NO06G00250, NO06G00250 (gene) Nannochloropsis oceanica

Overview
NameNO06G00250
Unique NameNO06G00250
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1899
Alignment locationchr6:108445..110343 +

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Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:108445..110343 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO06G00250 vs. NCBI_GenBank
Match: EWM30045.1 (hypothetical protein Naga_101600g1 [Nannochloropsis gaditana])

HSP 1 Score: 121.7 bits (304), Expect = 3.100e-24
Identity = 77/193 (39.90%), Postives = 114/193 (59.07%), Query Frame = 0
Query:   30 MRRALSLVALGVTLALTAAETAPTLILTSIKAVDTTRANKDQWSVKGYLNDPDGNAILAFGDTGLTALLANGNEDTVSETDFDADDCRLLNNDKGVICKVTGARLSLKRTKRVPKDAMLEVQRNRNTTTASSYYRVSGVFRRQEFENTLSSPLIAAFGIE---GADEISDINYKCTE--KVGTRATKFLCTPG 218
            MRR LSL+ALGVTL +TA +      L ++K  + ++  +DQWS+KG L++P  N + A G  GLT  L + + D ++ T F A +C+LL N +GV CK  GAR+S+KRT+R PK A +   ++ N+ +   YY  SG+FRR +F   L  P++    ++   G+  +  I   C+E  K   R TK  CTPG
Sbjct:    1 MRRILSLLALGVTLVMTAGQ---EFTLKNVKVAERSKTARDQWSMKGNLDNPAMNVVPAIGQLGLTVNLLDVSLDPLASTAFAATNCKLLRNGRGVRCKKMGARVSIKRTRR-PKGAKV---KSSNSNSTGGYYGASGMFRRLQF---LQDPVVTPLTVQVVVGSTTLPAIVSTCSERTKGAGRITKITCTPG 183          
BLAST of NO06G00250 vs. NCBI_GenBank
Match: EWM22002.1 (hypothetical protein Naga_100353g5 [Nannochloropsis gaditana])

HSP 1 Score: 119.8 bits (299), Expect = 1.200e-23
Identity = 80/196 (40.82%), Postives = 109/196 (55.61%), Query Frame = 0
Query:   23 SLSSRYNMRRALSLVALGVTLALTAAETAPTLILTSIKAVDTTRANKDQWSVKGYLNDPDGNAILAFGDTGLTALLANGNEDTVSETDFDADDCRLLNNDKGVICKVTGARLSLKRTKRVPKDAMLEVQRNRNTTTASSYYRVSGVFRRQEF-ENTLSSPLIAAFGIEGADEISDINYKCTEKVGTRATKFLCTPG 218
            +L+ R  MRR LSL+ALG+TLALT   T   L L SIK  + T+ NKD+WS+K +L DP    +   G +GLT  L +  +DT+    F A DC +  N KG  CK+ GAR+S+ R  + PK     V ++ N+T    YY VSG FRR +  E+ +  PL A   + G   +S     C+ K GT+  K  C PG
Sbjct:   73 NLTKRTIMRRGLSLLALGLTLALT---TGQMLSLKSIKTFERTQMNKDKWSMKAHLEDPTLAVVSGIGTSGLTVTLLDTADDTLDTATFAAGDCMVRKNSKGARCKMMGARVSI-RASKPPKG----VGKSHNST--GGYYSVSGSFRRVQLQEDPVDFPLTAELTVPGVGTLSQTLTGCSVK-GTKTRKVTCVPG 257          
BLAST of NO06G00250 vs. NCBI_GenBank
Match: EWM22004.1 (hypothetical protein Naga_100353g6 [Nannochloropsis gaditana])

HSP 1 Score: 119.8 bits (299), Expect = 1.200e-23
Identity = 80/196 (40.82%), Postives = 109/196 (55.61%), Query Frame = 0
Query:   23 SLSSRYNMRRALSLVALGVTLALTAAETAPTLILTSIKAVDTTRANKDQWSVKGYLNDPDGNAILAFGDTGLTALLANGNEDTVSETDFDADDCRLLNNDKGVICKVTGARLSLKRTKRVPKDAMLEVQRNRNTTTASSYYRVSGVFRRQEF-ENTLSSPLIAAFGIEGADEISDINYKCTEKVGTRATKFLCTPG 218
            +L+ R  MRR LSL+ALG+TLALT   T   L L SIK  + T+ NKD+WS+K +L DP    +   G +GLT  L +  +DT+    F A DC +  N KG  CK+ GAR+S+ R  + PK     V ++ N+T    YY VSG FRR +  E+ +  PL A   + G   +S     C+ K GT+  K  C PG
Sbjct:    4 NLTKRTIMRRGLSLLALGLTLALT---TGQMLSLKSIKTFERTQMNKDKWSMKAHLEDPTLAVVSGIGTSGLTVTLLDTADDTLDTATFAAGDCMVRKNSKGARCKMMGARVSI-RASKPPKG----VGKSHNST--GGYYSVSGSFRRVQLQEDPVDFPLTAELTVPGVGTLSQTLTGCSVK-GTKTRKVTCVPG 188          
BLAST of NO06G00250 vs. NCBI_GenBank
Match: EWM30036.1 (hypothetical protein Naga_100179g1 [Nannochloropsis gaditana])

HSP 1 Score: 117.9 bits (294), Expect = 4.500e-23
Identity = 77/208 (37.02%), Postives = 113/208 (54.33%), Query Frame = 0
Query:   14 LHLTQFQEISLSSRYNMRRALSLVALGVTLALTAAETAPTLILTSIKAVDTTRANKDQWSVKGYLNDPDGNAILAFGDTGLTALLANGNEDTVSETDFDADDCRLLNNDKGVICKVTGARLSLKRTKRVPKDAMLEVQRNRNTTTASSYYRVSGVFRRQEF-ENTLSSPLIAAFGIEGAD-EISDINYKCTEKV--GTRATKFLCTPG 218
            L   Q   +S+ S   MRRA  L+ALG+TL +TA +   T  L ++K +D ++  +DQWS+KG L+DP    +   G  GLT  L +    T+  T F A DC+L  N +GV CK  GAR+S+K ++R PK A ++   N N  +   YY  SG+FRR +F ++ +  PL     +       S +   C+EK+    R T+  CTPG
Sbjct:    4 LKRAQLVNVSIFSITTMRRAFFLLALGITLVMTAGQDLFT--LKNVKVIDKSKTARDQWSMKGNLDDPTMTVVPLIGQEGLTVELQDMALATLESTAFAASDCKLRRNGRGVSCKTRGARVSIKMSRR-PKGAYVQ---NSNYNSTGGYYSASGMFRRLQFLQDPIVFPLTVVLNVPSIPFPPSAMVSSCSEKIKGAGRTTRITCTPG 205          
BLAST of NO06G00250 vs. NCBI_GenBank
Match: EWM22005.1 (hypothetical protein Naga_100353g3 [Nannochloropsis gaditana])

HSP 1 Score: 116.3 bits (290), Expect = 1.300e-22
Identity = 75/189 (39.68%), Postives = 102/189 (53.97%), Query Frame = 0
Query:   30 MRRALSLVALGVTLALTAAETAPTLILTSIKAVDTTRANKDQWSVKGYLNDPDGNAILAFGDTGLTALLANGNEDTVSETDFDADDCRLLNNDKGVICKVTGARLSLKRTKRVPKDAMLEVQRNRNTTTASSYYRVSGVFRRQEF-ENTLSSPLIAAFGIEGADEISDINYKCTEKVGTRATKFLCTPG 218
            MRR LSL+ALG+TLALT   T   L L SIK  + TR NKD+WS+KG L DP    +   G +GLT  L +  +DT+    F A DC +  N KG  CK+ GAR+S+ R  + PK   +     +   +   YY VSG FR  +  E+ + SPL A   ++G   +S     C+ + G   T+  C PG
Sbjct:   68 MRRGLSLLALGLTLALT---TGQMLSLKSIKTFERTRMNKDKWSMKGNLEDPTLAVVSGIGTSGLTVTLLDTADDTLDTASFAAGDCMVRKNSKGAKCKMMGARVSI-RASKPPKGVKV-----KTYNSTGGYYSVSGSFRGVQLQEDPVISPLTAELTVQGVGTLSQTLTDCSVR-GAGTTRTTCVPG 246          
BLAST of NO06G00250 vs. NCBI_GenBank
Match: XP_005852576.1 (hypothetical protein NGA_0721300 [Nannochloropsis gaditana CCMP526] >EKU23255.1 hypothetical protein NGA_0721300 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 115.2 bits (287), Expect = 2.900e-22
Identity = 77/189 (40.74%), Postives = 104/189 (55.03%), Query Frame = 0
Query:   30 MRRALSLVALGVTLALTAAETAPTLILTSIKAVDTTRANKDQWSVKGYLNDPDGNAILAFGDTGLTALLANGNEDTVSETDFDADDCRLLNNDKGVICKVTGARLSLKRTKRVPKDAMLEVQRNRNTTTASSYYRVSGVFRRQEF-ENTLSSPLIAAFGIEGADEISDINYKCTEKVGTRATKFLCTPG 218
            MRR LSL+ALG+TLALT   T   L L SIK  + T+ NKD+WS+KG+L DP    +   G  GLT  L +   DT+    F A DC +  + KG  CK+ GAR+S+ R  + PK     V ++ N+T    Y+ VSG FRR +  E+ +  PL A   + G   +S     C+ K GT+  K  C PG
Sbjct:    1 MRRGLSLLALGLTLALT---TGQMLSLKSIKTFERTQMNKDKWSMKGHLEDPTLAVVSGIGTNGLTVTLLDMAADTLDTASFAAGDCMVRKSSKGARCKMMGARVSI-RASKPPKG----VGKSHNST--GGYFSVSGSFRRVQLQEDPVDFPLTAELTVPGVGTLSQTLTGCSVK-GTKTRKVTCVPG 178          
BLAST of NO06G00250 vs. NCBI_GenBank
Match: XP_005855033.1 (hypothetical protein NGA_0415500 [Nannochloropsis gaditana CCMP526] >EKU21331.1 hypothetical protein NGA_0415500 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 114.8 bits (286), Expect = 3.800e-22
Identity = 73/192 (38.02%), Postives = 107/192 (55.73%), Query Frame = 0
Query:   30 MRRALSLVALGVTLALTAAETAPTLILTSIKAVDTTRANKDQWSVKGYLNDPDGNAILAFGDTGLTALLANGNEDTVSETDFDADDCRLLNNDKGVICKVTGARLSLKRTKRVPKDAMLEVQRNRNTTTASSYYRVSGVFRRQEF-ENTLSSPLIAAFGIEGAD-EISDINYKCTEKV--GTRATKFLCTPG 218
            MRRA  L+ALG+TL +TA +   T  L ++K +D ++  +DQWS+KG L+DP    +   G  GLT  L +    T+  T F A DC+L  N +GV CK  GAR+S+K ++R PK A ++   N N  +   YY  SG+FRR +F ++ +  PL     +       S +   C+EK+    R T+  CTPG
Sbjct:    1 MRRAFFLLALGITLVMTAGQDLFT--LKNVKVIDKSKTARDQWSMKGNLDDPTMTVVPLIGQEGLTVELQDMALATLESTAFAASDCKLRRNGRGVSCKTRGARVSIKMSRR-PKGANVQ---NSNYNSTGGYYSASGMFRRLQFLQDPIVFPLTVVLNVPSIPFPPSAMVSSCSEKIKGAGRTTRITCTPG 186          
BLAST of NO06G00250 vs. NCBI_GenBank
Match: EWM20521.1 (hypothetical protein Naga_100335g8, partial [Nannochloropsis gaditana])

HSP 1 Score: 113.6 bits (283), Expect = 8.400e-22
Identity = 76/192 (39.58%), Postives = 106/192 (55.21%), Query Frame = 0
Query:   30 MRRALSLVALGVTLALTAAETA-PTLILTSIKAVDTTRANKDQWSVKGYLNDPDGNAILAFGDTGLTALLANGNEDTVSETDFDADDCRLLNNDKGVICKVTGARLSLKRTKRVPKDAMLEVQRNRNTTTASSYYRVSGVFRRQEF-ENTLSSPLIAAFGIEGADEISDINYKCTE--KVGTRATKFLCTPG 218
            MR  LSL+ALG+TL  T   TA   L L SI+AVD +  NKD W +KG +NDP    + A G TGLT  L +   D ++   F A DCR+  + +   CK+ GAR+S+KR++R PK    +    ++  +   YY V+G FR   F EN + SPL AA  + G+  +SD    C +  +   R+T   C PG
Sbjct:    1 MRSPLSLLALGITLGSTLVTTAGQDLNLKSIRAVDRSVTNKDTWKMKGNINDPSLTFVPAIGQTGLTVELQDAATDPLNTVAFAASDCRVPAHGRRAACKIRGARVSIKRSRR-PKIKTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPVVSPLTAALRVNGS-VLSDTLISCYDLARKSARSTISQCEPG 190          
BLAST of NO06G00250 vs. NCBI_GenBank
Match: EWM20105.1 (hypothetical protein Naga_101776g1 [Nannochloropsis gaditana])

HSP 1 Score: 112.8 bits (281), Expect = 1.400e-21
Identity = 71/185 (38.38%), Postives = 110/185 (59.46%), Query Frame = 0
Query:   23 SLSSRYNMRRALSLVALGVTLALTAAETAPTLILTSIKAVDTTRANKDQWSVKGYLNDPDGNAILAFGDTGLTALLANGNEDTVSETDFDADDCRLLNNDKGVICKVTGARLSLKRTKRVPKDAMLEVQRNRNTTTASSYYRVSGVFRRQEFENTLSSPLIAAFGIE---GADEISDINYKCTEK 205
            S+ S   MRR LSL+ALGVTL +TA +      L ++K  + ++  +DQWS+KG L++P  N + A G  GLT  L + + D ++ T F A +C+LL N +GV CK  GAR+S+KRT+R PK A +   ++ N+ +   YY  SG+FRR +F   L  P++    ++   G+  +  I   C+E+
Sbjct:   30 SILSIATMRRILSLLALGVTLVMTAGQ---EFTLKNVKVAERSKTARDQWSMKGNLDNPAMNVVPAIGQLGLTVNLLDVSLDPLASTAFAATNCKLLRNGRGVSCKKMGARVSIKRTRR-PKGAKV---KSSNSNSTGGYYGASGMFRRLQF---LQDPVVTPVTVQVKVGSTTLPAIVSTCSER 204          
BLAST of NO06G00250 vs. NCBI_GenBank
Match: EWM20135.1 (hypothetical protein Naga_101626g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 107.1 bits (266), Expect = 7.900e-20
Identity = 71/190 (37.37%), Postives = 107/190 (56.32%), Query Frame = 0
Query:   30 MRRALSLVALGVTLALTAAETAPTLILTSIKAVDTTRANKDQWSVKGYLNDPDGNAILAFGDTGLTALLANGNEDTVSETDFDADDCRLLNNDKGVICKVTGARLSLKRTKRVPKDAMLEVQRNRNTTTASSYYRVSGVFRRQEF-ENTLSSPLIAAFGIEGADEISDINYKCTE--KVGTRATKFLCTP 217
            MR  LSL+ALG+TL +TA +      L +IK     +  +DQWS+KG L++P  N +   G +GLT  L + +   ++   F A +C+LL N +GV CK  GAR+ +KRT+R PK A +   ++ +  +   YY  SG+FRR +F ++T+ +PL     + G   +  I   C+E  K   R TK  CTP
Sbjct:    1 MRCILSLLALGITLVMTAGQ---EFTLKNIKVAGRFKTARDQWSMKGNLDNPTMNVVPVIGQSGLTVNLLDASLSPLASAAFAATNCKLLRNARGVSCKSMGARVYIKRTRR-PKAAKV---KSSSYNSTGGYYAASGMFRRLQFLQDTVVTPLTVQL-VVGTTTLPAIVSTCSERTKSAGRITKITCTP 182          
The following BLAST results are available for this feature:
BLAST of NO06G00250 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 17
Match NameE-valueIdentityDescription
EWM30045.13.100e-2439.90hypothetical protein Naga_101600g1 [Nannochloropsi... [more]
EWM22002.11.200e-2340.82hypothetical protein Naga_100353g5 [Nannochloropsi... [more]
EWM22004.11.200e-2340.82hypothetical protein Naga_100353g6 [Nannochloropsi... [more]
EWM30036.14.500e-2337.02hypothetical protein Naga_100179g1 [Nannochloropsi... [more]
EWM22005.11.300e-2239.68hypothetical protein Naga_100353g3 [Nannochloropsi... [more]
XP_005852576.12.900e-2240.74hypothetical protein NGA_0721300 [Nannochloropsis ... [more]
XP_005855033.13.800e-2238.02hypothetical protein NGA_0415500 [Nannochloropsis ... [more]
EWM20521.18.400e-2239.58hypothetical protein Naga_100335g8, partial [Nanno... [more]
EWM20105.11.400e-2138.38hypothetical protein Naga_101776g1 [Nannochloropsi... [more]
EWM20135.17.900e-2037.37hypothetical protein Naga_101626g1, partial [Nanno... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G00250.1NO06G00250.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G00250.1NO06G00250.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G00250 ID=NO06G00250|Name=NO06G00250|organism=Nannochloropsis oceanica|type=gene|length=1899bp
CGAAAAACCAAATAAACACACGAGTTACCCTCTCCTCTTTCTCCGTTGCA
TTTGCAAAAAATTGATCCCTTACTCTTCGTCTAGTGTGCTTTTATTCCCC
CCTAGTTTATTGTGTTTGTCAAAGTTTGTTGTCGGTCTCTTCGGGGCAAT
GGCTTTTAACGCCTTGCAGGACGCGACCAACCTTTTCGTGTAACGTGTAA
TTCCTGCGGTGGAGCGGCCTTGGTTATCCATTTCTAGACGCATATTCGGT
GCGGGGCGACCCCTAGTCTCACCCTTCCTCTTCTAGTATGACCTATGCCT
GACATGGTCGAGGAACTGCGGTCGACGCCGAGAGTGTGGTTGTTTGTGCC
AAGATGACAGATCTGTGAGTTACAACGGGTGTGCAGCGGTGCGAGGCGAC
GTTAAGGGCCCATGTGGCGGCCGCGCGCACCCGTCCCAGAAAAGCCACTC
TTTTATCGATAATGATGATCTACCCCGCCCTCTTTTCTATGATAAGCTGG
GGACTGCTTTGCTCTTGTACCGCTGGCAGTTGTCCTCGATGTGTCTGCGC
TGGTGTCGCCCCCTTCGTGCGGTTGGGTAACTACGCATGATATTGAGCGG
CTCTGGTTGAAACGACACCCGAGACTCACTCACCAAGGCTCAAAGGGCAA
TAATAGCGGGCAAGCTATTGGACAGTGCCTCTTAGGCATGCGTGAAGTCG
CCCTCCTCTCCTGACCCACCTTCTCCCCGTCGTCACTCCTTCCTCTCTTC
ACGCCAGTCATGATGAATTTGCTGCGCCTCCCCCTCACCCCTGCTTGCAC
GCATACTCTTAGGTATCACAAGCTACCTTAGAGACAGGAGGATTGCTATT
TCAATCCTTGTCCTTGCGTTCCTGCCTTACCTCTTGTCCCGGAATATGCT
TACGTCGTCAATACTGCACGGTGTCTCAACCGACAGCCATGCTCAGTCAA
AACACTAAGCACTCATCCAACTCTAATCTACACCTCACACAATTTCAGGA
AATAAGCCTTTCTTCGCGATACAATATGCGTCGCGCTCTTTCTCTGGTTG
CCCTTGGCGTCACACTCGCCCTCACGGCGGCTGAGACTGCGCCGACGTTG
ATTCTTACCTCCATCAAGGCAGTTGACACGACCAGGGCAAACAAGGACCA
ATGGAGTGTCAAGGGCTACCTCAACGACCCTGATGGGAATGCTATCCTGG
CCTTTGGTGACACTGGCTTGACCGCGCTGCTTGCAAACGGGAACGAAGAC
ACAGTGAGTGAAACGGACTTTGACGCGGATGATTGCAGACTGCTCAACAA
CGATAAGGGAGTCATTTGCAAGGTAACGGGCGCCCGCCTCTCGCTCAAGA
GGACTAAGAGAGTACCCAAGGACGCCATGCTGGAGGTGCAGAGGAACCGC
AACACGACCACCGCCTCTTCCTACTACAGGGTTTCGGGTGTTTTCCGCCG
TCAGGAGTTCGAAAACACTCTTTCGTCGCCTCTGATTGCTGCCTTCGGCA
TTGAAGGCGCAGATGAGATCTCTGATATCAATTATAAGTGCACTGAGAAA
GTAGGAACCAGGGCCACCAAGTTTCTCTGCACGCCTGGCACTGCCCCGCC
TACTGCTGCCCCTACTGCTACCCCTACTGCTGCCCCTACTGCTGCCCCTT
CTGTCTAGAGGCAGTCGTGTGGTAGATGAGCATCCGCATGGCGTCCTAAT
CTTGCAAGAGATGCTATAAGTCCTGTTGTGTCTTGAATGTTTACGCGTGA
TTTCGTCCCATATACCCTTTTTCAGTGTGGAAGCCTCAGCTTCCAATCCT
GACACGTCGATTTGTCCATGTGCGTGACAATGTGTCTGTCTGTTGTGTCG
TGTGTATGTGTTGTGTATGTGTTGTGTATGTGTTGTGTTTTGTATGTGT
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protein sequence of NO06G00250.1

>NO06G00250.1-protein ID=NO06G00250.1-protein|Name=NO06G00250.1|organism=Nannochloropsis oceanica|type=polypeptide|length=240bp
MLSQNTKHSSNSNLHLTQFQEISLSSRYNMRRALSLVALGVTLALTAAET
APTLILTSIKAVDTTRANKDQWSVKGYLNDPDGNAILAFGDTGLTALLAN
GNEDTVSETDFDADDCRLLNNDKGVICKVTGARLSLKRTKRVPKDAMLEV
QRNRNTTTASSYYRVSGVFRRQEFENTLSSPLIAAFGIEGADEISDINYK
CTEKVGTRATKFLCTPGTAPPTAAPTATPTAAPTAAPSV*
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Synonyms
Publications