NO05G04890, NO05G04890 (gene) Nannochloropsis oceanica

Overview
NameNO05G04890
Unique NameNO05G04890
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5032
Alignment locationchr5:1265984..1271015 +

Link to JBrowse

Properties
Property NameValue
DescriptionHistone deacetylase superfamily protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:1265984..1271015 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0016575histone deacetylation
GO:0016043cellular component organization
GO:0006464cellular protein modification process
Vocabulary: Molecular Function
TermDefinition
GO:0004407histone deacetylase activity
GO:0016787hydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR023696Ureohydrolase_domain
IPR023801His_deacetylse_dom
IPR003084His_deacetylse_1
IPR000286His_deacetylse
Homology
BLAST of NO05G04890 vs. NCBI_GenBank
Match: EWM27914.1 (histone deacetylase superfamily protein [Nannochloropsis gaditana])

HSP 1 Score: 607.1 bits (1564), Expect = 4.000e-170
Identity = 294/397 (74.06%), Postives = 328/397 (82.62%), Query Frame = 0
Query:    1 MAANGGE-VHTASALTTKKSTTGYVWHERYMWHHGGKYAWNEWIQPTRHFESPESKRRLHNLLDASGLLEKLVRIPPRLATVEEITRFHTAEYVAKIQRLSAEYGGEAGDFATFGKGSYDIARLAVGGVLEAVDAVIEGRREGGEEGEVITNAYCLVRPPGHHAERDRGMGFCLFNNVALGALHAVAKHGLKRVAIVDYDVHHGNGTQQAFYKDPSVLFISIHQDSNYPAGTGYVEERGQEGGEGFTINIPLPPGSGSEAYYQAFDRVVLPAVRAFAPELLLVSSGYDAGFLDPLATMMLSSEHFRVLGQKMNGVAAEVCGGKIVYAHEGGYSDLYVPFCGHAVIEEMSGVKTEVKDCMLTDINHWGYHELQQHQDAVIKKCEVLVDDLQKRMAATK 397
            MAAN G     +SALT  KSTTGYVWHERYMWHH GKY WNEWIQPTRHFESPESKRRLHNLLDASGLL+ LVR+PPRLA+VEE+TRFHT EYV KIQ LS   GGEAGDFATFG GSY+IA LAVGGVL A+DAV+ GR + G++   + NAYCL RPPGHHAE+DRGMGFCLFNNVALGA+HA  K GLKRVAIVDYDVHHGNGTQQAFY+D +VLFISIHQDSNYPA TGYVEE G                    AY++AFDRV+LPAVRAFAPELLLVSSGYDAG+LDPLATMMLSSEHFR LGQK+NG+A +VC G+IVY HEGGYSDLYVPFCGHA++EE++  +T V+DCMLTD++ WGY ELQ HQDAVIKKCE LV  L++RMA  K
Sbjct:    1 MAANAGAGTKLSSALT--KSTTGYVWHERYMWHHAGKYTWNEWIQPTRHFESPESKRRLHNLLDASGLLDCLVRVPPRLASVEELTRFHTLEYVGKIQSLSRAQGGEAGDFATFGPGSYEIACLAVGGVLNAIDAVVTGRTDTGDK---VRNAYCLARPPGHHAEKDRGMGFCLFNNVALGAMHARVKQGLKRVAIVDYDVHHGNGTQQAFYEDEAVLFISIHQDSNYPAHTGYVEENGTXXXXXXXXXXXXXXXXXXXAYFEAFDRVILPAVRAFAPELLLVSSGYDAGYLDPLATMMLSSEHFRTLGQKLNGLAEDVCDGRIVYVHEGGYSDLYVPFCGHAIVEELTKRRTGVRDCMLTDVHQWGYQELQPHQDAVIKKCEALVTALKRRMAGMK 392          
BLAST of NO05G04890 vs. NCBI_GenBank
Match: KXZ50612.1 (hypothetical protein GPECTOR_15g295 [Gonium pectorale])

HSP 1 Score: 431.8 bits (1109), Expect = 2.300e-117
Identity = 212/378 (56.08%), Postives = 265/378 (70.11%), Query Frame = 0
Query:   21 TGYVWHERYMWHHGGKYA-WNEWIQPTRHFESPESKRRLHNLLDASGLLEKLVRIPPRLATVEEITRFHTAEYVAKIQRLSAEYG---GEAGDFATFGKGSYDIARLAVGGVLEAVDAVIEGRREGGEEGEVITNAYCLVRPPGHHAERDRGMGFCLFNNVALGALHAVAKHGLKRVAIVDYDVHHGNGTQQAFYKDPSVLFISIHQDSNYPAGTGYVEERGQEGGEGFTINIPLPPGSGSEAYYQAFDRVVLPAVRAFAPELLLVSSGYDAGFLDPLATMMLSSEHFRVLGQKMNGVAAEVCGGKIVYAHEGGYSDLYVPFCGHAVIEEMSGVKTEVKDCMLTDINHWGYHELQQHQDAVIKKCEVLVDDLQKRMAA 395
            TGY++HE Y WH+ G    +   ++  RH+E+PE+KRR HNL+  SGLLE+L  + PR AT  E+ R H  +Y+ +++ +SA+       AGD ATF  G YDIA LA GG +EAVDAV+ GR         + NAY LVRPPGHHAER  GMGFC+FNNVA+ A HA+  HGL RVA+VD+DVHHGNGTQ AF  DP VLFIS+HQDSNYP  +GYV E G   GEG T+N+PLPPGSGS AY  AF+RVVLPA+ A+ P+LLLVS+GYDA ++D LA M+LSS  F  +  ++   A  +CGG++V  HEGGYS+LYVPFC  A +EEMSGVKTEVKD  L ++  WGY ELQ HQDA +   E L+  L+   AA
Sbjct:    8 TGYLYHESYFWHNAGHIQNFRAHVEAWRHWENPETKRRFHNLVAVSGLLEQLTHLKPRPATEAELARIHCPDYIRRVREMSADESKGHHTAGDVATFAPGGYDIAALAAGGAIEAVDAVMAGR---------VRNAYALVRPPGHHAERAEGMGFCIFNNVAVAAAHALEVHGLARVAVVDFDVHHGNGTQHAFEADPRVLFISVHQDSNYPLRSGYVTENGVGAGEGTTLNVPLPPGSGSGAYRAAFERVVLPALEAYGPQLLLVSAGYDASYMDMLAAMILSSADFGWMMGRLVEAAGRLCGGRLVALHEGGYSELYVPFCALAALEEMSGVKTEVKDPWLHEVTSWGYQELQPHQDAAVAAAEQLLPKLRTVAAA 376          
BLAST of NO05G04890 vs. NCBI_GenBank
Match: XP_002900512.1 (histone deacetylase, putative [Phytophthora infestans T30-4] >EEY59827.1 histone deacetylase, putative [Phytophthora infestans T30-4])

HSP 1 Score: 407.9 bits (1047), Expect = 3.600e-110
Identity = 195/363 (53.72%), Postives = 265/363 (73.00%), Query Frame = 0
Query:   22 GYVWHERYMWHHGGKYAWNEWIQPTRHFESPESKRRLHNLLDASGLLEKLVRIPPRLATVEEITRFHTAEYVAKIQRLSA-EYGGEAGDFATFGKGSYDIARLAVGGVLEAVDAVIEGRREGGEEGEVITNAYCLVRPPGHHAERDRGMGFCLFNNVALGALHAVAKHG--LKRVAIVDYDVHHGNGTQQAFYKDPSVLFISIHQDSNYPAGTGYVEERGQEGGEGFTINIPLPPGSGSEAYYQAFDRVVLPAVRAFAPELLLVSSGYDAGFLDPLATMMLSSEHFRVLGQKMNGVAAEVCGGKIVYAHEGGYSDLYVPFCGHAVIEEMSGVK---TEVKDCMLTDINHWGYHELQQHQDAVI 379
            GYV+ ERY+WH      ++ +++P RH+ESPE+KRR H+LL  SGLL++LV I P++AT+ ++ R HT  Y+ ++++LSA E GG AG+ A F + ++DIARL+ GGVL AVDAV+EGR         +  AY L RPPGHHA  DRGMGFCL NNVA+ A H +  +   +K++AIVDYDVHHGNGTQ+AFY D  VLF+S+HQ +NYPA TG + ERG++ G GFT+N+PLPPGSGS AY  AF  VV+P++ +F P+ +LVSSG+DA + DPLA M+LSS  FR +  ++  VA  +C G+IV+AHEGGYS+ YVPFCG AVIEE+ G++    ++KD  L+++  W Y ELQ+HQ  V+
Sbjct:    4 GYVYDERYLWHRPWSQQYSAFVEPFRHWESPETKRRFHSLLAVSGLLDQLVTIRPQIATMIQLERVHTRRYLEELEQLSAREEGGNAGEEAPFSQLAFDIARLSAGGVLAAVDAVMEGR---------VDTAYALTRPPGHHAVADRGMGFCLLNNVAITAKHLLETYSSQIKKIAIVDYDVHHGNGTQEAFYDDDRVLFVSLHQANNYPADTGKITERGEDKGLGFTVNVPLPPGSGSGAYEYAFRNVVIPSLESFKPDFVLVSSGFDASYADPLAAMILSSSVFRFMAHEVVDVAKRICAGRIVFAHEGGYSETYVPFCGAAVIEELLGIQDVDKQIKDPFLSEVERWEYQELQEHQKKVV 357          
BLAST of NO05G04890 vs. NCBI_GenBank
Match: WP_019528998.1 (class II histone deacetylase [Dasania marina])

HSP 1 Score: 387.5 bits (994), Expect = 5.000e-104
Identity = 195/382 (51.05%), Postives = 254/382 (66.49%), Query Frame = 0
Query:   12 SALTTKKSTTGYVWHERYMWHHGGKYA----WNEWIQPTRHFESPESKRRLHNLLDASGLLEKLVRIPPRLATVEEITRFHTAEYVAKIQRLSAEYGGEAGDFATFGKGSYDIARLAVGGVLEAVDAVIEGRREGGEEGEVITNAYCLVRPPGHHAERDRGMGFCLFNNVALGALHAVAKHGLKRVAIVDYDVHHGNGTQQAFYKDPSVLFISIHQDSNYPAGTGYVEERGQEGGEGFTINIPLPPGSGSEAYYQAFDRVVLPAVRAFAPELLLVSSGYDAGFLDPLATMMLSSEHFRVLGQKMNGVAAEVCGGKIVYAHEGGYSDLYVPFCGHAVIEEMSGVKTEVKDCMLTDINHWGYHELQQHQDAVIKKCEVLVDDLQ 390
            ++ T K   TG+++HE YMWH+ G YA    +   +QP  H E+PE+KRR  NLL+ SGLL KL  I  R AT  EI R HT E++  I+ LSA +GG+ G F+  G+G+YDIA L+ GGV+ AVDAV+ G          + NAY LVRPPGHHA  D  MGFC+F N  L  LHA+    LKR+A VD+DVHHGNGTQ  F++DP  L ISIHQD  +PA +G+  E G   GEG+ +NIPLPPGSG  AY  AFDRVV+PA++A+ PEL++V SG+DAG  DP+  M + SE +R L +K+  VA EVC G++V  HEGGY+   VPF G AV+EE+SG+KT+V D  L  +   G  +LQ HQD  I+  E L+ +L+
Sbjct:    2 TSATNKSLKTGFMYHEIYMWHNTGNYAGIMPYGNPVQPGEHVENPETKRRFRNLLEVSGLLAKLESIQARPATEAEILRHHTREHLDNIKALSAAHGGDGGIFSPVGRGTYDIALLSAGGVISAVDAVLNGE---------VDNAYALVRPPGHHALADMAMGFCMFANAVLAGLHALEVRALKRIATVDWDVHHGNGTQAGFWEDPRALTISIHQDRCFPADSGFTTEIGTGAGEGYNMNIPLPPGSGVGAYEAAFDRVVIPALQAYKPELIIVPSGFDAGAHDPMGRMQMHSEGYRNLTRKIMKVADEVCDGRVVMCHEGGYNPATVPFYGLAVLEELSGIKTDVTDPFLEIMAALGGQDLQPHQDEAIRAAEALLANLK 374          
BLAST of NO05G04890 vs. NCBI_GenBank
Match: WP_073264608.1 (class II histone deacetylase [Cryptosporangium aurantiacum] >SHN47070.1 Acetoin utilization deacetylase AcuC [Cryptosporangium aurantiacum])

HSP 1 Score: 385.6 bits (989), Expect = 1.900e-103
Identity = 199/361 (55.12%), Postives = 241/361 (66.76%), Query Frame = 0
Query:   21 TGYVWHERYMWHH----GGKYAWNEWIQPTRHFESPESKRRLHNLLDASGLLEKLVRIPPRLATVEEITRFHTAEYVAKIQRLSAEYGGEAGDFATFGKGSYDIARLAVGGVLEAVDAVIEGRREGGEEGEVITNAYCLVRPPGHHAERDRGMGFCLFNNVALGALHAVAKHGLKRVAIVDYDVHHGNGTQQAFYKDPSVLFISIHQDSNYPAGTGYVEERGQEGGEGFTINIPLPPGSGSEAYYQAFDRVVLPAVRAFAPELLLVSSGYDAGFLDPLATMMLSSEHFRVLGQKMNGVAAEVCGGKIVYAHEGGYSDLYVPFCGHAVIEEMSGVKTEVKDCMLTDINHWGYHELQQHQDAV 378
            TG+VWHERYMWH     GG    + W++P  H ESP++KRR  NL+ ASGLLE L  + PR ATV E+TR H  EYVA + R +A  GG  G    FG+ SY+IA LA GGVL AV+AV          G V+ NAY LVRPPGHHA  D G GFCLFNNVA+ A HA A  GL+R+AIVD+DVHHGNGTQ  F+ DPSVL +SIHQD  YP  +G V + G  G EG TIN+PLPPGSG  AY  AF  VV PA+  FAP+L+LV+ G+DA   DPLA  MLSSE FR L +++   AA  C G++V AHEGGYS   VPFCG AV+E++SGV+T V+D  L  + ++G        DAV
Sbjct:    3 TGWVWHERYMWHDTGTAGGPLPVSRWVEPMEHVESPDAKRRFANLVSASGLLEHLTPLAPRPATVAELTRVHLPEYVADVDRQAAAGGGNLGGGTPFGEFSYEIALLAAGGVLAAVEAV---------AGGVVDNAYALVRPPGHHATPDHGRGFCLFNNVAVAARHAQATLGLERIAIVDWDVHHGNGTQDTFWDDPSVLAVSIHQDGVYPPQSGPVTDVGGPGAEGTTINVPLPPGSGDGAYRAAFTEVVEPALDRFAPDLILVACGFDANGFDPLARQMLSSESFRELTRRVADAAARHCDGRLVLAHEGGYSPFAVPFCGLAVVEQLSGVRTGVEDPFLPIVENYGGQLWPHQADAV 354          
BLAST of NO05G04890 vs. NCBI_GenBank
Match: OLC20517.1 (class II histone deacetylase [Chloroflexi bacterium 13_1_40CM_66_19] >OLC49912.1 class II histone deacetylase [Chloroflexi bacterium 13_1_40CM_4_65_16] >OLE72623.1 class II histone deacetylase [Actinobacteria bacterium 13_1_20CM_2_66_18])

HSP 1 Score: 385.2 bits (988), Expect = 2.500e-103
Identity = 189/365 (51.78%), Postives = 249/365 (68.22%), Query Frame = 0
Query:   20 TTGYVWHERYMWHHGGKYAW----NEWIQPTRHFESPESKRRLHNLLDASGLLEKLVRIPPRLATVEEITRFHTAEYVAKIQRLSAEYGGEAGDFATFGKGSYDIARLAVGGVLEAVDAVIEGRREGGEEGEVITNAYCLVRPPGHHAERDRGMGFCLFNNVALGALHAVAKHGLKRVAIVDYDVHHGNGTQQAFYKDPSVLFISIHQDSNYPAGTGYVEERGQEGGEGFTINIPLPPGSGSEAYYQAFDRVVLPAVRAFAPELLLVSSGYDAGFLDPLATMMLSSEHFRVLGQKMNGVAAEVCGGKIVYAHEGGYSDLYVPFCGHAVIEEMSGVKTEVKDCMLTDINHWGYHELQQHQDAVIKK 381
            TTG+VWHE Y WH  G  AW       +QP  H E+ E KRR+ NL++ SGL++ LV + PR AT EEI   HT+EYV +I+R S++ GG+AG+   FG GSYDIA LAVGG + AVDAV++G+         + NAY LVRPPGHHAERD G GFC+F NVAL A+HA    GL RVA+VD+DVHHGNGT+ AFY DPSVL ISIHQD+NYP  +G + +                       Y  AF+R V+PA+RA+ PEL++++SG DA  +DPLA+MM++S+ +R L Q M GVA EVC G++V  HEGGYS  YVP+CG A++EE++G++TE+ D +L  +  +G  ELQ HQ+AVI++
Sbjct:    2 TTGFVWHELYAWHDTGTGAWVIPAGLTVQPLGHLENSEGKRRIRNLIEVSGLIDHLVMLKPRAATEEEILGLHTSEYVDRIRRESSQLGGDAGELTPFGPGSYDIALLAVGGCITAVDAVLDGK---------VDNAYALVRPPGHHAERDTGRGFCIFGNVALTAIHARQLRGLSRVAVVDWDVHHGNGTEHAFYDDPSVLTISIHQDNNYPPNSGAITDXXXXXXXXXXXXXXXXXXXXXXXYVAAFERAVVPALRAYQPELIIIASGLDASAMDPLASMMMTSDGYRKLTQLMLGVADEVCAGRLVMCHEGGYSPAYVPYCGLAIMEELAGMRTELADPLLDLLASFGGQELQPHQEAVIQE 357          
BLAST of NO05G04890 vs. NCBI_GenBank
Match: WP_085124717.1 (class II histone deacetylase [Tistlia consotensis] >SMF55776.1 Acetoin utilization deacetylase AcuC [Tistlia consotensis USBA 355] >SNR89261.1 Acetoin utilization deacetylase AcuC [Tistlia consotensis])

HSP 1 Score: 384.4 bits (986), Expect = 4.200e-103
Identity = 189/363 (52.07%), Postives = 251/363 (69.15%), Query Frame = 0
Query:   21 TGYVWHERYMWHHGGKYAW----NEWIQPTRHFESPESKRRLHNLLDASGLLEKLVRIPPRLATVEEITRFHTAEYVAKIQRLSAEYGGEAGDFATFGKGSYDIARLAVGGVLEAVDAVIEGRREGGEEGEVITNAYCLVRPPGHHAERDRGMGFCLFNNVALGALHAVAKHGLKRVAIVDYDVHHGNGTQQAFYKDPSVLFISIHQDSNYPAGTGYVEERGQEGGEGFTINIPLPPGSGSEAYYQAFDRVVLPAVRAFAPELLLVSSGYDAGFLDPLATMMLSSEHFRVLGQKMNGVAAEVCGGKIVYAHEGGYSDLYVPFCGHAVIEEMSGVKTEVKDCMLTDINHWGYHELQQHQDAVIK 380
            TG+V+HE YMWH+   +A     +  +QP  H E+PE+KRR  NLL+ SGLL++L+ +  R A+ +EI RFHT +Y+ +I+R SA  GG+A     FG GS++IA+L+ GG + A DAVI G          + NAY LVRPPGHHA  D G+GFCLF NVAL  +HA A HGL R+A VD+DVHHGNGTQ AFY DP+ L +SIHQD+ YP  +G ++E G+  G G+ +NIPLPPGSG  AY  AF+RVVLPA+R F PEL++V SG+DA  +DPL  MM+SSE +R + + +   A E+C G++V +HEGGYS  YVP+CG AV+EE+SG +T V+D     +  WG   L  HQ+AVI+
Sbjct:    3 TGFVFHEIYMWHNTWNWAQVFPPSLTVQPGEHAENPETKRRFRNLLEVSGLLDRLLPLKARAASEDEIARFHTRDYIERIKRASAGSGGDASHLTPFGTGSFEIAQLSAGGTMAAFDAVITG---------AVRNAYALVRPPGHHAIADAGLGFCLFGNVALAIMHARAVHGLGRIATVDWDVHHGNGTQAAFYSDPTTLTLSIHQDNLYPPDSGGLDEIGEGAGRGYNLNIPLPPGSGDGAYLAAFERVVLPALRRFRPELIVVPSGFDASGVDPLGRMMVSSEGYRAMTRLLLDAADELCAGRLVMSHEGGYSATYVPYCGLAVLEELSGFRTGVEDPWGPLMAGWGGQALAPHQEAVIE 356          
BLAST of NO05G04890 vs. NCBI_GenBank
Match: XP_001699864.1 (histone deacetylase [Chlamydomonas reinhardtii] >PNW87295.1 hypothetical protein CHLRE_02g116950v5 [Chlamydomonas reinhardtii])

HSP 1 Score: 380.6 bits (976), Expect = 6.100e-102
Identity = 191/385 (49.61%), Postives = 251/385 (65.19%), Query Frame = 0
Query:   15 TTKKSTTGYVWHERYMWHHGGKYA-WNEWIQPTRHFESPESKRRLHNLLDASGLLEKLVRIPPRLATVEEITRFHTAEYVAKIQRLSAEYG---GEAGDFATFGKGSYDIARLAVGGVLEAVDAVIEGRREGGEEGEVITNAYCLVRPPGHHAERDRGMGFCLFNNVALGALHAVAKHGLKRVAIVDYDVHHGNGTQQAFYKDPSVLFISIHQDSNYPAGTGYVEERGQEGGEGFTINIPLPPGSGSEAYYQAFDRVVLPAVRAFAPELLLVSSGYDAGFLDPLATMMLSSEHFRVLGQKMNGVAAEVCGGKIVYAHEGGYSDLYVPFCGHAVIEEMSGVKTEVKDCMLTDINHWGYHELQQHQDAVIKKCEVL-VDDLQKRMAA 395
            T +K +TGY++HE Y WH+ G    + E ++P RH+E+ E+KRR H L+  SGL ++L  + PR AT EE+ R H   Y+++++ +SA+       AGD ATF  G Y+IA LA GG + A +AV+ G          + NAY LVRPPGHHAERD GMGFC+FNNVA+ A HA+A HGLKRVAIVD+DVHHGNGTQ  F  DP VLFIS+HQDSNYP  +GYV E                       Y  AF+RVVLPA+ A+ PELLLVS+GYDA ++D LA M+LSS  F  +  ++   A  +CGG++V  HEGGYS+LYVPFCG A ++ +SGV T V D  L +++ WGY +LQQHQ A ++      +D L+ R+AA
Sbjct:    3 TPEKVSTGYLFHESYFWHNPGFIQNFRENLEPWRHWENAETKRRFHGLVQVSGLFDQLQHLKPRHATEEELARVHDPAYISRVKEMSADESKGHHTAGDVATFAPGGYEIASLAAGGAIVATEAVLRGE---------LRNAYALVRPPGHHAERDHGMGFCIFNNVAVAAAHALAAHGLKRVAIVDFDVHHGNGTQHIFESDPRVLFISVHQDSNYPLRSGYVTEXXXXXXXXXXXXXXXXXXXXXXXYKAAFERVVLPALEAYRPELLLVSAGYDASYMDMLAAMILSSADFGWMMAQLKAAAERLCGGRLVALHEGGYSELYVPFCGLAALQSLSGVATAVADPWLHEVSAWGYQDLQQHQQAAVEAAAAAPLDRLRSRVAA 378          
BLAST of NO05G04890 vs. NCBI_GenBank
Match: OUV85583.1 (hypothetical protein CBC94_01735 [Gammaproteobacteria bacterium TMED134])

HSP 1 Score: 380.6 bits (976), Expect = 6.100e-102
Identity = 193/379 (50.92%), Postives = 252/379 (66.49%), Query Frame = 0
Query:   21 TGYVWHERYMWHHGGKYAWNEWIQPTR-------HFESPESKRRLHNLLDASGLLEKLVRIPPRLATVEEITRFHTAEYVAKIQRLSAEYGGEAGDFATFGKGSYDIARLAVGGVLEAVDAVIEGRREGGEEGEVITNAYCLVRPPGHHAERDRGMGFCLFNNVALGALHAVAKHGLKRVAIVDYDVHHGNGTQQAFYKDPSVLFISIHQDSNYPAGTGYVEERGQEGGEGFTINIPLPPGSGSEAYYQAFDRVVLPAVRAFAPELLLVSSGYDAGFLDPLATMMLSSEHFRVLGQKMNGVAAEVCGGKIVYAHEGGYSDLYVPFCGHAVIEEMSGVKTEVKDCMLTDINHWGYHELQQH-QDAVIKKCEVLVDDLQKR 392
            TG+VW ERYMWHH G       +QPTR       H E+ E+KR+L NLLDA  + +KL  +P   A  E + RFHTAEYV +++RLS   GG+AG+ A  G GS+DIA+LAVGG   AV AV  G          + NAY L RPPGHHAERDRG GFCLFNN+AL  +HA A+  + RVA+VD+DVHHGNGTQQAFY DP+VL IS+HQ+  +P   G ++ERG++ GEGF INIPLP G G  AY  A + VVLPA+  F P+L++++ GYDA + DPL+ M+L + HFR++ Q+M   A E+CGG++V  HEGGYSD YVP CG AVIE + G+ + V D       H    +L+ H QDA+    +  ++ L++R
Sbjct:    3 TGFVWEERYMWHHNGAAV---GLQPTRGLFQPGLHLENAETKRKLKNLLDAYHITDKLSSLPVEAADRETLLRFHTAEYVDRVERLSHGTGGDAGESAWVGPGSFDIAKLAVGGSCAAVQAVCAGE---------VENAYALTRPPGHHAERDRGRGFCLFNNIALAIMHARAQGAVGRVAVVDWDVHHGNGTQQAFYDDPNVLTISVHQEMLFPVNLGKLDERGEDSGEGFNINIPLPAGCGGGAYLCALEEVVLPALHCFKPDLIIIACGYDACYFDPLSHMLLVANHFRLMTQRMMKAADELCGGRVVVNHEGGYSDFYVPLCGLAVIETLMGLSSGVVD-PYAGTEHVANQDLRPHQQDAINAASQGSLELLRRR 368          
BLAST of NO05G04890 vs. NCBI_GenBank
Match: OUV80803.1 (hypothetical protein CBC94_12580 [Gammaproteobacteria bacterium TMED134])

HSP 1 Score: 380.2 bits (975), Expect = 8.000e-102
Identity = 193/379 (50.92%), Postives = 252/379 (66.49%), Query Frame = 0
Query:   21 TGYVWHERYMWHHGGKYAWNEWIQPTR-------HFESPESKRRLHNLLDASGLLEKLVRIPPRLATVEEITRFHTAEYVAKIQRLSAEYGGEAGDFATFGKGSYDIARLAVGGVLEAVDAVIEGRREGGEEGEVITNAYCLVRPPGHHAERDRGMGFCLFNNVALGALHAVAKHGLKRVAIVDYDVHHGNGTQQAFYKDPSVLFISIHQDSNYPAGTGYVEERGQEGGEGFTINIPLPPGSGSEAYYQAFDRVVLPAVRAFAPELLLVSSGYDAGFLDPLATMMLSSEHFRVLGQKMNGVAAEVCGGKIVYAHEGGYSDLYVPFCGHAVIEEMSGVKTEVKDCMLTDINHWGYHELQQH-QDAVIKKCEVLVDDLQKR 392
            TG+VW ERYMWHH G       +QPTR       H E+ E+KR+L NLLDA  + +KL  +P   A  E + RFHTAEYV +++RLS   GG+AG+ A  G GS+DIA+LAVGG   AV AV  G          + NAY L RPPGHHAERDRG GFCLFNN+AL  +HA A+  + RVA+VD+DVHHGNGTQQAFY DP+VL IS+HQ+  +P   G ++ERG++ GEGF INIPLP G G  AY  A + VVLPA+  F P+L++++ GYDA + DPL+ M+L + HFR++ Q+M   A E+CGG++V  HEGGYSD YVP CG AVIE + G+ + V D       H    +L+ H QDA+    +  ++ L++R
Sbjct:    3 TGFVWEERYMWHHNGAAV---GLQPTRGLFQPGLHLENAETKRKLKNLLDAYHITDKLSSLPVEAADRETLLRFHTAEYVDRVERLSHGTGGDAGESAWVGPGSFDIAKLAVGGSCAAVQAVCAGE---------VENAYALTRPPGHHAERDRGRGFCLFNNIALAIMHARAQGAVGRVAVVDWDVHHGNGTQQAFYDDPNVLTISVHQEMLFPVNLGKLDERGEDSGEGFNINIPLPAGCGGGAYLCALEEVVLPALHCFKPDLIIIACGYDACYFDPLSHMLLVANHFRLMTQRMMKXADELCGGRVVVNHEGGYSDFYVPLCGLAVIETLMGLSSGVVD-PYAGTEHVANQDLRPHQQDAINAASQGSLELLRRR 368          
The following BLAST results are available for this feature:
BLAST of NO05G04890 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27914.14.000e-17074.06histone deacetylase superfamily protein [Nannochlo... [more]
KXZ50612.12.300e-11756.08hypothetical protein GPECTOR_15g295 [Gonium pector... [more]
XP_002900512.13.600e-11053.72histone deacetylase, putative [Phytophthora infest... [more]
WP_019528998.15.000e-10451.05class II histone deacetylase [Dasania marina][more]
WP_073264608.11.900e-10355.12class II histone deacetylase [Cryptosporangium aur... [more]
OLC20517.12.500e-10351.78class II histone deacetylase [Chloroflexi bacteriu... [more]
WP_085124717.14.200e-10352.07class II histone deacetylase [Tistlia consotensis]... [more]
XP_001699864.16.100e-10249.61histone deacetylase [Chlamydomonas reinhardtii] >P... [more]
OUV85583.16.100e-10250.92hypothetical protein CBC94_01735 [Gammaproteobacte... [more]
OUV80803.18.000e-10250.92hypothetical protein CBC94_12580 [Gammaproteobacte... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL085nonsL085Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR117ngnoR117Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G04890.1NO05G04890.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO05G04890.2NO05G04890.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|585275gene_3307Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100267g2gene2653Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G04890.1NO05G04890.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO05G04890.2NO05G04890.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G04890 ID=NO05G04890|Name=NO05G04890|organism=Nannochloropsis oceanica|type=gene|length=5032bp
TTCTCCTCTCTATTTCGATTGATTCTTTACAAACGGTAATCTCATTCCTC
AGGGTGGCGTCCGTCGAGGCCTCGCCGCGTTTGCACACACTCAAGTCCTA
CTCTACATGTAATCCTTTCCCGTTTTTGTCATCCATTAACAACCAACAAC
TAAGTCTCATTGTCTCAACTTCAACCTCCTTTCACTTTTCACCCACACAC
ACGTCCTCAGCCACCTCCCTTTCCTCCGCTTCATCGCTATCCACCTGCTT
CTTGACCGCGCCTGCTGCAGTAGCAACAGCAGCGGTAGCAGCGGTAGCAG
CGGTAACAGAATCATCGCTTCCTCTCCCATGCAGGATAAGGAATTCATCG
TGCACCTCTTGCAGTTTTTGTACCTCCGTCTCGTACGCACGCATGGCCGA
TTCAATCGCAGTCGAGGAGGAGGAGGAGCAGGATGAAGAAGAGGAAGGGT
TGAATGAAGAGGGGGCAACAGATGATGAAGCGAAATGAGGTGGATATCGA
AGTGGTGACGGGGGCAGGTGGCAGGCCACAGGCAATGACAGGAATGTAGG
CGGCGGCATCGGCATGAGCGGGGCACACGTGAGTGGCGGCATCGCCACCG
GCCGTGATAGTGATGGTTGTGTGAACTCGGGCTTTGGAAAAGACAGTGAC
AACGGTATGTGAGGATTTCCTGTTATTTGTTCCTGCTCCGCCTCCATGCC
TGGTTTCCTCTCTGCCCTCCCTCCCAAGCAATGCAAAGCCTTCGTTGACG
ACGCTAACAAATCCCGCAACGTCCTCACTTCCTCCCTTAATCCCTCCAAC
TCTGCCTCATCCTCCCTCGCATGCTGCCGCGTTTTCTCATTCTCATTCTC
TAGATTTGCGCATGTCCGCTCAAGATTTCTAACCATGGCCGTTGCCTCCT
GCTCTCGTGCCCAGGCCTCCTCCTCCTGCCTCTGCAACCGCTCTCTCGCT
ACAACCCACCGCTCCTTCTCCTTCCTCAACATCTCCACCTCTTCCACGCA
ACCCCTCGCTTCCTCCACTTGCCTTCGTAATGCTTGCATATCTGCTCTCT
GCTCCTGATACACCAATCTTTCGGCTTGTGCTTTTCGAAGCTCTTCCTGG
ACAAGGTGCTGTTGGACCTGCAGGCTCTGTTGCTGCGATGCGTATGCCTT
CGCGCCATCTTGGTGAGCAGCTGCTGTCTCCCCCGCACGTTGTCGAGCCC
ATGCAGCGATTTGCTCTCTGAACGTGAATTGTTCTTTGTCTAGGATTGCC
TGTCGTTCTGCGGCTCGTGCCTCTGCTCGTTCCACCTCTTCCTTGCGTCG
TCGCATGGCCTCCATATCACGTAACACCGCCTGTCGCGCCTCGAATTGAG
CTGCCTCCGCTGCTTGTAACCGGACACGAACACGACGTTCCTCCTCTTTA
GCTTGTGCCCATGCCTGCTCCACTTTCCGGTCTTGCGTCGCTTGCATTTC
CTCGCGGACAATTAATAGCTCCCGTCGGTGCTTCGCGGCCTCTTCCAACC
TGAGGTGTGTCAGCTCCGTCTCCCGAAAATGAGATATCTCCGCAGCTATT
TCCTTCTGGGCGCGAGCTTCGCATTCTTGTTGGAATCGACTCAGATGTTT
CTCGTGCTGGTGCTGGTGGAGGGGGGAAGGGGGTTGTGTAAGGGAAGGGG
TGGTAGTCGTCGTCGAAACTGCCTCAGTTTGGGTTTGAGTGTGGGAGGAA
GAGGAAGAGGAGACGACGGCTGGCTCGGCTCTTTGAAAAGGTAGCACCAA
TGCGTGAAGGAGACTTTTGTGTTCTGATTCACCTTTGCTCTGCGCCAGCA
TCAACGTCTCAGCCAGGTCGTGTCGTGACAGGAGGTGTTGCTGGACCAGC
ATGTGACTCTCAGGCAAGAACACCGCCAATGTCTGGCGAAATTTTTGGTG
CCGCAGGAAATCGACGACAAGGCTATTGAGAACCATGTTTTCCAAAGACA
TGCCGGGGCATGGATGCACTTTTTGGTCTTCATGGATATTGGCTCGTGCC
AGTGGTCTCAACAGGTGACCGCGGAGCTGCCCTAAAATATCGTCGATGGC
GCCAGATTCCCGCAGCTTTTTCCGCACCAACATTTTGAGTTCAGAAAGGG
TAAGGTGGTTGCTATCATGATCTTCATCTTCGTTTTCTTCTTTCTTGGGA
TCTAGCGGTAAGCCAGCAGGAGAAAGAGGAGGCGTAGGAGTAGGAGTGGA
GGTAGGCCCCATGGGCCTGATCGATTGCGTTTTTGTGGAAGGAAAAAATA
AGGACGACATTTCGATGAAAGACAAGTTGGTGAAGCCAAAAGCAGGGAAG
TAGAGTTGTTGAAATGAATGAGCATATGGTGATAGTGCCCATTATTTGTG
ATGTTTTTGCAGGAGTAGGGGGCAAAAAAGTGCTACAATGGTCAAATAGT
GGGGGCATGGTGAGTGCGCGAGGTCTCGTTTTGATGCTCCTCTGAGTCGC
TCCTTGCTTTAAGTCCGCGTGCCTTCCTTCGTCCTCTCTCACTCCCTACG
TACACTATGCCACAGCCTTGAGCCTCGTCCCTTGCCTGCGCCCGTGCGTT
CAGATCTCCTGTAGGGTTGCCGCTTTCTCTCGTCTCTCCACCATTCGCTC
GATTGGTGGTACTTGAGCAACATACATACGTCGTCATCGCATCGTCATAT
CAGCTGATACAGCAGACGCAGAGGCAGCATGGCCGCCAACGGAGGAGAGG
TGCACACCGCGTCCGCCTTGACGACCAAGAAGAGCACGACAGGCTACGTC
TGGCATGAGCGCTACATGTGGCACCATGGCGGGAAGTACGCGTGGAAgta
agtcacatcgtccattccttacgtacaccctccaccttgcttcatctcgc
cgcctcagtcactccacactcacgcacatacgactcttcctcaccataaa
ttgtacatcgcagTGAGTGGATCCAGCCCACCCGGCACTTTGAGTCTCCC
GAGTCCAAGCGCCGTCTGCACAACCTCCTGGATGCCAGCGGCCTCCTCGA
AAAgtaagtgtttccagcttcccactcctcttcctcctgctttattccgt
acaatttaatgttccagtggtctttaccatctccttatttttctcacaga
taactcacgtcgcaatctaaagtgctcctctctccctccttaccatccac
tctcagGCTCGTTCGCATCCCTCCCCGTCTTGCCACCGTGGAAGAGATTA
CTCGCTTCCACACTGCCGAATACGTGGCTAAGATCCAAAGATTAAGTGCG
GAATATGGGGGCGAAGCAGGGGATTTTGCAACGTTTGGAAAAGGGTCGTA
TGACATTGCGCGACTGGCCGTGGGAGGGGTGTTGGAGGCGGTGGATGCGG
TGATCGAGGGAAGGAGAGAAGGAGGGGAGGAGGGAGAGGTGATCACGAAT
GCGTACTGCCTCGTTAGACCGCCGGGACACCACGCGGAGAGGGATCGGGG
GATGGGCTTCTGTTTATTTAATAACGTGGCGTTGGGCGCATTGCACGCCG
TGGCCAAGCACGGGTTGAAACGGGTGGCGATTGTGGATTATGACGTTCAC
CATGGCAACGGCACACAGgcatgtactcctccctccgtctacctgcaatc
ccacccccttcttttttatgtcgctattcttccccatagtaccccctcca
ctcatgtggcctgtttcacctcttttcgacgcgaatctgacttaccttcc
ttcccccttctcccccctcctcccctctctccttccctccctctttggca
gCAAGCTTTCTACAAGGACCCGTCCGTCCTCTTCATTTCCATCCATCAAG
ACAGCAACTATCCCGCTGGGACCGGCTACGTCGAGGAACGGGGGCAGGAA
GGGGGGGAGGGCTTCACGATCAACATTCCTCTTCCTCCAGGGAGTGGGAG
CGAGGCCTACTATCAGGCATTTGATCGCGTGGTGCTTCCGGCGGTTCGGg
tgagtggctcgggaggaaaggagagaataagggagggaaggggaaggata
ctcgtgcattctgatagtcgatattatacacattggtttttgatgcctct
ccctccctccctctcttccttcctccctccctccctcagGCCTTCGCCCC
TGAGCTGCTCTTGGTCTCCTCCGGGTACGACGCCGGCTTTCTCGACCCCC
TCGCCACAATGATGCTTTCGTCGGAGCATTTTCGAGTGCTGGGGCAGAAA
ATGAACGGGGTGGCAGCGGAAGTGTGTGGAGGGAAGATTGTGTACGCGCA
CGAGgtaagggggagcgggagggagggagggagggagagagagggaaatt
caaacagccagatgggcgcaccttcccaacggggtgatcaatcctaagga
atacattttcaggcatctcttcatcaagtcgcctccttgtccctttatcc
cgacccacccctccattctagGGAGGATACTCGGACCTTTACGTTCCTTT
CTGCGGGCACGCCGTCATCGAGGAAATGAGTGGGGTGAAGACGGAGGTAA
AAGATTGCATGCTGACGGACATTAATCATTGGGGGTATCACGAGCTTCAA
CAGCATCAGGTAGGTAAGGAGGGAGAGAGCACCGGATTGGAGAAGGAGAG
AGAGCAAGAACGAGAGGAAAGGTTCACTCACCATGGCACTCTACCACAGG
ACGCCGTCATCAAAAAGTGTGAGGTGCTGGTGGATGACCTACAAAAGCGG
ATGGCAGCGACGAAATAAGTATGGGTTACGAAGAGGAGAGACCCCTGCAT
GAAGCAGAGTTGCTGGGGTATGTGGGAGTGAGTGGGGGAGGTCGGATAAT
GGATATTAAGGCTCAAGGCCTTGGAGGAGCGAGGAATTTTGAAGGATGCC
GATTATTTACAATAGGTGGACACATAGTATAAGATGATAGGTGTAGAGAA
CGTCAAAATGACGAACGATTGTTCGGGGTTGAAATGGTTTAATGAACGAC
TTTCTTGATGAGGAAACGGACTCGAGAGAAGCGCTTCAAGCGTTCCTTCT
TGTTAAGCGTACCAAAGCGCATCATCTGCGAG
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protein sequence of NO05G04890.1

>NO05G04890.1-protein ID=NO05G04890.1-protein|Name=NO05G04890.1|organism=Nannochloropsis oceanica|type=polypeptide|length=397bp
MAANGGEVHTASALTTKKSTTGYVWHERYMWHHGGKYAWNEWIQPTRHFE
SPESKRRLHNLLDASGLLEKLVRIPPRLATVEEITRFHTAEYVAKIQRLS
AEYGGEAGDFATFGKGSYDIARLAVGGVLEAVDAVIEGRREGGEEGEVIT
NAYCLVRPPGHHAERDRGMGFCLFNNVALGALHAVAKHGLKRVAIVDYDV
HHGNGTQQAFYKDPSVLFISIHQDSNYPAGTGYVEERGQEGGEGFTINIP
LPPGSGSEAYYQAFDRVVLPAVRAFAPELLLVSSGYDAGFLDPLATMMLS
SEHFRVLGQKMNGVAAEVCGGKIVYAHEGGYSDLYVPFCGHAVIEEMSGV
KTEVKDCMLTDINHWGYHELQQHQDAVIKKCEVLVDDLQKRMAATK*
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protein sequence of NO05G04890.2

>NO05G04890.2-protein ID=NO05G04890.2-protein|Name=NO05G04890.2|organism=Nannochloropsis oceanica|type=polypeptide|length=427bp
MAANGGEVHTASALTTKKSTTGYVWHERYMWHHGGKYAWNEWIQPTRHFE
SPESKRRLHNLLDASGLLEKLVRIPPRLATVEEITRFHTAEYVAKIQRLS
AEYGGEAGDFATFGKGSYDIARLAVGGVLEAVDAVIEGRREGGEEGEVIT
NAYCLVRPPGHHAERDRGMGFCLFNNVALGALHAVAKHGLKRVAIVDYDV
HHGNGTQQAFYKDPSVLFISIHQDSNYPAGTGYVEERGQEGGEGFTINIP
LPPGSGSEAYYQAFDRVVLPAVRAFAPELLLVSSGYDAGFLDPLATMMLS
SEHFRVLGQKMNGVAAEVCGGKIVYAHEGGYSDLYVPFCGHAVIEEMSGV
KTEVKDCMLTDINHWGYHELQQHQVGKEGESTGLEKEREQEREERFTHHG
TLPQDAVIKKCEVLVDDLQKRMAATK*
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Synonyms
Publications