NO05G04760, NO05G04760 (gene) Nannochloropsis oceanica

Overview
NameNO05G04760
Unique NameNO05G04760
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2678
Alignment locationchr5:1236992..1239669 +

Link to JBrowse

Properties
Property NameValue
DescriptionAtp-binding cassette
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:1236992..1239669 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0016887ATPase activity
GO:0005524ATP binding
GO:0016787hydrolase activity
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR013525ABC_2_trans
IPR003439ABC_transporter-like
IPR003593AAA+_ATPase
Homology
BLAST of NO05G04760 vs. NCBI_GenBank
Match: XP_005854935.1 (atp-binding cassette [Nannochloropsis gaditana CCMP526] >EKU21423.1 atp-binding cassette [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 810.1 bits (2091), Expect = 4.300e-231
Identity = 405/553 (73.24%), Postives = 457/553 (82.64%), Query Frame = 0
Query:    1 MTTRPTVVDEAASLSRPLSSSAAPIKHSLEWHVKSFRVRPRRTRRSSSSSDKATAAPTTKTILRDVAGRTVSGELTAILGPSGAGKTTLLECISLRNRNFDGCVQYDRQAPQGRFFTLSAFVHQEEMLYGFLTPREHLTFHAVARMSGGGGGWCIGGGPNHDGKVXXXXXXNGSHLRQTSRKVMGQRVEQVIKEVKLEKCADTLIGGSDPVFAAKGISGGERKRLTIATELLLTPEAIFLDEPNTGLDSVMSESIFQTLKDLTNEARIVVATVHCPSSKTFHLFSNLILLTCDGRLAYSGPAAEALAYFQATLAMECRQHYNPADFVLELVSPEPGVPLEEEIRRMDVLSHAYAHSGMHVTNPLAPDDKHKSLHDVRGQGASNWTLFKLNVWRGMLEFKRDRVTLILWAAVSVLLGSLFGILYWQLAASNWRNLMGLIFSAVVGNVFTGCLGVVMRFPLEWTLVCREYYSGANAMGPYIVARFLTTLPLSYGPFLMASIIYWATGMDPDAGKYVVFVLIFVTYNWTCFSLGQWVSSFSANPLVAMSIMPAFTT 554
            MTT    +D +     P ++ A  I+H LEWHV+SF+V+ RR+ R+      +T   TTKTIL+ VAG  VSGELTAILGPSGAGKTTLLECISLRNRNFDGCVQYD QAP+GRFFTLSAFVHQ +MLYGFLTPREHLTFHA+ARMSGG      G     +               + S + M +RVE+VI  VKLEKCADTLIGGSDPVF  KGISGGERKRLTIATELL T E IFLDEP++GLDSVMSESIFQTLKDLT + RIV+ATVHCPSSKT+HLFSNLILLTCDGRLAYSGPAA+AL+YFQA L +EC QHYNPADFVLELVS EPGVPL+EE+RRMD LS AYA S M + NPL  DDKHK+LHDVRGQGAS+W  FKLN+WRG L+  RDR+TLILWAAVS L+G+LFG+LYWQLAASNWRNLMGLIFSAVVGNVFTGCLGVVMRFP+EWTLV RE+ SGANA+GPY++ARF TTLPLSYGP LM+SIIYW TGMDPDAG Y++FVLIFV++NW+CFSLGQW+SSFSANPLVAM+IMP F T
Sbjct:    1 MTTHEDYMDASVVDQTPTNNFAVKIQHKLEWHVESFKVQIRRS-RAPGKGTASTTTQTTKTILQKVAGCAVSGELTAILGPSGAGKTTLLECISLRNRNFDGCVQYDGQAPEGRFFTLSAFVHQADMLYGFLTPREHLTFHAIARMSGGSRTAARG---LPEPGASQTSRGQSWQAEKMSSESMARRVEEVIATVKLEKCADTLIGGSDPVFNVKGISGGERKRLTIATELLQTNEIIFLDEPSSGLDSVMSESIFQTLKDLTTQGRIVIATVHCPSSKTYHLFSNLILLTCDGRLAYSGPAAQALSYFQAALGIECPQHYNPADFVLELVSAEPGVPLQEELRRMDALSLAYAQSFMKIQNPLPADDKHKALHDVRGQGASDWVFFKLNLWRGGLQLARDRITLILWAAVSALIGALFGVLYWQLAASNWRNLMGLIFSAVVGNVFTGCLGVVMRFPMEWTLVVREFSSGANAVGPYMIARFFTTLPLSYGPVLMSSIIYWCTGMDPDAGTYLIFVLIFVSFNWSCFSLGQWISSFSANPLVAMTIMPGFVT 549          
BLAST of NO05G04760 vs. NCBI_GenBank
Match: EWM27919.1 (abc subfamily abcg [Nannochloropsis gaditana])

HSP 1 Score: 806.6 bits (2082), Expect = 4.800e-230
Identity = 404/553 (73.06%), Postives = 455/553 (82.28%), Query Frame = 0
Query:    1 MTTRPTVVDEAASLSRPLSSSAAPIKHSLEWHVKSFRVRPRRTRRSSSSSDKATAAPTTKTILRDVAGRTVSGELTAILGPSGAGKTTLLECISLRNRNFDGCVQYDRQAPQGRFFTLSAFVHQEEMLYGFLTPREHLTFHAVARMSGGGGGWCIGGGPNHDGKVXXXXXXNGSHLRQTSRKVMGQRVEQVIKEVKLEKCADTLIGGSDPVFAAKGISGGERKRLTIATELLLTPEAIFLDEPNTGLDSVMSESIFQTLKDLTNEARIVVATVHCPSSKTFHLFSNLILLTCDGRLAYSGPAAEALAYFQATLAMECRQHYNPADFVLELVSPEPGVPLEEEIRRMDVLSHAYAHSGMHVTNPLAPDDKHKSLHDVRGQGASNWTLFKLNVWRGMLEFKRDRVTLILWAAVSVLLGSLFGILYWQLAASNWRNLMGLIFSAVVGNVFTGCLGVVMRFPLEWTLVCREYYSGANAMGPYIVARFLTTLPLSYGPFLMASIIYWATGMDPDAGKYVVFVLIFVTYNWTCFSLGQWVSSFSANPLVAMSIMPAFTT 554
            M T     D +     P ++ A  I+H LEWHV+SF+V+ RR+ R+      +T   TTKTIL+ VAG  VSGELTAILGPSGAGKTTLLECISLRNRNFDGCVQYD QAP+GRFFTLSAFVHQ +MLYGFLTPREHLTFHA+ARMSGG      G     +               + S + M +RVE+VI  VKLEKCADTLIGGSDPVF  KGISGGERKRLTIATELL T E IFLDEP++GLDSVMSESIFQTLKDLT + RIV+ATVHCPSSKT+HLFSNLILLTCDGRLAYSGPAA+AL+YFQA L +EC QHYNPADFVLELVS EPGVPL+EE+RRMD LS AYA S M + NPL  DDKHK+LHDVRGQGAS+W  FKLN+WRG L+  RDR+TLILWAAVS L+G+LFG+LYWQLAASNWRNLMGLIFSAVVGNVFTGCLGVVMRFP+EWTLV RE+ SGANA+GPY++ARF TTLPLSYGP LM+SIIYW TGMDPDAG Y++FVLIFV++NW+CFSLGQW+SSFSANPLVAM+IMP F T
Sbjct:    1 MMTHEDYKDASVVDQTPTNNLAVKIQHKLEWHVESFKVQIRRS-RAPGKGTASTTTQTTKTILQKVAGCAVSGELTAILGPSGAGKTTLLECISLRNRNFDGCVQYDGQAPEGRFFTLSAFVHQADMLYGFLTPREHLTFHAIARMSGGSRTAARG---LPEPGASQTSRGQSWQAEKMSSESMARRVEEVIATVKLEKCADTLIGGSDPVFNVKGISGGERKRLTIATELLQTNEIIFLDEPSSGLDSVMSESIFQTLKDLTTQGRIVIATVHCPSSKTYHLFSNLILLTCDGRLAYSGPAAQALSYFQAALGIECPQHYNPADFVLELVSAEPGVPLQEELRRMDALSLAYAQSFMKIQNPLPADDKHKALHDVRGQGASDWVFFKLNLWRGGLQLARDRITLILWAAVSALIGALFGVLYWQLAASNWRNLMGLIFSAVVGNVFTGCLGVVMRFPMEWTLVVREFSSGANAVGPYMIARFFTTLPLSYGPVLMSSIIYWCTGMDPDAGTYLIFVLIFVSFNWSCFSLGQWISSFSANPLVAMTIMPGFVT 549          
BLAST of NO05G04760 vs. NCBI_GenBank
Match: EWM24668.1 (abc subfamily abcg [Nannochloropsis gaditana])

HSP 1 Score: 551.2 bits (1419), Expect = 3.600e-153
Identity = 267/473 (56.45%), Postives = 344/473 (72.73%), Query Frame = 0
Query:   79 LGPSGAGKTTLLECISLRNRNFDGCVQYDRQAPQGRFFTLSAFVHQEEMLYGFLTPREHLTFHAVARMSGGGGGWCIGGGPNHDGKVXXXXXXNGSHLRQTSRKVMGQRVEQVIKEVKLEKCADTLIGGSDPVFAAKGISGGERKRLTIATELLLTPEAIFLDEPNTGLDSVMSESIFQTLKDLTNEARIVVATVHCPSSKTFHLFSNLILLTCDGRLAYSGPAAEALAYFQATLAMECRQHYNPADFVLELVSPEPGVPLEEEIRRMDVLSHAYAHSGMHVTNPLAPDDKHKSLHDVRGQGASNWTLFKLNVWRGMLEFKRDRVTLILWAAVSVLLGSLFGILYWQLAASNWRNLMGLIFSAVVGNVFTGCLGVVMRFPLEWTLVCREYYSGANAMGPYIVARFLTTLPLSYGPFLMASIIYWATGMDPDAGKYVVFVLIFVTYNWTCFSLGQWVSSFSANPLVAMSIMPAF 552
            +GPSGAGKTTLLECISLRNR F+G V YD + P G FFT S  VHQ+E+L+GF+TPREHL FHA+ARMS            NH                  + + +  RVE+V++EVKLEKCADT++GG+DP++  KG+SGGERKRL+IA ELLL P+ IFLDEP++GLDSVMSESIF TLKDLT   RIVVA+VHCPSS+    F++++LLT DGRLAY G    A+ YF ++L+ +C ++YNP+DF L+L+S  PG    +E  RM+ L  AY  S M    PLAPD+ HK    V G  AS+WTLFK+N+WR  ++ +RD VT +LW  VS L+G LFGILYWQ A SNWRNL+GL+FS VV N+FT  L V+MRFPL+W +V REY+SG+NA+GPY+VARF+   P+ YGPFL+ +++YW TGMD D GK+V+F L F++ NW   S+GQ+VSSFSANP + ++I+PAF
Sbjct:    1 MGPSGAGKTTLLECISLRNRKFEGAVHYDNRGPTGEFFTCSVLVHQKELLFGFMTPREHLLFHAIARMS-----------KNH------------------TIEQINARVEEVLQEVKLEKCADTIVGGTDPIYMRKGLSGGERKRLSIAAELLLAPQLIFLDEPSSGLDSVMSESIFGTLKDLTQSGRIVVASVHCPSSEMCQQFTHVLLLTFDGRLAYHGRQDAAIRYF-SSLSYQCPENYNPSDFYLKLISATPGADPAQEKARMNQLVAAYNASDMVRKTPLAPDETHKQFQMVFGH-ASSWTLFKINLWRAFIQLQRDWVTFVLWGLVSALVGGLFGILYWQQARSNWRNLLGLLFSVVVANLFTSSLAVMMRFPLDWAIVVREYFSGSNAIGPYLVARFIVDAPMGYGPFLLITLLYWMTGMDSDIGKFVIFALTFISGNWASTSMGQYVSSFSANPFIGLTILPAF 442          
BLAST of NO05G04760 vs. NCBI_GenBank
Match: EWM26638.1 (abc subfamily abcg [Nannochloropsis gaditana])

HSP 1 Score: 543.5 bits (1399), Expect = 7.600e-151
Identity = 268/527 (50.85%), Postives = 360/527 (68.31%), Query Frame = 0
Query:   25 IKHSLEWHVKSFRVRPRRTRRSSSSSDKATAAPTTKTILRDVAGRTVSGELTAILGPSGAGKTTLLECISLRNRNFDGCVQYDRQAPQGRFFTLSAFVHQEEMLYGFLTPREHLTFHAVARMSGGGGGWCIGGGPNHDGKVXXXXXXNGSHLRQTSRKVMGQRVEQVIKEVKLEKCADTLIGGSDPVFAAKGISGGERKRLTIATELLLTPEAIFLDEPNTGLDSVMSESIFQTLKDLTNEARIVVATVHCPSSKTFHLFSNLILLTCDGRLAYSGPAAEALAYFQATLAMECRQHYNPADFVLELVSPEPGVPLEEEIRRMDVLSHAYAHSGMHVTNPLAPDDKHKSLHDVRGQGASNWTLFKLNVWRGMLEFKRDRVTLILWAAVSVLLGSLFGILYWQLAASNWRNLMGLIFSAVVGNVFTGCLGVVMRFPLEWTLVCREYYSGANAMGPYIVARFLTTLPLSYGPFLMASIIYWATGMDPDAGKYVVFVLIFVTYNWTCFSLGQWVSSFSANPLVAMSIMPAF 552
            I+H+LEWHV+++ V              A      + IL+ +AG+T SG+LTAI+GPSG GKTTLLECISLRNR FDG V +D +AP G  FT+S  VHQ+E+L+GF+TPRE+LTFH +ARM                                 +R  + QR+++V+ ++KLEKCADTL+GG+DP F  KG+SGGERKRL IA E+LL P  IFLDEP++GLDSVMSESIFQ+LKDL +  RIV+A+VHCPSS+   LFS+L+LLT DGR+AY GP  + + YF A L   C +HYNPADF L+L+S  PG   E E++RMD+L+ A+  S M +  PL  D+KH+ L  V G  AS +T  KLN WR  L  +RD+  ++LW  +S ++G L GI+Y Q A ++WRNL+GL+FS VV ++F G LGV+MRFP EW ++ RE YSG NA+GPY+ A F   LP++YGPFL+ +++YW TGMDP+   Y+ F  I+++++  C  LGQ+VSS S NP+V M+I+PAF
Sbjct:   22 IRHTLEWHVEAYMV-------------PAGKKGEFRNILQGIAGKTESGQLTAIMGPSGCGKTTLLECISLRNRRFDGAVHFDGRAPGGDAFTVSVLVHQKELLFGFMTPREYLTFHGLARME-----------------------------HTHTRAQIDQRIQEVLSDMKLEKCADTLVGGTDPFFQKKGLSGGERKRLAIAYEMLLAPSMIFLDEPSSGLDSVMSESIFQSLKDLADGGRIVLASVHCPSSEACQLFSHLMLLTYDGRVAYHGPTLQGIGYFSA-LKYFCPEHYNPADFYLKLISFTPGAEAEGEVQRMDLLNDAFQKSDMRLMKPLPTDNKHRGLAGVHGIKASTFTFLKLNFWRATLRLRRDKTFVVLWGIISFIVGLLLGIIYLQQAPASWRNLLGLLFSLVVADIFMGSLGVIMRFPSEWAIIVRECYSGVNAVGPYLFASFWGILPMAYGPFLLVTVMYWMTGMDPNFVAYLKFAGIYLSFDIACLELGQFVSSLSGNPMVGMTILPAF 505          
BLAST of NO05G04760 vs. NCBI_GenBank
Match: EWM27089.1 (abc subfamily abcg [Nannochloropsis gaditana])

HSP 1 Score: 412.9 bits (1060), Expect = 1.500e-111
Identity = 239/556 (42.99%), Postives = 330/556 (59.35%), Query Frame = 0
Query:   16 RPLSSSAAPIKHSLEWHVKSFRVRPRR----TRRSSSSSDKATAAPTTKTILRDVAGRTVSGELTAILGPSGAGKTTLLECISLRNRNFDGCVQYDRQAPQGRFFTLSAFVHQEEMLYGFLTPREHLTFHAVARMSGGGGGWCIGGGPNHDGKVXXXXXXNGSHLRQTSRKVMGQRVEQVIKEVKLEKCADTLIGGSDPVFAAKGISGGERKRLTIATELLLTPEAIFLDEPNTGLDSVMSESIFQTLKDLTNEARI-VVATVHCPSSKTFHLFSNLILLTCDGRLAYSGPAAEALAYFQATLAMECRQHYNPADFVLELVSPEPG---VPLEEEIRRMDVLSHAYAHS----------GMHVTNPLAPDDKHKSLHDVRGQGASNWTLFKLNVWRGMLEFKRDRVTLILWAAVSVLLGSLFGILYWQLAASNWRNLMGLIFSAVVGNVFTGCLGVVMRFPLEWTLVCREYYSGANAMGPYIVARFLTTLPLSYGPFLMASIIYWATGMDPDAGKYVVFVLIFVTYNWTCFSLGQWVSSFSANPLVAMSIMPAFTT 554
            RP   S  P  + L WH++SF+V  +R    T+RS             K+IL DVAG++V GE+TAI+G SGAGKTTLLEC++LR+R F G V ++ +A +G +FT SA VHQ E+L GFLT  EHL FH  ARMS                              + S K +  RV  VI++V L KC  TL+GG       KG+SGGERKRLTIATELLL P+AIFLDEP T LDSVM+  +   L+ L    RI V+AT+H PSS+ F LFS+++LLT DGRLA+ G  + AL Y  + L       YNPAD ++ LV  +PG      EE  +  D L  ++A S          G H  +    ++ H+SL  V+GQ AS WTLF+LN+ RG+L+  R+ ++  L+  V  ++G  FG LY+Q AAS+WRNL+GL+++ VV  ++   L V++R PL+W L+ REY++GANA GPY++A+ L  LP +YGP L+ + +YW TG+ P    ++ F  +         ++   V S SANP++ + I+PAF T
Sbjct:   31 RPAPGSYLP--NQLTWHIRSFKVGSQRCWPWTKRSIQ----------RKSILTDVAGQSVGGEITAIMGASGAGKTTLLECLALRSRQFKGRVTWNGEAVRGDYFTASALVHQREVLCGFLTVEEHLLFHGTARMSD-----------------------------RFSPKEIEARVRNVIEDVGLSKCRKTLVGGPGAPQNKKGLSGGERKRLTIATELLLCPQAIFLDEPTTSLDSVMAGHVVALLRQLALSRRILVMATIHAPSSQIFSLFSHVLLLTNDGRLAFHGTISNALLYASSCLKRPLPDAYNPADHLVRLVVSKPGGGASAREERRKENDWLVQSFAASAYGDPELPERGSH-RDKACEENSHRSLRGVQGQHASAWTLFRLNLRRGLLQTSRNSLSFWLYGMVMGVIGLCFGTLYFQQAASSWRNLVGLLYALVVALLYMCPLTVILRAPLDWPLLLREYFAGANAAGPYLLAKILYELPFAYGPLLLVAFLYWMTGLTPSLAAFLQFAGVVALTTQASCAMALMVGSLSANPMLTLGILPAFIT 544          
BLAST of NO05G04760 vs. NCBI_GenBank
Match: EWM27013.1 (white [Nannochloropsis gaditana])

HSP 1 Score: 355.9 bits (912), Expect = 2.200e-94
Identity = 197/508 (38.78%), Postives = 294/508 (57.87%), Query Frame = 0
Query:   55 AAPTTKTILRDVAGRTVSGELTAILGPSGAGKTTLLECISLRNRNFDGCVQYDRQAPQGRFFTLSAFVHQEEMLYGFLTPREHLTFHAVARMSGGGGGWCIGGGPNHDGKVXXXXXXNGSHLRQTSRKVMGQRVEQVIKEVKLEKCADTLIGGSDPVFA-AKGISGGERKRLTIATELLLTPEAIFLDEPNTGLDSVMSESIFQTLKDLT-----NEARIVVATVHCPSSKTFHLFSNLILLTCDGRLAYSGPAAEALAYFQATLAMECRQHYNPADFVLELVSPEPGVPLEEEIRRMDVLSHAYAHSGMHVTNPLAPDDKHKSLHDVR---GQGASNWTLFKLNVWRGMLEFKRDRVTLILWAAVSVLLGSLFGILYWQLAASNWRNLMGLIFSAVVGNVFTGCLGVVMRFPLEWTLVCREYYSGANAMGPYIVARFLTTLPLSYGPFLMASIIYWATGMDPDAGKYVVFVLIFVTYNWTCFSLGQWVSSFSANPLVAMSIMPAFTT 554
            + P  K IL D+AGRTV+GE TA++GPSGAGKTTL++CI+LR R+F+G +  D ++P+  +FT + +VHQ+E+ +  LT REHL FHA+ R+ G                            + T  + M +RV++VI EV+L +CADT+IGG +  FA  KG+SGGERKRL+I TELL  P+ IFLDEP +GLDSVM E +   L  L         R+++  +H PSS+ +  FS+++LL   G +AY G       YF+ +L  +   +YNPADF LE+VS +PG  ++ +     V + A     M   N L P+  H +   V    G GA      K+N+WR + +  RD+ TL     + ++LG +FG+L+   A S+WRNLMG++F+ VV  +    + V ++FP+EW++  REYY+GANA+GPY + R +  +P      L+  + YW +G+      ++ +  IF        S G   SSFSA+P++ ++I P   T
Sbjct:   60 STPKGKQILHDIAGRTVTGEFTALMGPSGAGKTTLMDCIALRQRSFEGAIHVDGRSPKSDYFTQTGYVHQKELFFSSLTSREHLVFHAINRLGG----------------------------KYTKDQCM-KRVDEVINEVELARCADTIIGGGE--FALVKGLSGGERKRLSIGTELLSHPKIIFLDEPTSGLDSVMGELVTNLLAALATGKNGGPRRVIMCVIHTPSSRMWSHFSHVLLLATGGFMAYHGTREALFPYFK-SLGYDVPPNYNPADFALEVVSAKPGAEVQGKTAVWIVENFA---KRMEKFNRLPPETNHHTFTGVATSGGTGAGYLLQTKMNIWRAVTQSSRDKGTLYALVGMLLILGMVFGLLFLNQAHSSWRNLMGMMFALVVAVLILCSMNVALKFPVEWSIFMREYYTGANALGPYFIGRTIADIPFLALFLLLVIVPYWMSGLTASFASFIRYCFIFFLIINGSASTGYLASSFSADPVLGLAITPVIDT 532          
BLAST of NO05G04760 vs. NCBI_GenBank
Match: EWM24607.1 (abc subfamily abcg [Nannochloropsis gaditana])

HSP 1 Score: 324.7 bits (831), Expect = 5.500e-85
Identity = 198/551 (35.93%), Postives = 297/551 (53.90%), Query Frame = 0
Query:   29 LEWHVKSFRVRPRRTRRSSSSSDKATAAPTTKTILRDVAGRTVSGELTAILGPSGAGKTTLLECISLRNRNFDGCVQYDRQAPQGRFFTLSAFVHQEEMLYGFLTPREHLTFHAVARMSGGGGGWCIGGGPNHDGKVXXXXXXNGSHLRQTSRKVMGQRVEQVIKEVKLEKCADTLIGGSDPVFAAKGISGGERKRLTIATELLLTPEAIFLDEPNTGLDSVMSESIFQTLKDLTNEA--RIVVATVHCPSSKTFHLFSNLILLTCDGRLAYSGPAAEALAYFQATLAMECRQHYNPADFVLELVSPE--------PGVPLEEEIRRMDVLSHAY----AHSGMHVT----------NPLAPDDKHKSLHDVRGQGASNWTL-FKLNVWRGMLEFKRDRVTLILWAAVSVLLGSLFGILYW-QLAASNWRNLMGLIFSAVVGNVFTGCLGVVMRFPLEWTLVCREYYSGANAMGPYIVARFLTTLPLSYGPFLMASIIYWATGMDPDAGKYVVFVLIFVTYNWTCFSLGQWVSSFSANPLVAMSIMPAFTT 554
            LEW++  + ++ ++ +              + T+LR +AGR  +G   A++GPSG GKT+LL+C++LR R+F+G +  + +A  G +F  + +VHQ+E+ +  LT REHL FHA+  +S                             R  S +    RVE V++EV L K  D  IGG D ++   GISGGERKRL IATELL  P  + LDEP +GLDSVM E +   LK +  +A  R+V+A +H PSS+ F L S++ LLT  G LAY GP  + L + +  L   C  ++NPADF+LEL S +        PG    +E+     +S +       SG  V            PL  +++HK +  V+G GASNW + F+ N+WR  L  +R+ V L +   ++  LG +FG+LY+ Q+   N RN  G +FS +V  +    + V M FP ++ ++ REYY+G N+   Y + R L + P S    +M  + Y+  G+ P A  +  + L+F   N+   S+G   SSFSANP+V +SI+P F T
Sbjct:   75 LEWNISKYEIKLKKRK--------------SLTVLRSIAGRAENGSFNAVMGPSGCGKTSLLQCLALRTRDFEGSLTLNGKALTGAYFAHTGYVHQKELFFPHLTVREHLVFHALNHLS-----------------------------RHKSLEECIARVEAVMEEVDLTKVGDQKIGGGD-LYLVAGISGGERKRLNIATELLGNPRILLLDEPTSGLDSVMGELVCLLLKSIAVQAPRRLVLAAIHTPSSRVFTLVSHVTLLTSHGELAYWGPRDKLLLFLEG-LGYRCPSYFNPADFILELASAKVIAGQAGAPGGVGGQELASPGNVSGSLLVESTSSGKLVAACKSTLSRDLAPLGVNNRHKEVVGVQGPGASNWAVSFRTNLWRSWLSQRREYVGLAVAVLMNTALGLVFGVLYFQQIPHDNGRNTAGYLFSLLVTLLIASSIAVCMNFPFDFAILMREYYAGVNSPLGYFLGRTLASEPPSLAFMIMGILPYFMVGLAPSAVAFGWYCLLFFIVNFAAQSIGYLASSFSANPVVGLSILPLFIT 580          
BLAST of NO05G04760 vs. NCBI_GenBank
Match: XP_005855786.1 (abc subfamily abcg, partial [Nannochloropsis gaditana CCMP526] >EKU20572.1 abc subfamily abcg, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 282.7 bits (722), Expect = 2.400e-72
Identity = 177/399 (44.36%), Postives = 230/399 (57.64%), Query Frame = 0
Query:   16 RPLSSSAAPIKHSLEWHVKSFRVRPRR----TRRSSSSSDKATAAPTTKTILRDVAGRTVSGELTAILGPSGAGKTTLLECISLRNRNFDGCVQYDRQAPQGRFFTLSAFVHQEEMLYGFLTPREHLTFHAVARMSGGGGGWCIGGGPNHDGKVXXXXXXNGSHLRQTSRKVMGQRVEQVIKEVKLEKCADTLIGGSDPVFAAKGISGGERKRLTIATELLLTPEAIFLDEPNTGLDSVMSESIFQTLKDLTNEARI-VVATVHCPSSKTFHLFSNLILLTCDGRLAYSGPAAEALAYFQATLAMECRQHYNPADFVLELVSPEPG---VPLEEEIRRMDVLSHAYAHS----------GMHVTNPLAPDDKHKSLHDVRGQGASNWTLFKLNVWRGML 397
            RP   S  P  + L WH++SF+V  +R    T+RS             K+IL DVAG++V GE+TAI+G SGAGKTTLLEC++LR+R F G V ++ +A +G +FT SA VHQ E+L GFLT  EHL FH  ARMS                              + S K +  RV  VI++V L KC  TL+GG       KG+SGGERKRLTIATELLL P+AIFLDEP T LDSVM+  +   L+ L    RI V+AT+H PSS+ F LFS+++LLT DGRLA+ G  + AL Y  + L       YNPAD ++ LV  +PG      EE  +  D L  ++A S          G H  +    ++ H+SL  V+GQ AS WTLF+LN+ RG+L
Sbjct:   31 RPAPGSYLP--NQLTWHIRSFKVGSQRCWPWTKRSIQ----------RKSILTDVAGQSVGGEITAIMGASGAGKTTLLECLALRSRQFKGRVTWNGEAVRGDYFTASALVHQREVLCGFLTVEEHLLFHGTARMSD-----------------------------RFSPKEIEARVRNVIEDVGLSKCRKTLVGGPGAPQNKKGLSGGERKRLTIATELLLCPQAIFLDEPTTSLDSVMAGHVVALLRQLALSRRILVMATIHAPSSQIFSLFSHVLLLTNDGRLAFHGTISNALLYASSCLKRPLPDAYNPADHLVRLVVSKPGGGASAREERRKENDWLVQSFAASAYGDPELPERGSH-RDKACEENSHRSLRGVQGQHASAWTLFRLNLRRGLL 387          
BLAST of NO05G04760 vs. NCBI_GenBank
Match: EWM21944.1 (white [Nannochloropsis gaditana])

HSP 1 Score: 280.0 bits (715), Expect = 1.600e-71
Identity = 180/548 (32.85%), Postives = 285/548 (52.01%), Query Frame = 0
Query:   12 ASLSRPLSSSAAPIKHS-LEWHVKSFRVRPRRTRRSSSSSDKATAAPTTKTILRDVAGRTVSGELTAILGPSGAGKTTLLECISLRNRNFDGCVQYDRQAPQGRFFTLSAFVHQEEMLYGFLTPREHLTFHAVARMSGGGGGWCIGGGPNHDGKVXXXXXXNGSHLRQTSRKVMGQRVEQVIKEVKLEKCADTLIGGSDPVFAAKGISGGERKRLTIATELLLTPEAIFLDEPNTGLDSVMSESIFQTLKDLTNEARIVVATVHCPSSKTFHLFSNLILLTCDGRLAYSGPAAEALAYFQATLAMECRQHYNPADFVLELVSPEPGVPLEEEIRRMDVLSHAYAHSGMHVTN---------PLAPDDKHKSLHDVRGQGASNWTLFKLNVWRGMLEFKRDRVTLILWAAVSVLLGSLFGILYW--QLAASNWRNLMGLIFSAVVGNVFTGCLGVVMRFPLEWTLVCREYYSGANAMGPYIVARFLTTLPLS-YGPFLMASIIYWATGMDPDAGKYVVFVLIFVTYNWTCFSLGQWVSSFSANPLVAMS 547
            A ++ P      P++ + L W +  +    RR  + ++ + K       KTIL  V G   SG + A++G SGAGK++LL+CISLRN+ F+G V  D +     FF L+A+V+Q+++ +  LT REHL FHA+ RM                              +     +  +RVE ++ +V L+ C+D LIGG+  +   +GISGGERKR+ +ATELL  P  +FLDEP +GLDS M+E++   L+ L N  +IVV  +H PSS TF LF++L LL   GR+AY G   +A+ YF A L   C  ++NPADF +E ++  P    E+ + R+ V++ AY  S +   N          +    + ++   +    A+  T F  +  R +L++KR+ V        S+L+G L G++Y+         +N +G+ F   +    +   GVV   P ++ +  REY +GAN +  Y +AR L+ +P     P +  SI+Y   G+ P AG Y+ F L+ +    T  S+G  +S+   N   A++
Sbjct:   25 ALVTSPDGKKPGPVRGAHLGWTLNLYATETRRGAKGNNVTVK-------KTILEGVTGSVRSGNMMALMGASGAGKSSLLDCISLRNQKFEGNVFVDGKPADNAFFGLTAYVYQDDLFFPTLTVREHLRFHAMVRMP-----------------------------KTVQPHIKAERVESILLDVGLQGCSDALIGGASSLI--RGISGGERKRVAVATELLSNPAILFLDEPTSGLDSFMAEAVCTLLRKLANTGKIVVCVIHQPSSDTFKLFTHLCLL-AKGRMAYLGELPKAVDYF-AALGHACPPNFNPADFFIEELAVVPS-DYEKSMARLRVVTDAYQDSDLRKQNEKWLSKVDPAVLSKPRRRTGIAITEYPATADTQFWESCRRTILQYKREPVLTRARLVNSILMGVLLGLVYFDQDTTYKAVQNKIGVAFIVTMNQCISATFGVVQEVPRDFAVFMREYLAGANRVSSYFLARTLSEIPFQILFPLVFGSIVYGMVGLRPTAGAYITFCLVLILCANTAVSMGYALSAVFRNTTAAIA 531          
BLAST of NO05G04760 vs. NCBI_GenBank
Match: EWM21831.1 (abc subfamily abcg [Nannochloropsis gaditana])

HSP 1 Score: 271.6 bits (693), Expect = 5.600e-69
Identity = 169/506 (33.40%), Postives = 270/506 (53.36%), Query Frame = 0
Query:   59 TKTILRDVAGRTVSGELTAILGPSGAGKTTLLECISLRNRNFDGCVQYDRQAPQGRFFTLSAFVHQEEMLYGFLTPREHLTFHAVARMSGGGGGWCIGGGPNHDGKVXXXXXXNGSHLRQTSRKVMGQRVEQVIKEVKLEKCADTLIGGSDPVFAAKGISGGERKRLTIATELLLTPEAIFLDEPNTGLDSVMSESIFQTLKDLTNEARIVVATVHCPSSKTFHLFSNLILLTCDGRLAYSGPAAEALAYFQATLAMECRQHYNPADFVLELVSPEPGVPLEEE--IRRMDVLSHAYAHSGMHVTNPLAPDD--------KHKSLHDVRGQGASNWTLFKLNVWRGMLEFKRDRVTLILWAAVSVLLGSLFGILYWQL--AASNWRNLMGLIFSAVVGNVFTGCLGVVMRFPLEWTLVCREYYSGANAMGPYIVARFLTTLPLS-YGPFLMASIIYWATGMDPDAGKYVVFVLIFVTYNWTCFSLGQWVSSFSANPLVAMSIMPAF 552
            +K IL +VAG   SG++ A++G SGAGK+T L+C+SLRN+ F G V  + +    +++ ++ FV+QE++    +T REHLTFHA+ RM             N D  V                    +RVE V+ EV +  C +T+IGG  P    +GISGGE+KRL   TELL  P  +F DEP +GLDS M+  +  T+++L ++ +I++  +H PSS+TF LF++L+LL   GR+ Y+GP A   +YF ++L + C   +NPADF +  +S    VP E+E  + R+  L  AY +S +   N     +        KHK++  ++   AS WT F   + R +    R    +      S+++G + G +Y+       + +N+MGL F  ++        GV+  FP E  +  RE  SGAN +  Y +AR L+ LP +   P + A+I+Y    + P AG++  ++   +       S+G  +SS +++  VA ++ P F
Sbjct:  145 SKEILSNVAGSVKSGQMMAVMGSSGAGKSTFLDCVSLRNQQFSGNVYINGKPADEKYYFMTGFVYQEDLFIPTMTVREHLTFHAMVRM-------------NSDIPVEKRL----------------ERVEDVLMEVAMSHCPETIIGG--PGTGYRGISGGEKKRLAFGTELLNNPSIVFADEPTSGLDSFMTRGVCMTMRELADDGKIIMCVIHQPSSQTFDLFTHLLLL-AKGRIVYNGPMATLQSYF-SSLGVICPHFHNPADFFINQISI---VPTEQEASMARLQSLWDAYENSNLAAGNMAWKAEMPAEILNLKHKAV-SMKHFHASTWTQFYYTMKRNIQNEFRRATDVKAKFMNSLVMGMILGTIYFGQTDTQESAKNIMGLFFLIIMFQTMVSMFGVLQAFPSECKVFIRENLSGANRVSSYFLARTLSELPSTIIYPSIFAAIVYGMADLQPTAGRFYFYIFTIILVANCATSVGYMISSMTSHEAVAYALAPLF 613          
The following BLAST results are available for this feature:
BLAST of NO05G04760 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005854935.14.300e-23173.24atp-binding cassette [Nannochloropsis gaditana CCM... [more]
EWM27919.14.800e-23073.06abc subfamily abcg [Nannochloropsis gaditana][more]
EWM24668.13.600e-15356.45abc subfamily abcg [Nannochloropsis gaditana][more]
EWM26638.17.600e-15150.85abc subfamily abcg [Nannochloropsis gaditana][more]
EWM27089.11.500e-11142.99abc subfamily abcg [Nannochloropsis gaditana][more]
EWM27013.12.200e-9438.78white [Nannochloropsis gaditana][more]
EWM24607.15.500e-8535.93abc subfamily abcg [Nannochloropsis gaditana][more]
XP_005855786.12.400e-7244.36abc subfamily abcg, partial [Nannochloropsis gadit... [more]
EWM21944.11.600e-7132.85white [Nannochloropsis gaditana][more]
EWM21831.15.600e-6933.40abc subfamily abcg [Nannochloropsis gaditana][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL085nonsL085Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR117ngnoR117Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003374NSK003374Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G04760.1NO05G04760.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO05G04760.2NO05G04760.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|585222gene_3294Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100285g3gene2639Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G04760.1NO05G04760.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO05G04760.2NO05G04760.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G04760 ID=NO05G04760|Name=NO05G04760|organism=Nannochloropsis oceanica|type=gene|length=2678bp
AACAGGGCACCATGACCACGCGGCCCACGGTCGTCGACGAGGCCGCCTCT
CTGTCCCGCCCTTTGAGCTCCAGTGCTGCCCCAATTAAACACAGTCTAGA
GTGGCATGTGAAGTCCTTTCGTGTGCGGCCAAGACGCACACGCAGAAGCA
GCAGCAGCAGTGATAAGGCCACCGCTGCACCCACAACCAAGACTATCCTG
CGAGATGTGGCGGGGCGGACGGTCAGTGGGGAGCTTACCGCCATTCTCGG
ACCTAGTGGCGCGGGCAAGACGACGCTACTGGAGTGCATTTCGCTTCGCA
ACAGGAATTTTGATGGGTGCGTGCAGTATGACAGACAGGCACCGCAAGGA
CGATTCTTCACGCTCTCCGCCTTTGTCCATCAGGAGGAGATGTTGTACGG
CTTTTTGACCCCCCGTGAACATCTAACTTTCCACGCCGTTGCCCGCATGA
GCGGTGGCGGAGGTGGTTGGTGTATTGGTGGTGGGCCAAACCACGACGGC
AAAGTCGACGGCAAAGTCGACGGCAACGGCAGCCATCTCCGCCAAACGTC
GCGAAAAGTGATGGGCCAGCGGGTGGAACAGGTCATCAAGGAGGTCAAGC
TTGAGAAATGTGCAGATACATTGATTGGTGGAAGTGACCCCGTCTTTGCT
GCCAAGGGCATCTCTGGGGGGGAACGGAAGCGTCTGACCATTGCCACGGA
GCTGCTACTCACCCCTGAGGCGATTTTTCTGGACGAACCAAATACTGGCC
TTGACAGTGTGATGTCCGAATCGgtgagtgttttaaaatggaatgggtgg
gtgggaaggacaaaaagggaagtgaaaatgagtgcttgttggagaaggtt
tggagggaaggggggataatgaaaatggaatgctttgcgggcaaatcgat
tcttcaattattcacatccccgtatacttttgatccttcatgtcatttcc
attagATATTTCAAACGCTGAAGGACCTCACAAATGAAGCACGGATCGTT
GTCGCGACAGTTCACTGCCCTTCCTCCAAGACGTTCCACCTCTTCAGCAA
CCTCATCCTCCTGACCTGCGATGGCCGCCTTGCCTACTCCGGCCCTGCCG
CCGAAGCTCTCGCCTATTTCCAAGCCACGTTGGCCATGGAGTGCCGGCAA
CATTACAACCCGGCCGATTTCGTCCTCGAGCTCGTTTCCCCCGAGCCGGG
TGTGCCACTGGAGGAGGAAATCCGTCGGATGGATGTCTTATCCCACGCTT
ACGCGCATTCCGGTATGCATGTCACCAATCCCTTGGCCCCCGACGATAAA
CACAAGTCCTTGCACGATGTTCGGGGGCAAGGGGCGAGTAATTGGACTTT
GTTCAAGCTCAATGTGTGGAGGGGTATGTTGGAGTTCAAAAGAGATAGGG
TCACCCTCATCTTGTGGGCAGCGGTGAGCGTGTTGCTTGGCTCCCTGTTC
GGTATCCTCTACTGGCAGCTTGCTGCGAGCAACTGGCGGAATCTGATGGG
CTTGATTTTCTCGGCAGTCGTCGGAAACGTGTTTACCGGGTGCTTGGGGG
TGGTGATGCGTTTCCCTCTTGAGTGGACCCTGGTGTGCAGGGAGTACTAC
AGCGGAGCAAATGCCATGGGTCCCTACATCGTCGCGCGCTTTTTGACAAC
CTTGCCTTTGTCCTACGGGCCCTTTCTGATGGCATCGATCATCTACTGGG
CTACGGGCATGGACCCGGATGCTGGGAAATATGTGGTGTTTGTCTTGATT
TTCGTGACGTACAATTGGACGTGTTTTTCCTTGGGGCAGTGGGTGAGCTC
CTTCAGCGCGAACCCTTTGGTGGCGATGTCGATCATGCCGGCATTCACAA
CGTAAGTACATTGATTTGAGAGGGGGGCACTCGATGGGTAGGTCTGAGAG
TGGCTTAGGTGGATGGGGTAAGCCGTGCATGCCGCTCCTAGCGCCCTTCT
TCATACTCAAGTATACATATCTTCCTTCCCCTCCCTCGTTCCGTCCTTCC
GCAGACCTATGATCATGTTCTCTGGCCTGCTTATTGAGCGCAGCAGCGTG
CCGGTCTGGCTGGCGTGGATCGAAAAAATCTCCATCGTGAACTACGCCTT
TGACACCTTGATGAGCCAGCAGATGCATATTCTTCCCCCGGGCCAGCCGG
AACAGGTCCAAGCATTTATTCAATTCGATCCGAACCGGATGGGGATGAAT
GTCGTGTTGTTGTGGGTGTTGACGGTGGTATTTCAGATTTTCACCTATGC
GAACTTGGTCGTGCGTTTGCGAGTGTCCCGGGCAGTGTCGTAAAGGGGGG
CAGGGGTGGTTGAAAGGGAGAAAGCGAGCAGGAGCAAGAAAAGAAAGGTG
GCTTGAGGGAGACAGGAAGAAGCTGTACGAGTTTGAAAGTACGACGGTAG
ATATGACCTCTCTAACGGTTGTGTGGCATGATGCAGAAGATATCCCAAAT
GCCTCACTCCCACAAAGTACTACTCAAAAAAGAGGAAATTGCAAACATTC
TCATGAAATGTTGTAGTAAAAAAAAATAGAAGGGGGGAGGAGGCGGATTT
ACGAACATTACATGCACGCGTACAAGTGGCAGTGGAACGATTCAAAGGAG
GGATTGGGGAAAATAAACACAAGTAGGGGGGAAAATTTTTGCAGTAAAAA
ATAAGATCCCAAAATTATATGATAGGAC
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protein sequence of NO05G04760.1

>NO05G04760.1-protein ID=NO05G04760.1-protein|Name=NO05G04760.1|organism=Nannochloropsis oceanica|type=polypeptide|length=649bp
MTTRPTVVDEAASLSRPLSSSAAPIKHSLEWHVKSFRVRPRRTRRSSSSS
DKATAAPTTKTILRDVAGRTVSGELTAILGPSGAGKTTLLECISLRNRNF
DGCVQYDRQAPQGRFFTLSAFVHQEEMLYGFLTPREHLTFHAVARMSGGG
GGWCIGGGPNHDGKVDGKVDGNGSHLRQTSRKVMGQRVEQVIKEVKLEKC
ADTLIGGSDPVFAAKGISGGERKRLTIATELLLTPEAIFLDEPNTGLDSV
MSESIFQTLKDLTNEARIVVATVHCPSSKTFHLFSNLILLTCDGRLAYSG
PAAEALAYFQATLAMECRQHYNPADFVLELVSPEPGVPLEEEIRRMDVLS
HAYAHSGMHVTNPLAPDDKHKSLHDVRGQGASNWTLFKLNVWRGMLEFKR
DRVTLILWAAVSVLLGSLFGILYWQLAASNWRNLMGLIFSAVVGNVFTGC
LGVVMRFPLEWTLVCREYYSGANAMGPYIVARFLTTLPLSYGPFLMASII
YWATGMDPDAGKYVVFVLIFVTYNWTCFSLGQWVSSFSANPLVAMSIMPA
FTTPMIMFSGLLIERSSVPVWLAWIEKISIVNYAFDTLMSQQMHILPPGQ
PEQVQAFIQFDPNRMGMNVVLLWVLTVVFQIFTYANLVVRLRVSRAVS*
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protein sequence of NO05G04760.2

>NO05G04760.2-protein ID=NO05G04760.2-protein|Name=NO05G04760.2|organism=Nannochloropsis oceanica|type=polypeptide|length=554bp
MTTRPTVVDEAASLSRPLSSSAAPIKHSLEWHVKSFRVRPRRTRRSSSSS
DKATAAPTTKTILRDVAGRTVSGELTAILGPSGAGKTTLLECISLRNRNF
DGCVQYDRQAPQGRFFTLSAFVHQEEMLYGFLTPREHLTFHAVARMSGGG
GGWCIGGGPNHDGKVDGKVDGNGSHLRQTSRKVMGQRVEQVIKEVKLEKC
ADTLIGGSDPVFAAKGISGGERKRLTIATELLLTPEAIFLDEPNTGLDSV
MSESIFQTLKDLTNEARIVVATVHCPSSKTFHLFSNLILLTCDGRLAYSG
PAAEALAYFQATLAMECRQHYNPADFVLELVSPEPGVPLEEEIRRMDVLS
HAYAHSGMHVTNPLAPDDKHKSLHDVRGQGASNWTLFKLNVWRGMLEFKR
DRVTLILWAAVSVLLGSLFGILYWQLAASNWRNLMGLIFSAVVGNVFTGC
LGVVMRFPLEWTLVCREYYSGANAMGPYIVARFLTTLPLSYGPFLMASII
YWATGMDPDAGKYVVFVLIFVTYNWTCFSLGQWVSSFSANPLVAMSIMPA
FTT*
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Synonyms
Publications