NO05G04520, NO05G04520 (gene) Nannochloropsis oceanica

Overview
NameNO05G04520
Unique NameNO05G04520
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length594
Alignment locationchr5:1171132..1171725 +

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Properties
Property NameValue
DescriptionFK506-binding protein 5
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:1171132..1171725 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR034660DinB/YfiT-like
IPR024775DinB-like
Vocabulary: Biological Process
TermDefinition
GO:0016043cellular component organization
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Homology
BLAST of NO05G04520 vs. NCBI_GenBank
Match: EWM27956.1 (hypothetical protein Naga_100008g107 [Nannochloropsis gaditana])

HSP 1 Score: 250.8 bits (639), Expect = 3.600e-63
Identity = 128/181 (70.72%), Postives = 152/181 (83.98%), Query Frame = 0
Query:    1 MSVRSCSLAVLGQKRALLAAIQPAQYTQPCVLVGGGSMGQHLRHSLDHYRKLFEGVASPSSST-GASSSPTITTIQYDVRDRGTAIESDLAAARREVDRLMTEIQALPDEALTRPVQAAFVLSAGGEQASLPSTLGRELGFCTHHAIHHHALIRVIASALNINAKLPSDFGLAPSTAHYQK 181
            MS+R+ SLAVL QK++LL+A+QPAQYTQPC+LVGGGS+GQHLRHSLDH+RKLFEG+A P + T  +SSS +  +IQYDVRDRGT IE DL AARREV+RL+ +++AL  E L  PVQA FVLSA G+ A+L ST+GRELGFCTHHAIHHHALI+ IAS L I A LP DFGLAPSTAH+QK
Sbjct:  884 MSLRNASLAVLRQKKSLLSALQPAQYTQPCLLVGGGSVGQHLRHSLDHFRKLFEGIAVPKAGTVSSSSSHSHGSIQYDVRDRGTEIEKDLDAARREVERLIADVKALSSERLKDPVQATFVLSAEGDAAALCSTVGRELGFCTHHAIHHHALIKAIASDLGIQANLPHDFGLAPSTAHHQK 1064          
BLAST of NO05G04520 vs. NCBI_GenBank
Match: GAX93207.1 (Hypothetical protein PINS_001092 [Pythium insidiosum])

HSP 1 Score: 134.4 bits (337), Expect = 3.800e-28
Identity = 75/177 (42.37%), Postives = 108/177 (61.02%), Query Frame = 0
Query:    3 VRSCSLAVLGQKRALLAAIQPAQYTQPCVLVGGGSMGQHLRHSLDHYRKLFEGVASPSSSTGASSSPTITTIQYDVRDRGTAIESDLAAARREVDRLMTEIQALPD-EALTRPVQAAFVLSAGGEQASLPSTLGRELGFCTHHAIHHHALIRVIASALNINAKLPSDFGLAPSTAHY 179
            VR+C LA+L Q+ ALLA++ P QYT    L+  G++GQH RHSLDH RK  E V +              TI YD+R R T++E+   AAR +++ +   +  L +  AL  PVQAAF+LSA G + +  STL RE+ F  HH IHH+AL++V+      +  +P+ +G+APST +Y
Sbjct:   32 VRACVLAMLDQQDALLASLSPEQYTFHSALL-QGTIGQHTRHSLDHLRKPLEAVLAADD-----------TIHYDLRARQTSVETSQQAAREQIEEIRRNLDMLAERSALVHPVQAAFMLSADGTEFAFASTLSREMAFAVHHCIHHNALVKVLLRHEFPDVAVPAGYGMAPSTLNY 196          
BLAST of NO05G04520 vs. NCBI_GenBank
Match: XP_002905609.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY68450.1 conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 133.3 bits (334), Expect = 8.500e-28
Identity = 73/173 (42.20%), Postives = 104/173 (60.12%), Query Frame = 0
Query:    6 CSLAVLGQKRALLAAIQPAQYTQPCVLVGGGSMGQHLRHSLDHYRKLFEGVASPSSSTGASSSPTITTIQYDVRDRGTAIESDLAAARREVDRLMTEIQALPDEALTRPVQAAFVLSAGGEQASLPSTLGRELGFCTHHAIHHHALIRVIASALNINAKLPSDFGLAPSTAHY 179
            C LA+L Q +A L ++    YT    LV  GS+GQH RHSLDH RK  E +A+    + ++       ++YD+RDR T +E D  AA +++++L   ++ LP + L RPV AAF+LSA G +    ST GREL F  HH IHH+AL +V+         +P  FG+APSTA++
Sbjct:   34 CVLAILDQHKAFLRSVDDVVYTFHSPLV-EGSLGQHTRHSLDHLRKPLELLAAQQQGSDSN------MVRYDIRDRHTPVEKDRHAAIKQIEQLEKTLRTLPQKDLARPVHAAFMLSADGRELDFQSTFGRELAFAVHHCIHHNALSKVLLRHHFPELSVPDRFGMAPSTANF 199          
BLAST of NO05G04520 vs. NCBI_GenBank
Match: ETP08566.1 (hypothetical protein F441_15452 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 132.5 bits (332), Expect = 1.400e-27
Identity = 73/178 (41.01%), Postives = 107/178 (60.11%), Query Frame = 0
Query:    6 CSLAVLGQKRALLAAIQPAQYTQPCVLVGGGSMGQHLRHSLDHYRKLFEGVASPSSSTGASSSPTITTIQYDVRDRGTAIESDLAAARREVDRLMTEIQALPDEALTRPVQAAFVLSAGGEQASLPSTLGRELGFCTHHAIHHHALIRVIASALNINAKLPSDFGLAPSTAHYQKSNA 184
            C LA+L Q +A L+++  A YT    LV  GS+GQH RHSLDH RK  E +A+    +          ++YD+RDR T +E D  AA +++++L   ++A+P   L RPV AAF+LSA G +    ST  REL F  HH IHH+AL +V+        ++P  FG+APSTA++  +++
Sbjct:   32 CVLAILEQHKAFLSSLDDAVYTFHSPLV-EGSVGQHTRHSLDHLRKPLELLAARQQGSDED------MVRYDIRDRHTPVEKDRHAAIQQIEQLEKTLRAIPQRDLARPVHAAFMLSADGHEFDFESTFSRELAFAVHHCIHHNALSKVLLRHHFPELRVPDGFGMAPSTANFNLAHS 202          
BLAST of NO05G04520 vs. NCBI_GenBank
Match: ETI38658.1 (hypothetical protein F443_15632 [Phytophthora parasitica P1569])

HSP 1 Score: 131.7 bits (330), Expect = 2.500e-27
Identity = 73/178 (41.01%), Postives = 106/178 (59.55%), Query Frame = 0
Query:    6 CSLAVLGQKRALLAAIQPAQYTQPCVLVGGGSMGQHLRHSLDHYRKLFEGVASPSSSTGASSSPTITTIQYDVRDRGTAIESDLAAARREVDRLMTEIQALPDEALTRPVQAAFVLSAGGEQASLPSTLGRELGFCTHHAIHHHALIRVIASALNINAKLPSDFGLAPSTAHYQKSNA 184
            C LA+L Q +A L+++  A YT    LV  GS+GQH RHSLDH RK  E +A+    +          ++YD+RDR T +E D  AA +++++L   ++A+P   L RPV AAF+LSA G +    ST  REL F  HH IHH+AL +V+         +P  FG+APSTA++  +++
Sbjct:   32 CVLAILEQHKAFLSSLDDAVYTFHSPLV-EGSVGQHTRHSLDHLRKPLELLAARQQGSDED------MVRYDIRDRHTPVEKDRHAAIQQIEQLEKTLRAIPQRDLARPVHAAFMLSADGHEFDFESTFSRELAFAVHHCIHHNALSKVLLRHHFPELSVPDGFGMAPSTANFNLAHS 202          
BLAST of NO05G04520 vs. NCBI_GenBank
Match: ETP36606.1 (hypothetical protein F442_15472 [Phytophthora parasitica P10297])

HSP 1 Score: 131.3 bits (329), Expect = 3.200e-27
Identity = 73/173 (42.20%), Postives = 104/173 (60.12%), Query Frame = 0
Query:    6 CSLAVLGQKRALLAAIQPAQYTQPCVLVGGGSMGQHLRHSLDHYRKLFEGVASPSSSTGASSSPTITTIQYDVRDRGTAIESDLAAARREVDRLMTEIQALPDEALTRPVQAAFVLSAGGEQASLPSTLGRELGFCTHHAIHHHALIRVIASALNINAKLPSDFGLAPSTAHY 179
            C LA+L Q +A L+++  A YT    LV  GS+GQH RHSLDH RK  E +A+    +          ++YD+RDR T +E D  AA +++++L   ++A+P   L RPV AAF+LSA G +    ST  REL F  HH IHH+AL +V+        ++P  FG+APSTA++
Sbjct:   32 CVLAILEQHKAFLSSLDDAVYTFHSPLV-EGSVGQHTRHSLDHLRKPLELLAARQQGSDED------MVRYDIRDRHTPVEKDRHAAIQQIEQLEKTLRAIPQRDLARPVHAAFMLSADGHEFDFESTFSRELAFAVHHCIHHNALSKVLLRHHFPELRVPDGFGMAPSTANF 197          
BLAST of NO05G04520 vs. NCBI_GenBank
Match: ETL85550.1 (hypothetical protein L917_14898, partial [Phytophthora parasitica])

HSP 1 Score: 130.6 bits (327), Expect = 5.500e-27
Identity = 73/173 (42.20%), Postives = 103/173 (59.54%), Query Frame = 0
Query:    6 CSLAVLGQKRALLAAIQPAQYTQPCVLVGGGSMGQHLRHSLDHYRKLFEGVASPSSSTGASSSPTITTIQYDVRDRGTAIESDLAAARREVDRLMTEIQALPDEALTRPVQAAFVLSAGGEQASLPSTLGRELGFCTHHAIHHHALIRVIASALNINAKLPSDFGLAPSTAHY 179
            C LA+L Q +A L+++  A YT    LV  GS+GQH RHSLDH RK  E +A+    +          ++YD+RDR T +E D  AA +++++L   ++A+P   L RPV AAF+LSA G +    ST  REL F  HH IHH+AL +V+         +P  FG+APSTA++
Sbjct:    8 CVLAILEQHKAFLSSLDDAVYTFHSPLV-EGSVGQHTRHSLDHLRKPLELLAARQQGSDED------MVRYDIRDRHTPVEKDRHAAIQQIEQLEKTLRAIPQRDLARPVHAAFMLSADGHEFDFESTFSRELAFAVHHCIHHNALSKVLLRHHFPELSVPDGFGMAPSTANF 173          
BLAST of NO05G04520 vs. NCBI_GenBank
Match: XP_008895170.1 (hypothetical protein PPTG_04664 [Phytophthora parasitica INRA-310] >ETN19311.1 hypothetical protein PPTG_04664 [Phytophthora parasitica INRA-310])

HSP 1 Score: 130.6 bits (327), Expect = 5.500e-27
Identity = 72/178 (40.45%), Postives = 107/178 (60.11%), Query Frame = 0
Query:    6 CSLAVLGQKRALLAAIQPAQYTQPCVLVGGGSMGQHLRHSLDHYRKLFEGVASPSSSTGASSSPTITTIQYDVRDRGTAIESDLAAARREVDRLMTEIQALPDEALTRPVQAAFVLSAGGEQASLPSTLGRELGFCTHHAIHHHALIRVIASALNINAKLPSDFGLAPSTAHYQKSNA 184
            C LA+L Q +A L+++  A YT    LV  GS+GQH RHSL+H RK  E +A+    +          ++YD+RDR T +E D  AA +++++L   ++A+P   L RPV AAF+LSA G +    ST  REL F  HH IHH+AL +V+        ++P  FG+APSTA++  +++
Sbjct:   32 CVLAILEQHKAFLSSLDDAVYTFHSPLV-EGSVGQHTRHSLNHLRKPLELLAARQQGSDED------MVRYDIRDRHTPVEKDRHAAIQQIEQLEKTLRAIPQRDLARPVHAAFMLSADGHEFDFESTFSRELAFAVHHCIHHNALSKVLLRHHFPELRVPDGFGMAPSTANFNLAHS 202          
BLAST of NO05G04520 vs. NCBI_GenBank
Match: ETO67422.1 (hypothetical protein F444_15615 [Phytophthora parasitica P1976])

HSP 1 Score: 130.2 bits (326), Expect = 7.200e-27
Identity = 73/173 (42.20%), Postives = 103/173 (59.54%), Query Frame = 0
Query:    6 CSLAVLGQKRALLAAIQPAQYTQPCVLVGGGSMGQHLRHSLDHYRKLFEGVASPSSSTGASSSPTITTIQYDVRDRGTAIESDLAAARREVDRLMTEIQALPDEALTRPVQAAFVLSAGGEQASLPSTLGRELGFCTHHAIHHHALIRVIASALNINAKLPSDFGLAPSTAHY 179
            C LA+L Q +A L+++  A YT    LV  GS+GQH RHSLDH RK  E +A+    +          ++YD+RDR T +E D  AA +++++L   ++A+P   L RPV AAF+LSA G +    ST  REL F  HH IHH+AL +V+         +P  FG+APSTA++
Sbjct:   32 CVLAILEQHKAFLSSLDGAVYTFHSPLV-EGSVGQHTRHSLDHLRKPLELLAARQQGSDED------MVRYDIRDRHTPVEKDRHAAIQQIEQLEKTLRAIPQRDLARPVHAAFMLSADGHEFDFESTFSRELAFAVHHCIHHNALSKVLLRHHFPELSVPDGFGMAPSTANF 197          
BLAST of NO05G04520 vs. NCBI_GenBank
Match: ETL32307.1 (hypothetical protein L916_15068, partial [Phytophthora parasitica])

HSP 1 Score: 129.8 bits (325), Expect = 9.300e-27
Identity = 72/173 (41.62%), Postives = 104/173 (60.12%), Query Frame = 0
Query:    6 CSLAVLGQKRALLAAIQPAQYTQPCVLVGGGSMGQHLRHSLDHYRKLFEGVASPSSSTGASSSPTITTIQYDVRDRGTAIESDLAAARREVDRLMTEIQALPDEALTRPVQAAFVLSAGGEQASLPSTLGRELGFCTHHAIHHHALIRVIASALNINAKLPSDFGLAPSTAHY 179
            C LA+L Q +A L+++  A YT    LV  GS+GQH RHSL+H RK  E +A+    +          ++YD+RDR T +E D  AA +++++L   ++A+P   L RPV AAF+LSA G +    ST  REL F  HH IHH+AL +V+        ++P  FG+APSTA++
Sbjct:   41 CVLAILEQHKAFLSSLDDAVYTFHSPLV-EGSVGQHTRHSLNHLRKPLELLAARQQGSDED------MVRYDIRDRHTPVEKDRHAAIQQIEQLENTLRAIPQRDLARPVHAAFMLSADGHEFDFESTFSRELAFAVHHCIHHNALSKVLLRHHFPELRVPDGFGMAPSTANF 206          
The following BLAST results are available for this feature:
BLAST of NO05G04520 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27956.13.600e-6370.72hypothetical protein Naga_100008g107 [Nannochlorop... [more]
GAX93207.13.800e-2842.37Hypothetical protein PINS_001092 [Pythium insidios... [more]
XP_002905609.18.500e-2842.20conserved hypothetical protein [Phytophthora infes... [more]
ETP08566.11.400e-2741.01hypothetical protein F441_15452 [Phytophthora para... [more]
ETI38658.12.500e-2741.01hypothetical protein F443_15632 [Phytophthora para... [more]
ETP36606.13.200e-2742.20hypothetical protein F442_15472 [Phytophthora para... [more]
ETL85550.15.500e-2742.20hypothetical protein L917_14898, partial [Phytopht... [more]
XP_008895170.15.500e-2740.45hypothetical protein PPTG_04664 [Phytophthora para... [more]
ETO67422.17.200e-2742.20hypothetical protein F444_15615 [Phytophthora para... [more]
ETL32307.19.300e-2741.62hypothetical protein L916_15068, partial [Phytopht... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL085nonsL085Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR117ngnoR117Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003406NSK003406Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G04520.1NO05G04520.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G04520.1NO05G04520.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G04520 ID=NO05G04520|Name=NO05G04520|organism=Nannochloropsis oceanica|type=gene|length=594bp
ATGTCGGTACGATCCTGCAGTTTAGCTGTCCTAGGACAAAAGCGTGCCTT
GCTCGCTGCAATACAACCCGCTCAGTACACGCAGCCCTGTGTATTGGTTG
GAGGTGGAAGCATGGGACAGCATTTACGTCACTCCTTGGATCATTACCGC
AAGTTATTTGAAGGCGTTGCCTCTCCTTCCTCCTCTACTGGAGCCTCCTC
CTCTCCGACCATCACTACCATCCAGTACGACGTCCGGGACCGCGGCACGG
CGATCGAGAGCGACTTAGCTGCTGCACGACGGGAGGTGGACCGACTGATG
ACCGAGATTCAAGCGCTGCCCGACGAGGCGTTGACTCGGCCCGTGCAAGC
CGCGTTTGTTCTATCGGCAGGAGGGGAGCAAGCCTCGTTGCCCTCGACGC
TGGGGAGGGAATTAGGGTTCTGCACCCATCATGCCATACATCATCATGCC
TTGATTAGGGTGATTGCCTCAGCATTGAATATAAATGCCAAATTACCATC
TGATTTTGGATTGGCTCCCTCAACCGCACATTACCAAAAATCGAATGCGC
CTATTCCTCCTCCTACTTCTTCATCCTCTTCCTCCTCTCCGTAG
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protein sequence of NO05G04520.1

>NO05G04520.1-protein ID=NO05G04520.1-protein|Name=NO05G04520.1|organism=Nannochloropsis oceanica|type=polypeptide|length=198bp
MSVRSCSLAVLGQKRALLAAIQPAQYTQPCVLVGGGSMGQHLRHSLDHYR
KLFEGVASPSSSTGASSSPTITTIQYDVRDRGTAIESDLAAARREVDRLM
TEIQALPDEALTRPVQAAFVLSAGGEQASLPSTLGRELGFCTHHAIHHHA
LIRVIASALNINAKLPSDFGLAPSTAHYQKSNAPIPPPTSSSSSSSP*
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Synonyms
Publications