NO06G00330.1, NO06G00330.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO06G00330.1
Unique Name	NO06G00330.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2480
Alignment location	chr6:141675..146761 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr6	genome	chr6:141675..146761 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO06G00330.1 vs.
Match: XP_008864972.1 (hypothetical protein H310_03019 [Aphanomyces invadans]; XP_008881029.1 hypothetical protein H310_14863 [Aphanomyces invadans]; XP_008881031.1 hypothetical protein H310_14865 [Aphanomyces invadans]; ETV90338.1 hypothetical protein H310_14863 [Aphanomyces invadans]; ETV90340.1 hypothetical protein H310_14865 [Aphanomyces invadans]; ETW06897.1 hypothetical protein H310_03019 [Aphanomyces invadans])

HSP 1 Score: 230.3 bits (586), Expect = 1.700e-56
Identity = 143/418 (34.21%), Postives = 227/418 (54.31%), Query Frame = 0

Query:  185 EPYAIALLRRVLTSYKGAKAVVV-IAEDTAKAIIAIMSSHGVRPVLQVIFDGMGAYE-WQVKEGSIRLLGVVVATACCAGRENVAKQLPDVILKLIDSLSDTRPTVKQAALQVFPRVCKVITNTDVEKIIPVVIQAYADPTKTEAALEAMSACSFIQVVDAPTLGLMLPILMRGMKERKALTKRTCGLIIGNMCKLVADPRDAAQFYPVLQPVLERALDEATNEDMKEACNRALTNLTAVRGALRELKNHE--EEKRRLLPHLHHAVQRVWSGGGSSKYEEIYDYMCDVAVSLTEAGTTEREAWNDALAPYLSAFLTAEKGKAAALAAGEHFFTFCITGIEAE-GEEEEEEDELEDVVNTEFSLGYGGKILLHNTRLWLKRGRRYGIVGKNGCGKTTLMRNIANGSLDGLPEGLKVQS 598
            EPY    L  +L +Y   K  V   A++ AKA++   + + +  VL +IF G+   + WQ KEG++ L    +   C      V++ LPD+I K  + + DTRP VK+AA +V  + C   +N D+E  IP ++   A+PT+    +  +++ +F++ V+AP L +M P+L+RG+ E K   KR   +II NMCKLV DP +A  F P + P L+R ++   + + ++   RA + L    G + EL   E   E   +L  L   + ++ +   +   E   +Y+      LT A +   E W++++ PYL AF+   +         + F   C    + +  ++  +EDE ED+ + EFSL YGG ILL+N RL LK+G RYG+ G NG GK+TLMR IANG L+G P   +V++
Sbjct:   84 EPYTAGWLVNLLDAYADKKLNVRGPAQEAAKALVQSFNENALSFVLPLIFQGLDRVKKWQTKEGALNL----IIDFCALHPVQVSRNLPDIIPKATEQIWDTRPEVKKAANEVMIKACSTASNADIEPFIPALVSCMANPTEVSECVHKLASTTFVKTVEAPALAIMEPLLVRGLNENKTSVKRQTAVIIDNMCKLVEDPAEALLFTPKVLPTLKRIIESVADPECRDVVKRAHSTLLMAAGNV-ELSEDEGKVEFSAVLAALKTIIDKIPAAKNAHIDEATLNYVAGNGFYLTLARSFIPEKWSNSVKPYLLAFVDEHEIPHIT----KDFREKCFKDNKLKIADDVIQEDEGEDLCDCEFSLAYGGMILLNNARLQLKKGHRYGLCGPNGAGKSTLMRAIANGQLEGFPSKDEVRT 492

The following BLAST results are available for this feature:

BLAST of NO06G00330.1 vs.

BLAST of NO06G00330.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
XP_008864972.1	1.700e-56	34.21	hypothetical protein H310_03019 [Aphanomyces invad...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO06G00330	NO06G00330	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO06G00330.1	NO06G00330.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO06G00330.1.cds1	NO06G00330.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO06G00330.1.cds2	NO06G00330.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO06G00330.1.cds3	NO06G00330.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO06G00330.1.cds4	NO06G00330.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO06G00330.1.cds5	NO06G00330.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO06G00330.1.cds6	NO06G00330.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO06G00330.1.cds7	NO06G00330.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO06G00330.1.cds8	NO06G00330.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO06G00330.1.cds9	NO06G00330.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO06G00330.1.cds10	NO06G00330.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO06G00330.1.cds11	NO06G00330.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO06G00330.1.cds12	NO06G00330.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO06G00330.1.cds13	NO06G00330.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr6:141675..146761+
coding sequence from alignment at chr6:141675..146761+

mRNA sequence

>NO06G00330.1 ID=NO06G00330.1|Name=NO06G00330.1|organism=Nannochloropsis oceanica|type=mRNA|length=2480bp
CGTGGCAGGACCCGAGCCCTTTTGATTGTTCTTTTTCCAGTCGTCCATGT
GGTTTATACTGGGCATGACCTTGTCTTGACCACGTATAATTGGCTTGCTT
TGTTTCCTCGCGACAGAAAACGCGTGCGTCATCATCCACCCATCCCAATA
CAGCAGCAGGCGCGCACACACGTTGCCATTCGGCGGCGTGGAATGCAGGA
TGGGTGGGTGGGCCAGCAAGAACTTCAGGGGCACCTACGCGACGCCGAAG
CCTTTGCTTTCCAAGGGACTCATCATCAAAGACCACACACCATTGATAAC
TGTCATGCCTCCCATTGTTTTTGTTACACACATCCGCAGACGGGGGCGGC
GAACGAGTGGTGGTGATGGCCGTGGCCTACGCGTCCATCTCACCTGAAGC
CAGCCTGAATAAAGCCACGAATCTCTCCTTATGACACTCTGCTGCTCTTG
TGTGCTTAGCTTATTCATTCCCTTCTCCCTCCCTCCCGTTTTACGCAGAG
ACCATTGCCATGCCCCCGATTAACCCAACGGCTTCTACTGAATTTATTCC
AAAGCGGGTCGAGGGGAAGGACCACAAGGAAGTGGCAGACGCGATGGGGA
AGATGATGATGGACCCGTCCTTCGAGGACTCCTCCACTTCCTCCCTCTCC
TCCCTCTCGGGCCTCAGCAGTATCCAGCAGCTCCAAGGTTTGTGGACCCG
CGTCATGGAGTCACCGTTGATGCAAGAGCAAGAACAGGCCGCCCTCGGCC
TCGCTCTTCTCCTTAAGGATCATGGCCCTCAGCTGCTCTACCGGAATGTT
GCCTACTCCTCCGCTCCCTCCCCAGCCCCATCCCCCTTCAATTCCTCCAG
CTCTCTCTCCTCCCTGGCCTCCTCCTCCGCTGCCACCACCACCACCAGCG
GCGGGGCCGTTACCACAACGGTGACGTTACTGAAGGGGATTCAAACGGCG
TTAGAAACGGCTGAAGGGAAGAGCAGCAGCAGCACCCAAGCACGCATCCG
ACAGGGGGCCCTGTTGGCTGTAAAATCCATGTGTGCAGAAATGGGTTCTG
GTTCTTGGTTTGAGCCTTATGCCATCGCCCTCCTCCGCCGAGTCCTCACT
TCCTACAAGGGAGCCAAAGCCGTCGTAGTCATCGCGGAAGACACGGCAAA
GGCCATCATCGCCATCATGTCCTCCCACGGCGTCCGTCCCGTACTGCAGG
TCATCTTTGATGGAATGGGCGCCTATGAGTGGCAGGTGAAGGAAGGGTCT
ATACGCCTTCTGGGGGTGGTGGTGGCCACTGCCTGTTGTGCCGGCCGCGA
GAACGTCGCCAAGCAGCTCCCTGACGTTATCCTGAAGCTCATCGACTCCC
TCAGTGACACCCGACCCACGGTGAAGCAGGCCGCCCTCCAGGTGTTTCCC
CGCGTGTGCAAAGTCATCACCAACACGGACGTGGAAAAAATCATCCCCGT
CGTCATCCAGGCTTACGCCGACCCGACCAAGACGGAAGCAGCGCTGGAAG
CCATGAGCGCTTGCTCCTTCATTCAGGTGGTGGATGCCCCTACCCTGGGG
TTAATGCTCCCTATTCTCATGCGAGGAATGAAGGAACGCAAGGCCCTCAC
CAAGCGCACTTGCGGCCTCATCATCGGCAACATGTGCAAGCTCGTGGCTG
ATCCTCGTGACGCCGCACAATTTTACCCCGTCCTTCAACCGGTCCTGGAA
CGTGCCTTGGACGAGGCCACCAACGAGGACATGAAGGAGGCGTGCAATCG
GGCCCTTACCAACCTCACGGCCGTGCGTGGCGCCCTCCGCGAACTCAAGA
ACCATGAGGAAGAGAAACGGCGCCTTCTCCCTCACCTTCACCATGCCGTG
CAGCGCGTCTGGAGTGGCGGAGGCAGCAGCAAGTACGAAGAAATCTACGA
CTACATGTGCGATGTGGCCGTGTCCCTCACCGAGGCCGGCACTACGGAGA
GGGAAGCATGGAATGACGCCCTTGCTCCGTACTTGTCGGCCTTTTTAACG
GCCGAGAAGGGCAAGGCTGCAGCACTCGCGGCGGGCGAGCATTTTTTCAC
CTTTTGCATCACAGGCATCGAGGCGGAGGGTGAAGAGGAGGAGGAGGAGG
ATGAGCTTGAGGATGTGGTTAATACCGAGTTCTCTCTAGGGTACGGTGGG
AAGATCCTCCTCCACAATACGCGCCTGTGGTTGAAACGGGGCAGACGTTA
CGGGATCGTTGGGAAAAACGGCTGCGGAAAGACAACGCTCATGCGGAACA
TCGCCAACGGGTCGCTCGACGGCCTTCCTGAAGGGCTCAAGGTACAGTCT
AGCCACCCCTGCCCTCCCTCCcNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNCCTTCTTTTCCCTTTTTTGTTTCGTTTT
TTAATGTGCTGCTGCGATTACTTTTGGTGA

protein sequence of NO06G00330.1

>NO06G00330.1-protein ID=NO06G00330.1-protein|Name=NO06G00330.1|organism=Nannochloropsis oceanica|type=polypeptide|length=657bp
MPPINPTASTEFIPKRVEGKDHKEVADAMGKMMMDPSFEDSSTSSLSSLS
GLSSIQQLQGLWTRVMESPLMQEQEQAALGLALLLKDHGPQLLYRNVAYS
SAPSPAPSPFNSSSSLSSLASSSAATTTTSGGAVTTTVTLLKGIQTALET
AEGKSSSSTQARIRQGALLAVKSMCAEMGSGSWFEPYAIALLRRVLTSYK
GAKAVVVIAEDTAKAIIAIMSSHGVRPVLQVIFDGMGAYEWQVKEGSIRL
LGVVVATACCAGRENVAKQLPDVILKLIDSLSDTRPTVKQAALQVFPRVC
KVITNTDVEKIIPVVIQAYADPTKTEAALEAMSACSFIQVVDAPTLGLML
PILMRGMKERKALTKRTCGLIIGNMCKLVADPRDAAQFYPVLQPVLERAL
DEATNEDMKEACNRALTNLTAVRGALRELKNHEEEKRRLLPHLHHAVQRV
WSGGGSSKYEEIYDYMCDVAVSLTEAGTTEREAWNDALAPYLSAFLTAEK
GKAAALAAGEHFFTFCITGIEAEGEEEEEEDELEDVVNTEFSLGYGGKIL
LHNTRLWLKRGRRYGIVGKNGCGKTTLMRNIANGSLDGLPEGLKVQSSHP
CPPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLFPFLFRFLMC
CCDYFW*

mRNA from alignment at chr6:141675..146761+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO06G00330.1 ID=NO06G00330.1|Name=NO06G00330.1|organism=Nannochloropsis oceanica|type=mRNA|length=5087bp|location=Sequence derived from alignment at chr6:141675..146761+ (Nannochloropsis oceanica)
CGTGGCAGGACCCGAGCCCTTTTGATTGTTCTTTTTCCAGTCGTCCATGT
GGTTTATACTGGGCATGACCTTGTCTTGACCACGTATAATTGGCTTGCTT
TGTTTCCTCGCGACAGAAAACGCGTGCGTCATCATCCACCCATCCCAATA
CAGCAGCAGGCGCGCACACACGTTGCCATTCGGCGGCGTGGAATGCAGGA
TGGGTGGGTGGGCCAGCAAGAACTTCAGGGGCACCTACGCGACGCCGAAG
CCTTTGCTTTCCAAGGGACTCATCATCAAAGACCACACACCATTGATAAC
TGTCATGCCTCCCATTGTTTTTGTTACACACATCCGCAGACGGGGGCGGC
GAACGAGTGGTGGTGATGGCCGTGGCCTACGCGTCCATCTCACCTGAAGC
CAGCCTGAATAAAGCCACGAATCTCTCCTTATGACACTCTGCTGCTCTTG
TGTGCTTAGCTTATTCATTCCCTTCTCCCTCCCTCCCGTTTTACGCAGAG
ACCATTGCCATGCCCCCGATTAACCCAACGGCTTCTACTGAATTTATTCC
AAAGCGGGTCGAGGGGAAGGACCACAAGGAAGTGGCAGACGCGATGGGGA
AGATGATGATGGGTAAGCAAGTAACAGGGGTGGGGAGGAGGGAGAGTGGC
GGTACACGGGACTGGAAAGGATGGAGTGGAGGAGGATAGCACGCCGCCGC
TGTAGTAGTGGCAGTAGGAGTAGCGGCAGCGCAGACTTCAGAGACGCCGC
CCGAAGGGGAAGTAAAATGAAGAAGTCCCTTTCATATAGAGGGTACCCAT
ATGATATGTTTACATAAATATAAGTGGCTGCAGCATGGATTAGGAAGAGA
GATGGAGGAGTAGAGAATGCCGCCGTGAATCTGATGATGCTGGTTAGAGG
AAGGGAGAGAGGGAGAAGGGTAGGAGAGGGGGAAGGAGAGTATGCTTTGG
CCCACTGATTGGTGTTGACGAGACATGCCTCCCCAAGCTTAGTCGGACCC
CTTCCTCCCTCCTTCCCTCCTTCCCTCCTTCTCTCCTTCCTACCTCAGAC
CCGTCCTTCGAGGACTCCTCCACTTCCTCCCTCTCCTCCCTCTCGGGCCT
CAGCAGTATCCAGCAGCTCCAAGGTTTGTGGACCCGCGTCATGGAGTCAC
CGTTGATGCAAGAGCAAGAACAGGCCGCCCTCGGCCTCGCTCTTCTCCTT
AAGGATCATGGCCCTCAGCTGCTCTACCGGAATGTTGCCTACTCCTCCGC
TCCCTCCCCAGCCCCATCCCCCTTCAATTCCTCCAGCTCTCTCTCCTCCC
TGGCCTCCTCCTCCGCTGCCACCACCACCACCAGCGGCGGGGCCGTTACC
ACAACGGTGACGTTACTGAAGGGGATTCAAACGGCGTTAGAAACGGCTGA
AGGGAAGAGCAGCAGCAGCACCCAAGCACGCATCCGACAGGGGGCCCTGT
TGGCTGTAAAATCCATGTGTGCAGAAATGGGTACGACAGCCCTCCCCTCC
CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTCTCCC
TCTTTCCCTCCCTCCCTCACGCTGCGGATTGCGTATTTTGACCGGTCTCC
GTTTGCATGACCACCCCCTCTCCTCTCCTTCCCCTCCCTCCCTCCCTCCC
TCTCAGGTTCTGGTTCTTGGTTTGAGCCTTATGCCATCGCCCTCCTCCGC
CGAGTCCTCACTTCCTACAAGGGAGCCAAAGCCGTCGTAGTCATCGCGGA
AGGTACGTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCGTTGC
TTCCTCCCTCCTCTCTCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT
CCCTCCCTCCTCACTCTCCCTCTCCCCCTCACCTGATCCCCGTCCCTCCC
TCCCTCCCTCAGACACGGCAAAGGCCATCATCGCCATCATGTCCTCCCAC
GGCGTCCGTCCCGTACTGCAGGTCATCTTTGATGGAATGGGCGCCTATGA
GTGGCAGGTGGGTTGGAGAGCAAGGGAGGGAGGGAGGGAGGGAAGGAGGG
AGGACATGCAGACAGTGATTGTTTGAGTCGTGAGCGAGTGGGTGAGGGAG
CTACCTAGGGAGGGAGTGATGAGGAGGGAGGGAGGGGGAAAGGGAGGGAG
GATGGGGTGTGAATGGATCCGTCCGACCGCCCGCTTCATTCCAACTGATC
TTTCTTGCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTCATC
ACTCCCTGCCTAGGTGAAGGAAGGGTCTATACGCCTTCTGGGGGTGGTGG
TGGCCACTGCCTGTTGTGCCGGCCGCGAGAACGTCGCCAAGCAGCTCCCT
GACGTTATCCTGAAGCTCATCGACTCCCTCAGTGACACCCGACCCACGGT
GAAGCAGGTACTTGTTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC
TCCTTCCTGTCTGGATCTGTCTCTCCCTAAAGACAAGACAGGACACGAAG
ACGAATTCATCCCTCCCTCTCTCCCTCCCTCAGGCCGCCCTCCAGGTGTT
TCCCCGCGTGTGCAAAGTCATCACCAACACGGACGTGGAAAAAATCATCC
CCGTCGTCATCCAGGCTTACGCCGACCCGACCAAGACGGAAGCAGCGCTG
GAAGCCATGAGCGCTTGCTCCTTCATTCAGGTAGGCCTTCCCTCCCTCCC
TCTCCTCCTTTGGATCCAATGTCAACAACCTCCCTCCTCCCTCCCTCCCT
CCCTCCCTCCCTCCCTCCTTGAAGGTGGTGGATGCCCCTACCCTGGGGTT
AATGCTCCCTATTCTCATGCGAGGAATGAAGGAACGCAAGGCCCTCACCA
AGCGCACTTGCGGCCTCATCATCGGTACGTCCTCCCTTCTTCCCTCCCTT
CCCTCCCTCCCTCCCTTCCCTCCCTCCCTTCCCTCCCTCCCTTCCCTAGG
ATTCATTTCTCATAAACTCACACGCCCGAAGAAGAGATGACAGCAACTCA
TTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCTCTCCCTCCCTCCTTC
CTTCATAGGCAACATGTGCAAGCTCGTGGCTGATCCTCGTGACGCCGCAC
AATTTTACCCCGTCCTTCAACCGGTGCGTGCCCTCCCTCCCTCCCTCCAA
CCCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC
TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC
CCTCCCTCCCTCCCTTCCTACCTCCCTCCCTCCCTCCCATCCTCCCTCCT
CTCCTCCCTCTTCTCCACCTACCCTCCCTCCCTCCCTCCCTCCCTCTATC
TCACTCTCCCTCCCTCCCTCTTATCACCCTTCCTCCCTCCCTCTACTTCA
CCCTCCCTCCCTCCCCATCACCCTCCCTCCCCATCATCCCAGGTCCTGGA
ACGTGCCTTGGACGAGGCCACCAACGAGGACATGAAGGAGGCGTGCAATC
GGGCCCTTACCAACCTCACGGCCGTGCGTGGCGCCCTCCGCGAACTCAAG
GTACGCCCTCCCTCCCTCCCTCCCTCCCGCCCTCCCTCCCTCTCTTCCTC
CTTCCCTCCCTCGTTTCTTACGTCCGTCCGTCCGTCCGTCCCTCCCTCCC
TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCTCCCTC
CCTCCCTCCCAAGAACCATGAGGAAGAGAAACGGCGCCTTCTCCCTCACC
TTCACCATGCCGTGCAGCGCGTCTGGAGTGGCGGAGGTAATCACTTGTTC
ATATCTTGTTGATTTATTCTTGTTGCTTGTTTACGAACTCTTGATTTACC
GATTGATTACGTTGTAATTGAATGTTTACAAAATGATTTACTTTGTCCCT
CTTGCCCTCCTGCCGTGCAGCGCGTCTGGAGTGAAGGAAGGAATTAAATA
ATGTCCTTTCCTCCCTCCCTCCCTCCCATCCTTCCTTCCTCCCTCCCTTC
CTCCCTCCCTCCCTCCCTTATTCTCTCCTTCCTTATCTCCTCTCTCTTTC
CCTCCTTTTCTCCTTTTTTCTCCTTGCCCTCTCCCACCCCCTCCCTCCTC
CTCTTCCATGCATACACAGGCAGCAGCAAGTACGAAGAAATCTACGACTA
CATGTGCGATGTGGCCGTGTCCCTCACCGAGGCCGGCACTACGGAGAGGG
AAGCATGGAATGACGCCCTTGCTCCGTACTTGTCGGCCTTTTTAACGGCC
GAGAAGGGCAAGGCTGCAGCACTCGCGGTACGAGAAACATCCCCATCCTT
TTTCTCCTCCCTCTCTTTTTGGAGGCTTCCCTTCCCTTCTTTTTCCGTAA
TATCTTTCCTTCTTCCGTCCCTCTCTCCCTCTCTCTCTTCTTCTGTCCGT
TCCTCCCTCTTTCATTCCCGTCATTTTCTCCGAAGGGAGACATATCTCAC
GTACTCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCTTCCTCCCTCCC
TTCCTCCCTCTTTTCAGGCGGGCGAGCATTTTTTCACCTTTTGCATCACA
GGCATCGAGGCGGAGGGTGAAGAGGAGGAGGAGGAGGATGAGCTTGAGGA
TGTGGTTAATACCGAGTTCTCTCTAGGTACGCTCGTGGACGGCTGTACGC
CCTCCCTCCCTCCCCTTCCTCCCTCCCTCCCTGCTTCTCTCTCTCTTCCT
GTACGCTATTCTAACCCTCACACCTTTCCCCCCCTCCCTCCCTCAGGGTA
CGGTGGGAAGATCCTCCTCCACAATACGCGCCTGTGGTTGAAACGGGGCA
GACGTTACGGGATCGTTGGGAAAAACGGCTGCGGAAAGACAACGCTCATG
CGGAACATCGCCAACGGGTCGCTCGACGGCCTTCCTGAAGGGCTCAAGGT
ACAGTCTAGCCACCCCTGCCCTCCCTCCcNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTTCTTTTCCCTTTTTTGTT
TCGTTTTTTAATGTGCTGCTGCGATTACTTTTGGTGA

Coding sequence (CDS) from alignment at chr6:141675..146761+

>NO06G00330.1 ID=NO06G00330.1|Name=NO06G00330.1|organism=Nannochloropsis oceanica|type=CDS|length=1971bp|location=Sequence derived from alignment at chr6:141675..146761+ (Nannochloropsis oceanica)
ATGCCCCCGATTAACCCAACGGCTTCTACTGAATTTATTCCAAAGCGGGT
CGAGGGGAAGGACCACAAGGAAGTGGCAGACGCGATGGGGAAGATGATGA
TGGACCCGTCCTTCGAGGACTCCTCCACTTCCTCCCTCTCCTCCCTCTCG
GGCCTCAGCAGTATCCAGCAGCTCCAAGGTTTGTGGACCCGCGTCATGGA
GTCACCGTTGATGCAAGAGCAAGAACAGGCCGCCCTCGGCCTCGCTCTTC
TCCTTAAGGATCATGGCCCTCAGCTGCTCTACCGGAATGTTGCCTACTCC
TCCGCTCCCTCCCCAGCCCCATCCCCCTTCAATTCCTCCAGCTCTCTCTC
CTCCCTGGCCTCCTCCTCCGCTGCCACCACCACCACCAGCGGCGGGGCCG
TTACCACAACGGTGACGTTACTGAAGGGGATTCAAACGGCGTTAGAAACG
GCTGAAGGGAAGAGCAGCAGCAGCACCCAAGCACGCATCCGACAGGGGGC
CCTGTTGGCTGTAAAATCCATGTGTGCAGAAATGGGTTCTGGTTCTTGGT
TTGAGCCTTATGCCATCGCCCTCCTCCGCCGAGTCCTCACTTCCTACAAG
GGAGCCAAAGCCGTCGTAGTCATCGCGGAAGACACGGCAAAGGCCATCAT
CGCCATCATGTCCTCCCACGGCGTCCGTCCCGTACTGCAGGTCATCTTTG
ATGGAATGGGCGCCTATGAGTGGCAGGTGAAGGAAGGGTCTATACGCCTT
CTGGGGGTGGTGGTGGCCACTGCCTGTTGTGCCGGCCGCGAGAACGTCGC
CAAGCAGCTCCCTGACGTTATCCTGAAGCTCATCGACTCCCTCAGTGACA
CCCGACCCACGGTGAAGCAGGCCGCCCTCCAGGTGTTTCCCCGCGTGTGC
AAAGTCATCACCAACACGGACGTGGAAAAAATCATCCCCGTCGTCATCCA
GGCTTACGCCGACCCGACCAAGACGGAAGCAGCGCTGGAAGCCATGAGCG
CTTGCTCCTTCATTCAGGTGGTGGATGCCCCTACCCTGGGGTTAATGCTC
CCTATTCTCATGCGAGGAATGAAGGAACGCAAGGCCCTCACCAAGCGCAC
TTGCGGCCTCATCATCGGCAACATGTGCAAGCTCGTGGCTGATCCTCGTG
ACGCCGCACAATTTTACCCCGTCCTTCAACCGGTCCTGGAACGTGCCTTG
GACGAGGCCACCAACGAGGACATGAAGGAGGCGTGCAATCGGGCCCTTAC
CAACCTCACGGCCGTGCGTGGCGCCCTCCGCGAACTCAAGAACCATGAGG
AAGAGAAACGGCGCCTTCTCCCTCACCTTCACCATGCCGTGCAGCGCGTC
TGGAGTGGCGGAGGCAGCAGCAAGTACGAAGAAATCTACGACTACATGTG
CGATGTGGCCGTGTCCCTCACCGAGGCCGGCACTACGGAGAGGGAAGCAT
GGAATGACGCCCTTGCTCCGTACTTGTCGGCCTTTTTAACGGCCGAGAAG
GGCAAGGCTGCAGCACTCGCGGCGGGCGAGCATTTTTTCACCTTTTGCAT
CACAGGCATCGAGGCGGAGGGTGAAGAGGAGGAGGAGGAGGATGAGCTTG
AGGATGTGGTTAATACCGAGTTCTCTCTAGGGTACGGTGGGAAGATCCTC
CTCCACAATACGCGCCTGTGGTTGAAACGGGGCAGACGTTACGGGATCGT
TGGGAAAAACGGCTGCGGAAAGACAACGCTCATGCGGAACATCGCCAACG
GGTCGCTCGACGGCCTTCCTGAAGGGCTCAAGGTACAGTCTAGCCACCCC
TGCCCTCCCTCCcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNCCTTCTTTTCCCTTTTTTGTTTCGTTTTTTAATGTGC
TGCTGCGATTACTTTTGGTGA

Synonyms

Publications