NO05G04700, NO05G04700 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G04700 vs. NCBI_GenBank
Match: XP_005855715.1 (preprotein translocase subunit YidC [Nannochloropsis gaditana CCMP526] >EKU20637.1 preprotein translocase subunit YidC [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 654.1 bits (1686), Expect = 3.900e-184 Identity = 379/517 (73.31%), Postives = 396/517 (76.60%), Query Frame = 0 Query: 20 MKLLLSLLLLGAIPAQGFLLPTPLHSTPAHAQSSHRRQKAGALKAVVDPNEVAGFVQTHLPSSSQWLLQTLQGVADAAVATAPDAAXXXXXXXXXXXXXXXXXXXXXXXLAAPIGAIEKAITFMHEGLQGAGLTNTYGLSIIAFTVLVKLVTLPLNYKQIESTTKMQAIQPKMKEIQAKYKSDPTVQQQKMAQLYSDNNVNPLAGCLPALVQIPIFISLYRALTNLAAQNELNEPFLWLPNLEGPTYGAGPADGMNWLKQWEGFTPSLGWHDTIAFLTIPLILIVSQSISQQILQPTQNKDDPSAAQSQAILKFLPFMVGYFSLNVPSGLGVYWIANNLITTLTTVAVRAVIQGKEDAAASLVRGGESAPAEPAQEQSGGRVKKTGFGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKFGGLPAVGISNDERMGRTEKGSTVEVLKQEGGLTVLREVKDGSVVSTTVRLTPEEMKRRREALERGEDPAAVGPP-SPTLPEPSNDPRQNKRSKRQKK 536 MKLLL + ++GA QGFL PTP+H ++ HRR + LKAVVDP VA V THLPSSS WLLQTLQGVADAA AT X XXXXXXXXXXXXXXXX LAAPIGAIEKAITFMHE L+GAGL NTYGLSIIAFTVLVKLVTLPLNYKQIESTTKMQAIQPKMKEIQAKYKSDPT+QQQKMAQLYSDNNVNPLAGCLPALVQIPIFISLYRALTNLAA NELNEPFLWLPNLEGPTYGAGPADGMNWLKQWEGFTPSLGWHDTIAFLT+PLILIVSQSISQQILQP NKDDP+A QSQAILKFLPFMVGYFSLNVPSGLGVYWIANNLITT + RKFGGLPAVG+S DER+GRTEKGSTVEVLK+EGGLTVLREVKDG VVSTTVRLTPEEMKRRREAL RGEDPAAVGPP +P PEPSNDPRQNKRSKR+KK Sbjct: 1 MKLLLGICVIGAALTQGFLTPTPMHQAFQDTRTQHRRFASRTLKAVVDPGHVAEVVHTHLPSSSVWLLQTLQGVADAAAATXXXXXXAVEGSXXXXXXXXXXXXXXXXWLAAPIGAIEKAITFMHETLEGAGLQNTYGLSIIAFTVLVKLVTLPLNYKQIESTTKMQAIQPKMKEIQAKYKSDPTLQQQKMAQLYSDNNVNPLAGCLPALVQIPIFISLYRALTNLAAANELNEPFLWLPNLEGPTYGAGPADGMNWLKQWEGFTPSLGWHDTIAFLTVPLILIVSQSISQQILQPAANKDDPNAQQSQAILKFLPFMVGYFSLNVPSGLGVYWIANNLITTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE--------------------------------KRKFGGLPAVGVSQDERLGRTEKGSTVEVLKEEGGLTVLREVKDGEVVSTTVRLTPEEMKRRREALARGEDPAAVGPPTTPKTPEPSNDPRQNKRSKRRKK 485
BLAST of NO05G04700 vs. NCBI_GenBank
Match: EWM28009.1 (Membrane insertion protein, OxaA/YidC [Nannochloropsis gaditana]) HSP 1 Score: 543.5 bits (1399), Expect = 7.400e-151 Identity = 294/357 (82.35%), Postives = 306/357 (85.71%), Query Frame = 0 Query: 6 PSSFFFPDHYQNTVMKLLLSLLLLGAIPAQGFLLPTPLHSTPAHAQSSHRRQKAGALKAVVDPNEVAGFVQTHLPSSSQWLLQTLQGVADAAVATAPDAAXXXXXXXXXXXXXXXXXXXXXXXLAAPIGAIEKAITFMHEGLQGAGLTNTYGLSIIAFTVLVKLVTLPLNYKQIESTTKMQAIQPKMKEIQAKYKSDPTVQQQKMAQLYSDNNVNPLAGCLPALVQIPIFISLYRALTNLAAQNELNEPFLWLPNLEGPTYGAGPADGMNWLKQWEGFTPSLGWHDTIAFLTIPLILIVSQSISQQILQPTQNKDDPSAAQSQAILKFLPFMVGYFSLNVPSGLGVYWIANNLITTL 363 P F F Q +MKLLL + ++GA QGFL PTP+H ++ HRR + LKAVVDP VA V THLPSSS WLLQTLQGVADAA ATAPD A XXXXXXXXXXXX LAAPIGAIEKAITFMHE L+GAGL NTYGLSIIAFTVLVKLVTLPLNYKQIESTTKMQAIQPKMKEIQAKYKSDPT+QQQKMAQLYSDNNVNPLAGCLPALVQIPIFISLYRALTNLAA NELNEPFLWLPNLEGPTYGAGPADGMNWLKQWEGFTPSLGWHDTIAFLT+PLILIVSQSISQQILQP NKDDP+A QSQAILKFLPFMVGYFSLNVPSGLGVYWIANNLITTL Sbjct: 25 PLVFSFSPARQRGIMKLLLGICVIGAALTQGFLTPTPMHQAFQDTRTQHRRFASRTLKAVVDPGHVAEVVHTHLPSSSVWLLQTLQGVADAAAATAPDTAGAVEGSKEMTXXXXXXXXXXXXWLAAPIGAIEKAITFMHETLEGAGLQNTYGLSIIAFTVLVKLVTLPLNYKQIESTTKMQAIQPKMKEIQAKYKSDPTLQQQKMAQLYSDNNVNPLAGCLPALVQIPIFISLYRALTNLAAANELNEPFLWLPNLEGPTYGAGPADGMNWLKQWEGFTPSLGWHDTIAFLTVPLILIVSQSISQQILQPAANKDDPNAQQSQAILKFLPFMVGYFSLNVPSGLGVYWIANNLITTL 381
BLAST of NO05G04700 vs. NCBI_GenBank
Match: XP_005854940.1 (preprotein translocase subunit YidC, partial [Nannochloropsis gaditana CCMP526] >EKU21428.1 preprotein translocase subunit YidC, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 445.7 bits (1145), Expect = 2.100e-121 Identity = 224/236 (94.92%), Postives = 229/236 (97.03%), Query Frame = 0 Query: 143 MHEGLQGAGLTNTYGLSIIAFTVLVKLVTLPLNYKQIESTTKMQAIQPKMKEIQAKYKSDPTVQQQKMAQLYSDNNVNPLAGCLPALVQIPIFISLYRALTNLAAQNELNEPFLWLPNLEGPTYGAGPADGMNWLKQWEGFTPSLGWHDTIAFLTIPLILIVSQSISQQILQPTQNKDDPSAAQSQAILKFLPFMVGYFSLNVPSGLGVYWIANNLITTLTTVAVRAVIQGKEDAA 379 MHE L+GAGL NTYGLSIIAFTVLVKLVTLPLNYKQIESTTKMQAIQPKMKEIQAKYKSDPT+QQQKMAQLYSDNNVNPLAGCLPALVQIPIFISLYRALTNLAA NELNEPFLWLPNLEGPTYGAGPADGMNWLKQWEGFTPSLGWHDTIAFLT+PLILIVSQSISQQILQP NKDDP+A QSQAILKFLPFMVGYFSLNVPSGLGVYWIANNLITTLTTVAVRAVIQGKE+ A Sbjct: 1 MHETLEGAGLQNTYGLSIIAFTVLVKLVTLPLNYKQIESTTKMQAIQPKMKEIQAKYKSDPTLQQQKMAQLYSDNNVNPLAGCLPALVQIPIFISLYRALTNLAAANELNEPFLWLPNLEGPTYGAGPADGMNWLKQWEGFTPSLGWHDTIAFLTVPLILIVSQSISQQILQPAANKDDPNAQQSQAILKFLPFMVGYFSLNVPSGLGVYWIANNLITTLTTVAVRAVIQGKEEEA 236
BLAST of NO05G04700 vs. NCBI_GenBank
Match: CBN75468.1 (Alb3 homolog, thylakoidal inner membrane insertase [Ectocarpus siliculosus]) HSP 1 Score: 286.2 bits (731), Expect = 2.100e-73 Identity = 168/331 (50.76%), Postives = 218/331 (65.86%), Query Frame = 0 Query: 41 TPLHSTPAHAQSSHRRQKAGALKAVVDPNEVAGFVQTHLPSSSQWLLQTLQGVADAAVATAPDAAXXXXXXXXXXXXXXXXXXXXXXXLAAPIGAIEKAITFMHEGLQGAGLTNTYGLSIIAFTVLVKLVTLPLNYKQIESTTKMQAIQPKMKEIQAKYKSDPTVQQQKMAQLYSDNNVNPLAGCLPALVQIPIFISLYRALTNLAAQNELNEPFLWLPNLEGPTYGAGPADGMNWLKQWEGFTPSLGWHDTIAFLTIPLILIVSQSISQQILQPTQNKDDP---SAAQSQAILKFLPFMVGYFSLNVPSGLGVYWIANNLITTLTTVAVR 369 T S PA S+ A L+A+VDP + G WL Q L G+AD VA XXXXXXXXXXXXX + G E AIT +H+ L G+ + YG+SII FT+ VK +T PL Y+Q+ STTKMQ + PK+KE+QA+Y ++P Q + QLY NVNPLAGCLPAL QIPIFISLYR+L NLA +N+L E FLW+P+LEGPT+ + P + M+W+K W P LGWHDTIA++TIP+IL+++QSIS +I+QP ++ P S A SQ I+KFLP M+G+FSL+VPS LG+YWI NN I+T T+V +R Sbjct: 43 TSRSSAPAARPSA---SGARGLQAMVDPGMMHGV-------DPAWLHQVLTGIADGDVAA------------XXXXXXXXXXXXXFHPIQLLTGVTEGAITGLHDVLASMGVPSAYGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWIKDWSDGAPKLGWHDTIAYMTIPIILVITQSISTRIMQPAKDPSQPVDESQAASQNIVKFLPLMIGWFSLSVPSALGLYWILNNFISTATSVFIR 351
BLAST of NO05G04700 vs. NCBI_GenBank
Match: XP_002290516.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED92268.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 278.1 bits (710), Expect = 5.800e-71 Identity = 136/235 (57.87%), Postives = 176/235 (74.89%), Query Frame = 0 Query: 136 IEKAITFMHEGLQGAGL-TNTYGLSIIAFTVLVKLVTLPLNYKQIESTTKMQAIQPKMKEIQAKYKSDPTVQQQKMAQLYSDNNVNPLAGCLPALVQIPIFISLYRALTNLAAQNELNEPFLWLPNLEGPTYGAGPADGMNWL-KQWEGFTPSLGWHDTIAFLTIPLILIVSQSISQQILQPTQNKDDPSAAQSQAILKFLPFMVGYFSLNVPSGLGVYWIANNLITTLTTVAVR 369 IE + +H GL G+ +N +G+SIIA TV++K +T PL Q+EST KMQA+QP +K +QAKY+S+P V QK+A++Y N VNPLAGC+P+LVQIP+FI LYRA+ NLA +N L+EPFL+LPNLEGPTYGA PA G +WL K W P LGW DTIAFL+IP+ L +SQ IS ++QP DDP Q+ ILK LPFM+G+F+LNVP+ LGVYW+ NN++TT TT+ VR Sbjct: 119 IEGLLKLIHGGLDSMGMSSNAWGISIIAMTVVIKALTFPLTKSQLESTNKMQALQPTIKSLQAKYQSNPEVMNQKIAEVYQTNEVNPLAGCIPSLVQIPVFIGLYRAVLNLAKENALDEPFLFLPNLEGPTYGADPAHGSDWLFKNWVDGVPGLGWEDTIAFLSIPVFLTISQVISMNMMQP--KTDDPQQQQANVILKVLPFMIGWFALNVPAALGVYWVVNNIVTTATTLYVR 351
BLAST of NO05G04700 vs. NCBI_GenBank
Match: EWM28575.1 (Membrane insertion protein, OxaA/YidC [Nannochloropsis gaditana]) HSP 1 Score: 275.8 bits (704), Expect = 2.900e-70 Identity = 156/309 (50.49%), Postives = 198/309 (64.08%), Query Frame = 0 Query: 61 ALKAVVDPNEVAGFVQTHLPSSSQWLLQTLQGVADAAVATAPDAAXXXXXXXXXXXXXXXXXXXXXXXLAAPIGAIEKAITFMHEGLQGAGLTNTYGLSIIAFTVLVKLVTLPLNYKQIESTTKMQAIQPKMKEIQAKYKSDPTVQQQKMAQLYSDNNVNPLAGCLPALVQIPIFISLYRALTNLAAQNELNEPFLWLPNLEGPTYGAGPADGMNWL-KQWEGFTPSLGWHDTIAFLTIPLILIVSQSISQQILQPTQNKDDPSAAQSQAILKFLPFMVGYFSLNVPSGLGVYWIANNLITTLTTVAVR 369 AL+ V+ P++V THL + WL QGVADAAV T+ DA + + AI +H L G+ YGL+II FT VKL LP+ YKQ+ES +MQA+ PK KE++ KY + + Q A+LY D VNPLAGCLPAL QIPIFI+LYR+L NLA ++ NEPFLWLP+L GP Y G A G +WL K W P+LGWHDTIAFLTIP+ILI++QSISQ++L P DDP AQ+Q +LK+LP MVGYFSL+VPSGLGVYWI NNLI+T +++++ Sbjct: 108 ALRMVLQPHDVV----THLDPA--WLSHVFQGVADAAV-TSLDATNAAVDATTDAAAKEPGFFDKF------VNTVMGAIEGVHSELVSLGVPGAYGLAIILFTAGVKLALLPVTYKQMESAQRMQALAPKAKELKDKYGKNKALLNQLTAKLYEDAEVNPLAGCLPALAQIPIFIALYRSLINLAGNSDFNEPFLWLPSLAGPLY--GQARGTDWLFKNWVDGVPALGWHDTIAFLTIPVILILTQSISQRLLTPP--SDDPKTAQTQRVLKYLPIMVGYFSLSVPSGLGVYWITNNLISTAISISIK 399
BLAST of NO05G04700 vs. NCBI_GenBank
Match: GAX25463.1 (YidC/Oxa1 family membrane protein insertase [Fistulifera solaris]) HSP 1 Score: 271.6 bits (693), Expect = 5.400e-69 Identity = 144/276 (52.17%), Postives = 191/276 (69.20%), Query Frame = 0 Query: 134 GAIEKAITFMHEGLQGAGL-TNTYGLSIIAFTVLVKLVTLPLNYKQIESTTKMQAIQPKMKEIQAKYKSDPTVQQQKMAQLYSDNNVNPLAGCLPALVQIPIFISLYRALTNLAAQNELNEPFLWLPNLEGPTYGAGPADGMNWL-KQWEGFTPSLGWHDTIAFLTIPLILIVSQSISQQILQPTQNKDDPSAAQSQAILKFLPFMVGYFSLNVPSGLGVYWIANNLITTLTTVAVRAVIQGKEDAAASLVRGGESAPAEPAQEQSGGRVKKTGFG 408 G I + +H GL G+ +N +G+SIIA T+L+K VT PL Q+EST KMQA+QP +KE+QAKY+S+P V QK+A+ Y N++NPLAGCLP+L QIPIFI LYRA+ +LA +N+LNEPFLWLPNLEGPTYGA P G +WL K W PSLGW DTI+FL +P++L+VSQ +S +++QP D + QS AILK LP M+G+FSLNVP+ L VYW NN+ITT ++ +R+ + AA + G S+ A + R K +GFG Sbjct: 85 GPIMFLLQLIHAGLVAVGVSSNAWGVSIIAITLLIKAVTFPLTKTQLESTNKMQAMQPAIKELQAKYQSNPEVMNQKIAEFYQSNDINPLAGCLPSLAQIPIFIGLYRAVLDLAQENKLNEPFLWLPNLEGPTYGADPTSGSDWLFKGWTNGVPSLGWDDTISFLILPVLLVVSQFVSMELMQP--KTTDSAQQQSNAILKALPLMIGWFSLNVPAALCVYWFVNNVITTGLSLFIRSTM---PPPAAMELNTGSSSTTSKAAIFTPPREKPSGFG 355
BLAST of NO05G04700 vs. NCBI_GenBank
Match: GAX15917.1 (YidC/Oxa1 family membrane protein insertase [Fistulifera solaris]) HSP 1 Score: 270.0 bits (689), Expect = 1.600e-68 Identity = 146/306 (47.71%), Postives = 196/306 (64.05%), Query Frame = 0 Query: 68 PNEVAGFVQTHLPSSSQWLLQTLQGVADAAVATAPDAAXXXXXXXXXXXXXXXXXXXXXXXLAAPIGAIEKAITFMHEGLQGAGLT-NTYGLSIIAFTVLVKLVTLPLNYKQIESTTKMQAIQPKMKEIQAKYKSDPTVQQQKMAQLYSDNNVNPLAGCLPALVQIPIFISLYRALTNLAAQNELNEPFLWLPNLEGPTYGAGPADGMNWL-KQWEGFTPSLGWHDTIAFLTIPLILIVSQSISQQILQPTQNKDDPSAAQSQAILKFLPFMVGYFSLNVPSGLGVYWIANNLITTLTTVAVRAVI 372 P ++ +Q SSS +L ++ ADAA A L PI + + +H GL G++ N +G+SIIA T+L+K VT PL Q+EST KMQA+QP +KE+QAKY+S+P V QK+A+ Y N++NPLAGCLP+L QIPIFI LYRA+ +LA +N+LNEPFLWLPNLEGPTYGA P G +WL K W PSLGW DTI+FL +P++L+VSQ +S +++QP D + QS AILK LP M+G+FSLNVP+ L VYW NN+ITT ++ +R+ + Sbjct: 45 PQHMSSILQDAFGSSSTFLADAMEVTADAATEVA------------------KTDNGWFGFLTGPIMFL---LQLIHAGLVAVGVSANAWGVSIIAITLLIKAVTFPLTKTQLESTNKMQAMQPAIKELQAKYQSNPEVMNQKIAEFYQSNDINPLAGCLPSLAQIPIFIGLYRAVLDLAQENKLNEPFLWLPNLEGPTYGADPTSGSDWLFKGWTDGVPSLGWDDTISFLILPVLLVVSQYLSMELMQP--KTTDSAQQQSNAILKVLPLMIGWFSLNVPAALCVYWFVNNVITTGLSLFIRSTM 327
BLAST of NO05G04700 vs. NCBI_GenBank
Match: XP_009037410.1 (hypothetical protein AURANDRAFT_11603, partial [Aureococcus anophagefferens] >EGB08049.1 hypothetical protein AURANDRAFT_11603, partial [Aureococcus anophagefferens]) HSP 1 Score: 264.6 bits (675), Expect = 6.600e-67 Identity = 125/218 (57.34%), Postives = 166/218 (76.15%), Query Frame = 0 Query: 151 GLTNTYGLSIIAFTVLVKLVTLPLNYKQIESTTKMQAIQPKMKEIQAKYKSDPTVQQQKMAQLYSDNNVNPLAGCLPALVQIPIFISLYRALTNLAAQNELNEPFLWLPNLEGPTYGAGPADGMNWLKQWEGFTPSLGWHDTIAFLTIPLILIVSQSISQQILQPTQNKDDPSAAQSQAILKFLPFMVGYFSLNVPSGLGVYWIANNLITTLTTVAVR 369 G+ +YG++I+ FT+L+K VT PLNY+QIESTTKMQA+QP +K IQAKY +DP MA+LY +N +NPLAGCLPALVQIPIFI+LYR+L +LA ++ L E FLW+PNLEGP YGA AD + QW G P LGWHDT+A+L +P +L+V+QS S +LQP + ++ +A S +LK+LP MVG+FSLNVP+GL +YW NN+ITT +T+ +R Sbjct: 1 GVVGSYGVAIVLFTLLLKAVTFPLNYQQIESTTKMQALQPAIKRIQAKYAADPQQMNIMMAELYQENELNPLAGCLPALVQIPIFIALYRSLLSLAKEDLLEESFLWIPNLEGPVYGAQNADWLFKFDQWNGAIPPLGWHDTVAYLALPCLLVVAQSASTTLLQPPADPNNEAAQTSNQVLKYLPLMVGFFSLNVPAGLTIYWFCNNIITTASTLYIR 218
BLAST of NO05G04700 vs. NCBI_GenBank
Match: KOO34133.1 (hypothetical protein Ctob_012564 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 263.8 bits (673), Expect = 1.100e-66 Identity = 143/276 (51.81%), Postives = 191/276 (69.20%), Query Frame = 0 Query: 137 EKAITFMHEGLQGAGLTNTYGLSIIAFTVLVKLVTLPLNYKQIESTTKMQAIQPKMKEIQAKYK-SDPTVQQQKMAQLYSDNNVNPLAGCLPALVQIPIFISLYRALTNLAAQNELNEPFLWLPNLEGPTYGAGPADGMNWL-------KQWEGFTPSLGWHDTIAFLTIPLILIVSQSISQQILQPTQNKDDPSAAQSQAILKFLPFMVGYFSLNVPSGLGVYWIANNLITTLTTVAVRAVIQGKEDAAASLVRGG---ESAPAE-PAQEQSGGR 401 E AIT +H+ L+GAG+ +G +II FT+ +KL+TLPLN +QIEST KMQAIQP K +Q KY+ +DP ++ +LY +N VNPLAGCLP+L QIPIFI+LYR++ NLA + L E FLWLP+LEGP G +WL +W G +P LGWHDT+A+L +P++L++SQ +S IL P DDP+ AQ+QAILKFLP M+G+FSL+VPSGLG+YW+ NN++TTLTTV + K+ A + + GG SAPA+ P Q GR Sbjct: 81 ETAITTLHDALKGAGVVEAFGPAIILFTISLKLLTLPLNKQQIESTAKMQAIQPAAKRLQEKYRNADPARLNLELQKLYQENQVNPLAGCLPSLAQIPIFIALYRSVLNLAKADRLEESFLWLPSLEGPV--DDYTKGTSWLFGNAALGYEWHGLSPPLGWHDTLAYLVLPVLLVLSQYVSMSILTP--KNDDPAQAQTQAILKFLPLMIGWFSLSVPSGLGLYWMTNNILTTLTTVLI------KKGVATTAMAGGPDVSSAPADVPPPPQGFGR 346 The following BLAST results are available for this feature:
BLAST of NO05G04700 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G04700 ID=NO05G04700|Name=NO05G04700|organism=Nannochloropsis oceanica|type=gene|length=2251bpback to top protein sequence of NO05G04700.1 >NO05G04700.1-protein ID=NO05G04700.1-protein|Name=NO05G04700.1|organism=Nannochloropsis oceanica|type=polypeptide|length=537bpback to top Synonyms
Publications
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