NO06G00330, NO06G00330 (gene) Nannochloropsis oceanica

Overview
NameNO06G00330
Unique NameNO06G00330
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5087
Alignment locationchr6:141675..146761 +

Link to JBrowse

Properties
Property NameValue
DescriptionElongation factor 3
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:141675..146761 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0016887ATPase activity
GO:0005524ATP binding
GO:0016887ATPase activity
GO:0005524ATP binding
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold
IPR027417P-loop_NTPase
IPR015688Elongation_fac_3
IPR003439ABC_transporter-like
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
BLAST of NO06G00330 vs. NCBI_GenBank
Match: XP_008619646.1 (hypothetical protein SDRG_15257 [Saprolegnia diclina VS20] >EQC26925.1 hypothetical protein SDRG_15257 [Saprolegnia diclina VS20])

HSP 1 Score: 215.7 bits (548), Expect = 4.300e-52
Identity = 144/413 (34.87%), Postives = 212/413 (51.33%), Query Frame = 0
Query:  185 EPYAIALLRRVLTSYKGAKAVV-VIAEDTAKAIIAIMSSHGVRPVLQVIFDGMG-AYEWQVKEGSIRLLGVVVATACCAGRENVAKQLPDVILKLIDSLSDTRPTVKQAALQVFPRVCKVITNTDVEKIIPVVIQAYADPTKTEAALEAMSACSFIQVVDAPTLGLMLPILMRGMKERKALTKRTCGLIIGNMCKLVADPRDAAQFYPVLQXXXXXXXXXXXXXXXXXACNRALTNLTAVRGALRELKNHEEEKRRLLPHLHHAVQRVWSGGGSSKYEEIYD----YMCDVAVSLTEAGTTEREAWNDALAPYLSAFLTAEKGKAAALAAGEHFFTFCITGIEA-XXXXXXXXXXXXDVVNTEFSLGYGGKILLHNTRLWLKRGRRYGIVGKNGCGKTTLMRNIANGSLDGLP 591
            EPY   LL  VL  Y   K  V   A + AKAI+  ++ + +R +L  IF GM    +WQ KEG++ LL  +   A       V++ LPD+I    + + DTRP VK+AA  V  + C   +N D+E  IP +I   A+P +    +  +++ +F++ V+AP L +M P+L+RG+ E K   KR   +II NMCKLV +P +A  F P +                   C RA   L    G++ EL   E+E +     +   ++ +      +K  +I D    ++    + LT A   + E W++++ PYLSAFL   +G   A+  G  F   C    +              D+ + EFSL YGG ILL+N RL LK+G RYG+ G+NGCGK+TLMR IANG L+G P
Sbjct:  101 EPYLSPLLGNVLDGYADKKIQVRGPAAEAAKAIVDSVNHNAIRVLLPHIFGGMDRTKKWQTKEGALNLLAELADVASV----QVSRCLPDIIPNATEQMWDTRPEVKKAAHAVMIKACSTASNADIEPFIPALISCIANPAEVSECVHKLASTTFVKTVEAPALAIMEPLLVRGLNENKTSVKRQTAVIIDNMCKLVEEPAEALLFTPKVLPTLKRIIEAVADPECRDVCTRAHETLFMAAGSV-ELS--EDETKIEFDSILQTLKFILEKDAKAKKAKIDDATLNFVAGCGLYLTVARNFKPEEWSNSVKPYLSAFLA--EGDIPAITKG--FREKCYKDNKVKVAEDVVQEDEGEDLCDCEFSLAYGGMILLNNARLNLKKGHRYGLCGRNGCGKSTLMRAIANGQLEGFP 502          
BLAST of NO06G00330 vs. NCBI_GenBank
Match: CDS03584.1 (hypothetical protein LRAMOSA00986 [Lichtheimia ramosa])

HSP 1 Score: 210.7 bits (535), Expect = 1.400e-50
Identity = 145/449 (32.29%), Postives = 217/449 (48.33%), Query Frame = 0
Query:  148 LETAEGKSSSSTQARIRQGALLAVKSMCAEMGSGSWFEPYAIALLRRVLTSYKGAKAVV-VIAEDTAKAIIAIMSSHGVRPVLQVIFDGMG-AYEWQVKEGSIRLLGVVVATACCAGRENVAKQLPDVILKLIDSLSDTRPTVKQAALQVFPRVCKVITNTDVEKIIPVVIQAYADPTKTEAALEAMSACSFIQVVDAPTLGLMLPILMRGMKERKALTKRTCGLIIGNMCKLVADPRDAAQFYPVLQXXXXXXXXXXXXXXXXXACNRALTNLTAVRGALRELKNHEEEKRRLLPHLHHAVQRVWSGGGSSKYEEIY----DYMCDVAVSLTEAGTTEREAWNDALAPYLSAFLTAEKGKAAALAAGEHFFTFCITGIEAXXXXXXXXXXXXDVVNTEFSLGYGGKILLHNTRLWLKRGRRYGIVGKNGCGKTTLMRNIANGSLDGLP 591
            +++      +   A  RQGA+ A+K++      G   EPY +  +  +L      +A     A D AK ++  ++ H    ++  +  G+G + +WQ K  ++ LL  +V       ++     +PDVI  + D + DT+  VK+AA      +C ++ N D+E+ IP VI     P      +  + A +F+Q VDA TL +M+P+L RG+ ER    KR   LII NMCKLV DP  AA F P+L                     +AL  L  V  +  E+    ++  ++   +H  +         +K ++ Y     Y+CDVA++L  A    +  W  AL PY+ AFL+A  G A  LA+       C   +              D+ N EFSL YG KILL+ T L LKRGRRYG+ G NGCGK+TLMR IAN  ++G P
Sbjct:   75 IDSVNKNIGNKKNAGARQGAIAAIKAL-TNKSLGGQLEPYLVPFMTSLLELQADKQAATKQAAADAAKNLVVQVNEHATAILVPYLLQGLGNSCKWQTKILALSLLDELVKIK----KQAFFHTIPDVIPVVSDCMWDTKAEVKKAATATMGNICSLVENKDIERFIPAVIACINKPENVPETIHLLGATTFVQEVDAATLSIMVPLLSRGLAERATPIKRKSALIIDNMCKLVDDPEVAAPFLPLLLPALEKIQDVVADPECRGVVQKALATLKRVGTSNVEIFTKADKADKVTTVVHELL--------PAKVDDFYGVSVKYLCDVALALCVAKNFFKNTWIQALPPYVKAFLSA--GDAETLAS--KALDKCEEAV-TPKDPEEDDEEGEDLCNCEFSLAYGAKILLNRTSLRLKRGRRYGLCGHNGCGKSTLMRAIANEQVEGFP 505          
BLAST of NO06G00330 vs. NCBI_GenBank
Match: WP_054157810.1 (hypothetical protein [Rhizobium sp. AAP43] >KPF45338.1 hypothetical protein IP76_08595 [Rhizobium sp. AAP43])

HSP 1 Score: 209.5 bits (532), Expect = 3.100e-50
Identity = 142/426 (33.33%), Postives = 210/426 (49.30%), Query Frame = 0
Query:  170 AVKSMCAEMGSGSWFEPYAIALLRRVLTSYKGAKAVVVIAEDTA-KAIIAIMSSHGVRPVLQVIFDGMGAYEWQVKEGSIRLLGVVVATACCAGRENVAKQLPDVILKLIDSLSDTRPTVKQAALQVFPRVCKVITNTDVEKIIPVVIQAYADPTKTEAALEAMSACSFIQVVDAPTLGLMLPILMRGMKERKALTKRTCGLIIGNMCKLVADPRDAAQFYPVLQXXXXXXXXXXXXXXXXXA---CNRALTNL-TAVRGALRELKNHEEEKRRLLPHLHHAVQRVWSGGGSSKYEEIYDYMCDVAVSLTEAGTTEREAWNDALAPYLSAFLTAEKGKAAALAAGEHFFTFCITGIEAXXXXXXXXXXXXDVVNTEFSLGYGGKILLHNTRLWLKRGRRYGIVGKNGCGKTTLMRNIANGSLDGLP 591
            +++++ A    G   E + I+ L  VL +     A V  A D A  AI + ++ + V+  L  +F+ M   +WQ KE + + LG + A    A  E ++  LP+++  + + + D +PTV+ AA     + C  I N D+E  +P +I+    P++    +  +SA +F+Q VDA TL +++P+L+RG+ +R    +R   +II NM KLV DP DAA F   L                      C++ L ++ T+V  A    K   EE    L     A      G G+   EE   Y+  +A +L +    E   W   + PYL+ F     G A A A  + F   C    +A            D+ N EFSL YGGKILL+N RL LKRG+RYG+ G NG GK+TLMR IANG LDG P
Sbjct:   19 SLEALTAAASKGPAAEIHLISHLPAVLKATADKDAAVRAAADAAGLAITSALNRNAVKLALPALFEAMADPKWQTKEAATKFLGHLAA----ASPEQISVYLPEIVPVVTNCMVDLKPTVRNAATDALTKCCAAIGNRDIEPFVPHLIRCIGAPSEVPDCVHKLSATTFVQSVDARTLSILVPLLVRGLTDRTTPIRRKACVIIRNMAKLVDDPVDAANFVATLLPNVKYAMEGMSNPEAREVATDCHKILESINTSVEAA---PKATVEEVLAALNKAADAASVAIKGDGA---EEASRYVAGMAANLIDVKNFEEAEWTQTVVPYLAPF----SGDAGATAVCKEFHAACFQEAQAREMAPVEEEEGEDLCNCEFSLAYGGKILLNNARLHLKRGQRYGLCGPNGAGKSTLMRAIANGQLDGFP 430          
BLAST of NO06G00330 vs. NCBI_GenBank
Match: XP_020128426.1 (elongation factor 3 [Diplodia corticola] >OJD32166.1 elongation factor 3 [Diplodia corticola])

HSP 1 Score: 209.5 bits (532), Expect = 3.100e-50
Identity = 141/443 (31.83%), Postives = 224/443 (50.56%), Query Frame = 0
Query:  161 ARIRQGALLAVKSMCAEMGSGSWFEPYAIALLRRVLTSYKGAKAVVV--IAEDTAKAIIAIMSSHGVRPVLQVIFDGM-GAYEWQVKEGSIRLLGVVVATACCAGRENVAKQLPDVILKLIDSLSDTRPTVKQAALQVFPRVCKVITNTDVEKIIPVVIQAYADPTKTEAALEAMSACSFIQVVDAPTLGLMLPILMRGMKERKALTKRTCGLIIGNMCKLVADPRDAAQFYPVLQXXXXXXXXXXXXXXXXXACNRALTNLTAVRGALREL---KNHEEEKRRLLPHLHHAVQRVWSGGGSSKYEEIYDYMCDVAVSLTEAGTTEREAWNDALAPYLSAFLTAEKGKAAALAAGEHFFTFCITGIEAXXXXXXXXXXXXDVVNTEFSLGYGGKILLHNTRLWLKRGRRYGIVGKNGCGKTTLMRNIANGSLDGLPEGLKVQS 598
            A  R+ AL A+K++ +        EPY +ALL   LT+  G K V V   A+  A+AI+   +++ V+ V+  I D +  A +W  K   +  + ++   +    R  +  ++PD++  + +++ DT+  VK+AA     ++C++I+N D+E+ IP +I+  A P      +  + A +F+  V  PTL +M+P+L RG+ ER+   KR   +II NMCKLV DP   A F P L                     +A+  L+ V   + +    ++   +   +LP L      +     ++K+E IY+Y+  +A  L +   TE   W+   APY SA L  EK K AA    ++     + G               D+ N  FSL YG KILL+ T L LKRG+RYG++G NG GKTTLMR I N  L+G P+  +V++
Sbjct:   78 ALARERALDAIKAIASHSTVSPAVEPYLVALLPATLTAI-GDKMVPVKNAAQAAAEAIVQATNANAVKAVIPAIIDSLHSAQKWPEKMTDLACIELLAERS----RAQMGYRVPDLLPVVSEAMWDTKAEVKKAAYATMEKLCELISNKDIERFIPELIKCIAKPENVPETVHLLGATTFVSDVHEPTLAIMVPLLERGLVERETAIKRKSAVIIDNMCKLVEDPNIVASFLPRLYPALKKNHETLADPEAREKTKQAIDTLSRVGHIVDDKLPERSRSGDVATILPVLKSV---LGDKANNAKFEPIYEYISAIAGQLIDEKETEAAVWSANAAPYFSAILGEEKAKDAA----DNLRKKTLPGFVEADEVPSDEEEGEDLCNCTFSLAYGAKILLNQTHLRLKRGQRYGLLGPNGSGKTTLMRAINNEQLEGFPKQSEVKT 508          
BLAST of NO06G00330 vs. NCBI_GenBank
Match: XP_012200958.1 (hypothetical protein SPRG_20160 [Saprolegnia parasitica CBS 223.65] >KDO28384.1 hypothetical protein SPRG_20160 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 209.1 bits (531), Expect = 4.000e-50
Identity = 147/441 (33.33%), Postives = 222/441 (50.34%), Query Frame = 0
Query:  157 SSTQARIRQGALLAVKSMCAEMGSGSWFEPYAIALLRRVLTSYKGAKAVV-VIAEDTAKAIIAIMSSHGVRPVLQVIFDGMG-AYEWQVKEGSIRLLGVVVATACCAGRENVAKQLPDVILKLIDSLSDTRPTVKQAALQVFPRVCKVITNTDVEKIIPVVIQAYADPTKTEAALEAMSACSFIQVVDAPTLGLMLPILMRGMKERKALTKRTCGLIIGNMCKLVADPRDAAQFYPVLQXXXXXXXXXXXXXXXXXACNRALTNLTAVRGALRELKNHEEEKRRLLPHLHHAVQRVWSGGGSSKYEEIYD----YMCDVAVSLTEAGTTEREAWNDALAPYLSAFLTAEKGKAAALAAGEHFFTFCITGIEA-XXXXXXXXXXXXDVVNTEFSLGYGGKILLHNTRLWLKRGRRYGIVGKNGCGKTTLMRNIANGSLDGLP 591
            +ST A  RQ A + VK++  +    +  EPY   +L  VL  Y   K  V   A + AKAI+   + + +R +L  IF GM    +WQ K G++ L+  +           V++ LPD+I    + + DTRP VK+AA  V  + C   +N D+E  IP +I   A+P +    +  +++ +F++ V+AP L +M P+L+RG+ E K   KR   +II NMCKLV +P +A  F P +                   C RA   L    G++ EL   E+E +     +   ++ +      +K  +I D    ++    + LT A   + E W++++ PYL AFL   +G   A+  G  F   C    +              D+ + EFSL YGG ILL+N RL LK+G RYG+ G+NGCGK+TLMR IANG L+G P
Sbjct:   55 TSTDANHRQSACVVVKAIAEK--KVARLEPYVTPVLGNVLDLYTDKKMQVRGPAAEAAKAIVHATNRNAIRVLLPHIFGGMDRTKKWQTKAGALDLIHDLSE----LHPVQVSRCLPDIIPNATEQMWDTRPEVKKAAHAVMIKACSTASNADIEPFIPALISCIANPAEVSECVHKLASTTFVKTVEAPALAIMEPLLVRGLNENKTSVKRQTAVIIDNMCKLVEEPAEALLFTPKVLPTLKRIIEAVADPECRDVCTRAHETLFMAAGSV-ELS--EDETKIEFDSILQTLKFILEKDAKAKKVKIDDSTLNFVAGCGLYLTVARNFKPEDWSNSVKPYLGAFLA--EGDIPAITKG--FREKCYKDNKVKVAEDVVQEDEGEDLCDCEFSLAYGGMILLNNARLNLKKGHRYGLCGRNGCGKSTLMRAIANGQLEGFP 482          
BLAST of NO06G00330 vs. NCBI_GenBank
Match: KXZ41717.1 (hypothetical protein GPECTOR_307g838 [Gonium pectorale])

HSP 1 Score: 208.4 bits (529), Expect = 6.900e-50
Identity = 141/452 (31.19%), Postives = 223/452 (49.34%), Query Frame = 0
Query:  143 GIQTALETAEGKSSSSTQARIRQGALLAVKSMCAEMGSGSWFEPYAIALLRRVLTSYKGAK-AVVVIAEDTAKAIIAIMSSHGVRPVLQVIFDGMGAYEW-QVKEGSIRLLGVVVATACCAGRENVAKQLPDVILKLIDSLSDTRPTVKQAALQVFPRVCKVITNTDVEKIIPVVIQAYADPTKTEAALEAMSACSFIQVVDAPTLGLMLPILMRGMKERKALTKRTCGLIIGNMCKLVADPRDAAQFYPVLQXXXXXXXXXXXXXXXXXACNRALTNLTAVRGALRELKNHEEEKRRLLPHLHHAVQRVWSG--GGSSKYEEIYDYMCDVAVSLTEAGTTEREAWNDALAPYLSAFLTAEKGKAAALAAGEHFFTFCITGIEAXXXXXXXXXXXXDVVNTEFSLGYGGKILLHNTRLWLKRGRRYGIVGKNGCGKTTLMRNIANGSLDGLP 591
            G   AL+ A    +S+T    RQ  L A +++C  +G+ +  EP+   LL  VL      K  V   AE  AK++I+I+++H V  VL  +F+ M A +    KE ++ L+  +V+       + + + LPD++  +   ++D++ +VK+ A +     C ++ N D++ ++P++I++   PT+ +  +  ++A +F+Q V+AP L LM+P+L+RG++ER    KR   LI  NM KLV +P +A  F P L                      A   L  +    +E      +K   L  LH  +     G  G   +   + DY   +  +LT     + E WN  L  YL AF++ E     A    +     C   ++             ++ N EFSL YG KILL+N  L LKRGRRYG+ G NG GK+TLMR IANG +DG P
Sbjct:   60 GATAALKAAIEDKASAT---ARQAGLAAYQAVCETIGTAA--EPFVSPLLPAVLEQCGDKKPEVKAAAEAAAKSLISIINAHAVYTVLGYLFECMDAKKHPATKEAALNLVKDLVS----MHPKQITRALPDIVPAVSGCMNDSKQSVKEVAEECMKAACTLVCNRDIDNMVPLIIRSINHPTEVQDTVHKLAATTFVQQVEAPALALMVPLLLRGLRERVTAIKRKAALIADNMAKLVDNPAEAMVFLPRLMPEIEKVSAEAADPELRKVATGAQKTLQRIEQEGKEKLAKTLDKSAALKSLHDLLAASPDGKKGLVPEAYPVLDYAAALCANLTNNKNFDVEEWNKVLGAYLGAFVSKETLAPIAKTLSDK----CFAEVQVKSTEYFDDEEGDELCNCEFSLAYGAKILLNNAALRLKRGRRYGLCGPNGVGKSTLMRAIANGQVDGFP 498          
BLAST of NO06G00330 vs. NCBI_GenBank
Match: PSC72325.1 (elongation factor 3 [Micractinium conductrix])

HSP 1 Score: 208.4 bits (529), Expect = 6.900e-50
Identity = 141/426 (33.10%), Postives = 213/426 (50.00%), Query Frame = 0
Query:  170 AVKSMCAEMGSGSWFEPYAIALLRRVLTSYKGAKAVVVIAEDTA-KAIIAIMSSHGVRPVLQVIFDGMGAYEWQVKEGSIRLLGVVVATACCAGRENVAKQLPDVILKLIDSLSDTRPTVKQAALQVFPRVCKVITNTDVEKIIPVVIQAYADPTKTEAALEAMSACSFIQVVDAPTLGLMLPILMRGMKERKALTKRTCGLIIGNMCKLVADPRDAAQFYPVLQXXXXXXXXXXXXXXXXXA---CNRALTNL-TAVRGALRELKNHEEEKRRLLPHLHHAVQRVWSGGGSSKYEEIYDYMCDVAVSLTEAGTTEREAWNDALAPYLSAFLTAEKGKAAALAAGEHFFTFCITGIEAXXXXXXXXXXXXDVVNTEFSLGYGGKILLHNTRLWLKRGRRYGIVGKNGCGKTTLMRNIANGSLDGLP 591
            +++++ A  G G   E + I+ L  VL +     A V  A D A  AI++ ++ + V+  L  +F+ M   +WQ KE + + LG + +    A  E ++  LP+++  + + + D +PTV+ AA +   + C  I N D+E  +P +I+    P +    +  +SA +F+Q VDA TL +++P+L+RG+ +R    +R   +II NM KLV DP DAA F   L                      C++ L ++ T+V  A    K   +E    L     A      G G+   EE   Y+  +A +L +    E   W   + PYL+ F     G A A A  + F T C    ++            D+ N EFSL YGGKILL+N RL LKRG+RYG+ G NG GK+TLMR IANG LDG P
Sbjct:   19 SLEALTAAAGKGPAAEIHLISHLPAVLKATADKDASVRAAADAAGLAIMSTLNRNAVKLALPALFEAMADPKWQTKEAATKFLGHLAS----ASPEQISVYLPEIVPVVTNCMVDLKPTVRTAATEALTKCCTAIGNRDIEPFVPHLIRCIGAPGEVPDCVHKLSATTFVQSVDARTLSILVPLLVRGLTDRTTPIRRKACVIIRNMAKLVDDPVDAANFVATLLPNVKYAMEGMSNPEARDVATDCHKILESINTSVEAA---PKAQVDEVLVALNKAAEAASVAVKGDGA---EEAARYVAGMAANLIDVKNFEEGEWTQTVTPYLAPFC----GDAGAAALCKEFHTACFQEAQSREMAPVEEEEGEDLCNCEFSLAYGGKILLNNARLHLKRGQRYGLCGPNGSGKSTLMRAIANGQLDGFP 430          
BLAST of NO06G00330 vs. NCBI_GenBank
Match: OQR85222.1 (elongation factor 3 [Achlya hypogyna])

HSP 1 Score: 207.6 bits (527), Expect = 1.200e-49
Identity = 137/413 (33.17%), Postives = 208/413 (50.36%), Query Frame = 0
Query:  185 EPYAIALLRRVLTSYKGAKAVV-VIAEDTAKAIIAIMSSHGVRPVLQVIFDGMG-AYEWQVKEGSIRLLGVVVATACCAGRENVAKQLPDVILKLIDSLSDTRPTVKQAALQVFPRVCKVITNTDVEKIIPVVIQAYADPTKTEAALEAMSACSFIQVVDAPTLGLMLPILMRGMKERKALTKRTCGLIIGNMCKLVADPRDAAQFYPVLQXXXXXXXXXXXXXXXXXACNRALTNLTAVRGALRELKNHEEEKRRLLPHLHHAVQRVWSGGGSSKYEEIYD----YMCDVAVSLTEAGTTEREAWNDALAPYLSAFLTAEKGKAAALAAGEHFFTFCITGIEA-XXXXXXXXXXXXDVVNTEFSLGYGGKILLHNTRLWLKRGRRYGIVGKNGCGKTTLMRNIANGSLDGLP 591
            EPY   LL  VL  Y   K  V   A D AKA++   + + +R +L  IF  M    +WQ KEG++ LL  +   A       V++ LPD+I    + + DTRP VK+AA  V  + C   +N D+E  IP +I   A+P++    +  +++ +F++ V+AP L +M P+L+RG+ E K   KR   +II NMCKLV +P +A  F P +                   C RA   L    G+   ++  E+E +     +   ++ +      +K  ++ D    ++    + LT A   + E W+ ++ PY +AF+   +G   A+  G  F   C    +              D+ + EFSL YGG ILL+N RL LK+G RYG+ G+NGCGK+TLMR IANG L+G P
Sbjct:   95 EPYLTPLLGAVLDGYADKKIQVRGPAADAAKALVDTTNHNAIRVLLPHIFGAMDRTKKWQTKEGALNLLAELADVA----PVQVSRCLPDIIPNATEQMWDTRPEVKKAAHAVMIKACSTASNADIEPFIPALISCIANPSEVSECVHKLASTTFVKTVEAPALAIMEPLLVRGLNENKTAVKRQTAVIIDNMCKLVEEPAEALLFTPKVLPTLKRIIEAVADPECRDVCTRAHETLFMAAGS---VEISEDETKIEFDSILSTLKFILEKDPKTKKVKVDDATLNFVAGCGLYLTVARNFKPEEWSSSVKPYFAAFI--PEGDIPAITKG--FREKCYKDNKVKVAEDVVQEDEGEDLCDCEFSLAYGGMILLNNARLNLKKGHRYGLCGRNGCGKSTLMRAIANGQLEGFP 496          
BLAST of NO06G00330 vs. NCBI_GenBank
Match: EPZ31034.1 (Elongation factor 3-like protein [Rozella allomycis CSF55])

HSP 1 Score: 207.2 bits (526), Expect = 1.500e-49
Identity = 137/445 (30.79%), Postives = 223/445 (50.11%), Query Frame = 0
Query:  159 TQARIRQGALLAVKSMCAEMGSGSWFEPYAIALLRRVLTSYKGAKAVV-VIAEDTAKAIIAIMSSHGVRPVLQVIFDGM-GAYEWQVKEGSIRLLGVVVATACCAGRENVAKQLPDVILKLIDSLSDTRPTVKQAALQVFPRVCKVITNTDVEKIIPVVIQAYADPTKTEAALEAMSACSFIQVVDAPTLGLMLPILMRGMKERKALTKRTCGLIIGNMCKLVADPRDAAQFYPVLQXXXXXXXXXXXXXXXXXACNRALTNLTAVRGALRELKNHEEEKRRLLPHLHHAVQRVWSGGGSSKYEEI-YDYMCDVAVSLTEAGTTEREAWNDALAPYLSAFLTAEKGKAAALAAGEHFFTFCI---TGIEAXXXXXXXXXXXXDVVNTEFSLGYGGKILLHNTRLWLKRGRRYGIVGKNGCGKTTLMRNIANGSLDGLPEGLKVQS 598
            T   +RQGA   V+++  + G  S   PY + +L  VL +Y   ++VV   A+   +A++  +    V+ +L ++F+ M  + +WQ KE ++ +LG  V+     G + VA+ LP++I  L +++  T+  V+ AA      + K + N D+E+ +  +I   A P +    +  +S+ +FI+ VD PTL +M+P+L RG+KER  +  R   +IIGNMCKLV +P DA  F P L                     +A   L  V     E    E    + +  L   ++    G  +   E++  +++C++A +       E   W  ++ P++   LT E  K       + F    +      +             D+ N EFSL YGG ILL+NT+L +KRGRRYG++G NGCGK+TLMR IANG L+G P   +++S
Sbjct:   68 TSVTVRQGACAFVEAVANKKGRVSC--PYVLPMLGAVLDAYSDKQSVVQEAAKKACEAVLKHVEGVDVQFMLPILFEAMSNSKKWQGKEKALNILGSFVS----IGPKEVAQHLPEIITHLTENMWSTKTQVQTAAFAAIKEIFKTVENGDIEQFMNDIISCIAKPEEVPETIYKLSSTTFIRPVDQPTLAVMVPLLERGLKERATVVLRQTSIIIGNMCKLVTNPEDAQHFLPKLMPGLNAIIENASNPELREVATKAKNVLIEVGAEGNEFVRDEAAIEKEIESLTGFIKSGLKGAKNGNVEDLCINFVCNLASTFIGLKNFEEAEWVKSIGPFVK-LLTEENEKVT-----KEFLKKSVDLDISRKMENMKVEEDIGGVDLCNCEFSLAYGGMILLNNTKLRMKRGRRYGLLGHNGCGKSTLMRAIANGQLEGFPSKDELRS 500          
BLAST of NO06G00330 vs. NCBI_GenBank
Match: KKY21476.1 (putative elongation factor 3 [Diplodia seriata] >OMP82099.1 Elongation factor 3 [Diplodia seriata])

HSP 1 Score: 206.8 bits (525), Expect = 2.000e-49
Identity = 141/448 (31.47%), Postives = 224/448 (50.00%), Query Frame = 0
Query:  156 SSSTQARIRQGALLAVKSMCAEMGSGSWFEPYAIALLRRVLTSYKGAKAVVV--IAEDTAKAIIAIMSSHGVRPVLQVIFDGM-GAYEWQVKEGSIRLLGVVVATACCAGRENVAKQLPDVILKLIDSLSDTRPTVKQAALQVFPRVCKVITNTDVEKIIPVVIQAYADPTKTEAALEAMSACSFIQVVDAPTLGLMLPILMRGMKERKALTKRTCGLIIGNMCKLVADPRDAAQFYPVLQXXXXXXXXXXXXXXXXXACNRALTNLTAVRGALREL---KNHEEEKRRLLPHLHHAVQRVWSGGGSSKYEEIYDYMCDVAVSLTEAGTTEREAWNDALAPYLSAFLTAEKGKAAALAAGEHFFTFCITGIEAXXXXXXXXXXXXDVVNTEFSLGYGGKILLHNTRLWLKRGRRYGIVGKNGCGKTTLMRNIANGSLDGLPEGLKVQS 598
            S+   A  R+ AL A+K++ +        EPY +ALL   LT+  G K V V   A+  A+AI+   +++ V+ V+  I D +  A +W  K   +  + ++   +    R  +  ++PD++  + +++ DT+  VK+AA     ++C++I+N D+E+ IP +I+  A P      +  + A +F+  V  PTL +M+P+L RG+ ER+   KR   +II NMCKLV DP   A F P L                     +A+  L  V   + +    ++   +   +LP L      +     ++K+E IY+Y+  +A  L +   TE   W    APY +A L  EK K AA    ++     + G               D+ N  FSL YG KILL+ T L LKRG+RYG++G NG GKTTLMR I N  L+G P+  +V++
Sbjct:   73 SNKKDALARERALDAIKAIASHSTVSPAVEPYLVALLPATLTAI-GDKMVPVKNAAQAAAQAIVQATNANAVKAVIPAIIDSLHTAQKWPEKMTDLACIELLAERS----RAQMGYRVPDLLPVVSEAMWDTKAEVKKAAYTTMEKLCELISNKDIERFIPELIKCVAKPENVPETVHLLGATTFVSDVHEPTLAIMVPLLERGLVERETAIKRKSAVIIDNMCKLVEDPNIVASFLPRLYPALKKNYETLADPEAREKTKQAIDTLARVGHIVDDKLPERSRSGDVATILPVLKTV---LGEKANNAKFEPIYEYISAIAGQLIDEKETESAVWAANAAPYFTAILGEEKAKDAA----DNLRKKTLPGFVEAEEVPSDEEEGEDLCNCTFSLAYGAKILLNQTHLRLKRGQRYGLLGPNGSGKTTLMRAINNEQLEGFPKQSEVKT 508          
The following BLAST results are available for this feature:
BLAST of NO06G00330 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_008619646.14.300e-5234.87hypothetical protein SDRG_15257 [Saprolegnia dicli... [more]
CDS03584.11.400e-5032.29hypothetical protein LRAMOSA00986 [Lichtheimia ram... [more]
WP_054157810.13.100e-5033.33hypothetical protein [Rhizobium sp. AAP43] >KPF453... [more]
XP_020128426.13.100e-5031.83elongation factor 3 [Diplodia corticola] >OJD32166... [more]
XP_012200958.14.000e-5033.33hypothetical protein SPRG_20160 [Saprolegnia paras... [more]
KXZ41717.16.900e-5031.19hypothetical protein GPECTOR_307g838 [Gonium pecto... [more]
PSC72325.16.900e-5033.10elongation factor 3 [Micractinium conductrix][more]
OQR85222.11.200e-4933.17elongation factor 3 [Achlya hypogyna][more]
EPZ31034.11.500e-4930.79Elongation factor 3-like protein [Rozella allomyci... [more]
KKY21476.12.000e-4931.47putative elongation factor 3 [Diplodia seriata] >O... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000427NSK000427Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G00330.1NO06G00330.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G00330.1NO06G00330.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G00330 ID=NO06G00330|Name=NO06G00330|organism=Nannochloropsis oceanica|type=gene|length=5087bp
CGTGGCAGGACCCGAGCCCTTTTGATTGTTCTTTTTCCAGTCGTCCATGT
GGTTTATACTGGGCATGACCTTGTCTTGACCACGTATAATTGGCTTGCTT
TGTTTCCTCGCGACAGAAAACGCGTGCGTCATCATCCACCCATCCCAATA
CAGCAGCAGGCGCGCACACACGTTGCCATTCGGCGGCGTGGAATGCAGGA
TGGGTGGGTGGGCCAGCAAGAACTTCAGGGGCACCTACGCGACGCCGAAG
CCTTTGCTTTCCAAGGGACTCATCATCAAAGACCACACACCATTGATAAC
TGTCATGCCTCCCATTGTTTTTGTTACACACATCCGCAGACGGGGGCGGC
GAACGAGTGGTGGTGATGGCCGTGGCCTACGCGTCCATCTCACCTGAAGC
CAGCCTGAATAAAGCCACGAATCTCTCCTTATGACACTCTGCTGCTCTTG
TGTGCTTAGCTTATTCATTCCCTTCTCCCTCCCTCCCGTTTTACGCAGAG
ACCATTGCCATGCCCCCGATTAACCCAACGGCTTCTACTGAATTTATTCC
AAAGCGGGTCGAGGGGAAGGACCACAAGGAAGTGGCAGACGCGATGGGGA
AGATGATGATGGgtaagcaagtaacaggggtggggaggagggagagtggc
ggtacacgggactggaaaggatggagtggaggaggatagcacgccgccgc
tgtagtagtggcagtaggagtagcggcagcgcagacttcagagacgccgc
ccgaaggggaagtaaaatgaagaagtccctttcatatagagggtacccat
atgatatgtttacataaatataagtggctgcagcatggattaggaagaga
gatggaggagtagagaatgccgccgtgaatctgatgatgctggttagagg
aagggagagagggagaagggtaggagagggggaaggagagtatgctttgg
cccactgattggtgttgacgagacatgcctccccaagcttagtcggaccc
cttcctccctccttccctccttccctccttctctccttcctacctcagAC
CCGTCCTTCGAGGACTCCTCCACTTCCTCCCTCTCCTCCCTCTCGGGCCT
CAGCAGTATCCAGCAGCTCCAAGGTTTGTGGACCCGCGTCATGGAGTCAC
CGTTGATGCAAGAGCAAGAACAGGCCGCCCTCGGCCTCGCTCTTCTCCTT
AAGGATCATGGCCCTCAGCTGCTCTACCGGAATGTTGCCTACTCCTCCGC
TCCCTCCCCAGCCCCATCCCCCTTCAATTCCTCCAGCTCTCTCTCCTCCC
TGGCCTCCTCCTCCGCTGCCACCACCACCACCAGCGGCGGGGCCGTTACC
ACAACGGTGACGTTACTGAAGGGGATTCAAACGGCGTTAGAAACGGCTGA
AGGGAAGAGCAGCAGCAGCACCCAAGCACGCATCCGACAGGGGGCCCTGT
TGGCTGTAAAATCCATGTGTGCAGAAATGGgtacgacagccctcccctcc
ctccctccctccctccctccctccctccctccctccctccctcctctccc
tctttccctccctccctcacgctgcggattgcgtattttgaccggtctcc
gtttgcatgaccaccccctctcctctccttcccctccctccctccctccc
tctcagGTTCTGGTTCTTGGTTTGAGCCTTATGCCATCGCCCTCCTCCGC
CGAGTCCTCACTTCCTACAAGGGAGCCAAAGCCGTCGTAGTCATCGCGGA
AGgtacgtcctccctccctccctccctccctccctccctccctccgttgc
ttcctccctcctctctctccctccctccctccctccctccctccctccct
ccctccctcctcactctccctctccccctcacctgatccccgtccctccc
tccctccctcagACACGGCAAAGGCCATCATCGCCATCATGTCCTCCCAC
GGCGTCCGTCCCGTACTGCAGGTCATCTTTGATGGAATGGGCGCCTATGA
GTGGCAGgtgggttggagagcaagggagggagggagggagggaaggaggg
aggacatgcagacagtgattgtttgagtcgtgagcgagtgggtgagggag
ctacctagggagggagtgatgaggagggagggagggggaaagggagggag
gatggggtgtgaatggatccgtccgaccgcccgcttcattccaactgatc
tttcttgccctccctccctccctccctccctccctccctccctcctcatc
actccctgcctagGTGAAGGAAGGGTCTATACGCCTTCTGGGGGTGGTGG
TGGCCACTGCCTGTTGTGCCGGCCGCGAGAACGTCGCCAAGCAGCTCCCT
GACGTTATCCTGAAGCTCATCGACTCCCTCAGTGACACCCGACCCACGGT
GAAGCAGgtacttgttcctccctccctccctccctccctccctccctccc
tccttcctgtctggatctgtctctccctaaagacaagacaggacacgaag
acgaattcatccctccctctctccctccctcagGCCGCCCTCCAGGTGTT
TCCCCGCGTGTGCAAAGTCATCACCAACACGGACGTGGAAAAAATCATCC
CCGTCGTCATCCAGGCTTACGCCGACCCGACCAAGACGGAAGCAGCGCTG
GAAGCCATGAGCGCTTGCTCCTTCATTCAGgtaggccttccctccctccc
tctcctcctttggatccaatgtcaacaacctccctcctccctccctccct
ccctccctccctccctccttgaagGTGGTGGATGCCCCTACCCTGGGGTT
AATGCTCCCTATTCTCATGCGAGGAATGAAGGAACGCAAGGCCCTCACCA
AGCGCACTTGCGGCCTCATCATCGgtacgtcctcccttcttccctccctt
ccctccctccctcccttccctccctcccttccctccctcccttccctagg
attcatttctcataaactcacacgcccgaagaagagatgacagcaactca
ttcctccctccctccctccctccctccctccctctctccctccctccttc
cttcatagGCAACATGTGCAAGCTCGTGGCTGATCCTCGTGACGCCGCAC
AATTTTACCCCGTCCTTCAACCGgtgcgtgccctccctccctccctccaa
cccccctccctccctccctccctccctccctccctccctccctccctccc
tccctccctccctccctccctccctccctccctccctccctccctccctc
cctccctccctcccttcctacctccctccctccctcccatcctccctcct
ctcctccctcttctccacctaccctccctccctccctccctccctctatc
tcactctccctccctccctcttatcacccttcctccctccctctacttca
ccctccctccctccccatcaccctccctccccatcatcccagGTCCTGGA
ACGTGCCTTGGACGAGGCCACCAACGAGGACATGAAGGAGGCGTGCAATC
GGGCCCTTACCAACCTCACGGCCGTGCGTGGCGCCCTCCGCGAACTCAAG
gtacgccctccctccctccctccctcccgccctccctccctctcttcctc
cttccctccctcgtttcttacgtccgtccgtccgtccgtccctccctccc
tccctccctccctccctccctccctccctccctccctcccttcctccctc
cctccctcccaagAACCATGAGGAAGAGAAACGGCGCCTTCTCCCTCACC
TTCACCATGCCGTGCAGCGCGTCTGGAGTGGCGGAGgtaatcacttgttc
atatcttgttgatttattcttgttgcttgtttacgaactcttgatttacc
gattgattacgttgtaattgaatgtttacaaaatgatttactttgtccct
cttgccctcctgccgtgcagcgcgtctggagtgaaggaaggaattaaata
atgtcctttcctccctccctccctcccatccttccttcctccctcccttc
ctccctccctccctcccttattctctccttccttatctcctctctctttc
cctccttttctccttttttctccttgccctctcccaccccctccctcctc
ctcttccatgcatacacagGCAGCAGCAAGTACGAAGAAATCTACGACTA
CATGTGCGATGTGGCCGTGTCCCTCACCGAGGCCGGCACTACGGAGAGGG
AAGCATGGAATGACGCCCTTGCTCCGTACTTGTCGGCCTTTTTAACGGCC
GAGAAGGGCAAGGCTGCAGCACTCGCGgtacgagaaacatccccatcctt
tttctcctccctctctttttggaggcttcccttcccttctttttccgtaa
tatctttccttcttccgtccctctctccctctctctcttcttctgtccgt
tcctccctctttcattcccgtcattttctccgaagggagacatatctcac
gtactctccctccctccctccctccctccctcccttccttcctccctccc
ttcctccctcttttcagGCGGGCGAGCATTTTTTCACCTTTTGCATCACA
GGCATCGAGGCGGAGGGTGAAGAGGAGGAGGAGGAGGATGAGCTTGAGGA
TGTGGTTAATACCGAGTTCTCTCTAGgtacgctcgtggacggctgtacgc
cctccctccctccccttcctccctccctccctgcttctctctctcttcct
gtacgctattctaaccctcacacctttccccccctccctccctcagGGTA
CGGTGGGAAGATCCTCCTCCACAATACGCGCCTGTGGTTGAAACGGGGCA
GACGTTACGGGATCGTTGGGAAAAACGGCTGCGGAAAGACAACGCTCATG
CGGAACATCGCCAACGGGTCGCTCGACGGCCTTCCTGAAGGGCTCAAGGT
ACAGTCTAGCCACCCCTGCCCTCCCTCCCNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTTCTTTTCCCTTTTTTGTT
TCGTTTTTTAATGTGCTGCTGCGATTACTTTTGGTGA
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protein sequence of NO06G00330.1

>NO06G00330.1-protein ID=NO06G00330.1-protein|Name=NO06G00330.1|organism=Nannochloropsis oceanica|type=polypeptide|length=657bp
MPPINPTASTEFIPKRVEGKDHKEVADAMGKMMMDPSFEDSSTSSLSSLS
GLSSIQQLQGLWTRVMESPLMQEQEQAALGLALLLKDHGPQLLYRNVAYS
SAPSPAPSPFNSSSSLSSLASSSAATTTTSGGAVTTTVTLLKGIQTALET
AEGKSSSSTQARIRQGALLAVKSMCAEMGSGSWFEPYAIALLRRVLTSYK
GAKAVVVIAEDTAKAIIAIMSSHGVRPVLQVIFDGMGAYEWQVKEGSIRL
LGVVVATACCAGRENVAKQLPDVILKLIDSLSDTRPTVKQAALQVFPRVC
KVITNTDVEKIIPVVIQAYADPTKTEAALEAMSACSFIQVVDAPTLGLML
PILMRGMKERKALTKRTCGLIIGNMCKLVADPRDAAQFYPVLQPVLERAL
DEATNEDMKEACNRALTNLTAVRGALRELKNHEEEKRRLLPHLHHAVQRV
WSGGGSSKYEEIYDYMCDVAVSLTEAGTTEREAWNDALAPYLSAFLTAEK
GKAAALAAGEHFFTFCITGIEAEGEEEEEEDELEDVVNTEFSLGYGGKIL
LHNTRLWLKRGRRYGIVGKNGCGKTTLMRNIANGSLDGLPEGLKVQSSHP
CPPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLFPFLFRFLMC
CCDYFW*
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Synonyms
Publications