NO05G04890.2, NO05G04890.2 (mRNA) Nannochloropsis oceanica

Overview
NameNO05G04890.2
Unique NameNO05G04890.2
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4273
Alignment locationchr5:1265984..1271015 +

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:1265984..1271015 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO05G04890.2 vs.
Match: EWM27914.1 (histone deacetylase superfamily protein [Nannochloropsis gaditana])

HSP 1 Score: 625.9 bits (1613), Expect = 9.000e-176
Identity = 309/427 (72.37%), Postives = 343/427 (80.33%), Query Frame = 0
Query:    1 MAANGGE-VHTASALTTKKSTTGYVWHERYMWHHGGKYAWNEWIQPTRHFESPESKRRLHNLLDASGLLEKLVRIPPRLATVEEITRFHTAEYVAKIQRLSAEYGGEAGDFATFGKGSYDIARLAVGGVLEAVDAVIEGRREGGEEGEVITNAYCLVRPPGHHAERDRGMGFCLFNNVALGALHAVAKHGLKRVAIVDYDVHHGNGTQQAFYKDPSVLFISIHQDSNYPAGTGYVEERGQEGGEGFTINIPLPPGSGSEAYYQAFDRVVLPAVRAFAPELLLVSSGYDAGFLDPLATMMLSSEHFRVLGQKMNGVAAEVCGGKIVYAHEGGYSDLYVPFCGHAVIEEMSGVKTEVKDCMLTDINHWGYHELQQHQVGKEGESTGLEKEREQEREERFTHHGTLPQDAVIKKCEVLVDDLQKRMAATK 427
            MAAN G     +SALT  KSTTGYVWHERYMWHH GKY WNEWIQPTRHFESPESKRRLHNLLDASGLL+ LVR+PPRLA+VEE+TRFHT EYV KIQ LS   GGEAGDFATFG GSY+IA LAVGGVL A+DAV+ GR + G++   + NAYCL RPPGHHAE+DRGMGFCLFNNVALGA+HA  K GLKRVAIVDYDVHHGNGTQQAFY+D +VLFISIHQDSNYPA TGYVEE G   GEG TINIPLPPGSGS AY++AFDRV+LPAVRAFAPELLLVSSGYDAG+LDPLATMMLSSEHFR LGQK+NG+A +VC G+IVY HEGGYSDLYVPFCGHA++EE++  +T V+DCMLTD++ WGY ELQ H                              QDAVIKKCE LV  L++RMA  K
Sbjct:    1 MAANAGAGTKLSSALT--KSTTGYVWHERYMWHHAGKYTWNEWIQPTRHFESPESKRRLHNLLDASGLLDCLVRVPPRLASVEELTRFHTLEYVGKIQSLSRAQGGEAGDFATFGPGSYEIACLAVGGVLNAIDAVVTGRTDTGDK---VRNAYCLARPPGHHAEKDRGMGFCLFNNVALGAMHARVKQGLKRVAIVDYDVHHGNGTQQAFYEDEAVLFISIHQDSNYPAHTGYVEENGTGKGEGTTINIPLPPGSGSGAYFEAFDRVILPAVRAFAPELLLVSSGYDAGYLDPLATMMLSSEHFRTLGQKLNGLAEDVCDGRIVYVHEGGYSDLYVPFCGHAIVEELTKRRTGVRDCMLTDVHQWGYQELQPH------------------------------QDAVIKKCEALVTALKRRMAGMK 392          
The following BLAST results are available for this feature:
BLAST of NO05G04890.2 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM27914.19.000e-17672.37histone deacetylase superfamily protein [Nannochlo... [more]
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G04890NO05G04890Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO05G04890.2NO05G04890.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO05G04890.2.cds1NO05G04890.2.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO05G04890.2.cds2NO05G04890.2.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO05G04890.2.cds3NO05G04890.2.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO05G04890.2.cds4NO05G04890.2.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO05G04890.2.cds5NO05G04890.2.cds5Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO05G04890.2.cds6NO05G04890.2.cds6Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO05G04890.2 ID=NO05G04890.2|Name=NO05G04890.2|organism=Nannochloropsis oceanica|type=mRNA|length=4273bp
TTCTCCTCTCTATTTCGATTGATTCTTTACAAACGGTAATCTCATTCCTC
AGGGTGGCGTCCGTCGAGGCCTCGCCGCGTTTGCACACACTCAAGTCCTA
CTCTACATGTAATCCTTTCCCGTTTTTGTCATCCATTAACAACCAACAAC
TAAGTCTCATTGTCTCAACTTCAACCTCCTTTCACTTTTCACCCACACAC
ACGTCCTCAGCCACCTCCCTTTCCTCCGCTTCATCGCTATCCACCTGCTT
CTTGACCGCGCCTGCTGCAGTAGCAACAGCAGCGGTAGCAGCGGTAGCAG
CGGTAACAGAATCATCGCTTCCTCTCCCATGCAGGATAAGGAATTCATCG
TGCACCTCTTGCAGTTTTTGTACCTCCGTCTCGTACGCACGCATGGCCGA
TTCAATCGCAGTCGAGGAGGAGGAGGAGCAGGATGAAGAAGAGGAAGGGT
TGAATGAAGAGGGGGCAACAGATGATGAAGCGAAATGAGGTGGATATCGA
AGTGGTGACGGGGGCAGGTGGCAGGCCACAGGCAATGACAGGAATGTAGG
CGGCGGCATCGGCATGAGCGGGGCACACGTGAGTGGCGGCATCGCCACCG
GCCGTGATAGTGATGGTTGTGTGAACTCGGGCTTTGGAAAAGACAGTGAC
AACGGTATGTGAGGATTTCCTGTTATTTGTTCCTGCTCCGCCTCCATGCC
TGGTTTCCTCTCTGCCCTCCCTCCCAAGCAATGCAAAGCCTTCGTTGACG
ACGCTAACAAATCCCGCAACGTCCTCACTTCCTCCCTTAATCCCTCCAAC
TCTGCCTCATCCTCCCTCGCATGCTGCCGCGTTTTCTCATTCTCATTCTC
TAGATTTGCGCATGTCCGCTCAAGATTTCTAACCATGGCCGTTGCCTCCT
GCTCTCGTGCCCAGGCCTCCTCCTCCTGCCTCTGCAACCGCTCTCTCGCT
ACAACCCACCGCTCCTTCTCCTTCCTCAACATCTCCACCTCTTCCACGCA
ACCCCTCGCTTCCTCCACTTGCCTTCGTAATGCTTGCATATCTGCTCTCT
GCTCCTGATACACCAATCTTTCGGCTTGTGCTTTTCGAAGCTCTTCCTGG
ACAAGGTGCTGTTGGACCTGCAGGCTCTGTTGCTGCGATGCGTATGCCTT
CGCGCCATCTTGGTGAGCAGCTGCTGTCTCCCCCGCACGTTGTCGAGCCC
ATGCAGCGATTTGCTCTCTGAACGTGAATTGTTCTTTGTCTAGGATTGCC
TGTCGTTCTGCGGCTCGTGCCTCTGCTCGTTCCACCTCTTCCTTGCGTCG
TCGCATGGCCTCCATATCACGTAACACCGCCTGTCGCGCCTCGAATTGAG
CTGCCTCCGCTGCTTGTAACCGGACACGAACACGACGTTCCTCCTCTTTA
GCTTGTGCCCATGCCTGCTCCACTTTCCGGTCTTGCGTCGCTTGCATTTC
CTCGCGGACAATTAATAGCTCCCGTCGGTGCTTCGCGGCCTCTTCCAACC
TGAGGTGTGTCAGCTCCGTCTCCCGAAAATGAGATATCTCCGCAGCTATT
TCCTTCTGGGCGCGAGCTTCGCATTCTTGTTGGAATCGACTCAGATGTTT
CTCGTGCTGGTGCTGGTGGAGGGGGGAAGGGGGTTGTGTAAGGGAAGGGG
TGGTAGTCGTCGTCGAAACTGCCTCAGTTTGGGTTTGAGTGTGGGAGGAA
GAGGAAGAGGAGACGACGGCTGGCTCGGCTCTTTGAAAAGGTAGCACCAA
TGCGTGAAGGAGACTTTTGTGTTCTGATTCACCTTTGCTCTGCGCCAGCA
TCAACGTCTCAGCCAGGTCGTGTCGTGACAGGAGGTGTTGCTGGACCAGC
ATGTGACTCTCAGGCAAGAACACCGCCAATGTCTGGCGAAATTTTTGGTG
CCGCAGGAAATCGACGACAAGGCTATTGAGAACCATGTTTTCCAAAGACA
TGCCGGGGCATGGATGCACTTTTTGGTCTTCATGGATATTGGCTCGTGCC
AGTGGTCTCAACAGGTGACCGCGGAGCTGCCCTAAAATATCGTCGATGGC
GCCAGATTCCCGCAGCTTTTTCCGCACCAACATTTTGAGTTCAGAAAGGG
TAAGGTGGTTGCTATCATGATCTTCATCTTCGTTTTCTTCTTTCTTGGGA
TCTAGCGGTAAGCCAGCAGGAGAAAGAGGAGGCGTAGGAGTAGGAGTGGA
GGTAGGCCCCATGGGCCTGATCGATTGCGTTTTTGTGGAAGGAAAAAATA
AGGACGACATTTCGATGAAAGACAAGTTGGTGAAGCCAAAAGCAGGGAAG
TAGAGTTGTTGAAATGAATGAGCATATGGTGATAGTGCCCATTATTTGTG
ATGTTTTTGCAGGAGTAGGGGGCAAAAAAGTGCTACAATGGTCAAATAGT
GGGGGCATGGTGAGTGCGCGAGGTCTCGTTTTGATGCTCCTCTGAGTCGC
TCCTTGCTTTAAGTCCGCGTGCCTTCCTTCGTCCTCTCTCACTCCCTACG
TACACTATGCCACAGCCTTGAGCCTCGTCCCTTGCCTGCGCCCGTGCGTT
CAGATCTCCTGTAGGGTTGCCGCTTTCTCTCGTCTCTCCACCATTCGCTC
GATTGGTGGTACTTGAGCAACATACATACGTCGTCATCGCATCGTCATAT
CAGCTGATACAGCAGACGCAGAGGCAGCATGGCCGCCAACGGAGGAGAGG
TGCACACCGCGTCCGCCTTGACGACCAAGAAGAGCACGACAGGCTACGTC
TGGCATGAGCGCTACATGTGGCACCATGGCGGGAAGTACGCGTGGAATGA
GTGGATCCAGCCCACCCGGCACTTTGAGTCTCCCGAGTCCAAGCGCCGTC
TGCACAACCTCCTGGATGCCAGCGGCCTCCTCGAAAAGCTCGTTCGCATC
CCTCCCCGTCTTGCCACCGTGGAAGAGATTACTCGCTTCCACACTGCCGA
ATACGTGGCTAAGATCCAAAGATTAAGTGCGGAATATGGGGGCGAAGCAG
GGGATTTTGCAACGTTTGGAAAAGGGTCGTATGACATTGCGCGACTGGCC
GTGGGAGGGGTGTTGGAGGCGGTGGATGCGGTGATCGAGGGAAGGAGAGA
AGGAGGGGAGGAGGGAGAGGTGATCACGAATGCGTACTGCCTCGTTAGAC
CGCCGGGACACCACGCGGAGAGGGATCGGGGGATGGGCTTCTGTTTATTT
AATAACGTGGCGTTGGGCGCATTGCACGCCGTGGCCAAGCACGGGTTGAA
ACGGGTGGCGATTGTGGATTATGACGTTCACCATGGCAACGGCACACAGC
AAGCTTTCTACAAGGACCCGTCCGTCCTCTTCATTTCCATCCATCAAGAC
AGCAACTATCCCGCTGGGACCGGCTACGTCGAGGAACGGGGGCAGGAAGG
GGGGGAGGGCTTCACGATCAACATTCCTCTTCCTCCAGGGAGTGGGAGCG
AGGCCTACTATCAGGCATTTGATCGCGTGGTGCTTCCGGCGGTTCGGGCC
TTCGCCCCTGAGCTGCTCTTGGTCTCCTCCGGGTACGACGCCGGCTTTCT
CGACCCCCTCGCCACAATGATGCTTTCGTCGGAGCATTTTCGAGTGCTGG
GGCAGAAAATGAACGGGGTGGCAGCGGAAGTGTGTGGAGGGAAGATTGTG
TACGCGCACGAGGGAGGATACTCGGACCTTTACGTTCCTTTCTGCGGGCA
CGCCGTCATCGAGGAAATGAGTGGGGTGAAGACGGAGGTAAAAGATTGCA
TGCTGACGGACATTAATCATTGGGGGTATCACGAGCTTCAACAGCATCAG
GTAGGTAAGGAGGGAGAGAGCACCGGATTGGAGAAGGAGAGAGAGCAAGA
ACGAGAGGAAAGGTTCACTCACCATGGCACTCTACCACAGGACGCCGTCA
TCAAAAAGTGTGAGGTGCTGGTGGATGACCTACAAAAGCGGATGGCAGCG
ACGAAATAAGTATGGGTTACGAAGAGGAGAGACCCCTGCATGAAGCAGAG
TTGCTGGGGTATGTGGGAGTGAGTGGGGGAGGTCGGATAATGGATATTAA
GGCTCAAGGCCTTGGAGGAGCGAGGAATTTTGAAGGATGCCGATTATTTA
CAATAGGTGGACACATAGTATAAGATGATAGGTGTAGAGAACGTCAAAAT
GACGAACGATTGTTCGGGGTTGAAATGGTTTAATGAACGACTTTCTTGAT
GAGGAAACGGACTCGAGAGAAGCGCTTCAAGCGTTCCTTCTTGTTAAGCG
TACCAAAGCGCATCATCTGCGAG
back to top

protein sequence of NO05G04890.2

>NO05G04890.2-protein ID=NO05G04890.2-protein|Name=NO05G04890.2|organism=Nannochloropsis oceanica|type=polypeptide|length=427bp
MAANGGEVHTASALTTKKSTTGYVWHERYMWHHGGKYAWNEWIQPTRHFE
SPESKRRLHNLLDASGLLEKLVRIPPRLATVEEITRFHTAEYVAKIQRLS
AEYGGEAGDFATFGKGSYDIARLAVGGVLEAVDAVIEGRREGGEEGEVIT
NAYCLVRPPGHHAERDRGMGFCLFNNVALGALHAVAKHGLKRVAIVDYDV
HHGNGTQQAFYKDPSVLFISIHQDSNYPAGTGYVEERGQEGGEGFTINIP
LPPGSGSEAYYQAFDRVVLPAVRAFAPELLLVSSGYDAGFLDPLATMMLS
SEHFRVLGQKMNGVAAEVCGGKIVYAHEGGYSDLYVPFCGHAVIEEMSGV
KTEVKDCMLTDINHWGYHELQQHQVGKEGESTGLEKEREQEREERFTHHG
TLPQDAVIKKCEVLVDDLQKRMAATK*
back to top

mRNA from alignment at chr5:1265984..1271015+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO05G04890.2 ID=NO05G04890.2|Name=NO05G04890.2|organism=Nannochloropsis oceanica|type=mRNA|length=5032bp|location=Sequence derived from alignment at chr5:1265984..1271015+ (Nannochloropsis oceanica)
TTCTCCTCTCTATTTCGATTGATTCTTTACAAACGGTAATCTCATTCCTC AGGGTGGCGTCCGTCGAGGCCTCGCCGCGTTTGCACACACTCAAGTCCTA CTCTACATGTAATCCTTTCCCGTTTTTGTCATCCATTAACAACCAACAAC TAAGTCTCATTGTCTCAACTTCAACCTCCTTTCACTTTTCACCCACACAC ACGTCCTCAGCCACCTCCCTTTCCTCCGCTTCATCGCTATCCACCTGCTT CTTGACCGCGCCTGCTGCAGTAGCAACAGCAGCGGTAGCAGCGGTAGCAG CGGTAACAGAATCATCGCTTCCTCTCCCATGCAGGATAAGGAATTCATCG TGCACCTCTTGCAGTTTTTGTACCTCCGTCTCGTACGCACGCATGGCCGA TTCAATCGCAGTCGAGGAGGAGGAGGAGCAGGATGAAGAAGAGGAAGGGT TGAATGAAGAGGGGGCAACAGATGATGAAGCGAAATGAGGTGGATATCGA AGTGGTGACGGGGGCAGGTGGCAGGCCACAGGCAATGACAGGAATGTAGG CGGCGGCATCGGCATGAGCGGGGCACACGTGAGTGGCGGCATCGCCACCG GCCGTGATAGTGATGGTTGTGTGAACTCGGGCTTTGGAAAAGACAGTGAC AACGGTATGTGAGGATTTCCTGTTATTTGTTCCTGCTCCGCCTCCATGCC TGGTTTCCTCTCTGCCCTCCCTCCCAAGCAATGCAAAGCCTTCGTTGACG ACGCTAACAAATCCCGCAACGTCCTCACTTCCTCCCTTAATCCCTCCAAC TCTGCCTCATCCTCCCTCGCATGCTGCCGCGTTTTCTCATTCTCATTCTC TAGATTTGCGCATGTCCGCTCAAGATTTCTAACCATGGCCGTTGCCTCCT GCTCTCGTGCCCAGGCCTCCTCCTCCTGCCTCTGCAACCGCTCTCTCGCT ACAACCCACCGCTCCTTCTCCTTCCTCAACATCTCCACCTCTTCCACGCA ACCCCTCGCTTCCTCCACTTGCCTTCGTAATGCTTGCATATCTGCTCTCT GCTCCTGATACACCAATCTTTCGGCTTGTGCTTTTCGAAGCTCTTCCTGG ACAAGGTGCTGTTGGACCTGCAGGCTCTGTTGCTGCGATGCGTATGCCTT CGCGCCATCTTGGTGAGCAGCTGCTGTCTCCCCCGCACGTTGTCGAGCCC ATGCAGCGATTTGCTCTCTGAACGTGAATTGTTCTTTGTCTAGGATTGCC TGTCGTTCTGCGGCTCGTGCCTCTGCTCGTTCCACCTCTTCCTTGCGTCG TCGCATGGCCTCCATATCACGTAACACCGCCTGTCGCGCCTCGAATTGAG CTGCCTCCGCTGCTTGTAACCGGACACGAACACGACGTTCCTCCTCTTTA GCTTGTGCCCATGCCTGCTCCACTTTCCGGTCTTGCGTCGCTTGCATTTC CTCGCGGACAATTAATAGCTCCCGTCGGTGCTTCGCGGCCTCTTCCAACC TGAGGTGTGTCAGCTCCGTCTCCCGAAAATGAGATATCTCCGCAGCTATT TCCTTCTGGGCGCGAGCTTCGCATTCTTGTTGGAATCGACTCAGATGTTT CTCGTGCTGGTGCTGGTGGAGGGGGGAAGGGGGTTGTGTAAGGGAAGGGG TGGTAGTCGTCGTCGAAACTGCCTCAGTTTGGGTTTGAGTGTGGGAGGAA GAGGAAGAGGAGACGACGGCTGGCTCGGCTCTTTGAAAAGGTAGCACCAA TGCGTGAAGGAGACTTTTGTGTTCTGATTCACCTTTGCTCTGCGCCAGCA TCAACGTCTCAGCCAGGTCGTGTCGTGACAGGAGGTGTTGCTGGACCAGC ATGTGACTCTCAGGCAAGAACACCGCCAATGTCTGGCGAAATTTTTGGTG CCGCAGGAAATCGACGACAAGGCTATTGAGAACCATGTTTTCCAAAGACA TGCCGGGGCATGGATGCACTTTTTGGTCTTCATGGATATTGGCTCGTGCC AGTGGTCTCAACAGGTGACCGCGGAGCTGCCCTAAAATATCGTCGATGGC GCCAGATTCCCGCAGCTTTTTCCGCACCAACATTTTGAGTTCAGAAAGGG TAAGGTGGTTGCTATCATGATCTTCATCTTCGTTTTCTTCTTTCTTGGGA TCTAGCGGTAAGCCAGCAGGAGAAAGAGGAGGCGTAGGAGTAGGAGTGGA GGTAGGCCCCATGGGCCTGATCGATTGCGTTTTTGTGGAAGGAAAAAATA AGGACGACATTTCGATGAAAGACAAGTTGGTGAAGCCAAAAGCAGGGAAG TAGAGTTGTTGAAATGAATGAGCATATGGTGATAGTGCCCATTATTTGTG ATGTTTTTGCAGGAGTAGGGGGCAAAAAAGTGCTACAATGGTCAAATAGT GGGGGCATGGTGAGTGCGCGAGGTCTCGTTTTGATGCTCCTCTGAGTCGC TCCTTGCTTTAAGTCCGCGTGCCTTCCTTCGTCCTCTCTCACTCCCTACG TACACTATGCCACAGCCTTGAGCCTCGTCCCTTGCCTGCGCCCGTGCGTT CAGATCTCCTGTAGGGTTGCCGCTTTCTCTCGTCTCTCCACCATTCGCTC GATTGGTGGTACTTGAGCAACATACATACGTCGTCATCGCATCGTCATAT CAGCTGATACAGCAGACGCAGAGGCAGCATGGCCGCCAACGGAGGAGAGG TGCACACCGCGTCCGCCTTGACGACCAAGAAGAGCACGACAGGCTACGTC TGGCATGAGCGCTACATGTGGCACCATGGCGGGAAGTACGCGTGGAAGTA AGTCACATCGTCCATTCCTTACGTACACCCTCCACCTTGCTTCATCTCGC CGCCTCAGTCACTCCACACTCACGCACATACGACTCTTCCTCACCATAAA TTGTACATCGCAGTGAGTGGATCCAGCCCACCCGGCACTTTGAGTCTCCC GAGTCCAAGCGCCGTCTGCACAACCTCCTGGATGCCAGCGGCCTCCTCGA AAAGTAAGTGTTTCCAGCTTCCCACTCCTCTTCCTCCTGCTTTATTCCGT ACAATTTAATGTTCCAGTGGTCTTTACCATCTCCTTATTTTTCTCACAGA TAACTCACGTCGCAATCTAAAGTGCTCCTCTCTCCCTCCTTACCATCCAC TCTCAGGCTCGTTCGCATCCCTCCCCGTCTTGCCACCGTGGAAGAGATTA CTCGCTTCCACACTGCCGAATACGTGGCTAAGATCCAAAGATTAAGTGCG GAATATGGGGGCGAAGCAGGGGATTTTGCAACGTTTGGAAAAGGGTCGTA TGACATTGCGCGACTGGCCGTGGGAGGGGTGTTGGAGGCGGTGGATGCGG TGATCGAGGGAAGGAGAGAAGGAGGGGAGGAGGGAGAGGTGATCACGAAT GCGTACTGCCTCGTTAGACCGCCGGGACACCACGCGGAGAGGGATCGGGG GATGGGCTTCTGTTTATTTAATAACGTGGCGTTGGGCGCATTGCACGCCG TGGCCAAGCACGGGTTGAAACGGGTGGCGATTGTGGATTATGACGTTCAC CATGGCAACGGCACACAGGCATGTACTCCTCCCTCCGTCTACCTGCAATC CCACCCCCTTCTTTTTTATGTCGCTATTCTTCCCCATAGTACCCCCTCCA CTCATGTGGCCTGTTTCACCTCTTTTCGACGCGAATCTGACTTACCTTCC TTCCCCCTTCTCCCCCCTCCTCCCCTCTCTCCTTCCCTCCCTCTTTGGCA GCAAGCTTTCTACAAGGACCCGTCCGTCCTCTTCATTTCCATCCATCAAG ACAGCAACTATCCCGCTGGGACCGGCTACGTCGAGGAACGGGGGCAGGAA GGGGGGGAGGGCTTCACGATCAACATTCCTCTTCCTCCAGGGAGTGGGAG CGAGGCCTACTATCAGGCATTTGATCGCGTGGTGCTTCCGGCGGTTCGGG TGAGTGGCTCGGGAGGAAAGGAGAGAATAAGGGAGGGAAGGGGAAGGATA CTCGTGCATTCTGATAGTCGATATTATACACATTGGTTTTTGATGCCTCT CCCTCCCTCCCTCTCTTCCTTCCTCCCTCCCTCCCTCAGGCCTTCGCCCC TGAGCTGCTCTTGGTCTCCTCCGGGTACGACGCCGGCTTTCTCGACCCCC TCGCCACAATGATGCTTTCGTCGGAGCATTTTCGAGTGCTGGGGCAGAAA ATGAACGGGGTGGCAGCGGAAGTGTGTGGAGGGAAGATTGTGTACGCGCA CGAGGTAAGGGGGAGCGGGAGGGAGGGAGGGAGGGAGAGAGAGGGAAATT CAAACAGCCAGATGGGCGCACCTTCCCAACGGGGTGATCAATCCTAAGGA ATACATTTTCAGGCATCTCTTCATCAAGTCGCCTCCTTGTCCCTTTATCC CGACCCACCCCTCCATTCTAGGGAGGATACTCGGACCTTTACGTTCCTTT CTGCGGGCACGCCGTCATCGAGGAAATGAGTGGGGTGAAGACGGAGGTAA AAGATTGCATGCTGACGGACATTAATCATTGGGGGTATCACGAGCTTCAA CAGCATCAGGTAGGTAAGGAGGGAGAGAGCACCGGATTGGAGAAGGAGAG AGAGCAAGAACGAGAGGAAAGGTTCACTCACCATGGCACTCTACCACAGG ACGCCGTCATCAAAAAGTGTGAGGTGCTGGTGGATGACCTACAAAAGCGG ATGGCAGCGACGAAATAAGTATGGGTTACGAAGAGGAGAGACCCCTGCAT GAAGCAGAGTTGCTGGGGTATGTGGGAGTGAGTGGGGGAGGTCGGATAAT GGATATTAAGGCTCAAGGCCTTGGAGGAGCGAGGAATTTTGAAGGATGCC GATTATTTACAATAGGTGGACACATAGTATAAGATGATAGGTGTAGAGAA CGTCAAAATGACGAACGATTGTTCGGGGTTGAAATGGTTTAATGAACGAC TTTCTTGATGAGGAAACGGACTCGAGAGAAGCGCTTCAAGCGTTCCTTCT TGTTAAGCGTACCAAAGCGCATCATCTGCGAG
back to top

Coding sequence (CDS) from alignment at chr5:1265984..1271015+

>NO05G04890.2 ID=NO05G04890.2|Name=NO05G04890.2|organism=Nannochloropsis oceanica|type=CDS|length=1281bp|location=Sequence derived from alignment at chr5:1265984..1271015+ (Nannochloropsis oceanica)
ATGGCCGCCAACGGAGGAGAGGTGCACACCGCGTCCGCCTTGACGACCAA
GAAGAGCACGACAGGCTACGTCTGGCATGAGCGCTACATGTGGCACCATG
GCGGGAAGTACGCGTGGAATGAGTGGATCCAGCCCACCCGGCACTTTGAG
TCTCCCGAGTCCAAGCGCCGTCTGCACAACCTCCTGGATGCCAGCGGCCT
CCTCGAAAAGCTCGTTCGCATCCCTCCCCGTCTTGCCACCGTGGAAGAGA
TTACTCGCTTCCACACTGCCGAATACGTGGCTAAGATCCAAAGATTAAGT
GCGGAATATGGGGGCGAAGCAGGGGATTTTGCAACGTTTGGAAAAGGGTC
GTATGACATTGCGCGACTGGCCGTGGGAGGGGTGTTGGAGGCGGTGGATG
CGGTGATCGAGGGAAGGAGAGAAGGAGGGGAGGAGGGAGAGGTGATCACG
AATGCGTACTGCCTCGTTAGACCGCCGGGACACCACGCGGAGAGGGATCG
GGGGATGGGCTTCTGTTTATTTAATAACGTGGCGTTGGGCGCATTGCACG
CCGTGGCCAAGCACGGGTTGAAACGGGTGGCGATTGTGGATTATGACGTT
CACCATGGCAACGGCACACAGCAAGCTTTCTACAAGGACCCGTCCGTCCT
CTTCATTTCCATCCATCAAGACAGCAACTATCCCGCTGGGACCGGCTACG
TCGAGGAACGGGGGCAGGAAGGGGGGGAGGGCTTCACGATCAACATTCCT
CTTCCTCCAGGGAGTGGGAGCGAGGCCTACTATCAGGCATTTGATCGCGT
GGTGCTTCCGGCGGTTCGGGCCTTCGCCCCTGAGCTGCTCTTGGTCTCCT
CCGGGTACGACGCCGGCTTTCTCGACCCCCTCGCCACAATGATGCTTTCG
TCGGAGCATTTTCGAGTGCTGGGGCAGAAAATGAACGGGGTGGCAGCGGA
AGTGTGTGGAGGGAAGATTGTGTACGCGCACGAGGGAGGATACTCGGACC
TTTACGTTCCTTTCTGCGGGCACGCCGTCATCGAGGAAATGAGTGGGGTG
AAGACGGAGGTAAAAGATTGCATGCTGACGGACATTAATCATTGGGGGTA
TCACGAGCTTCAACAGCATCAGGTAGGTAAGGAGGGAGAGAGCACCGGAT
TGGAGAAGGAGAGAGAGCAAGAACGAGAGGAAAGGTTCACTCACCATGGC
ACTCTACCACAGGACGCCGTCATCAAAAAGTGTGAGGTGCTGGTGGATGA
CCTACAAAAGCGGATGGCAGCGACGAAATAA
back to top
Synonyms
Publications