NO05G04520, NO05G04520 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G04520 vs. NCBI_GenBank
Match: EWM27956.1 (hypothetical protein Naga_100008g107 [Nannochloropsis gaditana]) HSP 1 Score: 250.8 bits (639), Expect = 3.600e-63 Identity = 128/181 (70.72%), Postives = 152/181 (83.98%), Query Frame = 0 Query: 1 MSVRSCSLAVLGQKRALLAAIQPAQYTQPCVLVGGGSMGQHLRHSLDHYRKLFEGVASPSSST-GASSSPTITTIQYDVRDRGTAIESDLAAARREVDRLMTEIQALPDEALTRPVQAAFVLSAGGEQASLPSTLGRELGFCTHHAIHHHALIRVIASALNINAKLPSDFGLAPSTAHYQK 181 MS+R+ SLAVL QK++LL+A+QPAQYTQPC+LVGGGS+GQHLRHSLDH+RKLFEG+A P + T +SSS + +IQYDVRDRGT IE DL AARREV+RL+ +++AL E L PVQA FVLSA G+ A+L ST+GRELGFCTHHAIHHHALI+ IAS L I A LP DFGLAPSTAH+QK Sbjct: 884 MSLRNASLAVLRQKKSLLSALQPAQYTQPCLLVGGGSVGQHLRHSLDHFRKLFEGIAVPKAGTVSSSSSHSHGSIQYDVRDRGTEIEKDLDAARREVERLIADVKALSSERLKDPVQATFVLSAEGDAAALCSTVGRELGFCTHHAIHHHALIKAIASDLGIQANLPHDFGLAPSTAHHQK 1064
BLAST of NO05G04520 vs. NCBI_GenBank
Match: GAX93207.1 (Hypothetical protein PINS_001092 [Pythium insidiosum]) HSP 1 Score: 134.4 bits (337), Expect = 3.800e-28 Identity = 75/177 (42.37%), Postives = 108/177 (61.02%), Query Frame = 0 Query: 3 VRSCSLAVLGQKRALLAAIQPAQYTQPCVLVGGGSMGQHLRHSLDHYRKLFEGVASPSSSTGASSSPTITTIQYDVRDRGTAIESDLAAARREVDRLMTEIQALPD-EALTRPVQAAFVLSAGGEQASLPSTLGRELGFCTHHAIHHHALIRVIASALNINAKLPSDFGLAPSTAHY 179 VR+C LA+L Q+ ALLA++ P QYT L+ G++GQH RHSLDH RK E V + TI YD+R R T++E+ AAR +++ + + L + AL PVQAAF+LSA G + + STL RE+ F HH IHH+AL++V+ + +P+ +G+APST +Y Sbjct: 32 VRACVLAMLDQQDALLASLSPEQYTFHSALL-QGTIGQHTRHSLDHLRKPLEAVLAADD-----------TIHYDLRARQTSVETSQQAAREQIEEIRRNLDMLAERSALVHPVQAAFMLSADGTEFAFASTLSREMAFAVHHCIHHNALVKVLLRHEFPDVAVPAGYGMAPSTLNY 196
BLAST of NO05G04520 vs. NCBI_GenBank
Match: XP_002905609.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY68450.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 133.3 bits (334), Expect = 8.500e-28 Identity = 73/173 (42.20%), Postives = 104/173 (60.12%), Query Frame = 0 Query: 6 CSLAVLGQKRALLAAIQPAQYTQPCVLVGGGSMGQHLRHSLDHYRKLFEGVASPSSSTGASSSPTITTIQYDVRDRGTAIESDLAAARREVDRLMTEIQALPDEALTRPVQAAFVLSAGGEQASLPSTLGRELGFCTHHAIHHHALIRVIASALNINAKLPSDFGLAPSTAHY 179 C LA+L Q +A L ++ YT LV GS+GQH RHSLDH RK E +A+ + ++ ++YD+RDR T +E D AA +++++L ++ LP + L RPV AAF+LSA G + ST GREL F HH IHH+AL +V+ +P FG+APSTA++ Sbjct: 34 CVLAILDQHKAFLRSVDDVVYTFHSPLV-EGSLGQHTRHSLDHLRKPLELLAAQQQGSDSN------MVRYDIRDRHTPVEKDRHAAIKQIEQLEKTLRTLPQKDLARPVHAAFMLSADGRELDFQSTFGRELAFAVHHCIHHNALSKVLLRHHFPELSVPDRFGMAPSTANF 199
BLAST of NO05G04520 vs. NCBI_GenBank
Match: ETP08566.1 (hypothetical protein F441_15452 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 132.5 bits (332), Expect = 1.400e-27 Identity = 73/178 (41.01%), Postives = 107/178 (60.11%), Query Frame = 0 Query: 6 CSLAVLGQKRALLAAIQPAQYTQPCVLVGGGSMGQHLRHSLDHYRKLFEGVASPSSSTGASSSPTITTIQYDVRDRGTAIESDLAAARREVDRLMTEIQALPDEALTRPVQAAFVLSAGGEQASLPSTLGRELGFCTHHAIHHHALIRVIASALNINAKLPSDFGLAPSTAHYQKSNA 184 C LA+L Q +A L+++ A YT LV GS+GQH RHSLDH RK E +A+ + ++YD+RDR T +E D AA +++++L ++A+P L RPV AAF+LSA G + ST REL F HH IHH+AL +V+ ++P FG+APSTA++ +++ Sbjct: 32 CVLAILEQHKAFLSSLDDAVYTFHSPLV-EGSVGQHTRHSLDHLRKPLELLAARQQGSDED------MVRYDIRDRHTPVEKDRHAAIQQIEQLEKTLRAIPQRDLARPVHAAFMLSADGHEFDFESTFSRELAFAVHHCIHHNALSKVLLRHHFPELRVPDGFGMAPSTANFNLAHS 202
BLAST of NO05G04520 vs. NCBI_GenBank
Match: ETI38658.1 (hypothetical protein F443_15632 [Phytophthora parasitica P1569]) HSP 1 Score: 131.7 bits (330), Expect = 2.500e-27 Identity = 73/178 (41.01%), Postives = 106/178 (59.55%), Query Frame = 0 Query: 6 CSLAVLGQKRALLAAIQPAQYTQPCVLVGGGSMGQHLRHSLDHYRKLFEGVASPSSSTGASSSPTITTIQYDVRDRGTAIESDLAAARREVDRLMTEIQALPDEALTRPVQAAFVLSAGGEQASLPSTLGRELGFCTHHAIHHHALIRVIASALNINAKLPSDFGLAPSTAHYQKSNA 184 C LA+L Q +A L+++ A YT LV GS+GQH RHSLDH RK E +A+ + ++YD+RDR T +E D AA +++++L ++A+P L RPV AAF+LSA G + ST REL F HH IHH+AL +V+ +P FG+APSTA++ +++ Sbjct: 32 CVLAILEQHKAFLSSLDDAVYTFHSPLV-EGSVGQHTRHSLDHLRKPLELLAARQQGSDED------MVRYDIRDRHTPVEKDRHAAIQQIEQLEKTLRAIPQRDLARPVHAAFMLSADGHEFDFESTFSRELAFAVHHCIHHNALSKVLLRHHFPELSVPDGFGMAPSTANFNLAHS 202
BLAST of NO05G04520 vs. NCBI_GenBank
Match: ETP36606.1 (hypothetical protein F442_15472 [Phytophthora parasitica P10297]) HSP 1 Score: 131.3 bits (329), Expect = 3.200e-27 Identity = 73/173 (42.20%), Postives = 104/173 (60.12%), Query Frame = 0 Query: 6 CSLAVLGQKRALLAAIQPAQYTQPCVLVGGGSMGQHLRHSLDHYRKLFEGVASPSSSTGASSSPTITTIQYDVRDRGTAIESDLAAARREVDRLMTEIQALPDEALTRPVQAAFVLSAGGEQASLPSTLGRELGFCTHHAIHHHALIRVIASALNINAKLPSDFGLAPSTAHY 179 C LA+L Q +A L+++ A YT LV GS+GQH RHSLDH RK E +A+ + ++YD+RDR T +E D AA +++++L ++A+P L RPV AAF+LSA G + ST REL F HH IHH+AL +V+ ++P FG+APSTA++ Sbjct: 32 CVLAILEQHKAFLSSLDDAVYTFHSPLV-EGSVGQHTRHSLDHLRKPLELLAARQQGSDED------MVRYDIRDRHTPVEKDRHAAIQQIEQLEKTLRAIPQRDLARPVHAAFMLSADGHEFDFESTFSRELAFAVHHCIHHNALSKVLLRHHFPELRVPDGFGMAPSTANF 197
BLAST of NO05G04520 vs. NCBI_GenBank
Match: ETL85550.1 (hypothetical protein L917_14898, partial [Phytophthora parasitica]) HSP 1 Score: 130.6 bits (327), Expect = 5.500e-27 Identity = 73/173 (42.20%), Postives = 103/173 (59.54%), Query Frame = 0 Query: 6 CSLAVLGQKRALLAAIQPAQYTQPCVLVGGGSMGQHLRHSLDHYRKLFEGVASPSSSTGASSSPTITTIQYDVRDRGTAIESDLAAARREVDRLMTEIQALPDEALTRPVQAAFVLSAGGEQASLPSTLGRELGFCTHHAIHHHALIRVIASALNINAKLPSDFGLAPSTAHY 179 C LA+L Q +A L+++ A YT LV GS+GQH RHSLDH RK E +A+ + ++YD+RDR T +E D AA +++++L ++A+P L RPV AAF+LSA G + ST REL F HH IHH+AL +V+ +P FG+APSTA++ Sbjct: 8 CVLAILEQHKAFLSSLDDAVYTFHSPLV-EGSVGQHTRHSLDHLRKPLELLAARQQGSDED------MVRYDIRDRHTPVEKDRHAAIQQIEQLEKTLRAIPQRDLARPVHAAFMLSADGHEFDFESTFSRELAFAVHHCIHHNALSKVLLRHHFPELSVPDGFGMAPSTANF 173
BLAST of NO05G04520 vs. NCBI_GenBank
Match: XP_008895170.1 (hypothetical protein PPTG_04664 [Phytophthora parasitica INRA-310] >ETN19311.1 hypothetical protein PPTG_04664 [Phytophthora parasitica INRA-310]) HSP 1 Score: 130.6 bits (327), Expect = 5.500e-27 Identity = 72/178 (40.45%), Postives = 107/178 (60.11%), Query Frame = 0 Query: 6 CSLAVLGQKRALLAAIQPAQYTQPCVLVGGGSMGQHLRHSLDHYRKLFEGVASPSSSTGASSSPTITTIQYDVRDRGTAIESDLAAARREVDRLMTEIQALPDEALTRPVQAAFVLSAGGEQASLPSTLGRELGFCTHHAIHHHALIRVIASALNINAKLPSDFGLAPSTAHYQKSNA 184 C LA+L Q +A L+++ A YT LV GS+GQH RHSL+H RK E +A+ + ++YD+RDR T +E D AA +++++L ++A+P L RPV AAF+LSA G + ST REL F HH IHH+AL +V+ ++P FG+APSTA++ +++ Sbjct: 32 CVLAILEQHKAFLSSLDDAVYTFHSPLV-EGSVGQHTRHSLNHLRKPLELLAARQQGSDED------MVRYDIRDRHTPVEKDRHAAIQQIEQLEKTLRAIPQRDLARPVHAAFMLSADGHEFDFESTFSRELAFAVHHCIHHNALSKVLLRHHFPELRVPDGFGMAPSTANFNLAHS 202
BLAST of NO05G04520 vs. NCBI_GenBank
Match: ETO67422.1 (hypothetical protein F444_15615 [Phytophthora parasitica P1976]) HSP 1 Score: 130.2 bits (326), Expect = 7.200e-27 Identity = 73/173 (42.20%), Postives = 103/173 (59.54%), Query Frame = 0 Query: 6 CSLAVLGQKRALLAAIQPAQYTQPCVLVGGGSMGQHLRHSLDHYRKLFEGVASPSSSTGASSSPTITTIQYDVRDRGTAIESDLAAARREVDRLMTEIQALPDEALTRPVQAAFVLSAGGEQASLPSTLGRELGFCTHHAIHHHALIRVIASALNINAKLPSDFGLAPSTAHY 179 C LA+L Q +A L+++ A YT LV GS+GQH RHSLDH RK E +A+ + ++YD+RDR T +E D AA +++++L ++A+P L RPV AAF+LSA G + ST REL F HH IHH+AL +V+ +P FG+APSTA++ Sbjct: 32 CVLAILEQHKAFLSSLDGAVYTFHSPLV-EGSVGQHTRHSLDHLRKPLELLAARQQGSDED------MVRYDIRDRHTPVEKDRHAAIQQIEQLEKTLRAIPQRDLARPVHAAFMLSADGHEFDFESTFSRELAFAVHHCIHHNALSKVLLRHHFPELSVPDGFGMAPSTANF 197
BLAST of NO05G04520 vs. NCBI_GenBank
Match: ETL32307.1 (hypothetical protein L916_15068, partial [Phytophthora parasitica]) HSP 1 Score: 129.8 bits (325), Expect = 9.300e-27 Identity = 72/173 (41.62%), Postives = 104/173 (60.12%), Query Frame = 0 Query: 6 CSLAVLGQKRALLAAIQPAQYTQPCVLVGGGSMGQHLRHSLDHYRKLFEGVASPSSSTGASSSPTITTIQYDVRDRGTAIESDLAAARREVDRLMTEIQALPDEALTRPVQAAFVLSAGGEQASLPSTLGRELGFCTHHAIHHHALIRVIASALNINAKLPSDFGLAPSTAHY 179 C LA+L Q +A L+++ A YT LV GS+GQH RHSL+H RK E +A+ + ++YD+RDR T +E D AA +++++L ++A+P L RPV AAF+LSA G + ST REL F HH IHH+AL +V+ ++P FG+APSTA++ Sbjct: 41 CVLAILEQHKAFLSSLDDAVYTFHSPLV-EGSVGQHTRHSLNHLRKPLELLAARQQGSDED------MVRYDIRDRHTPVEKDRHAAIQQIEQLENTLRAIPQRDLARPVHAAFMLSADGHEFDFESTFSRELAFAVHHCIHHNALSKVLLRHHFPELRVPDGFGMAPSTANF 206 The following BLAST results are available for this feature:
BLAST of NO05G04520 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G04520 ID=NO05G04520|Name=NO05G04520|organism=Nannochloropsis oceanica|type=gene|length=594bpback to top protein sequence of NO05G04520.1 >NO05G04520.1-protein ID=NO05G04520.1-protein|Name=NO05G04520.1|organism=Nannochloropsis oceanica|type=polypeptide|length=198bpback to top Synonyms
Publications
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