NO05G05230, NO05G05230 (gene) Nannochloropsis oceanica

Overview
NameNO05G05230
Unique NameNO05G05230
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2957
Alignment locationchr5:1381439..1384395 -

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Properties
Property NameValue
DescriptionDHBP synthase RibB-like alpha/beta domain protein, Sua5 family protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:1381439..1384395 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003725double-stranded RNA binding
GO:0003725double-stranded RNA binding
Vocabulary: INTERPRO
TermDefinition
IPR017945DHBP_synth_RibB-like_a/b_dom
IPR006070YrdC-like_dom
IPR005145SUA5
Homology
[Close]
BLAST of NO05G05230 vs. NCBI_GenBank
Match: XP_005856152.1 (sua5 family protein [Nannochloropsis gaditana CCMP526] >EKU20220.1 sua5 family protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 455.3 bits (1170), Expect = 2.200e-124
Identity = 256/439 (58.31%), Postives = 300/439 (68.34%), Query Frame = 0 
Query:   27 PRPKAELTSDLIRCGAFLRVGGLVAFPTETVYGLGANAYMEKSVERIFEVKGRPLTDPLIVHVAQAEEAWAVFACGSXXXXXXXXXXXXXXXXXXXXXQ-------LISTLAASFWPGPLTLVAPAAADLPLAVSAGTGWVGVRVPSHPLARALLRAASVPVVAPSANRFGHVSPTSAAHVEADLGGHTMLILEGGREGEGDGEKAVCEIGIESTVVKVDAKEGRLTVLRAGAITCSQLKACVKGMDVEVLVKDH-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEPQIAPGQCIKHYAPDRPTYLLSPSRALEGWAAAVAKQAVVLDVGGRLGGLEGVAVFYRDLSRKGDPREAAARLFEGLRWAESAERKGVKG------ELVVLVVDLREEGG------TRGAQEDKEFEMALMDRVMRSASGQEAGAFLL 442
            P  +AELTSD+ R G +LR GGLVAFPTETVYGLGANAY+EKSV RIFEVKGRPLTDPLIVHVAQ EEAW+VFACG                      +       L+STLA +FWPGPLTLVAPAAA +P AV+A TGWVGVRVPSH LARALLRAA+VPVVAPSANRFGHVSPTSAAHV+ADLGGH++LIL+   + E    +  CEIGIESTV KVDA+EGR+T+LRAGA+TCSQL++ ++G  VEV+VK H                                  + PQIAPGQC+KHYAPDRPTYLLS  +A E W   +A +AV+LD+GGRL  L+G+A  Y DLS  GD REAAA LF+ LRWAES +  G KG      +L+VL+VDLR EG               EF +AL+DR+MRSASGQ AG FL+
Sbjct:   14 PTIEAELTSDVDRAGDYLRAGGLVAFPTETVYGLGANAYLEKSVRRIFEVKGRPLTDPLIVHVAQIEEAWSVFACGGNTTYHHAASNNSVPHVEVRAAEEGKKEKDLLSTLAHAFWPGPLTLVAPAAAAIPSAVTAETGWVGVRVPSHSLARALLRAAAVPVVAPSANRFGHVSPTSAAHVQADLGGHSLLILK--EKEEHHAGQGACEIGIESTVAKVDAREGRVTILRAGAVTCSQLESALRGKGVEVVVKGHARQQEEQPKAKAHGEAGGDVMPKELRTEDLTNDENMPQIAPGQCLKHYAPDRPTYLLSALQATESWVDLLAGRAVILDMGGRLQRLKGLAAHYMDLSEAGDVREAAAGLFQALRWAESVD--GGKGKLESEEDLLVLIVDLRREGNXXXXXXXXXXXXXXEFAVALIDRIMRSASGQAAGPFLV 448
[Close]
BLAST of NO05G05230 vs. NCBI_GenBank
Match: EWM27868.1 (DHBP synthase RibB-like alpha/beta domain protein [Nannochloropsis gaditana])

HSP 1 Score: 455.3 bits (1170), Expect = 2.200e-124
Identity = 256/439 (58.31%), Postives = 300/439 (68.34%), Query Frame = 0 
Query:   27 PRPKAELTSDLIRCGAFLRVGGLVAFPTETVYGLGANAYMEKSVERIFEVKGRPLTDPLIVHVAQAEEAWAVFACGSXXXXXXXXXXXXXXXXXXXXXQ-------LISTLAASFWPGPLTLVAPAAADLPLAVSAGTGWVGVRVPSHPLARALLRAASVPVVAPSANRFGHVSPTSAAHVEADLGGHTMLILEGGREGEGDGEKAVCEIGIESTVVKVDAKEGRLTVLRAGAITCSQLKACVKGMDVEVLVKDH-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEPQIAPGQCIKHYAPDRPTYLLSPSRALEGWAAAVAKQAVVLDVGGRLGGLEGVAVFYRDLSRKGDPREAAARLFEGLRWAESAERKGVKG------ELVVLVVDLREEGG------TRGAQEDKEFEMALMDRVMRSASGQEAGAFLL 442
            P  +AELTSD+ R G +LR GGLVAFPTETVYGLGANAY+EKSV RIFEVKGRPLTDPLIVHVAQ EEAW+VFACG                      +       L+STLA +FWPGPLTLVAPAAA +P AV+A TGWVGVRVPSH LARALLRAA+VPVVAPSANRFGHVSPTSAAHV+ADLGGH++LIL+   + E    +  CEIGIESTV KVDA+EGR+T+LRAGA+TCSQL++ ++G  VEV+VK H                                  + PQIAPGQC+KHYAPDRPTYLLS  +A E W   +A +AV+LD+GGRL  L+G+A  Y DLS  GD REAAA LF+ LRWAES +  G KG      +L+VL+VDLR EG               EF +AL+DR+MRSASGQ AG FL+
Sbjct:  130 PTIEAELTSDVDRAGDYLRAGGLVAFPTETVYGLGANAYLEKSVRRIFEVKGRPLTDPLIVHVAQIEEAWSVFACGGNTTYHHAASNNSVPHVEVRAAEEGKKEKDLLSTLAHAFWPGPLTLVAPAAAAIPSAVTAETGWVGVRVPSHSLARALLRAAAVPVVAPSANRFGHVSPTSAAHVQADLGGHSLLILK--EKEEHHAGQGACEIGIESTVAKVDAREGRVTILRAGAVTCSQLESALRGKGVEVVVKGHARQQEEQPKAKAHGEAGGDVMPKELRTEDLTNDENMPQIAPGQCLKHYAPDRPTYLLSALQATESWVDLLAGRAVILDMGGRLQRLKGLAAHYMDLSEAGDVREAAAGLFQALRWAESVD--GGKGKLESEEDLLVLIVDLRREGNXXXXXXXXXXXXXXEFAVALIDRIMRSASGQAAGPFLV 564
[Close]
BLAST of NO05G05230 vs. NCBI_GenBank
Match: XP_005787110.1 (hypothetical protein EMIHUDRAFT_425634 [Emiliania huxleyi CCMP1516] >EOD34681.1 hypothetical protein EMIHUDRAFT_425634 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 264.2 bits (674), Expect = 7.100e-67
Identity = 177/416 (42.55%), Postives = 218/416 (52.40%), Query Frame = 0 
Query:   27 PRPKAELTSDLIRCGAFLRVGGLVAFPTETVYGLGANAYMEKSVERIFEVKGRPLTDPLIVHVAQAEEAWAVFACGSXXXXXXXXXXXXXXXXXXXXXQLISTLAASFWPGPLTLVAPAAADLPLAVSAGTGWVGVRVPSHPLARALLRAASVPVVAPSANRFGHVSPTSAAHVEADLGGHTMLILEGGREGEGDGEKAVCEIGIESTVVKVDAKEGRLTVLRAGAITCSQLKACVKGMDVEVLVKDHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEPQIAPGQCIKHYAPDRPTYLLSPSRAL------EGWAAAVAKQAVVLDVGGRLGGLEGVAVFYRDLSRKGDPREAAARLFEGLRWAESAERKGVKGELVVLVVDLREEGGTRGAQEDKEFEMALMDRVMRSASGQEA 437
            PRP   L   L    + LR G LVAFPTETVYGLGA+A+ E SV  IF VKGRP +DPLIVHVA A  A A+   G                      +L+  L ASFWPGPLTLVAPA  +LP AV++G+G+VGVRVP H LAR LL+ A+VPV APSANRFGHVSPT A HV  DL  H +L+L+             C +GIESTVVK+D + G L +LR G +  + L+  +                                          +  ++PG  + HY+PD P YLL   + L       G A     +AV+LD GGRL  L   A  YRDLS + D   AA+ +FE LRWAE+    G +    VLV D+  E   RG  E  E   AL DR+ R+ASG  A
Sbjct:    8 PRP-GRLIDSLDEAASALRSGRLVAFPTETVYGLGADAFNEASVASIFTVKGRPRSDPLIVHVASAGAAEALVRLG------------------PGGLELMRRLTASFWPGPLTLVAPAVPELPSAVTSGSGYVGVRVPEHALARELLQRAAVPVAAPSANRFGHVSPTRAQHVMDDLAHHPILVLDA-------PPADCCGVGIESTVVKIDEQAGELVLLRRGGVPEASLERWLAA-----------------------------EQGGAAQRFTLKRMVSPGMLLTHYSPDLPAYLLRGPQLLAAPPPGAGSAPLSLGEAVLLDFGGRLAHLRPAAAAYRDLSERADAAAAASGVFEALRWAEAQHAAGAR---CVLVADV--EAAARGG-EAAECVPALADRLYRAASGVRA 362
[Close]
BLAST of NO05G05230 vs. NCBI_GenBank
Match: XP_009040740.1 (hypothetical protein AURANDRAFT_12057, partial [Aureococcus anophagefferens] >EGB04634.1 hypothetical protein AURANDRAFT_12057, partial [Aureococcus anophagefferens])

HSP 1 Score: 256.1 bits (653), Expect = 1.900e-64
Identity = 176/403 (43.67%), Postives = 208/403 (51.61%), Query Frame = 0 
Query:   40 CGAFLRVGGLVAFPTETVYGLGANAYMEKSVERIFEVKGRPLTDPLIVHVAQAEEAWAVFACGSXXXXXXXXXXXXXXXXXXXXXQLISTLAASFWPGPLTLVAPAAADLPLAVSAGTGWVGVRVPSHPLARALLRAASVPVVAPSANRFGHVSPTSAAHVEADLGGHTMLILEGGREGEGDGEKAVCEIGIESTVVKVDAKEGR-----LTVLRAGAITCSQL-KACVKGMDVEVLVKDHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEPQIAPGQCIKHYAPDRPTYLLS---PSRALEGWAAAVAKQAVVLDVGGRLGGLEGVAVFYRDLSRKGDPREAAARLFEGLRWAESAERKGVKGELVVLVVDLREEGGTRGAQEDKEFEMALMDRVMRSASG 434
            CG  L  GGL AFPTETVYGLGANA  E +V RIFEVK RPL+DPLIVHVA+ E+A  +   G                      ++  TL  +FWPGPLTLV PA   LP  + AGTG VGVR PSH LARAL+ AA VPV APSAN FGHVSPT A HV  DLG   + +L+G   GE  G+   C  GIESTV  +    GR     LTV R GA+  + L +A     D E+                                    P+ APGQ + HYAP  P  L+S    + A +  + A   Q VV+D GGRL  LE VA+ YRDLS  GD   AAA LFE LRWAE      V     V + DL+ E  + G          + DRV R+ SG
Sbjct:    4 CGRVLASGGLCAFPTETVYGLGANALDEAAVRRIFEVKRRPLSDPLIVHVAEPEDALGLVDLGG---------------ARAAAHKVFVTLTRAFWPGPLTLVCPARNHLPACLGAGTGTVGVRCPSHGLARALIGAAGVPVAAPSANLFGHVSPTRAQHVVDDLGASELHVLDGSAAGEFGGDPP-CAHGIESTVCAIAPAPGRDDAVVLTVYRRGAVAATALERAVADEPDAEL---------------------------RAAVAKLVVPECAPGQLLTHYAPKIPAALVSLVAEAGADDAKSDAYVAQCVVVDFGGRLAALEDVALAYRDLSAAGDAAAAAAALFETLRWAED-----VPKAKNVFIADLQAEKASPG------LIAGVADRVYRATSG 352
[Close]
BLAST of NO05G05230 vs. NCBI_GenBank
Match: XP_012195360.1 (hypothetical protein SPRG_01602 [Saprolegnia parasitica CBS 223.65] >KDO33620.1 hypothetical protein SPRG_01602 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 251.5 bits (641), Expect = 4.800e-63
Identity = 166/406 (40.89%), Postives = 217/406 (53.45%), Query Frame = 0 
Query:   37 LIRCGAFLRVGGLVAFPTETVYGLGANAYMEKSVERIFEVKGRPLTDPLIVHVAQAEEAWAVFACGSXXXXXXXXXXXXXXXXXXXXXQLISTLAASFWPGPLTLVAPAAADLPLAVSAGTGWVGVRVPSHPLARALLRAASVPVVAPSANRFGHVSPTSAAHVEADLGGHTMLILEGGREGEGDGEKAVCEIGIESTVVKVDAKEGRLTVLRAGAITCSQLKACVK---GMDVEV-----LVKDHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEPQIAPGQCIKHYAPDRPTYLLSPSRALEGWAAAVAKQAVVLDVGGRLGGLEGVAVFYRDLSRKGDPREAAARLFEGLRWAESAERKGVKGELVVLVVDLREEGGTRGAQEDKEFEMALMDRVMRSASGQ 435
            L R G  LR G LVAFPTETVYGLGANA+  K++  IFE KGRPLTDPLIVHV   ++A  +                           L  TLA +FWPGPLTL+APA   LP  VSA TG+VG+R+P+HP+A+ALL AA VPV APSANRFGHVSPT+A HV  DLG +      GG     +   + CE+GIESTV K+   E +L V R G ++ + L   +    G+ +E+     +V DH                             ++ Q+APGQ + HYAPD  T++L PS +      A+ K  VVLD  GRL  ++     Y DLS  GD   AA  +F+ LRWAE      V G   +++ D+        +   +E   AL DR+ R++SG+
Sbjct:   10 LARAGQELRAGRLVAFPTETVYGLGANAFDAKALLSIFEAKGRPLTDPLIVHVPSVQKALELVELNE------------------TGVHLFKTLATAFWPGPLTLIAPAIPALPREVSANTGFVGIRIPNHPIAKALLEAAQVPVAAPSANRFGHVSPTTAQHVINDLGAY-----PGGLHVIDNTGASCCEVGIESTVAKLVPDEKKLLVFRRGGVSEAALHHVLNATMGLGIEIVYAQRVVDDH----------------------------STQNQVAPGQLLTHYAPDVETFMLEPSSSTTSVTPAM-KTWVVLDFHGRLAAVQPHVAGYLDLSASGDILAAAHVVFDSLRWAEQ-----VHGATRIVIPDV--------SAVPQEHAPALHDRLFRASSGK 350
[Close]
BLAST of NO05G05230 vs. NCBI_GenBank
Match: GAX16991.1 (hypothetical protein FisN_5Hh370 [Fistulifera solaris])

HSP 1 Score: 250.8 bits (639), Expect = 8.100e-63
Identity = 168/427 (39.34%), Postives = 229/427 (53.63%), Query Frame = 0 
Query:   27 PRP--KAELTSDLIRCGAFLRVGGLVAFPTETVYGLGANAYMEKSVERIFEVKGRPLTDPLIVHVAQAEEAWAVFACGSXXXXXXXXXXXXXXXXXXXXXQLISTLAASFWPGPLTLVAPAAADLPLAVSAGTGWVGVRVPSHPLARALLRAASVPVVAPSANRFGHVSPTSAAHVEADLGGHTMLILEGGREGEGDGEKAVCEIGIESTVVKV-DAKEG--RLTVLRAGAITCSQLKACVKGMDVEVLVKDHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEPQIAPGQCIKHYAPDRPTYLLSPSRALEGWAAAVAKQAVVLDVGGRLGGLEGVAVFYRDLSRKGDPREAAARLFEGLRWAESAERKGVKGELVVLVVDLREEGGTRGAQEDKEFEMALMDRVMRSASG------QEAGAFLLE 443
            PRP  KA++ +D+  CG  LR+G LVAFPTETVYGLG +A   ++V ++F  K RPLTDPLIVHV +  +A++++                          ++S L   FWPGPLTLVA A + +P  + AGTG+   R PSH  ARALL AA VP+ APSAN+FGHVSPT+A HV  DL    + ILE   EG+   E   C++G+ESTV K+ + +EG   LTVLR GA++   LK  + G+ VEV+ K                                   +APGQ I+HY+P+ P++LLSP+       A +   +VV+D GG+L   +   + YRDL+  G    AA  +F+ LRWAE      V G   VL  +L +             E+A+ DR+ R+ASG      +EA A L E
Sbjct:   25 PRPQIKAKILNDISVCGERLRLGELVAFPTETVYGLGCHALDVEAVAKVFAAKERPLTDPLIVHVLEPRDAFSLW---------------------KQENPILSKLCNDFWPGPLTLVAEANSKVPSTIMAGTGYCACRSPSHSTARALLEAAQVPIAAPSANKFGHVSPTTAQHVFDDLQYEDVWILE--TEGQ---EGPCCDVGVESTVAKLEETQEGGYLLTVLRQGAVSVHTLKDSLTGLPVEVVAK------------------------LKRATKDDVANVAPGQTIRHYSPNIPSFLLSPACVKSELRAELLSHSVVIDYGGQLAHWKDHCLAYRDLTPDGSSSAAAQTVFDTLRWAEQ-----VPGASYVLFPELPDSSDA--------LELAVKDRLTRAASGIVINALEEATAVLAE 388
[Close]
BLAST of NO05G05230 vs. NCBI_GenBank
Match: XP_005780722.1 (hypothetical protein EMIHUDRAFT_424133 [Emiliania huxleyi CCMP1516] >EOD28293.1 hypothetical protein EMIHUDRAFT_424133 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 249.2 bits (635), Expect = 2.400e-62
Identity = 176/422 (41.71%), Postives = 215/422 (50.95%), Query Frame = 0 
Query:   27 PRPKAELTSDLIRCGAFLRVGGLVAFPTETVYGLGANAYMEKSVERIFEVKGRPLTDPLIVHVAQAEEAWAVFACGSXXXXXXXXXXXXXXXXXXXXXQLISTLAASFWPGPLTLVAPAAADLPLAVSAGTGWVGVRVPSHPLARALLRAASVPVVAPSANRFGHVSPTSAAHVEADLGGHTMLILEGGREGEGDGEKAVCEIGIESTVVKVDAKEGRLTVLRAG---AITCSQLKACVKGMDVEVLVKDHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEPQIAPGQ---CIKHYAPDRPTYLLSPSRAL------EGWAAAVAKQAVVLDVGGRLGGLEGVAVFYRDLSRKGDPREAAARLFEGLRWAESAERKGVKGELVVLVVDLREEGGTRGAQEDKEFEMALMDRVMRSASGQEA 437
            PRP   L   L    + LR G LVAFPTETVYGLGA+A+ E SV  IF VKGRP +DPLIVHVA A  A A+   G                      +L+  L ASFWPGPLTLVAPA  +LP AV++G+G+VGVRVP H LAR LL+ A+VPV APSANRFGHVSPT A HV  DL  H +L+L+             C +GIESTVVK+D +     +   G   + +C    AC + +                                      + P   P Q    + HY+PD P YLL   + L       G A     +AV+LD GGRL  L   A  YRDLS + D   AA+ +FE LRWAE+    G +    VLV D+  E   RG  E  E   AL DR+ R+ASG  A
Sbjct:    8 PRP-GRLIDSLDEAASALRSGRLVAFPTETVYGLGADAFNEASVASIFTVKGRPRSDPLIVHVASAGAAEALVRLG------------------PGGLELMRRLTASFWPGPLTLVAPAVPELPSAVTSGSGYVGVRVPEHALARELLQRAAVPVAAPSANRFGHVSPTRAQHVMDDLAHHPILVLDA-------PPADCCGVGIESTVVKIDEQAPPHRMPHLGGRVSSSCCAAAACPRLLPA-----------------------------------AARPSPLPSQGRMLLTHYSPDLPAYLLRGPQLLAAPPPGAGSAPLSLGEAVLLDFGGRLAHLRPAAAAYRDLSERADAAAAASGVFEALRWAEAQHAAGAR---CVLVADV--EAAARGG-EAAECVPALADRLYRAASGVRA 362
[Close]
BLAST of NO05G05230 vs. NCBI_GenBank
Match: GAX25287.1 (hypothetical protein FisN_5Lh370 [Fistulifera solaris])

HSP 1 Score: 249.2 bits (635), Expect = 2.400e-62
Identity = 160/407 (39.31%), Postives = 218/407 (53.56%), Query Frame = 0 
Query:   30 KAELTSDLIRCGAFLRVGGLVAFPTETVYGLGANAYMEKSVERIFEVKGRPLTDPLIVHVAQAEEAWAVFACGSXXXXXXXXXXXXXXXXXXXXXQLISTLAASFWPGPLTLVAPAAADLPLAVSAGTGWVGVRVPSHPLARALLRAASVPVVAPSANRFGHVSPTSAAHVEADLGGHTMLILEGGREGEGDGEKAVCEIGIESTVVKV-DAKEGR--LTVLRAGAITCSQLKACVKGMDVEVLVKDHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEPQIAPGQCIKHYAPDRPTYLLSPSRALEGWAAAVAKQAVVLDVGGRLGGLEGVAVFYRDLSRKGDPREAAARLFEGLRWAESAERKGVKGELVVLVVDLREEGGTRGAQEDKEFEMALMDRVMRSASG 434
            KA + +D+  CG  LR+G LVAFPTETVYGLG +A    +V ++F  K RPLTDPLIVHV +  +A++++                          ++S L   FWPGPLTLVA A + +P  + AGTG+   R PSHP ARALL AA VP+ APSAN+FGHVSPT+A HV  DL    + ILE   EG+   E   C++G+ESTV K+ +  +G+  LTVLR GA++   LK  + G+ VEV+ K                                   +APGQ I+HY+P+ P++LLSP+            QAVV+D GG+L   +   + YRDL+  G    AA  +F+ LRWAE     G      V+  +L + G           E+A+ DR+ R+ASG
Sbjct:   30 KARILNDIPACGERLRLGELVAFPTETVYGLGCHALDVNAVAKVFAAKERPLTDPLIVHVLETRDAFSLW---------------------KQDNPILSKLCHDFWPGPLTLVAEANSKVPSTIMAGTGYCACRSPSHPTARALLEAAQVPIAAPSANKFGHVSPTTAHHVFDDLHNEDVWILE--TEGQ---EGPCCDVGVESTVAKLEETNQGKYLLTVLRQGAVSVHALKDSLTGLPVEVVAK------------------------LKRATKDDVANVAPGQTIRHYSPNIPSFLLSPACVKSEPRVEFLSQAVVIDYGGKLIHWKDHCLAYRDLTTDGASSAAAQTVFDTLRWAEQVPSAG-----YVVFPELPDSGDA--------LELAVKDRLTRAASG 373
[Close]
BLAST of NO05G05230 vs. NCBI_GenBank
Match: XP_008615974.1 (hypothetical protein SDRG_11703 [Saprolegnia diclina VS20] >EQC30648.1 hypothetical protein SDRG_11703 [Saprolegnia diclina VS20])

HSP 1 Score: 248.8 bits (634), Expect = 3.100e-62
Identity = 166/406 (40.89%), Postives = 216/406 (53.20%), Query Frame = 0 
Query:   37 LIRCGAFLRVGGLVAFPTETVYGLGANAYMEKSVERIFEVKGRPLTDPLIVHVAQAEEAWAVFACGSXXXXXXXXXXXXXXXXXXXXXQLISTLAASFWPGPLTLVAPAAADLPLAVSAGTGWVGVRVPSHPLARALLRAASVPVVAPSANRFGHVSPTSAAHVEADLGGHTMLILEGGREGEGDGEKAVCEIGIESTVVKVDAKEGRLTVLRAGAITCSQLKACVK---GMDVEV-----LVKDHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEPQIAPGQCIKHYAPDRPTYLLSPSRALEGWAAAVAKQAVVLDVGGRLGGLEGVAVFYRDLSRKGDPREAAARLFEGLRWAESAERKGVKGELVVLVVDLREEGGTRGAQEDKEFEMALMDRVMRSASGQ 435
            L R G  LR G LVAFPTETVYGLGANA+  K++  IFE KGRPLTDPLIVHV   ++A  +                           L  TLA +FWPGPLTL+APA   LP  VSA TG+VG+R+P+HP+A+ALL AA VPV APSANRFGHVSPT+A HV  DLG +      GG     +   + CE+GIESTV K+  +E +L V R G ++ + L   +    G+ +EV     +V DH                             ++ Q+APGQ + HYAPD  T++L PS +         K  VVLD  GRL  L+     Y DLS  G+   AA  +F+ LRWAE      V G   +++ D+        +   +E   AL DR+ R++SG+
Sbjct:   10 LARAGQELRAGRLVAFPTETVYGLGANAFDAKALLSIFEAKGRPLTDPLIVHVPSVQKALELVELNE------------------SGVHLFKTLATAFWPGPLTLIAPAIPALPREVSANTGFVGIRIPNHPIAKALLEAAQVPVAAPSANRFGHVSPTTAQHVINDLGAY-----PGGLHVIDNTGASCCEVGIESTVAKLVPEEKKLLVFRRGGVSEAALHHVLNETFGLGIEVVHAQRVVDDH----------------------------STQNQVAPGQLLTHYAPDVETFMLEPSSSPPS-VTPEMKTWVVLDFHGRLTALQPHVAGYLDLSASGNILAAAHVVFDSLRWAEQ-----VSGATRIVIPDV--------SAVQQEHAPALHDRLFRASSGK 350
[Close]
BLAST of NO05G05230 vs. NCBI_GenBank
Match: OQR92256.1 (hypothetical protein ACHHYP_03913 [Achlya hypogyna])

HSP 1 Score: 245.4 bits (625), Expect = 3.400e-61
Identity = 165/406 (40.64%), Postives = 216/406 (53.20%), Query Frame = 0 
Query:   37 LIRCGAFLRVGGLVAFPTETVYGLGANAYMEKSVERIFEVKGRPLTDPLIVHVAQAEEAWAVFACGSXXXXXXXXXXXXXXXXXXXXXQLISTLAASFWPGPLTLVAPAAADLPLAVSAGTGWVGVRVPSHPLARALLRAASVPVVAPSANRFGHVSPTSAAHVEADLGGHTMLILEGGREGEGDGEKAVCEIGIESTVVKVDAKEGRLTVLRAGAITCSQLKACVK---GMDVEVL-----VKDHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEPQIAPGQCIKHYAPDRPTYLLSPSRALEGWAAAVAKQAVVLDVGGRLGGLEGVAVFYRDLSRKGDPREAAARLFEGLRWAESAERKGVKGELVVLVVDLREEGGTRGAQEDKEFEMALMDRVMRSASGQ 435
            L R GA LR G LV+FPTETVYGLGANA+  K++  IFE KGRPLTDPLIVHV   + A A+                          +L  TLA +FWPGPLTL+APA   LP  VSA TG+VG+R+P+HP+A+ALL  A VPV APSANRFGHVSPT+A HV  DLG +      GG     +   + CE+GIESTV K+   E +L V R G ++ + L   +    G+ +E++     V DH                             ++ Q+APGQ + HYAPD  T++L P         A+ K  VVLD   RL  L+     Y DLS  G   +AA  +F+ LRWAE      V+G   +L+ D+        +   +E   AL DR+ R++SG+
Sbjct:   10 LARAGAELRAGRLVSFPTETVYGLGANAFDAKALLSIFEAKGRPLTDPLIVHVPTVDAALALVELDD------------------KGVRLFKTLAKAFWPGPLTLIAPAIPALPREVSANTGFVGIRIPNHPIAKALLEEAKVPVAAPSANRFGHVSPTTAQHVINDLGAY-----PGGLHVIDNVGASCCEVGIESTVAKLMPAENQLLVFRRGGVSEAALHHTLNETMGLGIEIIYAQRVVADH----------------------------STQNQVAPGQLLTHYAPDVETFMLEPEAVAPAPTPAM-KTWVVLDFNKRLVSLQPHVAGYLDLSPAGVVVDAANIVFDSLRWAEQ-----VEGATRILIPDV--------SSVPQEHAPALHDRLYRASSGK 350
The following BLAST results are available for this feature:
BLAST of NO05G05230 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005856152.12.200e-12458.31sua5 family protein [Nannochloropsis gaditana CCMP... [more]
EWM27868.12.200e-12458.31DHBP synthase RibB-like alpha/beta domain protein ... [more]
XP_005787110.17.100e-6742.55hypothetical protein EMIHUDRAFT_425634 [Emiliania ... [more]
XP_009040740.11.900e-6443.67hypothetical protein AURANDRAFT_12057, partial [Au... [more]
XP_012195360.14.800e-6340.89hypothetical protein SPRG_01602 [Saprolegnia paras... [more]
GAX16991.18.100e-6339.34hypothetical protein FisN_5Hh370 [Fistulifera sola... [more]
XP_005780722.12.400e-6241.71hypothetical protein EMIHUDRAFT_424133 [Emiliania ... [more]
GAX25287.12.400e-6239.31hypothetical protein FisN_5Lh370 [Fistulifera sola... [more]
XP_008615974.13.100e-6240.89hypothetical protein SDRG_11703 [Saprolegnia dicli... [more]
OQR92256.13.400e-6140.64hypothetical protein ACHHYP_03913 [Achlya hypogyna... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR078ncniR078Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G05230.2NO05G05230.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO05G05230.1NO05G05230.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|626418gene_10582Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G05230.2NO05G05230.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO05G05230.1NO05G05230.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G05230 ID=NO05G05230|Name=NO05G05230|organism=Nannochloropsis oceanica|type=gene|length=2957bp
GCACTCCTTCGGCTTGTCTGTGCTTGTGCGAGAAGGGAGGGTGGGAGGAT
GGGATGGGAGGCGACAGAAAAGCGATTAGGTGAGTCAAGCAATGCGTGCG
TGTGCGTTGGTGCTGGATATACATCTCTCTTCCAAACGACCCGATCGGGC
TGACCCTGACCAGCGGAGACAATCGGGATGCCACGATGGGTGAGCGGTTT
TCACACTGGGTGTGAATGGACTACGAAATGCGCCTCTCAACGCTGAAGAC
CTCGATCTTGGGGATTTTGATGCGGCACCGACCGTCGCACCGGACTGGCG
ATAGAATGCCGAATCAGAGTAGCGGGGgtacgtagcctccgtaagtggta
tgattcctaccacactgcacaaacaaacaaaaatacagcaaacagcactc
gacgagagacttaaagctgcttacccatcatactgacacgcacacacgcg
catctatagGCATCGACCGCCGCTGTTGTCACCCTAAGCTATCCGTATCA
AGAAGCACCAAAGCTACAAGGAGCACCAGCCAACCTCGTCACCTCATAAG
TAAGTGCGACTTAATCCACCCATCAACGAAGCCGCCGCCATCTCGCGTTC
CGGTCCTTCTGTCTATGCGCCTAGGTGTCTCGGCGTGCCCTCTTACCTTC
GCCACCATCTGCCTTGTCTTTCATCTACAAGCACgtaagtaccttgatac
ttcctcttcctcccaacctccttctgccccgtaagccttttgatcgcaat
acatgccgctcttttccctctttcatatttcttgcgatttgatcattaac
atatgctccctggctcgctctgcatagTCTGACGTCCTTCATAATTGTCC
CTGCACACAGCCTCTTGCATCGAAGCTGCCGCCGTCACGAGCTGCATCGC
CACCACCACCACGACGACCCGACGTGTCATCTTTAGCAGCGGTAGGAGCA
GCAGGATCGGACTCCCTAATCAAACACGCGCCTTTACACACGCGAGAGCG
CCATTTGCATTCTCCTACTCCCCTGCCTTCCAATTTCAAGTTCACACGCC
GCGCTCTCGCTATATCTTTTCGAGTGCTGCTTTTGCTGCCACCATTGCCG
TGTCCAAAACCCAGCCACCCGCTTCTTCCCCCCCCCTTGTCAAGAGCATC
AGAATGACAGCCAGCTCCTCCTCTTCATCGTCCGCTTCCTCTTCCTCACC
CCCGGCAGCATCAACCACTGCCCCACCATCACCGCGACCCAAAGCCGAGC
TCACTTCCGACCTAATCCGTTGCGGGGCCTTTCTCAGGGTAGGTGGGCTA
GTGGCGTTCCCCACGGAGACAGTGTACGGACTTGGTGCAAATGCCTACAT
GGAGAAGAGCGTGGAAAGGATATTCGAAGTGAAGGGCCGACCACTGACTG
ATCCCTTGATAGTGCACGTCGCACAGGCTGAGGAGGCCTGGGCGGTGTTT
GCCTGCGGTAGTGCCGCGAACAGCAGCAGCAGCAGCAGCAGTGAAGCACA
GGCAGCCCATCATGCCAAAGAAAAACAGCTCATCTCCACCCTTGCTGCCA
GCTTCTGGCCGGGCCCCCTTACGCTGGTAGCCCCGGCTGCTGCTGACCTG
CCCCTAGCAGTCTCGGCCGGCACAGGGTGGGTAGGCGTGCGTGTGCCCTC
CCACCCTCTGGCTCGGGCATTGTTACGCGCAGCATCAGTACCTGTGGTGG
CCCCGTCGGCCAATCGCTTTGGGCATGTCAGTCCCACGAGTGCGGCCCAT
GTGGAGGCGGACCTGGGGGGGCATACCATGTTGATCCTGGAGGGAGGGAG
GGAAGGAGAGGGGGACGGAGAAAAGGCTGTGTGTGAGATCGGGATTGAAT
CGACGGTGGTCAAGGTAGATGCAAAGGAGGGGAGGCTCACTGTCCTGAGG
GCCGGGGCCATCACCTGCTCGCAGCTCAAGGCATGCGTAAAAGGTATGGA
TGTCGAGGTTCTGGTCAAGGACCATAGCAGCAGCAGCAGCAGCAGCGCTA
ATCATCATCATCATCAGCAGCAACAACAACAGCAAGGCAGAAAAATTCTG
GCAGAAGATGACAGCGAGCCCCAGATCGCTCCCGGGCAATGCATTAAACA
TTATGCACCTGACCGTCCCACCTACCTTCTCTCCCCCTCCCGCGCCCTGG
AGGGATGGGCGGCGGCAGTGGCCAAGCAGGCAGTCGTTTTGGATGTTGGA
GGGCGTTTGGGAGGACTGGAGGGAGTAGCGGTATTCTATCGGGACTTGAG
CCGGAAGGGGGACCCTAGAGAGGCTGCTGCAAGGCTTTTTGAAGGGCTCA
GGTGGGCGGAGAGCGCGGAGAGGAAAGGAGTGAAAGGGGAGCTGGTGGTG
CTGGTAGTGGATTTGAGGGAGGAGGGAGGAACGAGGGGAGCGCAGGAAGA
TAAGGAGTTTGAGATGGCGTTGATGGATCGGGTGATGCGATCGGCGTCGG
GGCAGGAGGCGGGGGCGTTCCTGTTGGAGGGATAAGGAGAACCATGAGGA
GGATCGCGGAAGGACGAAGAAAGCGATCAATGTGATTGACATTGGTGCTC
GAAAGAGAGATAAAGACAGCCATACATAAAGAACATCCGAAAGCACCTTA
CCAATTATAAATAAGAACACATATCACACAAACTCTTTTTGTATTCTTGT
CGCTCCTAGTTTTGCATGAGTCTGTGTTGATCCTCATTTTTATATCGAGC
AGGTAGGGGTACTGTACCAGACTCAGATTGGCCACGGGGGCAAGCTCATC
GAATAATAGTATATGCGGGAGTAAGGAAATATGCATGTGTGCATCGGTGA
GTTTCATCCTATGCCTACTCTCCATTCAACGTGCCTGCACCGAGGAGGTA
GGAATGGTGGACACAGGTGTGTCGAGCAAATTGTCGCCAGCAAAAAAACT
TTCTTCCTTGAATACCAGGACACTGGCTGCTGCCCAGAGAAATAGGGAGC
GTTGTCA
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protein sequence of NO05G05230.2

>NO05G05230.2-protein ID=NO05G05230.2-protein|Name=NO05G05230.2|organism=Nannochloropsis oceanica|type=polypeptide|length=654bp
MDYEMRLSTLKTSILGILMRHRPSHRTGDRMPNQSSGGIDRRCCHPKLSV
SRSTKATRSTSQPRHLISKCDLIHPSTKPPPSRVPVLLSMRLGVSACPLT
FATICLVFHLQAPSCIEAAAVTSCIATTTTTTRRVIFSSGRSSRIGLPNQ
TRAFTHARAPFAFSYSPAFQFQVHTPRSRYIFSSAAFAATIAVSKTQPPA
SSPPLVKSIRMTASSSSSSSASSSSPPAASTTAPPSPRPKAELTSDLIRC
GAFLRVGGLVAFPTETVYGLGANAYMEKSVERIFEVKGRPLTDPLIVHVA
QAEEAWAVFACGSAANSSSSSSSEAQAAHHAKEKQLISTLAASFWPGPLT
LVAPAAADLPLAVSAGTGWVGVRVPSHPLARALLRAASVPVVAPSANRFG
HVSPTSAAHVEADLGGHTMLILEGGREGEGDGEKAVCEIGIESTVVKVDA
KEGRLTVLRAGAITCSQLKACVKGMDVEVLVKDHSSSSSSSANHHHHQQQ
QQQQGRKILAEDDSEPQIAPGQCIKHYAPDRPTYLLSPSRALEGWAAAVA
KQAVVLDVGGRLGGLEGVAVFYRDLSRKGDPREAAARLFEGLRWAESAER
KGVKGELVVLVVDLREEGGTRGAQEDKEFEMALMDRVMRSASGQEAGAFL
LEG*
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protein sequence of NO05G05230.1

>NO05G05230.1-protein ID=NO05G05230.1-protein|Name=NO05G05230.1|organism=Nannochloropsis oceanica|type=polypeptide|length=444bp
MTASSSSSSSASSSSPPAASTTAPPSPRPKAELTSDLIRCGAFLRVGGLV
AFPTETVYGLGANAYMEKSVERIFEVKGRPLTDPLIVHVAQAEEAWAVFA
CGSAANSSSSSSSEAQAAHHAKEKQLISTLAASFWPGPLTLVAPAAADLP
LAVSAGTGWVGVRVPSHPLARALLRAASVPVVAPSANRFGHVSPTSAAHV
EADLGGHTMLILEGGREGEGDGEKAVCEIGIESTVVKVDAKEGRLTVLRA
GAITCSQLKACVKGMDVEVLVKDHSSSSSSSANHHHHQQQQQQQGRKILA
EDDSEPQIAPGQCIKHYAPDRPTYLLSPSRALEGWAAAVAKQAVVLDVGG
RLGGLEGVAVFYRDLSRKGDPREAAARLFEGLRWAESAERKGVKGELVVL
VVDLREEGGTRGAQEDKEFEMALMDRVMRSASGQEAGAFLLEG*
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Synonyms
Publications