAELGKARLSALVVLTTSAGFLAAGGPVAWVPLTAVSVGTMLAACSANTFNQLIETGNDRLMKRTFLRPLPSGRASRPFAMAWGLGSAGASAAILAAGTTPLTIALGMGNLALYALPYTLSKTRSEINTWIGAVVGAVPPLMGWAAATECTSLATLLSTPDAMLLAGALFLWQFPHFFALSWVHRKDYARGGFKMVPCADPGGGRTAELIWRYSLYLAPLPLLATGMGVTGSMFALEGSFLNAYLVYLAGRFRKERTDERARAVFRCSLWYLPVLLGGFVFHSKQWDVEKVKEGEEEMEGGMTMEALVAGARKQLTKVCVHEVLVQEGKNMHAGVLCPPVVAINVVEETKEVVGKVREEAEKV 460
            +++ L ++L K RLSALV+ TTSAG+LAAGGPV  + LT+  VGTMLA+ SANTFNQ+IET ND  M RT  RPLPSGR SR  A+ WG+ S  A   +LAAG+ PLT  LG  NL LY  PYTLSKTRSEINTW+G+VVGAVPPLMGWAAAT        L   + +LLA  LF+WQFPHFF+L+W+HR+DYARGGF MVPCADP G RTA L+ RYS YL P+PL A  +  T  MFA+EG+  NAYL+Y A RF  ++++  AR VF+ SLW+LP +L  FVFHS++W++E   E E+       +  L+   R +LTK+C+HE++ ++     A   CP VV   V  E + +      + E +
Sbjct:   54 HLMKLYSQLSKHRLSALVMSTTSAGYLAAGGPVDALALTSACVGTMLASSSANTFNQVIETANDARMHRTRARPLPSGRISRQHALGWGVASGTAGITVLAAGSNPLTATLGAANLLLYVGPYTLSKTRSEINTWVGSVVGAVPPLMGWAAAT------GELVAVEPLLLATYLFMWQFPHFFSLAWLHREDYARGGFAMVPCADPTGSRTASLVTRYSWYLVPIPLAAAALDATSWMFAVEGTAFNAYLLYHAYRFDGDKSNANARGVFKASLWHLPAVLALFVFHSRRWELEDKAEDEQ-------LGTLIQRIRARLTKLCLHEIVQKD----EAASFCPVVVVEEVGAEAQNIATTAAHKEESL 404          
BLAST of NO06G00520 vs. NCBI_GenBank
Match: XP_008896069.1 (protoheme IX farnesyltransferase [Phytophthora parasitica INRA-310] >ETN18393.1 protoheme IX farnesyltransferase [Phytophthora parasitica INRA-310])

HSP 1 Score: 320.5 bits (820), Expect = 9.100e-84
Identity = 191/419 (45.58%), Postives = 258/419 (61.58%), Query Frame = 0
Query:   70 AASEGKVTPPSPSPIKEASGLRNVVGLCAELGKARLSALVVLTTSAGFLAAGGPVAWVPLTAVSVGTMLAACSANTFNQLIETGNDRLMKRTFLRPLPSGRASRPFAMAWGLGSAGASAAILAAGTTPLTIALGMGNLALYALPYTLSKTRSEINTWIGAVVGAVPPLMGWAAATECTSLATLLSTPDAMLLAGALFLWQFPHFFALSWVHRKDYARGGFKMVPCADPGGGRTAELIWRYSLYLAPLPLLATGMGVTGSMFALEGSFLNAYLVYLAGRFRKERTDERARAVFRCSLWYLPVLLGGFVFHSKQW----DVEKVKE---------GEEEM-----------EGGMT--MEALVAGARKQLTKVCVHEVL--VQEGKNM--HAGVLCPPVVAINVVEETKEVVGKVREEAEK 459
            AA+   +     +P+ +A  L+  + + ++LGKARLSALVV+TT AGFL AGGP++W    A +VGT LAA SANTFNQ  E   D  M+RT  RPLPSGR +RP A+A+G  +A AS AILAAG +PL  +LG  N+ LY+L YT  K +SE+NTW+G++VGA+PP+MGWAAAT      T+L+ P+A L A  L+ WQ PHFFALSW  RKDY RGG+KMV C DP G R+A L  RYS Y+  +P++A     T  MFA+EG+ +NAY +YLA +F  +  +  A+ VF  SLWYLPV++G  V HS+QW    ++E  KE         GE E            E  M+  + + V   R  L   C+HE L  V++G++    + VLCP    ++V  + KE V    + + K
Sbjct:   51 AAATAAIDAADVAPLGQAMTLKERLTIYSQLGKARLSALVVMTTGAGFLMAGGPISWSTFAAATVGTSLAAVSANTFNQCWEVELDAKMQRTHRRPLPSGRITRPHALAFGAATATASTAILAAGCSPLVASLGAFNIGLYSLVYTPMKMKSELNTWMGSIVGAIPPVMGWAAAT-----GTVLA-PEAALHAYLLYCWQMPHFFALSWRSRKDYGRGGYKMVACNDPTGSRSAALALRYSYYMGAIPIVAALTDATSYMFAVEGTVVNAYTIYLAHKFYAKPNNATAQKVFLASLWYLPVIMGCMVLHSQQWMDDEEIEAKKEANVWREAFLGEVENFQSQDPSAHFDESSMSAWLVSKVRAVRHSLRDFCIHESLWGVRDGQHNADESNVLCP----VHVGHQAKETVAITAQASRK 459          
BLAST of NO06G00520 vs. NCBI_GenBank
Match: ETP34176.1 (protoheme IX farnesyltransferase [Phytophthora parasitica P10297])

HSP 1 Score: 320.5 bits (820), Expect = 9.100e-84
Identity = 191/419 (45.58%), Postives = 258/419 (61.58%), Query Frame = 0
Query:   70 AASEGKVTPPSPSPIKEASGLRNVVGLCAELGKARLSALVVLTTSAGFLAAGGPVAWVPLTAVSVGTMLAACSANTFNQLIETGNDRLMKRTFLRPLPSGRASRPFAMAWGLGSAGASAAILAAGTTPLTIALGMGNLALYALPYTLSKTRSEINTWIGAVVGAVPPLMGWAAATECTSLATLLSTPDAMLLAGALFLWQFPHFFALSWVHRKDYARGGFKMVPCADPGGGRTAELIWRYSLYLAPLPLLATGMGVTGSMFALEGSFLNAYLVYLAGRFRKERTDERARAVFRCSLWYLPVLLGGFVFHSKQW----DVEKVKE---------GEEEM-----------EGGMT--MEALVAGARKQLTKVCVHEVL--VQEGKNM--HAGVLCPPVVAINVVEETKEVVGKVREEAEK 459
            AA+   +     +P+ +A  L+  + + ++LGKARLSALVV+TT AGFL AGGP++W    A +VGT LAA SANTFNQ  E   D  M+RT  RPLPSGR +RP A+A+G  +A AS AILAAG +PL  +LG  N+ LY+L YT  K +SE+NTW+G++VGA+PP+MGWAAAT      T+L+ P+A L A  L+ WQ PHFFALSW  RKDY RGG+KMV C DP G R+A L  RYS Y+  +P++A     T  MFA+EG+ +NAY +YLA +F  +  +  A+ VF  SLWYLPV++G  V HS+QW    ++E  KE         GE E            E  M+  + + V   R  L   C+HE L  V++G++    + VLCP    ++V  + KE V    + + K
Sbjct:   51 AAATAAIDAADVAPLGQAMTLKERLTIYSQLGKARLSALVVMTTGAGFLMAGGPISWSTFAAATVGTSLAAVSANTFNQCWEVELDAKMQRTHRRPLPSGRITRPHALAFGAATATASTAILAAGCSPLVASLGAFNIGLYSLVYTPMKMKSELNTWMGSIVGAIPPVMGWAAAT-----GTVLA-PEAALHAYLLYCWQMPHFFALSWRSRKDYGRGGYKMVACNDPTGSRSAALALRYSYYMGAIPIVAALTDATSYMFAVEGTVVNAYTIYLAHKFYAKPNNATAQKVFLASLWYLPVIMGCMVLHSQQWMDDEEIEAKKEANVWREAFLGEVENFQSQDPSAHFDESSMSAWLVSKVRAVRHSLRDFCIHESLWGVKDGQHNADESNVLCP----VHVGHQAKETVAITAQASRK 459          
BLAST of NO06G00520 vs. NCBI_GenBank
Match: XP_009521608.1 (hypothetical protein PHYSODRAFT_540850 [Phytophthora sojae] >EGZ26320.1 hypothetical protein PHYSODRAFT_540850 [Phytophthora sojae])

HSP 1 Score: 320.1 bits (819), Expect = 1.200e-83
Identity = 188/399 (47.12%), Postives = 250/399 (62.66%), Query Frame = 0
Query:   90 LRNVVGLCAELGKARLSALVVLTTSAGFLAAGGPVAWVPLTAVSVGTMLAACSANTFNQLIETGNDRLMKRTFLRPLPSGRASRPFAMAWGLGSAGASAAILAAGTTPLTIALGMGNLALYALPYTLSKTRSEINTWIGAVVGAVPPLMGWAAATECTSLATLLSTPDAMLLAGALFLWQFPHFFALSWVHRKDYARGGFKMVPCADPGGGRTAELIWRYSLYLAPLPLLATGMGVTGSMFALEGSFLNAYLVYLAGRFRKERTDERARAVFRCSLWYLPVLLGGFVFHSKQW----DVEKVKE---------GEEEM-----------EGGMT--MEALVAGARKQLTKVCVHEVL--VQEGKNM--HAGVLCPPVVAINVVEETKEVVGKVREEAEK 459
            L+  + + ++LGKARLSALVV+TT AGFL AGGP++W    A +VGT LAA SANTFNQ  E   D  M+RT  RPLPSGR SRP A+A+G  +A AS AILAAG +PL  +LG  N+ LY+L YT  K +SE NTW+G+VVGA+PP+MGWAAAT      T+++ P+A L A  ++ WQ PHFFALSW  RKDY RGG+KMV C DP G R+A L  RYS Y+  +P++A     T  MFA+EG+ +NAY +YLA +F  + ++  A+ VF  SLWYLPV++G  V HS+QW    +VE  KE         GE E            E  M+  + + V   R  L  +C+HE L  V++G++    + VLCP    ++V  + KE V    + + K
Sbjct:   74 LKERLAIYSQLGKARLSALVVMTTGAGFLMAGGPISWSTFAAATVGTSLAAASANTFNQCWEVELDAKMQRTHRRPLPSGRISRPHALAFGAATATASTAILAAGCSPLVASLGALNIGLYSLVYTPMKMKSEFNTWVGSVVGAIPPVMGWAAAT-----GTIMA-PEAALHAYLMYCWQMPHFFALSWRSRKDYGRGGYKMVACNDPTGSRSAALALRYSYYMGAIPIVAALTDATSYMFAVEGTVVNAYTIYLAHKFYAKPSNASAQKVFLASLWYLPVIMGCMVLHSQQWMDEEEVEAKKEANVWREAFLGEVENFQSTDPSATIDESSMSAWLVSKVRAVRHSLRDICIHESLWGVKDGQHHADESNVLCP----VHVGHQAKETVAITAQASRK 462          
BLAST of NO06G00520 vs. NCBI_GenBank
Match: OWZ04952.1 (Protoheme IX farnesyltransferase [Phytophthora megakarya])

HSP 1 Score: 320.1 bits (819), Expect = 1.200e-83
Identity = 196/432 (45.37%), Postives = 258/432 (59.72%), Query Frame = 0
Query:   57 IAPLTSGSSHLDAAASEGKVTPPSPSPIKEASGLRNVVGLCAELGKARLSALVVLTTSAGFLAAGGPVAWVPLTAVSVGTMLAACSANTFNQLIETGNDRLMKRTFLRPLPSGRASRPFAMAWGLGSAGASAAILAAGTTPLTIALGMGNLALYALPYTLSKTRSEINTWIGAVVGAVPPLMGWAAATECTSLATLLSTPDAMLLAGALFLWQFPHFFALSWVHRKDYARGGFKMVPCADPGGGRTAELIWRYSLYLAPLPLLATGMGVTGSMFALEGSFLNAYLVYLAGRFRKERTDERARAVFRCSLWYLPVLLGGFVFHSKQW----DVEKVKE---------GEEEM-----------EGGMT--MEALVAGARKQLTKVCVHEVL--VQEGKNM--HAGVLCPPVVAINVVEETKEVVGKVREEAEK 459
            +A  TS  +   A      V P     +KE       + + ++LGKARLSALVV+TT AGFL AGGP++W    A +VGT LAA SANTFNQ  E   D  M+RT  RPLPSGR +RP A+A+G  +A AS AILAAG +PL  +LG  N+ LYAL YT  K +SE NTW+G+VVGA+PP+MGWAAAT      T+L+ P+A L A  ++ WQ PHFFALSW  RKDY RGG+KMV C DP G R+A L  RYS Y+  +P++A     T  MFA+EG+ +NAY +YLA +F  + ++  A+ VF  SLWYLPV++G  V HS+QW    +VE  KE         GE E            E  M+  + + V   R  L   C+HE L  V++G++    + VLCP    ++V  + KE V    + + K
Sbjct:   38 VAAATSSKAAATAVIDAADVAPLQAMTVKER------LTIYSQLGKARLSALVVMTTGAGFLMAGGPISWSTFAAATVGTSLAAASANTFNQCWEVELDAKMQRTHRRPLPSGRITRPHALAFGAATATASTAILAAGCSPLVASLGALNIGLYALVYTPMKMKSEFNTWVGSVVGAIPPVMGWAAAT-----GTILA-PEAALHAYLMYCWQMPHFFALSWRSRKDYGRGGYKMVACNDPTGSRSAALALRYSYYMGAIPIVAALTDATSYMFAVEGTVVNAYTIYLAHKFYNKPSNASAQKVFLASLWYLPVIMGCMVLHSQQWMDDEEVENKKEANVWREAFLGEVENFQSQDPSAHFDESSMSAWLVSKVRAVRHSLRDHCIHETLWGVKDGQHNADESNVLCP----VHVGHQAKETVAITAQASRK 453          
BLAST of NO06G00520 vs. NCBI_GenBank
Match: ETI36215.1 (protoheme IX farnesyltransferase [Phytophthora parasitica P1569])

HSP 1 Score: 319.7 bits (818), Expect = 1.500e-83
Identity = 190/419 (45.35%), Postives = 258/419 (61.58%), Query Frame = 0
Query:   70 AASEGKVTPPSPSPIKEASGLRNVVGLCAELGKARLSALVVLTTSAGFLAAGGPVAWVPLTAVSVGTMLAACSANTFNQLIETGNDRLMKRTFLRPLPSGRASRPFAMAWGLGSAGASAAILAAGTTPLTIALGMGNLALYALPYTLSKTRSEINTWIGAVVGAVPPLMGWAAATECTSLATLLSTPDAMLLAGALFLWQFPHFFALSWVHRKDYARGGFKMVPCADPGGGRTAELIWRYSLYLAPLPLLATGMGVTGSMFALEGSFLNAYLVYLAGRFRKERTDERARAVFRCSLWYLPVLLGGFVFHSKQW----DVEKVKE---------GEEEM-----------EGGMT--MEALVAGARKQLTKVCVHEVL--VQEGKNM--HAGVLCPPVVAINVVEETKEVVGKVREEAEK 459
            AA+   +     +P+ +A  L+  + + ++LGKARLSALVV+TT AGFL AGGP++W    A +VGT LAA SANTFNQ  E   D  M+RT  RPLPSGR +RP A+A+G  +A AS AILAAG +PL  +LG  N+ LY+L YT  K +SE+NTW+G++VGA+PP+MGWAAAT      T+L+ P+A L A  ++ WQ PHFFALSW  RKDY RGG+KMV C DP G R+A L  RYS Y+  +P++A     T  MFA+EG+ +NAY +YLA +F  +  +  A+ VF  SLWYLPV++G  V HS+QW    ++E  KE         GE E            E  M+  + + V   R  L   C+HE L  V++G++    + VLCP    ++V  + KE V    + + K
Sbjct:   51 AAATAAIDAADVAPLGQAMTLKERLTIYSQLGKARLSALVVMTTGAGFLMAGGPISWSTFAAATVGTSLAAVSANTFNQCWEVELDAKMQRTHRRPLPSGRITRPHALAFGAATATASTAILAAGCSPLVASLGAFNIGLYSLVYTPMKMKSELNTWMGSIVGAIPPVMGWAAAT-----GTVLA-PEAALHAYLMYCWQMPHFFALSWRSRKDYGRGGYKMVACNDPTGSRSAALALRYSYYMGAIPIVAALTDATSYMFAVEGTVVNAYTIYLAHKFYAKPNNATAQKVFLASLWYLPVIMGCMVLHSQQWMDDEEIEAKKEANVWREAFLGEVENFQSQDPSAHFDESSMSAWLVSKVRAVRHSLRDFCIHESLWGVRDGQHNADESNVLCP----VHVGHQAKETVAITAQASRK 459          
BLAST of NO06G00520 vs. NCBI_GenBank
Match: ETK76469.1 (protoheme IX farnesyltransferase [Phytophthora parasitica] >ETL29907.1 protoheme IX farnesyltransferase [Phytophthora parasitica] >ETL83137.1 protoheme IX farnesyltransferase [Phytophthora parasitica] >ETM36360.1 protoheme IX farnesyltransferase [Phytophthora parasitica] >ETO64964.1 protoheme IX farnesyltransferase [Phytophthora parasitica P1976] >ETP06067.1 protoheme IX farnesyltransferase [Phytophthora parasitica CJ01A1])

HSP 1 Score: 319.7 bits (818), Expect = 1.500e-83
Identity = 190/419 (45.35%), Postives = 258/419 (61.58%), Query Frame = 0
Query:   70 AASEGKVTPPSPSPIKEASGLRNVVGLCAELGKARLSALVVLTTSAGFLAAGGPVAWVPLTAVSVGTMLAACSANTFNQLIETGNDRLMKRTFLRPLPSGRASRPFAMAWGLGSAGASAAILAAGTTPLTIALGMGNLALYALPYTLSKTRSEINTWIGAVVGAVPPLMGWAAATECTSLATLLSTPDAMLLAGALFLWQFPHFFALSWVHRKDYARGGFKMVPCADPGGGRTAELIWRYSLYLAPLPLLATGMGVTGSMFALEGSFLNAYLVYLAGRFRKERTDERARAVFRCSLWYLPVLLGGFVFHSKQW----DVEKVKE---------GEEEM-----------EGGMT--MEALVAGARKQLTKVCVHEVL--VQEGKNM--HAGVLCPPVVAINVVEETKEVVGKVREEAEK 459
            AA+   +     +P+ +A  L+  + + ++LGKARLSALVV+TT AGFL AGGP++W    A +VGT LAA SANTFNQ  E   D  M+RT  RPLPSGR +RP A+A+G  +A AS AILAAG +PL  +LG  N+ LY+L YT  K +SE+NTW+G++VGA+PP+MGWAAAT      T+L+ P+A L A  ++ WQ PHFFALSW  RKDY RGG+KMV C DP G R+A L  RYS Y+  +P++A     T  MFA+EG+ +NAY +YLA +F  +  +  A+ VF  SLWYLPV++G  V HS+QW    ++E  KE         GE E            E  M+  + + V   R  L   C+HE L  V++G++    + VLCP    ++V  + KE V    + + K
Sbjct:   51 AAATAAIDAADVAPLGQAMTLKERLTIYSQLGKARLSALVVMTTGAGFLMAGGPISWSTFAAATVGTSLAAVSANTFNQCWEVELDAKMQRTHRRPLPSGRITRPHALAFGAATATASTAILAAGCSPLVASLGAFNIGLYSLVYTPMKMKSELNTWMGSIVGAIPPVMGWAAAT-----GTVLA-PEAALHAYLMYCWQMPHFFALSWRSRKDYGRGGYKMVACNDPTGSRSAALALRYSYYMGAIPIVAALTDATSYMFAVEGTVVNAYTIYLAHKFYAKPNNATAQKVFLASLWYLPVIMGCMVLHSQQWMDDEEIEAKKEANVWREAFLGEVENFQSQDPSAHFDESSMSAWLVSKVRAVRHSLRDFCIHESLWGVKDGQHNADESNVLCP----VHVGHQAKETVAITAQASRK 459          
BLAST of NO06G00520 vs. NCBI_GenBank
Match: GAX95979.1 (protoheme IX farnesyltransferase [Pythium insidiosum])

HSP 1 Score: 317.8 bits (813), Expect = 5.900e-83
Identity = 185/393 (47.07%), Postives = 240/393 (61.07%), Query Frame = 0
Query:   98 AELGKARLSALVVLTTSAGFLAAGGPVAWVPLTAVSVGTMLAACSANTFNQLIETGNDRLMKRTFLRPLPSGRASRPFAMAWGLGSAGASAAILAAGTTPLTIALGMGNLALYALPYTLSKTRSEINTWIGAVVGAVPPLMGWAAATECTSLATLLSTPDAMLLAGALFLWQFPHFFALSWVHRKDYARGGFKMVPCADPGGGRTAELIWRYSLYLAPLPLLATGMGVTGSMFALEGSFLNAYLVYLAGRFRKERTDERARAVFRCSLWYLPVLLGGFVFHSKQW----------------------DVEKVKEGE------EEMEGGMTMEALVAGARKQLTKVCVHEVL--VQEGKNM--HAGVLCPPVVAINVVEETKEVVGKVREEAEK 459
            A+L K RLSALVV+TT AGFL AGGP++W    A +VGT LAA +ANTFNQ  E   DR M RT  RPLP G+ SR  A+A+G  +   S  ILAAG  PL  +L + N+ LY+L YT  KTRSE+NTW+G++VGA+PP+MGWAAAT  T+LA     P+A L A  LF WQ PHFFALSW  R DYARGG++MV C DP G R+A L  RYSLY+AP+P++A    VT  M+A+EG+ +NAY  YLA +F ++ ++  A+ VF CSLWYLPV++G  V HS+ W                      +VE  +  +      EE      + A V   R+ L  VC+HE L  V++GK+    + VLCP    ++V    KE V    + A K
Sbjct:   63 AQLSKVRLSALVVMTTGAGFLMAGGPISWGSFAAATVGTSLAAAAANTFNQAWEVELDRKMSRTCKRPLPLGKISRSHAVAFGAATTAVSTGILAAGCNPLVASLVLFNIGLYSLVYTPMKTRSELNTWVGSIVGAIPPIMGWAAATG-TALA-----PEAALQAYLLFAWQMPHFFALSWRSRNDYARGGYQMVACNDPSGSRSAALALRYSLYMAPIPIVAALTDVTSYMYAVEGTVVNAYATYLAYKFYQKPSNASAQKVFLCSLWYLPVMMGAMVLHSQNWLESEEREEKAQRNRVWREAFLGEVENFQSHDATAVSTEENSLSAYVVAKVRNLRQNLKDVCIHESLWGVKDGKHNADESSVLCP----VHVAGTAKETVELTAQAARK 445          
BLAST of NO06G00520 vs. NCBI_GenBank
Match: POM78387.1 (Protoheme IX farnesyltransferase [Phytophthora palmivora var. palmivora])

HSP 1 Score: 317.0 bits (811), Expect = 1.000e-82
Identity = 192/431 (44.55%), Postives = 259/431 (60.09%), Query Frame = 0
Query:   57 IAPLTSGSSHLDAAASEGKVTPPSPSPIKEASGLRNVVGLCAELGKARLSALVVLTTSAGFLAAGGPVAWVPLTAVSVGTMLAACSANTFNQLIETGNDRLMKRTFLRPLPSGRASRPFAMAWGLGSAGASAAILAAGTTPLTIALGMGNLALYALPYTLSKTRSEINTWIGAVVGAVPPLMGWAAATECTSLATLLSTPDAMLLAGALFLWQFPHFFALSWVHRKDYARGGFKMVPCADPGGGRTAELIWRYSLYLAPLPLLATGMGVTGSMFALEGSFLNAYLVYLAGRFRKERTDERARAVFRCSLWYLPVLLGGFVFHSKQW-DVEKVKEGEE----------EMEGGMTMEAL--------------VAGARKQLTKVCVHEVL--VQEGKNM--HAGVLCPPVVAINVVEETKEVVGKVREEAEK 459
            +A  TS  +   AA     V P     +K+       + + ++L KARLSALVV+TT AGFL AGGP++W    A +VGT LAA SANTFNQ  E   D  M+RT  RPLPSGR +R  A+A+G  SA AS AILAAG +PL  +LG+ N+ LYAL YT  K +SE NTW+G+VVGA+PP+MGWAAAT      T+L+ P+A L A  ++ WQ PHFFALSW  RKDY RGG+KMV C DP G R+A L  RYS Y+  +P++A     T  MFA+EG+ +NAY +YLA +F  + ++  A+ VF  SLWYLPV++G  V HS+QW D E+++  +E          E+E   + +A               V   R  L  +C+HE L  V++G++    + VLCP    ++V  + KE V    + + K
Sbjct:   41 VATATSTKAAATAAIDAADVAPLQTMTLKDR------LTIYSQLSKARLSALVVMTTGAGFLMAGGPISWSTFAAATVGTSLAAASANTFNQCWEVELDAKMQRTHRRPLPSGRITRSHALAFGAASATASTAILAAGCSPLVASLGVLNIGLYALVYTPMKMKSEFNTWVGSVVGAIPPVMGWAAAT-----GTILA-PEAALHAYLMYCWQMPHFFALSWRSRKDYGRGGYKMVACNDPTGSRSAALALRYSYYMGAIPIVAALTDATSYMFAVEGTVVNAYTIYLAHKFYAKPSNATAQKVFLASLWYLPVIMGCMVLHSQQWMDDEEIETKKEVNVWREAFLGEVENFQSKDAAHFDESSMSAWLVSKVRAVRHSLRDLCIHESLWGVKDGQHQADESNVLCP----VHVGHQAKETVAITAQASRK 455          
The following BLAST results are available for this feature:
BLAST of NO06G00520 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26139.11.200e-16370.91protoheme ix farnesyltransferase [Nannochloropsis ... [more]
CBN73843.13.200e-9752.99COX10 homolog, cytochrome c oxidase assembly prote... [more]
XP_008896069.19.100e-8445.58protoheme IX farnesyltransferase [Phytophthora par... [more]
ETP34176.19.100e-8445.58protoheme IX farnesyltransferase [Phytophthora par... [more]
XP_009521608.11.200e-8347.12hypothetical protein PHYSODRAFT_540850 [Phytophtho... [more]
OWZ04952.11.200e-8345.37Protoheme IX farnesyltransferase [Phytophthora meg... [more]
ETI36215.11.500e-8345.35protoheme IX farnesyltransferase [Phytophthora par... [more]
ETK76469.11.500e-8345.35protoheme IX farnesyltransferase [Phytophthora par... [more]
GAX95979.15.900e-8347.07protoheme IX farnesyltransferase [Pythium insidios... [more]
POM78387.11.000e-8244.55Protoheme IX farnesyltransferase [Phytophthora pal... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000397NSK000397Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G00520.1NO06G00520.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
COX10gene4431Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G00520.1NO06G00520.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G00520 ID=NO06G00520|Name=NO06G00520|organism=Nannochloropsis oceanica|type=gene|length=1801bp
ACCACAGGGAGGCGGTAGAGTGTGATGTGGAGACAACTCTCCCCCTCGTC
CGCCTCCTGCTGCAGGCTATTGTTAGCAGCATCGACGGCAGCAAGAAGAC
CACAACACCTTGCGTCGGCAACAAGCATCCGCCGCACCTCCTCTCCCTCC
TCCTCCTCATCATCATCATCTTTCACTCCTACACCCAAATCCATCGCGCC
CCTGACAAGTGGCAGCAGTCACCTCGACGCAGCTGCTTCGGAGGGGAAAG
TAACCCCGCCATCACCGTCGCCCATCAAGGAGGCGTCGGGCTTGAGAAAT
GTAGTGGGGCTGTGCGCGGAGCTGGGCAAGGCCCGACTCAGgtacgtttg
atgtgctaaaagcgaaggccggagagaggcatgcacggatggaaggagag
aagagcaagtagaagctctgctagggaggcagatgcatggttttatgcga
ggttgagacggacgctgccaaaatatctctctcgcctgcttttttttttc
cttccctcgtcaacgatcacttcatcccttgcccccctttcctctttcac
ccacttcatagCGCCCTCGTCGTTCTCACCACATCGGCCGGCTTTCTAGC
CGCTGGTGGACCTGTCGCCTGGGTCCCCCTGACAGCAGTGTCGGTGGGCA
CCATGCTTGCTGCATGCTCGGCCAACACCTTCAACCAACTCATCGAAACA
GGAAATGACCGGCTCATGAAACGCACCTTCCTCCGCCCTCTCCCCTCTGG
GCGTGCCTCGCGTCCTTTCGCCATGGCTTGGGGGCTAGGGAGTGCTGGGG
CCTCTGCTGCAATTCTAGCAGCAGGTACTACCCCTCTTACGATCGCCCTG
GGGATGGGTAATTTGGCACTGTACGCCTTGCCATACACGTTGAGCAAGAC
GAGGAGTGAGATCAACACATGGATAGGGGCGGTGGTGGGGGCAGTCCCCC
CCCTGATGGGTTGGGCGGCTGCGACGGAATGTACGAGCCTCGCGACCCTC
TTGTCAACTCCCGACGCCATGTTGCTCGCGGGAGCCTTGTTTTTGTGGCA
GTTTCCGCATTTCTTTGCCCTGTCCTGGGTGCATCGAAAGGACTATGCAA
GAGGGGGGTTTAAGATGGTGCCTTGTGCGGACCCCGGGGGGGGGAGGACG
GCCGAGTTGATCTGGCGCTATAGCCTATACTTGGCGCCCTTGCCCCTCCT
CGCCACAGGCATGGGGGTGACGGGGAGCATGTTCGCCTTGGAAGGGTCAT
TCTTGAATGCATACCTCGTATATTTGGCGGGGAGGTTCAGGAAGGAGCGG
ACGGATGAACGGGCACGGGCAGTATTCCGGTGTTCGTTGTGGTACTTGCC
TGTGCTGCTTGGAGGCTTTGTATTTCACAGCAAGCAGTGGGACGTGGAGA
AGGTGAAGGAGGGAGAGGAGGAGATGGAGGGCGGCATGACTATGGAGGCT
TTGGTGGCGGGGGCGAGGAAGCAGCTGACGAAGGTGTGTGTGCATGAGGT
GCTGGTACAGGAGGGGAAGAATATGCATGCGGGCGTGTTGTGTCCACCGG
TGGTGGCGATCAACGTGGTGGAAGAGACGAAAGAGGTCGTGGGGAAGGTG
AGGGAAGAGGCAGAGAAGGTGGGAGGAGTGCAGGTGCATTTGACGCTATC
GGCACCAAAGTCGACAGGAGGAGGAGGGAGGGAGTGAGGGGGTGAGGGGC
GAGGTTTTGGTGAATGTTTATATAATGAAGAGGGCAGGGCATAGACAGAC
GACGAGAGGCGAACAAGCGCAAGAAAGAAAGAAGCAAAGAAAACAGCCAG
A
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protein sequence of NO06G00520.1

>NO06G00520.1-protein ID=NO06G00520.1-protein|Name=NO06G00520.1|organism=Nannochloropsis oceanica|type=polypeptide|length=481bp
MWRQLSPSSASCCRLLLAASTAARRPQHLASATSIRRTSSPSSSSSSSSF
TPTPKSIAPLTSGSSHLDAAASEGKVTPPSPSPIKEASGLRNVVGLCAEL
GKARLSALVVLTTSAGFLAAGGPVAWVPLTAVSVGTMLAACSANTFNQLI
ETGNDRLMKRTFLRPLPSGRASRPFAMAWGLGSAGASAAILAAGTTPLTI
ALGMGNLALYALPYTLSKTRSEINTWIGAVVGAVPPLMGWAAATECTSLA
TLLSTPDAMLLAGALFLWQFPHFFALSWVHRKDYARGGFKMVPCADPGGG
RTAELIWRYSLYLAPLPLLATGMGVTGSMFALEGSFLNAYLVYLAGRFRK
ERTDERARAVFRCSLWYLPVLLGGFVFHSKQWDVEKVKEGEEEMEGGMTM
EALVAGARKQLTKVCVHEVLVQEGKNMHAGVLCPPVVAINVVEETKEVVG
KVREEAEKVGGVQVHLTLSAPKSTGGGGRE*
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Synonyms
Publications