NO06G00180, NO06G00180 (gene) Nannochloropsis oceanica

Overview
NameNO06G00180
Unique NameNO06G00180
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1631
Alignment locationchr6:76532..78162 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:76532..78162 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO06G00180 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR016ncniR016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G00180.1NO06G00180.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G00180.1NO06G00180.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G00180 ID=NO06G00180|Name=NO06G00180|organism=Nannochloropsis oceanica|type=gene|length=1631bp
ACAGCGCGAGCACCAGACAAACCATTAGCGTAAACATAAGTAATATTAAT
ATGTCGATGAGCGCATCCAACGCTGGCTCCCACTCCTTTCGTGATCCCCA
TGACCACGACGAATGCAGCAGCGGCAGCGACAGCAGCAGCACCAGCAGTC
GGAGGAGTGGCACGCCCAAAGTGCAAGCAGCTACCTTTTCTGCCCCTTCG
ACCGCAATCTTTCATGATTCCATGAGCTGGGATCGACAAAATGGTGGAGA
TCGGCCTTGTCATCTGTTTTATGCCTACGAGGATGATgtaagggaacgaa
gggaggaaaggaaagagagggaaggaggagactatctgcgaatactaatg
gtgtgagcgaaggagcacggaagaaaattaggcaaaaaggggtgtggctt
cgatgtcttattctcagtatcctcttgtcccacattagAAATCCCTCCCC
GACCTGATCCGTGCCAAGGCCGCCGTGCACGTTGACCTTGCCCTTCCTCC
CTCTTGCCCTCCCCCGTCCACTGCAAGAAGAAGAGAAGCTGATCAGGGGC
TAGAAATGAGGGAGAAAGACCTAGAGAGGGAAGAGGGGCGGGCGTCTTCG
GTATCGTTgtaagtgtcctttgtatgcatagatcaatagccttcctctcc
gtcctcctcccctccctttctcctttttcttctccatcctcccttcctcc
ctttccaatatcctcacgctcactttaccccctccttccttccttccttt
cttcttctccgttgtccttcctcctcagGACCATCAAAGACTGCCGCTCT
CTCCATCCTTCCTCTCTACGCATCTACGGCGCAGAGATCACACCCTCTGG
CTCCTCCCCCTCCGTCACCTCAAGGCAGGAGAAAAAATGCGAGGGAGGGA
AGGAAGGAGGGGTGTTGAGGCTCTATGGCTTCTGCAAGCCGAGgtgggta
gggagggacggaggaaggggaggggggcaggaagaatggagggacgatat
ggttgtatttcatttcagtctggcatttttcattccctctttgctcccct
cctccatccacctccccttctctcctttctacagCACTGAGGCAGAATCC
CCGGATGACATCTTACAAGGAATGGAGCAGAGgtaaggaaggagggaggg
ggggggtgttggggctggtctccgattcgggtggcccatttctctgtttc
ctaccaacattcttccctccctccctccctccttccctccctccctccct
ccctccctccctttgtccctcctactggacaacagAAACCAGCTGCTGCG
AGCGGCACTGGCGGGAGAGGGTCTCAAACGGACCTGAAAGAGAAGAGGGA
GGGAAAGAGAAGAAGGCCGGGGAAAGAAAGACAGGGGGGGGGGGAGAGAG
AGGAAAAGAGAAAATAAGAAAGCAAAAGAATAGACGGGAGGAAAGGAAAG
AGAGGGAGAGGAGACTAAAAGGAGAGAAGAGGCTTTCACCAGGGCCTCAG
AATGCAGAATGGGATCTGAAGATCATGAATCAGGCATGTACGAAGTACCC
TCGGATGACAGTATTGATACCATACTGATGCTGATGTTGACGTTAACATC
AAAGCGAGAGAGATATATTCGAAAGAAGATT
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protein sequence of NO06G00180.1

>NO06G00180.1-protein ID=NO06G00180.1-protein|Name=NO06G00180.1|organism=Nannochloropsis oceanica|type=polypeptide|length=224bp
MSMSASNAGSHSFRDPHDHDECSSGSDSSSTSSRRSGTPKVQAATFSAPS
TAIFHDSMSWDRQNGGDRPCHLFYAYEDDKSLPDLIRAKAAVHVDLALPP
SCPPPSTARRREADQGLEMREKDLEREEGRASSVSLTIKDCRSLHPSSLR
IYGAEITPSGSSPSVTSRQEKKCEGGKEGGVLRLYGFCKPSTEAESPDDI
LQGMEQRNQLLRAALAGEGLKRT*
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Synonyms
Publications