NO05G04890, NO05G04890 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G04890 vs. NCBI_GenBank
Match: EWM27914.1 (histone deacetylase superfamily protein [Nannochloropsis gaditana]) HSP 1 Score: 607.1 bits (1564), Expect = 4.000e-170 Identity = 294/397 (74.06%), Postives = 328/397 (82.62%), Query Frame = 0 Query: 1 MAANGGE-VHTASALTTKKSTTGYVWHERYMWHHGGKYAWNEWIQPTRHFESPESKRRLHNLLDASGLLEKLVRIPPRLATVEEITRFHTAEYVAKIQRLSAEYGGEAGDFATFGKGSYDIARLAVGGVLEAVDAVIEGRREGGEEGEVITNAYCLVRPPGHHAERDRGMGFCLFNNVALGALHAVAKHGLKRVAIVDYDVHHGNGTQQAFYKDPSVLFISIHQDSNYPAGTGYVEERGQEGGEGFTINIPLPPGSGSEAYYQAFDRVVLPAVRAFAPELLLVSSGYDAGFLDPLATMMLSSEHFRVLGQKMNGVAAEVCGGKIVYAHEGGYSDLYVPFCGHAVIEEMSGVKTEVKDCMLTDINHWGYHELQQHQDAVIKKCEVLVDDLQKRMAATK 397 MAAN G +SALT KSTTGYVWHERYMWHH GKY WNEWIQPTRHFESPESKRRLHNLLDASGLL+ LVR+PPRLA+VEE+TRFHT EYV KIQ LS GGEAGDFATFG GSY+IA LAVGGVL A+DAV+ GR + G++ + NAYCL RPPGHHAE+DRGMGFCLFNNVALGA+HA K GLKRVAIVDYDVHHGNGTQQAFY+D +VLFISIHQDSNYPA TGYVEE G AY++AFDRV+LPAVRAFAPELLLVSSGYDAG+LDPLATMMLSSEHFR LGQK+NG+A +VC G+IVY HEGGYSDLYVPFCGHA++EE++ +T V+DCMLTD++ WGY ELQ HQDAVIKKCE LV L++RMA K Sbjct: 1 MAANAGAGTKLSSALT--KSTTGYVWHERYMWHHAGKYTWNEWIQPTRHFESPESKRRLHNLLDASGLLDCLVRVPPRLASVEELTRFHTLEYVGKIQSLSRAQGGEAGDFATFGPGSYEIACLAVGGVLNAIDAVVTGRTDTGDK---VRNAYCLARPPGHHAEKDRGMGFCLFNNVALGAMHARVKQGLKRVAIVDYDVHHGNGTQQAFYEDEAVLFISIHQDSNYPAHTGYVEENGTXXXXXXXXXXXXXXXXXXXAYFEAFDRVILPAVRAFAPELLLVSSGYDAGYLDPLATMMLSSEHFRTLGQKLNGLAEDVCDGRIVYVHEGGYSDLYVPFCGHAIVEELTKRRTGVRDCMLTDVHQWGYQELQPHQDAVIKKCEALVTALKRRMAGMK 392
BLAST of NO05G04890 vs. NCBI_GenBank
Match: KXZ50612.1 (hypothetical protein GPECTOR_15g295 [Gonium pectorale]) HSP 1 Score: 431.8 bits (1109), Expect = 2.300e-117 Identity = 212/378 (56.08%), Postives = 265/378 (70.11%), Query Frame = 0 Query: 21 TGYVWHERYMWHHGGKYA-WNEWIQPTRHFESPESKRRLHNLLDASGLLEKLVRIPPRLATVEEITRFHTAEYVAKIQRLSAEYG---GEAGDFATFGKGSYDIARLAVGGVLEAVDAVIEGRREGGEEGEVITNAYCLVRPPGHHAERDRGMGFCLFNNVALGALHAVAKHGLKRVAIVDYDVHHGNGTQQAFYKDPSVLFISIHQDSNYPAGTGYVEERGQEGGEGFTINIPLPPGSGSEAYYQAFDRVVLPAVRAFAPELLLVSSGYDAGFLDPLATMMLSSEHFRVLGQKMNGVAAEVCGGKIVYAHEGGYSDLYVPFCGHAVIEEMSGVKTEVKDCMLTDINHWGYHELQQHQDAVIKKCEVLVDDLQKRMAA 395 TGY++HE Y WH+ G + ++ RH+E+PE+KRR HNL+ SGLLE+L + PR AT E+ R H +Y+ +++ +SA+ AGD ATF G YDIA LA GG +EAVDAV+ GR + NAY LVRPPGHHAER GMGFC+FNNVA+ A HA+ HGL RVA+VD+DVHHGNGTQ AF DP VLFIS+HQDSNYP +GYV E G GEG T+N+PLPPGSGS AY AF+RVVLPA+ A+ P+LLLVS+GYDA ++D LA M+LSS F + ++ A +CGG++V HEGGYS+LYVPFC A +EEMSGVKTEVKD L ++ WGY ELQ HQDA + E L+ L+ AA Sbjct: 8 TGYLYHESYFWHNAGHIQNFRAHVEAWRHWENPETKRRFHNLVAVSGLLEQLTHLKPRPATEAELARIHCPDYIRRVREMSADESKGHHTAGDVATFAPGGYDIAALAAGGAIEAVDAVMAGR---------VRNAYALVRPPGHHAERAEGMGFCIFNNVAVAAAHALEVHGLARVAVVDFDVHHGNGTQHAFEADPRVLFISVHQDSNYPLRSGYVTENGVGAGEGTTLNVPLPPGSGSGAYRAAFERVVLPALEAYGPQLLLVSAGYDASYMDMLAAMILSSADFGWMMGRLVEAAGRLCGGRLVALHEGGYSELYVPFCALAALEEMSGVKTEVKDPWLHEVTSWGYQELQPHQDAAVAAAEQLLPKLRTVAAA 376
BLAST of NO05G04890 vs. NCBI_GenBank
Match: XP_002900512.1 (histone deacetylase, putative [Phytophthora infestans T30-4] >EEY59827.1 histone deacetylase, putative [Phytophthora infestans T30-4]) HSP 1 Score: 407.9 bits (1047), Expect = 3.600e-110 Identity = 195/363 (53.72%), Postives = 265/363 (73.00%), Query Frame = 0 Query: 22 GYVWHERYMWHHGGKYAWNEWIQPTRHFESPESKRRLHNLLDASGLLEKLVRIPPRLATVEEITRFHTAEYVAKIQRLSA-EYGGEAGDFATFGKGSYDIARLAVGGVLEAVDAVIEGRREGGEEGEVITNAYCLVRPPGHHAERDRGMGFCLFNNVALGALHAVAKHG--LKRVAIVDYDVHHGNGTQQAFYKDPSVLFISIHQDSNYPAGTGYVEERGQEGGEGFTINIPLPPGSGSEAYYQAFDRVVLPAVRAFAPELLLVSSGYDAGFLDPLATMMLSSEHFRVLGQKMNGVAAEVCGGKIVYAHEGGYSDLYVPFCGHAVIEEMSGVK---TEVKDCMLTDINHWGYHELQQHQDAVI 379 GYV+ ERY+WH ++ +++P RH+ESPE+KRR H+LL SGLL++LV I P++AT+ ++ R HT Y+ ++++LSA E GG AG+ A F + ++DIARL+ GGVL AVDAV+EGR + AY L RPPGHHA DRGMGFCL NNVA+ A H + + +K++AIVDYDVHHGNGTQ+AFY D VLF+S+HQ +NYPA TG + ERG++ G GFT+N+PLPPGSGS AY AF VV+P++ +F P+ +LVSSG+DA + DPLA M+LSS FR + ++ VA +C G+IV+AHEGGYS+ YVPFCG AVIEE+ G++ ++KD L+++ W Y ELQ+HQ V+ Sbjct: 4 GYVYDERYLWHRPWSQQYSAFVEPFRHWESPETKRRFHSLLAVSGLLDQLVTIRPQIATMIQLERVHTRRYLEELEQLSAREEGGNAGEEAPFSQLAFDIARLSAGGVLAAVDAVMEGR---------VDTAYALTRPPGHHAVADRGMGFCLLNNVAITAKHLLETYSSQIKKIAIVDYDVHHGNGTQEAFYDDDRVLFVSLHQANNYPADTGKITERGEDKGLGFTVNVPLPPGSGSGAYEYAFRNVVIPSLESFKPDFVLVSSGFDASYADPLAAMILSSSVFRFMAHEVVDVAKRICAGRIVFAHEGGYSETYVPFCGAAVIEELLGIQDVDKQIKDPFLSEVERWEYQELQEHQKKVV 357
BLAST of NO05G04890 vs. NCBI_GenBank
Match: WP_019528998.1 (class II histone deacetylase [Dasania marina]) HSP 1 Score: 387.5 bits (994), Expect = 5.000e-104 Identity = 195/382 (51.05%), Postives = 254/382 (66.49%), Query Frame = 0 Query: 12 SALTTKKSTTGYVWHERYMWHHGGKYA----WNEWIQPTRHFESPESKRRLHNLLDASGLLEKLVRIPPRLATVEEITRFHTAEYVAKIQRLSAEYGGEAGDFATFGKGSYDIARLAVGGVLEAVDAVIEGRREGGEEGEVITNAYCLVRPPGHHAERDRGMGFCLFNNVALGALHAVAKHGLKRVAIVDYDVHHGNGTQQAFYKDPSVLFISIHQDSNYPAGTGYVEERGQEGGEGFTINIPLPPGSGSEAYYQAFDRVVLPAVRAFAPELLLVSSGYDAGFLDPLATMMLSSEHFRVLGQKMNGVAAEVCGGKIVYAHEGGYSDLYVPFCGHAVIEEMSGVKTEVKDCMLTDINHWGYHELQQHQDAVIKKCEVLVDDLQ 390 ++ T K TG+++HE YMWH+ G YA + +QP H E+PE+KRR NLL+ SGLL KL I R AT EI R HT E++ I+ LSA +GG+ G F+ G+G+YDIA L+ GGV+ AVDAV+ G + NAY LVRPPGHHA D MGFC+F N L LHA+ LKR+A VD+DVHHGNGTQ F++DP L ISIHQD +PA +G+ E G GEG+ +NIPLPPGSG AY AFDRVV+PA++A+ PEL++V SG+DAG DP+ M + SE +R L +K+ VA EVC G++V HEGGY+ VPF G AV+EE+SG+KT+V D L + G +LQ HQD I+ E L+ +L+ Sbjct: 2 TSATNKSLKTGFMYHEIYMWHNTGNYAGIMPYGNPVQPGEHVENPETKRRFRNLLEVSGLLAKLESIQARPATEAEILRHHTREHLDNIKALSAAHGGDGGIFSPVGRGTYDIALLSAGGVISAVDAVLNGE---------VDNAYALVRPPGHHALADMAMGFCMFANAVLAGLHALEVRALKRIATVDWDVHHGNGTQAGFWEDPRALTISIHQDRCFPADSGFTTEIGTGAGEGYNMNIPLPPGSGVGAYEAAFDRVVIPALQAYKPELIIVPSGFDAGAHDPMGRMQMHSEGYRNLTRKIMKVADEVCDGRVVMCHEGGYNPATVPFYGLAVLEELSGIKTDVTDPFLEIMAALGGQDLQPHQDEAIRAAEALLANLK 374
BLAST of NO05G04890 vs. NCBI_GenBank
Match: WP_073264608.1 (class II histone deacetylase [Cryptosporangium aurantiacum] >SHN47070.1 Acetoin utilization deacetylase AcuC [Cryptosporangium aurantiacum]) HSP 1 Score: 385.6 bits (989), Expect = 1.900e-103 Identity = 199/361 (55.12%), Postives = 241/361 (66.76%), Query Frame = 0 Query: 21 TGYVWHERYMWHH----GGKYAWNEWIQPTRHFESPESKRRLHNLLDASGLLEKLVRIPPRLATVEEITRFHTAEYVAKIQRLSAEYGGEAGDFATFGKGSYDIARLAVGGVLEAVDAVIEGRREGGEEGEVITNAYCLVRPPGHHAERDRGMGFCLFNNVALGALHAVAKHGLKRVAIVDYDVHHGNGTQQAFYKDPSVLFISIHQDSNYPAGTGYVEERGQEGGEGFTINIPLPPGSGSEAYYQAFDRVVLPAVRAFAPELLLVSSGYDAGFLDPLATMMLSSEHFRVLGQKMNGVAAEVCGGKIVYAHEGGYSDLYVPFCGHAVIEEMSGVKTEVKDCMLTDINHWGYHELQQHQDAV 378 TG+VWHERYMWH GG + W++P H ESP++KRR NL+ ASGLLE L + PR ATV E+TR H EYVA + R +A GG G FG+ SY+IA LA GGVL AV+AV G V+ NAY LVRPPGHHA D G GFCLFNNVA+ A HA A GL+R+AIVD+DVHHGNGTQ F+ DPSVL +SIHQD YP +G V + G G EG TIN+PLPPGSG AY AF VV PA+ FAP+L+LV+ G+DA DPLA MLSSE FR L +++ AA C G++V AHEGGYS VPFCG AV+E++SGV+T V+D L + ++G DAV Sbjct: 3 TGWVWHERYMWHDTGTAGGPLPVSRWVEPMEHVESPDAKRRFANLVSASGLLEHLTPLAPRPATVAELTRVHLPEYVADVDRQAAAGGGNLGGGTPFGEFSYEIALLAAGGVLAAVEAV---------AGGVVDNAYALVRPPGHHATPDHGRGFCLFNNVAVAARHAQATLGLERIAIVDWDVHHGNGTQDTFWDDPSVLAVSIHQDGVYPPQSGPVTDVGGPGAEGTTINVPLPPGSGDGAYRAAFTEVVEPALDRFAPDLILVACGFDANGFDPLARQMLSSESFRELTRRVADAAARHCDGRLVLAHEGGYSPFAVPFCGLAVVEQLSGVRTGVEDPFLPIVENYGGQLWPHQADAV 354
BLAST of NO05G04890 vs. NCBI_GenBank
Match: OLC20517.1 (class II histone deacetylase [Chloroflexi bacterium 13_1_40CM_66_19] >OLC49912.1 class II histone deacetylase [Chloroflexi bacterium 13_1_40CM_4_65_16] >OLE72623.1 class II histone deacetylase [Actinobacteria bacterium 13_1_20CM_2_66_18]) HSP 1 Score: 385.2 bits (988), Expect = 2.500e-103 Identity = 189/365 (51.78%), Postives = 249/365 (68.22%), Query Frame = 0 Query: 20 TTGYVWHERYMWHHGGKYAW----NEWIQPTRHFESPESKRRLHNLLDASGLLEKLVRIPPRLATVEEITRFHTAEYVAKIQRLSAEYGGEAGDFATFGKGSYDIARLAVGGVLEAVDAVIEGRREGGEEGEVITNAYCLVRPPGHHAERDRGMGFCLFNNVALGALHAVAKHGLKRVAIVDYDVHHGNGTQQAFYKDPSVLFISIHQDSNYPAGTGYVEERGQEGGEGFTINIPLPPGSGSEAYYQAFDRVVLPAVRAFAPELLLVSSGYDAGFLDPLATMMLSSEHFRVLGQKMNGVAAEVCGGKIVYAHEGGYSDLYVPFCGHAVIEEMSGVKTEVKDCMLTDINHWGYHELQQHQDAVIKK 381 TTG+VWHE Y WH G AW +QP H E+ E KRR+ NL++ SGL++ LV + PR AT EEI HT+EYV +I+R S++ GG+AG+ FG GSYDIA LAVGG + AVDAV++G+ + NAY LVRPPGHHAERD G GFC+F NVAL A+HA GL RVA+VD+DVHHGNGT+ AFY DPSVL ISIHQD+NYP +G + + Y AF+R V+PA+RA+ PEL++++SG DA +DPLA+MM++S+ +R L Q M GVA EVC G++V HEGGYS YVP+CG A++EE++G++TE+ D +L + +G ELQ HQ+AVI++ Sbjct: 2 TTGFVWHELYAWHDTGTGAWVIPAGLTVQPLGHLENSEGKRRIRNLIEVSGLIDHLVMLKPRAATEEEILGLHTSEYVDRIRRESSQLGGDAGELTPFGPGSYDIALLAVGGCITAVDAVLDGK---------VDNAYALVRPPGHHAERDTGRGFCIFGNVALTAIHARQLRGLSRVAVVDWDVHHGNGTEHAFYDDPSVLTISIHQDNNYPPNSGAITDXXXXXXXXXXXXXXXXXXXXXXXYVAAFERAVVPALRAYQPELIIIASGLDASAMDPLASMMMTSDGYRKLTQLMLGVADEVCAGRLVMCHEGGYSPAYVPYCGLAIMEELAGMRTELADPLLDLLASFGGQELQPHQEAVIQE 357
BLAST of NO05G04890 vs. NCBI_GenBank
Match: WP_085124717.1 (class II histone deacetylase [Tistlia consotensis] >SMF55776.1 Acetoin utilization deacetylase AcuC [Tistlia consotensis USBA 355] >SNR89261.1 Acetoin utilization deacetylase AcuC [Tistlia consotensis]) HSP 1 Score: 384.4 bits (986), Expect = 4.200e-103 Identity = 189/363 (52.07%), Postives = 251/363 (69.15%), Query Frame = 0 Query: 21 TGYVWHERYMWHHGGKYAW----NEWIQPTRHFESPESKRRLHNLLDASGLLEKLVRIPPRLATVEEITRFHTAEYVAKIQRLSAEYGGEAGDFATFGKGSYDIARLAVGGVLEAVDAVIEGRREGGEEGEVITNAYCLVRPPGHHAERDRGMGFCLFNNVALGALHAVAKHGLKRVAIVDYDVHHGNGTQQAFYKDPSVLFISIHQDSNYPAGTGYVEERGQEGGEGFTINIPLPPGSGSEAYYQAFDRVVLPAVRAFAPELLLVSSGYDAGFLDPLATMMLSSEHFRVLGQKMNGVAAEVCGGKIVYAHEGGYSDLYVPFCGHAVIEEMSGVKTEVKDCMLTDINHWGYHELQQHQDAVIK 380 TG+V+HE YMWH+ +A + +QP H E+PE+KRR NLL+ SGLL++L+ + R A+ +EI RFHT +Y+ +I+R SA GG+A FG GS++IA+L+ GG + A DAVI G + NAY LVRPPGHHA D G+GFCLF NVAL +HA A HGL R+A VD+DVHHGNGTQ AFY DP+ L +SIHQD+ YP +G ++E G+ G G+ +NIPLPPGSG AY AF+RVVLPA+R F PEL++V SG+DA +DPL MM+SSE +R + + + A E+C G++V +HEGGYS YVP+CG AV+EE+SG +T V+D + WG L HQ+AVI+ Sbjct: 3 TGFVFHEIYMWHNTWNWAQVFPPSLTVQPGEHAENPETKRRFRNLLEVSGLLDRLLPLKARAASEDEIARFHTRDYIERIKRASAGSGGDASHLTPFGTGSFEIAQLSAGGTMAAFDAVITG---------AVRNAYALVRPPGHHAIADAGLGFCLFGNVALAIMHARAVHGLGRIATVDWDVHHGNGTQAAFYSDPTTLTLSIHQDNLYPPDSGGLDEIGEGAGRGYNLNIPLPPGSGDGAYLAAFERVVLPALRRFRPELIVVPSGFDASGVDPLGRMMVSSEGYRAMTRLLLDAADELCAGRLVMSHEGGYSATYVPYCGLAVLEELSGFRTGVEDPWGPLMAGWGGQALAPHQEAVIE 356
BLAST of NO05G04890 vs. NCBI_GenBank
Match: XP_001699864.1 (histone deacetylase [Chlamydomonas reinhardtii] >PNW87295.1 hypothetical protein CHLRE_02g116950v5 [Chlamydomonas reinhardtii]) HSP 1 Score: 380.6 bits (976), Expect = 6.100e-102 Identity = 191/385 (49.61%), Postives = 251/385 (65.19%), Query Frame = 0 Query: 15 TTKKSTTGYVWHERYMWHHGGKYA-WNEWIQPTRHFESPESKRRLHNLLDASGLLEKLVRIPPRLATVEEITRFHTAEYVAKIQRLSAEYG---GEAGDFATFGKGSYDIARLAVGGVLEAVDAVIEGRREGGEEGEVITNAYCLVRPPGHHAERDRGMGFCLFNNVALGALHAVAKHGLKRVAIVDYDVHHGNGTQQAFYKDPSVLFISIHQDSNYPAGTGYVEERGQEGGEGFTINIPLPPGSGSEAYYQAFDRVVLPAVRAFAPELLLVSSGYDAGFLDPLATMMLSSEHFRVLGQKMNGVAAEVCGGKIVYAHEGGYSDLYVPFCGHAVIEEMSGVKTEVKDCMLTDINHWGYHELQQHQDAVIKKCEVL-VDDLQKRMAA 395 T +K +TGY++HE Y WH+ G + E ++P RH+E+ E+KRR H L+ SGL ++L + PR AT EE+ R H Y+++++ +SA+ AGD ATF G Y+IA LA GG + A +AV+ G + NAY LVRPPGHHAERD GMGFC+FNNVA+ A HA+A HGLKRVAIVD+DVHHGNGTQ F DP VLFIS+HQDSNYP +GYV E Y AF+RVVLPA+ A+ PELLLVS+GYDA ++D LA M+LSS F + ++ A +CGG++V HEGGYS+LYVPFCG A ++ +SGV T V D L +++ WGY +LQQHQ A ++ +D L+ R+AA Sbjct: 3 TPEKVSTGYLFHESYFWHNPGFIQNFRENLEPWRHWENAETKRRFHGLVQVSGLFDQLQHLKPRHATEEELARVHDPAYISRVKEMSADESKGHHTAGDVATFAPGGYEIASLAAGGAIVATEAVLRGE---------LRNAYALVRPPGHHAERDHGMGFCIFNNVAVAAAHALAAHGLKRVAIVDFDVHHGNGTQHIFESDPRVLFISVHQDSNYPLRSGYVTEXXXXXXXXXXXXXXXXXXXXXXXYKAAFERVVLPALEAYRPELLLVSAGYDASYMDMLAAMILSSADFGWMMAQLKAAAERLCGGRLVALHEGGYSELYVPFCGLAALQSLSGVATAVADPWLHEVSAWGYQDLQQHQQAAVEAAAAAPLDRLRSRVAA 378
BLAST of NO05G04890 vs. NCBI_GenBank
Match: OUV85583.1 (hypothetical protein CBC94_01735 [Gammaproteobacteria bacterium TMED134]) HSP 1 Score: 380.6 bits (976), Expect = 6.100e-102 Identity = 193/379 (50.92%), Postives = 252/379 (66.49%), Query Frame = 0 Query: 21 TGYVWHERYMWHHGGKYAWNEWIQPTR-------HFESPESKRRLHNLLDASGLLEKLVRIPPRLATVEEITRFHTAEYVAKIQRLSAEYGGEAGDFATFGKGSYDIARLAVGGVLEAVDAVIEGRREGGEEGEVITNAYCLVRPPGHHAERDRGMGFCLFNNVALGALHAVAKHGLKRVAIVDYDVHHGNGTQQAFYKDPSVLFISIHQDSNYPAGTGYVEERGQEGGEGFTINIPLPPGSGSEAYYQAFDRVVLPAVRAFAPELLLVSSGYDAGFLDPLATMMLSSEHFRVLGQKMNGVAAEVCGGKIVYAHEGGYSDLYVPFCGHAVIEEMSGVKTEVKDCMLTDINHWGYHELQQH-QDAVIKKCEVLVDDLQKR 392 TG+VW ERYMWHH G +QPTR H E+ E+KR+L NLLDA + +KL +P A E + RFHTAEYV +++RLS GG+AG+ A G GS+DIA+LAVGG AV AV G + NAY L RPPGHHAERDRG GFCLFNN+AL +HA A+ + RVA+VD+DVHHGNGTQQAFY DP+VL IS+HQ+ +P G ++ERG++ GEGF INIPLP G G AY A + VVLPA+ F P+L++++ GYDA + DPL+ M+L + HFR++ Q+M A E+CGG++V HEGGYSD YVP CG AVIE + G+ + V D H +L+ H QDA+ + ++ L++R Sbjct: 3 TGFVWEERYMWHHNGAAV---GLQPTRGLFQPGLHLENAETKRKLKNLLDAYHITDKLSSLPVEAADRETLLRFHTAEYVDRVERLSHGTGGDAGESAWVGPGSFDIAKLAVGGSCAAVQAVCAGE---------VENAYALTRPPGHHAERDRGRGFCLFNNIALAIMHARAQGAVGRVAVVDWDVHHGNGTQQAFYDDPNVLTISVHQEMLFPVNLGKLDERGEDSGEGFNINIPLPAGCGGGAYLCALEEVVLPALHCFKPDLIIIACGYDACYFDPLSHMLLVANHFRLMTQRMMKAADELCGGRVVVNHEGGYSDFYVPLCGLAVIETLMGLSSGVVD-PYAGTEHVANQDLRPHQQDAINAASQGSLELLRRR 368
BLAST of NO05G04890 vs. NCBI_GenBank
Match: OUV80803.1 (hypothetical protein CBC94_12580 [Gammaproteobacteria bacterium TMED134]) HSP 1 Score: 380.2 bits (975), Expect = 8.000e-102 Identity = 193/379 (50.92%), Postives = 252/379 (66.49%), Query Frame = 0 Query: 21 TGYVWHERYMWHHGGKYAWNEWIQPTR-------HFESPESKRRLHNLLDASGLLEKLVRIPPRLATVEEITRFHTAEYVAKIQRLSAEYGGEAGDFATFGKGSYDIARLAVGGVLEAVDAVIEGRREGGEEGEVITNAYCLVRPPGHHAERDRGMGFCLFNNVALGALHAVAKHGLKRVAIVDYDVHHGNGTQQAFYKDPSVLFISIHQDSNYPAGTGYVEERGQEGGEGFTINIPLPPGSGSEAYYQAFDRVVLPAVRAFAPELLLVSSGYDAGFLDPLATMMLSSEHFRVLGQKMNGVAAEVCGGKIVYAHEGGYSDLYVPFCGHAVIEEMSGVKTEVKDCMLTDINHWGYHELQQH-QDAVIKKCEVLVDDLQKR 392 TG+VW ERYMWHH G +QPTR H E+ E+KR+L NLLDA + +KL +P A E + RFHTAEYV +++RLS GG+AG+ A G GS+DIA+LAVGG AV AV G + NAY L RPPGHHAERDRG GFCLFNN+AL +HA A+ + RVA+VD+DVHHGNGTQQAFY DP+VL IS+HQ+ +P G ++ERG++ GEGF INIPLP G G AY A + VVLPA+ F P+L++++ GYDA + DPL+ M+L + HFR++ Q+M A E+CGG++V HEGGYSD YVP CG AVIE + G+ + V D H +L+ H QDA+ + ++ L++R Sbjct: 3 TGFVWEERYMWHHNGAAV---GLQPTRGLFQPGLHLENAETKRKLKNLLDAYHITDKLSSLPVEAADRETLLRFHTAEYVDRVERLSHGTGGDAGESAWVGPGSFDIAKLAVGGSCAAVQAVCAGE---------VENAYALTRPPGHHAERDRGRGFCLFNNIALAIMHARAQGAVGRVAVVDWDVHHGNGTQQAFYDDPNVLTISVHQEMLFPVNLGKLDERGEDSGEGFNINIPLPAGCGGGAYLCALEEVVLPALHCFKPDLIIIACGYDACYFDPLSHMLLVANHFRLMTQRMMKXADELCGGRVVVNHEGGYSDFYVPLCGLAVIETLMGLSSGVVD-PYAGTEHVANQDLRPHQQDAINAASQGSLELLRRR 368 The following BLAST results are available for this feature:
BLAST of NO05G04890 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G04890 ID=NO05G04890|Name=NO05G04890|organism=Nannochloropsis oceanica|type=gene|length=5032bpback to top protein sequence of NO05G04890.1 >NO05G04890.1-protein ID=NO05G04890.1-protein|Name=NO05G04890.1|organism=Nannochloropsis oceanica|type=polypeptide|length=397bpback to top protein sequence of NO05G04890.2 >NO05G04890.2-protein ID=NO05G04890.2-protein|Name=NO05G04890.2|organism=Nannochloropsis oceanica|type=polypeptide|length=427bpback to top Synonyms
Publications
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