NO06G00440, NO06G00440 (gene) Nannochloropsis oceanica

Overview
NameNO06G00440
Unique NameNO06G00440
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1164
Alignment locationchr6:189044..190207 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:189044..190207 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO06G00440 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G00440.1NO06G00440.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G00440.1NO06G00440.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G00440 ID=NO06G00440|Name=NO06G00440|organism=Nannochloropsis oceanica|type=gene|length=1164bp
ATGACTAAGGGCAGCTGCAGCAGCAGCCTTATAGACGGCGTGCCCATCGC
CCCTCTCATGCCCTCATCTGAGAATCCTCCCGTCCTGTCTCCTCCTGCTT
GTGCCTCCTCCCTCCCTCTCTCCGATCAATCACACTCCGTGCGGCACTCT
ACCACCGCTCCTCTCCCCCCTCCTCCCTCCCTCCCTCTTGCCCAAACCCC
CCCCCTGAGCCAGACTACCCGACCAGGCCCTGCCTCTCCCCCTCCCTCCC
ATCCCTCTCTCGACTCCTCTTTCCCCTCCTCCTCCTCCCTCACCGGGTTC
GATTCGCGCCACAATGCCTCCTCCCTCCCCCTCGACCTCGACGTTCTCTT
TGCCTCGGGTTTTCACGACAGCACCCACCACCTCTCCCTCCCTCTATCCT
CCTCCTCTTCCTCCCTCATCCTCCCTCATGCTTTGCCGCAACAGCAGAGA
GGGAAGGAAGGAGTGAAGGAAGGGGTGAAGGAGGGGGTGAAGGAAGGGGG
AGCCTCCCTACTCTTTCCTCTCACCCCTGTTTCGGCTGCTACCACTTTGC
CTGAGGGTGTGTCTTCTCTTTCTTCTTTTGAGGGAGGGGATGGAGGAGGG
AGGGAGGGGAGGAGGGAGGGAGGGGGCATTGTGGGAGGGCAGACTTTCTT
CTTCAACCATATAGCCATTGGTGGAAGGGCAGGAGGAGGAGACTTATTGT
TGCCACAGGCCACTCAGCAGCAGCAGCAGCAGCAGCAGCAGGCGACGTCC
TTTAATCCCTCCCTCCCTCCCTTCCTTGCTCCGGCCAAGCAGCAGCTAAT
TACATGTCGTAAACGCGATCGAGGCAGCGGAGACGGGGAACATGATCGTT
CCTTTTCTCCTTCCTCCATCCTTCCTTCGTCCTCCTCCACCACCACCTAT
CCCCTCTTTGGCTCTTACGGCAGCCTTGATCCTACCCATGTTCTTGCTTC
CTCCTCCACGTCCTCCTTCCCTTCCTCTCTCCCGCTCTCCAACCTCCAGG
CGCACTGCTTCTCGTCCTCGTCATACCTCTCTTCTGACCATTTCCACGGT
TCACCAATTTTGGGGGGGGGGACGACCGAGGGGAAGAAGGAGGGAGGGGG
GGAGAAGGAGAAAACAGTATTGGAAGTGGACAAGGGAAGGAAAGCGAAGA
AGCGTCGAGTTTGA
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protein sequence of NO06G00440.1

>NO06G00440.1-protein ID=NO06G00440.1-protein|Name=NO06G00440.1|organism=Nannochloropsis oceanica|type=polypeptide|length=388bp
MTKGSCSSSLIDGVPIAPLMPSSENPPVLSPPACASSLPLSDQSHSVRHS
TTAPLPPPPSLPLAQTPPLSQTTRPGPASPPPSHPSLDSSFPSSSSLTGF
DSRHNASSLPLDLDVLFASGFHDSTHHLSLPLSSSSSSLILPHALPQQQR
GKEGVKEGVKEGVKEGGASLLFPLTPVSAATTLPEGVSSLSSFEGGDGGG
REGRREGGGIVGGQTFFFNHIAIGGRAGGGDLLLPQATQQQQQQQQQATS
FNPSLPPFLAPAKQQLITCRKRDRGSGDGEHDRSFSPSSILPSSSSTTTY
PLFGSYGSLDPTHVLASSSTSSFPSSLPLSNLQAHCFSSSSYLSSDHFHG
SPILGGGTTEGKKEGGGEKEKTVLEVDKGRKAKKRRV*
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Synonyms
Publications