NO06G00060, NO06G00060 (gene) Nannochloropsis oceanica

Overview
NameNO06G00060
Unique NameNO06G00060
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3595
Alignment locationchr6:34488..38082 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:34488..38082 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016872intramolecular lyase activity
GO:0016872intramolecular lyase activity
Vocabulary: INTERPRO
TermDefinition
IPR036298Chalcone_isomerase_sf
IPR016087Chalcone_isomerase
Homology
The following BLAST results are available for this feature:
BLAST of NO06G00060 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G00060.2NO06G00060.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO06G00060.1NO06G00060.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G00060.2NO06G00060.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO06G00060.1NO06G00060.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G00060 ID=NO06G00060|Name=NO06G00060|organism=Nannochloropsis oceanica|type=gene|length=3595bp
CTCACATTTGTTGTCTTTCCTTTCGATTATTGTTCTCATTGTCTCCGTTG
CTGTGACGTCACGATTTTTTATGTTCTTCACAGAACTCTCTACCTTTTGG
TGGCTTCTTCCGGCGCACGTGCGTTGGGGATACTCGTCGTCCCTGATCAA
TCACGTGATCACCATGTAGACACTTTCTTTCTCGTGCTGCTGGCATTTCG
CACTGCTATCGGTGGCCATTGTTCAGCAGGATTATGGTGCTCGCGTAAAA
ATTATCCCCCACCAAGAAAAAGATGCACGACGTCACGATAACAGTCGTCA
GCTAAAAGAAGTGCTCTTCTTCGCCGTGCGCGTTGCCATGGAACATTTGC
CGCGTTTCTGGGCTAGACAGGGTGTATGATGCACAGAGGAGTGTGTTAGC
TTTTCACTTCACCACATTGACCGCACATAGGAAAATCTGCCTGGAGATTA
AATGCAGCACTTTCCAGAGCCACTCCCCGCGCCCACTTCGCCTCAAGCGC
TGATGCATCGCCTGCTCAAGCGCCTTGGGGCATCTTCCACAACAGCTCCT
GCGGACACAGACTCTGCCAAAGACACCTTGGACTCAGgtattgagacgga
aaaagtgtttgggggggatgactcagagaggggcaagaaagaggcaaaac
ggaggcgggcatggcgcataaaagaccgcgctgctctctacccactctaa
ctcgcaccaaaccacagTGGCAACGGTGCACGAACATCGAACCAAGCTCC
ACGTGCCGATCGAAAAGACGCTTTTCCTCTCCAGgtacgtacatgtcctt
tcgtgtggccatccccgtctcttcctccccttatctccacccccagatat
gtttagagctcatcatagaacgatccccttcccttcaccgtttgggtctc
tttccaacaagacgtccttcaatcattttacgcgccaaaaatcttcatcc
ttcaccggtccctttgtgaaacccatctcatcccctactcgtatgggtga
ctgtcaatcttatccgcagtctctccctcttaccctccactccctttcta
ctccctgtcttcgtttccttccatctacagATTCTGGCACCTGTCCCGCA
GCAGTTGTTCTACCCCGATCAGGCGATATGGTAATCCAGAAGGGCGTGGT
TGCAGCGAGATCACGCTAGAAGAAGACGAAGAGCTCCAAAAAGGCGGCAT
CAGCGCCATGTCCCAAGAGGAGGCCGACAAGAAGGAGCTTGGGAATGGGA
TGGATAAGTGGATTGGGGAGAAACAATCTGCACGGCGGATCACTTTACGT
TTATTGGGTTCAGGGCCCCGTCTTTATGCAGTCGCGGGCCTCATCAAAGT
CCCTGTCTATGCGCTCTCCCTTTACGCCGAAGCCTCCGAAGCACAAGCCC
GTCTTCTGTCTACCCTCCCTCCCACCTTCGACTTTTCTTCACTTCCTCCC
CCTTCTTACTATAATGCCCTCCTTTCTTCCTCCTCCTCTACTTCCTCGGC
TCCCTGGCCTCGAGCCCTCTACCTCACTTTCTGCCGCTCCGTCGGCACTA
AGCGCGTCTTGGACGCATTTCAGCCTTACCCTCATCTGGCTGCCATTTTC
CTGCCTTCCATCGAAGCGTCATTCAAAGACGCGTTTGGAGGGGCCGGAAT
CCAGGCCGGGGATTCGGTCGGATTTGTGTGGCTGGAGGGCGAAGGGCTCC
TGACAGTGgtaagtgtttttttttaaaaaagagcgatcctcatacagtgc
acgccgagtcgatcctgattccactctgccctcccttttcaccctcttct
ttttgctgtcgtcacttgccccttttcatactccgtagATCAATGGCCGC
GTCGTCGACCTCATGGAAGATGAACAGCTTATTCCTGATATCTTCTCCGT
CTGGTTGGGCGAAACACCTGTGAGTGTTGAGGCGAAAGCTAGGATGACAA
ATCAAGCTCATTGGTTGAGGGGAGAGACGGCATAAGGAAAGTAGAAAAGG
ATGCTGGTGGAAAGGGAAGATGAAGCGCAAAGAGTCCTCTCGGGGAAGAC
GCACGACAGACTTCGCTGGCTTTGTGAGACAGAATAGGAAATGTGGCAAT
CGCGATTCAAATCGGGGAAAGACATTCGGCGGCGTGAGCGGGGTACGATG
TTTAGCCTTTCCTCTGCAAAGCAGCGTTGAGATAAATATGTAAGCAAAGC
ATTATAATATTTAAATCAAGGGAGATACCTTGTTTCAGTATTCTACACAA
TGTGGAATTAGGAAATTTATGATTTTGTGATTGAGAATCACATAAGAAAT
TGGCGGATGGAATGTCTTTGCGGATTAGAAAGCGGGAATGGGGAAGGAGG
CGAGAAAGAGACGGCAGTATTAGCAAGCAAATGCTCAACGAAGGAGCTGA
TTTCATATAAACAAAGATACCCACACATGATCGCATGAAAGAAAGCAAGA
CAGAATCCGTCCAATCATTCCGTGTCTAGTTTTTATGTATGGGTGCATGG
GGCTTGCTTGACTCTCCATTGCCTTCCTACTGAGACCCAGGCACGTGTGG
GGCGGAGGGACGAGCTATAATTGCTCTATTCTATTCACTCTGCGTCTGAT
CTCTCCTTGTGTCACACTCTGCTTTACCTGTCTATCCGACTACCTCAATA
GATTTTATCTTTTTCATATACTCATGGTTTCTTCGTATTTTGACATGGAC
ATCAACCATCCAGAAAAATCCACTTTCGATCCTGCATTCGCTGCCTTCAT
CACTAATTCCACAGTCCTGCCAGATCACGACCGGCGACAATCTCCAACAA
AGGGCTTTCTATCGGTAGTGCTGGTACCCCTGCGGCGCCTGAGCCGTCAT
CCATGCCCCTCCTGCTGCCGGTGCTCCAAGTTGTGGCTGTTGCTGCTGTT
GTTGCAACTGTCCTTGTTGTTGTTCCTCCGATGCGCCAGGGTAGGTACCA
TACATCTGAGGGTGCTGCAGTTGCTGCTGCTGCCCTCCCTGCGCCCCGCC
CTGCTGCGGGTAGGTAGAAGGGAAGCTTCCATACATCGAGGATGAGGAGG
GTTCAGAGGCTGAGGGAGGCAGTGCCTGCGCATAGGATAAGGGGGCGGAG
GGAGGGCCGGAGGGAGGAAGAGGATATCCGCCATAGGCATACCCGCCCGA
CTGCTGCTGCTGCTGCTGAGGAGGAGGAGGAGGAAGAGGAGGAAGGACAG
GAGAATACGAGGCAGCGGCGCCGAACCCGTAGGAGGAGGTAGAGGAGGAA
GGAGGGGCTTGGGAGTATTGGGATGGGGCTGAGGAGGAAAGTGGAAAGGA
AGGAGGGATGGAGGGAGGAAAATAGTCTCCCGAGCGCTGCAGCTGCTGTC
CTTGCTGCTCAGACGGCGCCTGCGAGTAGGGAGAGGACGCGGAAGACGAG
GAAGAAGGGGGATGGCCGGGGGGAGGGTGGTAGCCTCCTCCTTGCCCTCT
TTGTTGATGCTGTTGCTGCTGCTGCTGCTGCCGAAAGGGCGCTTGACTGT
ATGGTAGAGGAGCAGCCACAGCAGCCGACGACGAGCCGCCAGAGGGAGGA
AGAGATCCAGGCGACTGCTGATGCTGCTGGTGCTGCTGGTGCTGC
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protein sequence of NO06G00060.2

>NO06G00060.2-protein ID=NO06G00060.2-protein|Name=NO06G00060.2|organism=Nannochloropsis oceanica|type=polypeptide|length=283bp
MQHFPEPLPAPTSPQALMHRLLKRLGASSTTAPADTDSAKDTLDSVATVH
EHRTKLHVPIEKTLFLSRFWHLSRSSCSTPIRRYGNPEGRGCSEITLEED
EELQKGGISAMSQEEADKKELGNGMDKWIGEKQSARRITLRLLGSGPRLY
AVAGLIKVPVYALSLYAEASEAQARLLSTLPPTFDFSSLPPPSYYNALLS
SSSSTSSAPWPRALYLTFCRSVGTKRVLDAFQPYPHLAAIFLPSIEASFK
DAFGGAGIQAGDSVGFVWLEGEGLLTVVSVFF*
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protein sequence of NO06G00060.1

>NO06G00060.1-protein ID=NO06G00060.1-protein|Name=NO06G00060.1|organism=Nannochloropsis oceanica|type=polypeptide|length=326bp
MQHFPEPLPAPTSPQALMHRLLKRLGASSTTAPADTDSAKDTLDSVATVH
EHRTKLHVPIEKTLFLSRFWHLSRSSCSTPIRRYGNPEGRGCSEITLEED
EELQKGGISAMSQEEADKKELGNGMDKWIGEKQSARRITLRLLGSGPRLY
AVAGLIKVPVYALSLYAEASEAQARLLSTLPPTFDFSSLPPPSYYNALLS
SSSSTSSAPWPRALYLTFCRSVGTKRVLDAFQPYPHLAAIFLPSIEASFK
DAFGGAGIQAGDSVGFVWLEGEGLLTVINGRVVDLMEDEQLIPDIFSVWL
GETPVSVEAKARMTNQAHWLRGETA*
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Synonyms
Publications