NO05G05290, NO05G05290 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G05290 vs. NCBI_GenBank
Match: EWM27866.1 (hypothetical protein Naga_100094g3 [Nannochloropsis gaditana]) HSP 1 Score: 395.6 bits (1015), Expect = 3.100e-106 Identity = 350/574 (60.98%), Postives = 411/574 (71.60%), Query Frame = 0
Query: 11 PVEFSSPPRRRIKRSHRSWVTGRVVLGIITFSIIGNMTRLELEKYITQLDARQGNIESSTYAAILANLLGCFIMGFMYESRAFLEKKLHGILSFPDVPDAPSLYVAITTWLCGSITTYSSWNTVVATRVVEDSFCYGLFTAMTGAATSYLALLMGMDLATGFKRIQILEEPPKERQNPLSLPPSLPPSPTLGEDGLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTRFGPLAEELAGAGAVLVERHSISSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIELSMKRPGVSPPYTGEDEEIEYSVYGFAKPNQRDAFILSELALFFVGAAALLGVAGVMIRSTETSAVAPVWLSCLFAPLGVAIRYLLAIGMARHQALRPVLLRFPLQTFAANSLGSLLSALLAVLVPLARTSGRLETAHVMKAISMGLCGGLSTYSTFALELHKLPTDCAWVYALTTFGTTQ 585
PV ++ +RI R+HRSWVT RVV GII FS+IGN+ R+ELE+YI QLDARQGNI+SS Y +ILANLLGCFIMG +YE R FLE+ LHGILSFP +PDA SLYVAITTW+CGSITTYS WN+VVA R+V DSF YG+F+AMTGAAT+YLALL GMD+ +GF R+Q++E+ K+ + PPSLP P XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXX FGPL EELA +GA L+E H S XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX I++ + PG +P T +D+++EYS+Y F KPNQRDAFIL E++ + GAA LL +A + I++ E+S + P WLSCLFAPLG A+RY+LA+ MA+H + +L FPLQTF AN LG+ LSA ++P+ + G TAH+MKA+ +G G LSTYSTFALELHKLPT AW YAL TF TTQ
Sbjct: 67 PVTPAAASPQRIPRTHRSWVTVRVVSGIIMFSMIGNIIRIELERYIIQLDARQGNIKSSMYPSILANLLGCFIMGLLYECRGFLERHLHGILSFPSMPDASSLYVAITTWMCGSITTYSGWNSVVAHRMVYDSFTYGIFSAMTGAATAYLALLHGMDVGSGFTRVQLVEDTDKK-----ASPPSLPSPPADSSSLSISVASPRQSPSGLTHLPSGPLPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMTWLTAWLGLRXXXXXXXXXXXXXXXXXXXXXXXXXXXKVLFGPLPEELAASGAALMEPHRYIS-------------------PERKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIQMQAQPPGFNP--TEDDDDVEYSIYSFRKPNQRDAFILGEVSFYTAGAAGLLALAAIKIKTVESSEMEPRWLSCLFAPLGAALRYVLALAMAQHPTIHLILPHFPLQTFTANVLGATLSAFFDTIIPVLKDRGDGRTAHIMKALLVGFDGCLSTYSTFALELHKLPTQHAWKYALATFITTQ 614
BLAST of NO05G05290 vs. NCBI_GenBank
Match: XP_005856150.1 (hypothetical protein NGA_0249010 [Nannochloropsis gaditana CCMP526] >EKU20218.1 hypothetical protein NGA_0249010 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 307.0 bits (785), Expect = 1.400e-79 Identity = 301/494 (60.93%), Postives = 356/494 (72.06%), Query Frame = 0
Query: 11 PVEFSSPPRRRIKRSHRSWVTGRVVLGIITFSIIGNMTRLELEKYITQLDARQGNIESSTYAAILANLLGCFIMGFMYESRAFLEKKLHGILSFPDVPDAPSLYVAITTWLCGSITTYSSWNTVVATRVVEDSFCYGLFTAMTGAATSYLALLMGMDLATGFKRIQILEEPPKERQNPLSLPPSLPPSPTLGEDGLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTRFGPLAEELAGAGAVLVERHSISSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIELSMKRPGVSPPYTGEDEEIEYSVYGFAKPNQRDAFILSELALFFVGAAALLGVAGVMIRSTETSAVAPVWLSCLFAPLGVAIRYLLAIGMARHQALRPVLL 505
PV ++ +RI R+HRSWVT RVV GII FS+IGN+ R+ELE+YI QLDARQGNI+SS Y +ILANLLGCFIMG +YE R FLE+ LHGILSFP +PDA SLYVAITTW+CGSITTYS WN+VVA R+V DSF YG+F+AMTGAAT+YLALL GMD+ +GF R+Q++E+ K+ + PPSLP P XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXX FGPL EELA +GA L+E H S XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX I++ + PG +P T +D+++EYS+Y F KPNQRDAFIL E++ + GAA LL +A + I++ E+S + P WLSCLFAPLG A+RY+LA+ MA+H A+ +++
Sbjct: 67 PVTPAAASPQRIPRTHRSWVTVRVVSGIIMFSMIGNIIRIELERYIIQLDARQGNIKSSMYPSILANLLGCFIMGLLYECRGFLERHLHGILSFPSMPDASSLYVAITTWMCGSITTYSGWNSVVAHRMVYDSFTYGIFSAMTGAATAYLALLHGMDVGSGFTRVQLVEDTDKK-----ASPPSLPSPPADSSSLSISVASPRQSPSGLTHLPSGPLPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMTWLTAWLGLRXXXXXXXXXXXXXXXXXXXXXXXXXXXKVLFGPLPEELAASGAALMEPHRYIS-------------------PERKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIQMQAQPPGFNP--TEDDDDVEYSIYSFRKPNQRDAFILGEVSFYTAGAAGLLALAAIKIKTVESSEMEPRWLSCLFAPLGAALRYVLALAMAQHPAIAQLII 534
BLAST of NO05G05290 vs. NCBI_GenBank
Match: XP_005855500.1 (hypothetical protein NGA_0249020 [Nannochloropsis gaditana CCMP526] >EKU20858.1 hypothetical protein NGA_0249020 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 110.2 bits (274), Expect = 2.600e-20 Identity = 51/103 (49.51%), Postives = 77/103 (74.76%), Query Frame = 0
Query: 402 IELSMKRPGVSPPYTGEDEEIEYSVYGFAKPNQRDAFILSELALFFVGAAALLGVAGVMIRSTETSAVAPVWLSCLFAPLGVAIRYLLAIGMARHQALRPVLL 505
I++ + PG +P T +D+++EYS+Y F KPNQRDAFIL E++ + GAA LL +A + I++ E+S + P WLSCLFAPLG A+RY+LA+ MA+H A+ +++
Sbjct: 51 IQMQAQPPGFNP--TEDDDDVEYSIYSFRKPNQRDAFILGEVSFYTAGAAGLLALAAIKIKTVESSEMEPRWLSCLFAPLGAALRYVLALAMAQHPAIAQLII 151
BLAST of NO05G05290 vs. NCBI_GenBank
Match: PRP82832.1 (hypothetical protein PROFUN_04695 [Planoprotostelium fungivorum]) HSP 1 Score: 70.9 bits (172), Expect = 1.700e-8 Identity = 50/149 (33.56%), Postives = 73/149 (48.99%), Query Frame = 0
Query: 32 GRVVLGIITFSIIGNMTRLELEKYITQLDARQGNI-----------ESSTYAAILANLLGCFIMGFMYESRAFLEKKLHGILSFPDVPDAPSLYVAITTWLCGSITTYSSWNTVVATRVVEDSFCYGLFTAMTGAATSYLALLMGMDLA 170
G++ L + FSIIG +TR+ LE+ I LD N+ +S Y N+LGC +MGF+ + +L+K + PS+YV +TT LCGSITT+SSW+ V + + G AT Y ++G LA
Sbjct: 23 GQIAL-VSLFSIIGVLTRIGLEQ-IFLLDKTVTNVPIQRIVHTEQQKSPVYFDFWPNVLGCLLMGFIIKQDFWLKKSI------------PSVYVGLTTGLCGSITTFSSWSYEATVVVFRQEYTNYFLVLLIGYATCYATFILGTHLA 157 The following BLAST results are available for this feature:
BLAST of NO05G05290 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 4
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G05290 ID=NO05G05290|Name=NO05G05290|organism=Nannochloropsis oceanica|type=gene|length=3770bpback to top protein sequence of NO05G05290.1 >NO05G05290.1-protein ID=NO05G05290.1-protein|Name=NO05G05290.1|organism=Nannochloropsis oceanica|type=polypeptide|length=600bpback to top protein sequence of NO05G05290.2 >NO05G05290.2-protein ID=NO05G05290.2-protein|Name=NO05G05290.2|organism=Nannochloropsis oceanica|type=polypeptide|length=664bpback to top Synonyms
Publications
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