NO06G00420, NO06G00420 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G00420 vs. NCBI_GenBank
Match: EWM26148.1 (activating signal cointegrator 1 [Nannochloropsis gaditana] >EWM26149.1 activating signal cointegrator 1 [Nannochloropsis gaditana]) HSP 1 Score: 152.5 bits (384), Expect = 4.600e-33 Identity = 129/251 (51.39%), Postives = 155/251 (61.75%), Query Frame = 0 Query: 432 PSIRLLATACGGALAPADSEPGGEGGRGMGGE---ALRDRLLMFDLTMAERTRVYDDQADYFPGSSAGNMAWMDEKEXXXXXXXXXXXXXXVMGRKGRVEVSIDLAGRRVLVEEEGGREGGREVRKGGLGKEENKVAEEVARLRREYSGRERIVKGKGAGEGRRGREGV---MCGASQLSGRAQQVFEGLHTHFSRVKAANEAKKEKKSRREGEEDEGGDVLP--------SRIQTEFDRLVDEGEEGEED 669 P I L + A G LA + G E +RDRLL+FDL+MAERT+VYDDQADYFPG+S GNMAWMDEKE XXXXXXXXXXXXX GR+G +E+SIDLAGRRV +++ G G E G +G N+ AEEVARL E S G EG REG G S+LSGRA++VFEGLH HF R+K++N AK+ +K R+G EG D P SR+QT DRL D+ E ED Sbjct: 285 PPILLRSLAARGKLAVENESKEVREDVKDGSERADEMRDRLLVFDLSMAERTKVYDDQADYFPGTS-GNMAWMDEKECXXXXXXXXXXXXXXXGRRGPMELSIDLAGRRVFLQDSGIDTGKEESDAGRIG--TNEAAEEVARLAWELS-------TSGTLEGNYDREGARKGKSGVSRLSGRAREVFEGLHAHFGRIKSSNYAKEREK--RQG-HPEGEDAEPKAETFSSRSRVQTTSDRLHDDEEMEIED 522
BLAST of NO06G00420 vs. NCBI_GenBank
Match: WP_024124554.1 (DUF2103 domain-containing protein [Thermosynechococcus sp. NK55a] >AHB88146.1 protein of unknown function DUF2103 [Thermosynechococcus sp. NK55a]) HSP 1 Score: 91.3 bits (225), Expect = 1.300e-14 Identity = 45/96 (46.88%), Postives = 64/96 (66.67%), Query Frame = 0 Query: 40 TARLALNHSTHVEGLLPVLRRLIATLGPPDIYTIVPGRVAVTRGKAIHFRVRVSAPTPQGYKALARRGQTVQEVFITGSIGQAALQRALDAATSKE 136 T R+ LNHSTH+EGL+PVL +L G I T+ PG +A +GK+ H +RVS P G+K +ARRG+TVQEVF+ + +A L+ A+DA + + Sbjct: 5 TGRVVLNHSTHIEGLIPVLEKLAKVAG---IRTLTPGVIAPVKGKSPHLHLRVSVPIKGGFKVIARRGKTVQEVFVVTQLSEAELKAAIDAVLASK 97
BLAST of NO06G00420 vs. NCBI_GenBank
Match: WP_011057100.1 (hypothetical protein [Thermosynechococcus elongatus] >NP_682050.1 hypothetical protein tlr1260 [Thermosynechococcus elongatus BP-1] >BAC08812.1 tlr1260 [Thermosynechococcus elongatus BP-1]) HSP 1 Score: 90.9 bits (224), Expect = 1.600e-14 Identity = 45/96 (46.88%), Postives = 64/96 (66.67%), Query Frame = 0 Query: 40 TARLALNHSTHVEGLLPVLRRLIATLGPPDIYTIVPGRVAVTRGKAIHFRVRVSAPTPQGYKALARRGQTVQEVFITGSIGQAALQRALDAATSKE 136 T R+ LNHSTH+EGL+PVL +L G I T+ PG +A +GK+ H +RVS P G+K +ARRG+TVQEVF+ + +A L+ A+DA + + Sbjct: 10 TGRVVLNHSTHIEGLIPVLEKLAKVAG---ISTLTPGVIAPVKGKSPHLHLRVSVPIKGGFKVIARRGKTVQEVFVITQLSEAELKAAIDAVLASK 102
BLAST of NO06G00420 vs. NCBI_GenBank
Match: BAY51018.1 (hypothetical protein NIES2134_114000 [Thermosynechococcus vulcanus NIES-2134]) HSP 1 Score: 90.9 bits (224), Expect = 1.600e-14 Identity = 45/96 (46.88%), Postives = 64/96 (66.67%), Query Frame = 0 Query: 40 TARLALNHSTHVEGLLPVLRRLIATLGPPDIYTIVPGRVAVTRGKAIHFRVRVSAPTPQGYKALARRGQTVQEVFITGSIGQAALQRALDAATSKE 136 T R+ LNHSTH+EGL+PVL +L G I T+ PG +A +GK+ H +RVS P G+K +ARRG+TVQEVF+ + +A L+ A+DA + + Sbjct: 5 TGRVVLNHSTHIEGLIPVLEKLAKVAG---ISTLTPGVIAPVKGKSPHLHLRVSVPIKGGFKVIARRGKTVQEVFVITQLSEAELKAAIDAVLASK 97
BLAST of NO06G00420 vs. NCBI_GenBank
Match: PSO51045.1 (metal-binding protein [Cyanobacteria bacterium SW_9_44_58]) HSP 1 Score: 89.0 bits (219), Expect = 6.200e-14 Identity = 45/94 (47.87%), Postives = 62/94 (65.96%), Query Frame = 0 Query: 38 TATARLALNHSTHVEGLLPVLRRLIATLGPPDIYTIVPGRVAVTRGKAIHFRVRVSAPTPQGYKALARRGQTVQEVFITGSIGQAALQRALDAA 132 ++ RL NHSTH+EGL+P+L RLI G IYT+ PG ++ RG H ++RVS P GYK +AR G++VQEVFI + Q L+ ALD++ Sbjct: 4 SSQGRLVWNHSTHIEGLIPILERLITYQG---IYTVTPGVISRARGNCQHLKLRVSVPIRGGYKVIARHGKSVQEVFIITDLSQQELKSALDSS 94
BLAST of NO06G00420 vs. NCBI_GenBank
Match: ATS18521.1 (hypothetical protein BRW62_06865 [Synechococcus lividus PCC 6715]) HSP 1 Score: 88.2 bits (217), Expect = 1.100e-13 Identity = 44/90 (48.89%), Postives = 61/90 (67.78%), Query Frame = 0 Query: 39 ATARLALNHSTHVEGLLPVLRRLIATLGPPDIYTIVPGRVAVTRGKAIHFRVRVSAPTPQGYKALARRGQTVQEVFITGSIGQAALQRAL 129 AT R+ LNHSTH+EGL+PVL +L G I T+ PG +A +GK+ H +RVS P G+K +ARRG+TVQEVF+ + +A L+ A+ Sbjct: 8 ATGRVVLNHSTHIEGLIPVLEKLAKVAG---ITTLTPGVIAPVKGKSPHLHLRVSVPIKGGFKVIARRGKTVQEVFVVTHLSEAELKGAI 94
BLAST of NO06G00420 vs. NCBI_GenBank
Match: WP_106220058.1 (hypothetical protein [Aphanothece minutissima] >PSB38789.1 hypothetical protein C7B81_04350 [Aphanothece cf. minutissima CCALA 015]) HSP 1 Score: 87.4 bits (215), Expect = 1.800e-13 Identity = 49/93 (52.69%), Postives = 63/93 (67.74%), Query Frame = 0 Query: 41 ARLALNHSTHVEGLLPVLRRLIATLGPPDIYTIVPGRVAVTRGKAIHFRVRVSAPTPQGYKALARRGQTVQEVFITGSIGQAALQRALDAATS 134 ARL + HST+VEGL+P+LRRL ATL PDI TI P + RG+++ R+RVS+P G+K LARRG T QEVF+ + + LQ LD TS Sbjct: 2 ARLVITHSTYVEGLIPLLRRL-ATL--PDIDTITPAVITRVRGRSVGLRLRVSSPITGGHKLLARRGSTAQEVFVVTRLSRDQLQEELDRLTS 91
BLAST of NO06G00420 vs. NCBI_GenBank
Match: WP_006527808.1 (metal-binding protein (DUF2103) [Gloeocapsa sp. PCC 73106] >ELR99377.1 putative metal-binding protein (DUF2103) [Gloeocapsa sp. PCC 73106]) HSP 1 Score: 86.3 bits (212), Expect = 4.000e-13 Identity = 43/98 (43.88%), Postives = 61/98 (62.24%), Query Frame = 0 Query: 37 PTATARLALNHSTHVEGLLPVLRRLIATLGPPDIYTIVPGRVAVTRGKAIHFRVRVSAPTPQGYKALARRGQTVQEVFITGSIGQAALQRALDAATSK 135 P RL NHSTH+ GL+P+L +L P + TI PG + RG++ H R+RVS P GYK +AR+G+TVQEVFI ++ Q ++ A+D +K Sbjct: 4 PVKGGRLVWNHSTHIPGLIPILEKL---TNYPGVETITPGVIGRARGQSPHLRLRVSVPIRGGYKIIARQGKTVQEVFIITTLSQTEIEEAIDGIVNK 98
BLAST of NO06G00420 vs. NCBI_GenBank
Match: WP_096625065.1 (metal-binding protein [Calothrix sp. NIES-3974] >BAZ07782.1 hypothetical protein NIES3974_44470 [Calothrix sp. NIES-3974]) HSP 1 Score: 85.9 bits (211), Expect = 5.300e-13 Identity = 44/96 (45.83%), Postives = 61/96 (63.54%), Query Frame = 0 Query: 39 ATARLALNHSTHVEGLLPVLRRLIATLGPPDIYTIVPGRVAVTRGKAIHFRVRVSAPTPQGYKALARRGQTVQEVFITGSIGQAALQRALDAATSK 135 +T RL NHSTH+ GL+P+L RL G IYTI PG + +G + HF++R+S P G+KA+AR G++VQEVFI + Q L+ + A SK Sbjct: 5 STGRLVWNHSTHIAGLIPILERLCQNEG---IYTITPGVLGRVKGHSPHFQLRISVPIRGGFKAIARHGKSVQEVFIVTDLDQEQLEAMIQVAVSK 97
BLAST of NO06G00420 vs. NCBI_GenBank
Match: WP_036481715.1 (metal-binding protein [Myxosarcina sp. GI1]) HSP 1 Score: 84.7 bits (208), Expect = 1.200e-12 Identity = 42/91 (46.15%), Postives = 62/91 (68.13%), Query Frame = 0 Query: 38 TATARLALNHSTHVEGLLPVLRRLIATLGPPDIYTIVPGRVAVTRGKAIHFRVRVSAPTPQGYKALARRGQTVQEVFITGSIGQAALQRAL 129 ++ RL NHSTH+ GL+P+L +L+ G I T+ PGR+ RG++ H ++RVS P GYK +AR+G+TVQEVFI + Q AL++A+ Sbjct: 4 SSDGRLVWNHSTHLPGLIPILEKLVDCEG---IGTVTPGRIKTARGRSPHLKLRVSVPIRGGYKVIARQGKTVQEVFILTVLEQKALEKAI 91 The following BLAST results are available for this feature:
BLAST of NO06G00420 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G00420 ID=NO06G00420|Name=NO06G00420|organism=Nannochloropsis oceanica|type=gene|length=2360bpback to top protein sequence of NO06G00420.1 >NO06G00420.1-protein ID=NO06G00420.1-protein|Name=NO06G00420.1|organism=Nannochloropsis oceanica|type=polypeptide|length=673bpback to top Synonyms
Publications
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