NO05G04680, NO05G04680 (gene) Nannochloropsis oceanica

Overview
NameNO05G04680
Unique NameNO05G04680
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4544
Alignment locationchr5:1216720..1221263 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:1216720..1221263 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO05G04680 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL085nonsL085Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR117ngnoR117Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G04680.1NO05G04680.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G04680.1NO05G04680.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G04680 ID=NO05G04680|Name=NO05G04680|organism=Nannochloropsis oceanica|type=gene|length=4544bp
AGGCATACCCCGGTGCTTCATCGCCCATCAGTCATTTTCATCATCTTGAC
CTCCTGACTCATATGCTCTTGGGTTTGTTAGTCCGATATATGAGTACTCC
CAGCCAGCACTAACCGCAATAGCGTCCTCTGCATCTACACCCACGAACTT
TCTTAATCCAAACGAGAACATGGTTCTCATTGGCGTGGGCAGTGACAATT
GGGTTCATGCCTCTGCCGGCGCGCCTCCCTCTGCAGCTGCCGCGGTGGGT
GCTGCCGCGGGTGCTCCAGCTGGTGGTGCTGCCGGTGCCGTGCTACCCAT
TCCTGGTGGTGGGACCGTTGATCTGCATATTGTCTGGCCCGACGAGGACG
GCTTCCACGATTGGCTTGAGGAAGGGGAGGGGCAGATGATAGGCGAGGAG
GAGGAGGAGGAGCCGGAGGAGGGGGAGGAGGATATGAGgtacgtgtgaca
agtcatgcattttgcatcagcaaatggaatgacagaattaatgtttcact
tacttcggaaattccaaatctgctatctatcagcttgtcatcttgcgcag
taccaccgttcctaacacccttcctctcctcttattccgcctcttccatc
gcacatcagCACGCTTCACGCCCATCTCCAACATCCTCACCATACCGAGA
ACAACATGGAGGACGATGACGAAAACACCTCCCACGAGGAAGAAGATGAC
CCGCCACCCCTGAGCCTCCCTATGTCTTTGTACCCTTCTCCTGCTGCAGC
TTCTGTCGTGCTTATTGGCCCCCTCCCTTCGCCCATGTCTCCACTCTCCT
CCTCCTCGCCGCATTACCACGAGCATTTTTTCCCTTACTATGAGGATGAC
CAGGAGCAAGAACAGCAGCAGCAGCAGCAGATGCAGTTACTTAGTTCTCA
CCGACATCGACCAGAGAGGGGCGAGGCCGCAGCTGCGGTTGCTGCTGCCC
CGGCTGCTGTTGCTGCTGCAGATGCCATTGTCAACGACGACTTCACCCTC
CCCTCCCCCCTTTTCCCCTCTTCCGCCCTCTCCCATCACCACCAGAACAA
TTATGAGGAAGACAGCGGTCGACAAGATTTCGCTGCCCTCGCCCTCTCCA
GCCCAACTAGCTCCACTGCTACCGCTGCTTCTGCTGCTACTACTGCTTTC
CTGAGAGAAAGACACGGTTGGTTCCGACAGCCACCACACCGTGACCTGAC
ACTCATCCCACTCACGCCCGGGAGCAGAGAGGAAAGGGGAAAGGGGGAGA
AAGAGTAGTTTGTGTTAATGGAGGGGAAAGAAAAGAGGGAGGGGCGATTG
GGGGAAGGGGGGGGGGGGACTTTCTTGACGTGAGGGAGGAAAACGAGGAG
GAGGGGCGTGAGTGTAATATCTGCATGCCCCTAATCATGACCTTGTGTAT
GGCGACCCTAGGTGTAGTGTGATAGGCAGAAAGAGGGAGAGAGAGGGAGA
AAGGGGCTAGAGAGGGAGAGAGAAGGAGGGAGGGTGTTTTCCATGCAGGC
TGCGTAAGACGGTAGATTGAGAAACATCATTATTGTTCCCGGTAGCCGAT
AGAGAGTATGGGTGAAGGTAAAGGAGGAAGGGAGAGATGATTCGAACGGC
CGTATATAAAAGGCTAGCGTTTGCATGGAGGAGGAGAGGGGAGAGGCGCA
TCTGTATGTATGTATCCATGGCACAAGAGAAAAAGAACCAGCAGTCATAA
CACTAGGAAAAGAAGAAGCAACTGGAGAAGAGGCGGAAATGGGACATTTA
ATCACCCAGAAGTGTATGATTATATCGTATACAAATGAAACGAATAGGGC
AGGGACTCGACAAAAAAAGCGGCAGCACCATCATTAACAACAAGAACGAG
ACAAGGTGCACAAGACACACTATACGAACAAAAAGAAAAAGAATAGCGAG
AGGAAAGCAAGTAGGATGAGGAAGAAAAAGGGAAGGTTGGGTGGCAGTAA
GTGCGAGGGTTGTACACGATAAATCAAAGACGCAAAAGCACCCGGAAATT
GATGAGAATAGTCAGACTAGAAGTCAACCCCAGAAGAGGAACTACCCTGT
ATACCTCTTTCTCTCTTTCACTCGTGTCCAAAACGCAGTCAAAGACCAAC
GCAGGCAGAAAGACGCGAATTTTCCAATGAAAAGCAGAGACAGAGGCCTT
GGTCGCTCGGGATAGAACGAATTGTTGATTCTTCCTCTCTTATTTTTGCT
TCCCTTCTCTTTTGGGTCCTCTGTATCGTTGTTGTCGTTACCGTTGCTCT
TATGTTACAAAAAAACGCTATTCTGCTGGTCTCGCTCTTCCATACTTGCT
TCCCTACTCTATAGCCCAATCGCCCTATTACATTTTTCACTCTGCATATA
CGAAAAAATCATCTTGGTTTCCCACCCTCTTTTTCAGACTCTGGTGTCTC
ATGTTGTTGCATTTACTCTTCTTTCTTATCTCCCTCGCTATCTCCTCTTT
TCGCTTTGTGTATCGGCTGACATAGAGTGCTCATCTGGAGTTTGTCTCCG
CTTTCTCTCCCTCTTCTCACATCCTTTGGGTGGTGAAGATCAAAGCGATG
TGTACTGTACGAGGCCCCTCCTCCTCCTCTCCCTCCCTCTCCTGAGTGTA
TCTCTGATCGACACTCCCTCCCTTCCTTCATCTACCAACACAAATATAGT
ACATATGCTCCCACCTCCCCCCCCCCTTACCCCTTCTGCAGACAATCCAC
GAACTCCCTCACGCACTGAAAAGCCCGAGAGGAACCGGCATCCCAATTCT
CATAAAACGTCCCATGCCCCCCCTTCTCCACATGCAGTACCGTGGCCAGC
TGACATTCCTCCACCAGCTTCTTGAATTGGAAGGTAAAATGACCCGGGAA
GCACATATCGTCGTAGGCATTAATGTACACCACGGGTCGGGCAATCTTGC
CGAGGACCAGCGCCGGGTTATGGGTTTGAAAATACTCTTCTCTAGAGGCC
TTCCCGTCAAAGATATGCAAGTGCTCATGGAACTCCTGCATGGACCTGCT
CCTCTTCAACCGCTGCAAGCCTGGCCCATCCTCTTTCTTCAAGGTCTCCT
CGTTCCGCTCCAGGAAGAAGCTCTTGGCATGGGTGGTCACCACTAAATCC
GCCAATGGCGTCATGTGCTGCAAGGACAGCTCCATATCATATCCCCCTGA
GATCAGAACCCCGCCCTCCAACTCACTCTCTTCCCCTGCATCCCCCAAAT
ACCTGGCCAACAAACTCGAGCCCGCGCTAATCCCCACGCCGTAAAAACAA
TTATTCGGGAAAAAGTCCCTCATCCGAGACAAAATAAATCGAAAATCGCA
CTGGTCCCCGACCGTATTGAACCGCGCTCTCGACAAGGGCATGTCGTTTC
CCCTCCGGTTGAAGACACATGCTATGTATCCGCACGTCTCTGTCAGAAAC
GTGCAAAATTCATACAAATCTGCCGCTGTTTGGAAGACACCATGGCAAAT
GACCACGATGGGCGGAGGCGGGTCATCAGGCGGCATACTGGTAGCAAGAG
CCTGGATAGTTGCTCCCATCTCTTCCTCCCTCCTGTCCTCCTTGCACTGC
ATCAATGCCTCGCGCATCGGCCCCGGGGGTGCCATGTAAAACAAGGAGAC
AGATTCGCCATCAGGTAGCTGAAGCACCTCACGGGCAAAGCCTCGCAAGT
GCTTGTTGCGCCAGCTTCGATACAGGTAGACAATCGCTTGCGCCCATGCC
CCACACGCCCAAGAGGGAGGTCGATAGTCCTTCTGGAAGGAAGGGCAACG
ACGGACAATGTTGCGCATGATGGGGTGCGAACCCACGTAGACCCGGATGG
GATACCGAAGGGTGAGTTTGAGGAGGGAGGCGGAGAGGAAAAGAATGGCG
AGGCAGAGGCGGGGGATCAGGACTTCTAACGTCCAAGCGGCGGCAATGTC
CCCAATGTCACATAGAGGGCTGACGCCCCGGATGGCCATGCCCACAGTCA
TGGGTTAGGAAGGGGCTGGCTTCTGTATCCGTGGCTGAGGGCAGAGGTGG
TACGTAGAACAATACCAGCCCGTGTACGCTTCACCACGCCCCGCTCGAGC
TCTGGAGGACAACCCTAGGAACAACAATATCGACGAGACCAGGGATTCCG
GTGGGTAAGACGAAACGCGAGACCAGCAAATTGGATAAATGAATGCGTCG
AGATGCAAGGCAGCAGGCCGTGAGGGGGCAGGGCACAGAAGGAGGCAGCC
TGTGGAAGTATGCTTGGGAAGGGTAAGAGGTGATTAAGAAACAGGATATA
AATCACATCATGAAGGGATATCTCGCATGCGCACTTCTATACGCGTGCTC
GACAGCATGGCAGAGTGTTGTTAGATCTCGGAACAATGAGATGTGGTGGG
AGAAGCGAGCAAATCCGACTCGTGCTTGGAGCCTTTCGAAACCCGAGCAA
AAACGGCCACGTACCAACACAACAACACTACACCCACCCGTAGATCAGCA
TCACACGGAAAGCCGTCAAGAAGGCAAAGCCAGGCATGCACGCGCGTGCC
CCATGTCCAAGCTGAAGAGGAATCATCACCCACGTGGCTCACCA
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protein sequence of NO05G04680.1

>NO05G04680.1-protein ID=NO05G04680.1-protein|Name=NO05G04680.1|organism=Nannochloropsis oceanica|type=polypeptide|length=306bp
MVLIGVGSDNWVHASAGAPPSAAAAVGAAAGAPAGGAAGAVLPIPGGGTV
DLHIVWPDEDGFHDWLEEGEGQMIGEEEEEEPEEGEEDMSTLHAHLQHPH
HTENNMEDDDENTSHEEEDDPPPLSLPMSLYPSPAAASVVLIGPLPSPMS
PLSSSSPHYHEHFFPYYEDDQEQEQQQQQQMQLLSSHRHRPERGEAAAAV
AAAPAAVAAADAIVNDDFTLPSPLFPSSALSHHHQNNYEEDSGRQDFAAL
ALSSPTSSTATAASAATTAFLRERHGWFRQPPHRDLTLIPLTPGSREERG
KGEKE*
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Synonyms
Publications