NO05G04030, NO05G04030 (gene) Nannochloropsis oceanica

Overview
NameNO05G04030
Unique NameNO05G04030
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1796
Alignment locationchr5:1038968..1040763 +

Link to JBrowse

Properties
Property NameValue
DescriptionFha domain protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:1038968..1040763 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO:0005488binding
Vocabulary: INTERPRO
TermDefinition
IPR008984SMAD_FHA_domain
IPR033275MARCH-like
IPR000253FHA_dom
IPR011016Znf_RING-CH
Homology
BLAST of NO05G04030 vs. NCBI_GenBank
Match: EWM27996.1 (fha domain protein [Nannochloropsis gaditana])

HSP 1 Score: 649.0 bits (1673), Expect = 1.300e-182
Identity = 348/542 (64.21%), Postives = 391/542 (72.14%), Query Frame = 0
Query:    1 MGLASSTMGAASSSKQDNSSSDLTQQ------DGHI------WGRTSLRVSGGDDGATCVQVKIMPLVPGKANREVKTFKISSNGAVLEGGMTPEIRDIAREYEKMTGEALPRISIDDRRAQQLLVSCVGEDYYVAPAPELFSRHTGTCRVLGDKHQRTTDYRLQVGDFLRIGSVGLIVSELHPGKE-------LGRAAGGDSXXXXXXXXXXXXXXXXXXXXXXXXGXXXXXXXXXXXASGSSGDTTQEGDLGAT--NGGRRPRNPYPNNHSNTST----TNYHSVPLAITEKDLFYLREDVGELRNDLFAQXXXXXXXXXXXXXXXXXLTPGRSPRVIQCYMCFDDEDTVENPLVAPCLCKGGTRYVHLTCLQKWQASAGDDKDCVVATSAELKNTCKICKSKYKTHVRAKDGRLLPLLGHQLPPPFICFLVVTKHDTAEELFNTQFQLSFAENKQILIGRSRTCQMVLDYRTVSTQHATVTFRKGGFYFRDLSSSNGSMLNLRRPMKLPYNQWVRIRYGRSIVAFKAKRSWIRRRLSAM 518
            MG+ASSTMGAASSS QD SS  +  +       GH       W R+SLR++GGDD A  VQVKIMPLVPG A R+VKT KI+S GAVLEG M+PEIR+IAREYE+  G +LPRI IDDRRAQQL+V CVGED+Y+ PAPELFSRHTGTCRVLGDKHQRT DY L+VGDFLRIGSVGLIVSEL PG+E       +G A G                                        +G +G  +++G    +  +GG  P     +    +S+     N  S   +ITEKDLFYLRED GE+R DLFAQ                 L+PGRSPRV  CYMCFDDED+  NPLVAPCLCKGGTRYVHL+CL+ WQASAGD+KDCV+ TSAE+K TCKICK+KYKTHVR  DGRLLPLL H LPPPFICFLVVTKHD AEELFNTQFQLSF+ENKQILIGRSR C MVLDYRTVSTQHATVT+RKGGFYFRDLSSSNGSMLNLRRPMKLPYNQWVRIRYGRSIVAFKA+RSW+R RLS+M
Sbjct:    1 MGVASSTMGAASSSAQDGSSDRMDVEGVSGGSSGHSMAASQRWSRSSLRMTGGDDTAMSVQVKIMPLVPGTATRDVKTCKITSAGAVLEGKMSPEIRNIAREYERAMGHSLPRIPIDDRRAQQLMVVCVGEDFYLVPAPELFSRHTGTCRVLGDKHQRTMDYHLEVGDFLRIGSVGLIVSELDPGQEGEVESQGIGGAGG---------------------------RLTVLRGIEGGRGAGEAGAPSRQGQGPGSLPDGGNLPMMGEEDGRGTSSSGKAGRNRRSSRGSITEKDLFYLREDAGEIRQDLFAQEEAATAVQEGLAATALGLSPGRSPRVALCYMCFDDEDSSSNPLVAPCLCKGGTRYVHLSCLRTWQASAGDEKDCVL-TSAEMKTTCKICKAKYKTHVRTGDGRLLPLLEHHLPPPFICFLVVTKHDAAEELFNTQFQLSFSENKQILIGRSRNCHMVLDYRTVSTQHATVTYRKGGFYFRDLSSSNGSMLNLRRPMKLPYNQWVRIRYGRSIVAFKARRSWMRGRLSSM 514          
BLAST of NO05G04030 vs. NCBI_GenBank
Match: CBJ30649.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 302.4 bits (773), Expect = 2.900e-78
Identity = 185/507 (36.49%), Postives = 250/507 (49.31%), Query Frame = 0
Query:   39 SGGDDGATCVQVKIMPLVPGKAN--REVKTFKISSNGAVLEGGM--TPEIR--------DIAREYEKMTGEALPRISIDDRRAQQLLVSCVGEDYYVAPAPELFSRHTGTCRVLGDK----HQRTTDYRLQVGDFLRIGSVGLIVSELHPGKELGRAAGGDSXXXXXXXXXXXXXXXXXXXXXXXXGXXXXXXXXXXXASGSSGDTTQEGDLGATNGGRRPRNPYPNNHSNTSTTNYHSVPLAITEKDLFYLREDVGELRNDLFAQXXXXXXXXXXXXXXXXXLTPGRSPRVI---QCYMCFDDEDTVENPLVAPCLCKGGTRYVHLTCLQKWQASAGDDKDCVVATSAELKNTCKICKSKYKTHVRAKDGRLLPLLGHQLPPPFICFLVVTKHDTAEELFNTQFQLSF---------AENKQILIGRSRTCQMVLDYRTVSTQHATVTFRKGGFYFRDLSSSNGSMLNLRRPMKLPYNQWVRIRYGRSIVAFKAKRSWIRRRLSAM 518
            SGGD     V+V +    PG      ++  ++ISS G  + G +  T E R        DIA EYEK  G  + R  I D RA+QLLV    + +    APE FSRH+GTC +LG +    +  +  Y L++G+FLRIGSVG++VSE+H G      AGG+                                                                                  ++ ++L  L+ D+  ++ DL                    +       V+    CYMCFDD D   NPLVAPC CKG TRYVHL CLQKW  +  ++K CVV  +  ++  C +CKS YK  VR   G  + L    LPPP+ICF+VVT+H   EELF+T++QLSF         A  K++++GRSR C MVLDYRTVST+HA V F+ G FYF DL SSNGS L LR P++LPY + V +++G ++V+ KAKRS IR RLS++
Sbjct:  198 SGGDHKGAHVEVSVFKYQPGVQTPVEQLHNYRISSRGGAITGSLTQTEERRGENVSGSVDIAAEYEKRKGSQVVRHHIKDHRAKQLLVVPNDDKFVAVAAPEAFSRHSGTCMILGGQGAYGNGTSKSYELKLGNFLRIGSVGVVVSEIHTG------AGGEHK-------------------------------------------------------------------------------CLSWEELTCLKGDIAAIQKDLVTIEALTAQEENAEADKLTGVLQNGGGGVVNTRMCYMCFDDVDEPGNPLVAPCECKGDTRYVHLNCLQKWHTTTSENKVCVVLNNKGVR-VCTVCKSPYKASVRLPGGESISLFQSPLPPPYICFMVVTRHQNNEELFSTKYQLSFNSVMNRGGTASTKELVVGRSRQCDMVLDYRTVSTRHANVRFQGGRFYFSDLMSSNGSYLYLREPLQLPYGETVFLKWGSNVVSLKAKRSSIRHRLSSL 618          
BLAST of NO05G04030 vs. NCBI_GenBank
Match: GAX20088.1 (hypothetical protein FisN_18Lh026 [Fistulifera solaris])

HSP 1 Score: 280.0 bits (715), Expect = 1.500e-71
Identity = 170/484 (35.12%), Postives = 236/484 (48.76%), Query Frame = 0
Query:   46 TCVQVKIMPLVPGKANREVK--TFKISSNGAVLEGGMTPEIR-DIAREYEKMTGEALPRISIDDRRAQQLLVSCVGEDYYVAPAPELFSRHTGTCRVLGDKHQRTTDYRLQVGDFLRIGSVGLIVSELHPGKELGRAAGGDSXXXXXXXXXXXXXXXXXXXXXXXXGXXXXXXXXXXXASGSSGDTTQEGDLGATNGGRRPRNPYPNNHSNTSTTNYHSVPLAITEKDLFYLREDVGELRNDLFAQXXXXXXXXXXXXXXXXXLTPGRSPRVIQCYMCFDDEDTVENPLVAPCLCKGGTRYVHLTCLQKWQASAGDDKDCVVATSAELKNTCKICKSKYKTHVRAKDGRLLPLLGHQLPPPFICFLVVTKHDTAEELFNTQFQLSFA---------ENKQILIGRSRTCQMVLDYRTVSTQHATVTFRKGGFYFRDLSSSNGSMLNLRRPMKLPYNQWVRIRYGRSIVAFKAKRSWIRRRLSAM 518
            T V+VK+ P    +A  + K  +F I   G +++G        D+  EY +  G  L R  + D RA QLLV+  G+ ++V PAPE FSRH+GTCR+LGD+      + LQVGDFLR+GSVG++V E H G E                                              + + G+ + +   G TN    P    PNN S                             + DL                       G +P    CYMCFD+EDT ENP++ PC C G T+YVH+ CL+KW  +  D++ C +++   +  TC +CKS +K+  + KDGR + L    L PP+I  LV TKH+ A+ LFNT+FQLSF+           + +L+GRS    MVLDYRTVS +HA + F+ G F F D  SSNGS L LRRP++L  +Q V+ R GRS+++ K    W RR L A+
Sbjct:   86 TQVEVKVYPCNNSQAGGKKKFTSFTIKPEGVIIQGSNRNRSGVDLGTEYAQYVGRKLQRYELSDTRACQLLVTTHGKSFWVVPAPEAFSRHSGTCRLLGDRKHPPASHTLQVGDFLRVGSVGVVVIETHDGLE---------------------NKVLSEEKIQKIMKDTTNSNGFLDLAETDGENSDDSSDGETN----PHGKLPNNSS-----------------------------KGDL-----------------------GENP---VCYMCFDEEDTDENPMITPCKCSGDTKYVHVECLRKWHTAEADNQICFLSS---VDATCSVCKSSFKSDFKLKDGRQVKLFKSSLEPPYISLLVATKHEMAQRLFNTRFQLSFSTLMKPDGRNATRPLLLGRSSGSDMVLDYRTVSARHAAIRFKNGEFIFTDAGSSNGSYLYLRRPLELSPSQPVQFRLGRSMISMKVTNKWNRRLLRAV 486          
BLAST of NO05G04030 vs. NCBI_GenBank
Match: GAX17826.1 (hypothetical protein FisN_18Hh026 [Fistulifera solaris])

HSP 1 Score: 279.6 bits (714), Expect = 2.000e-71
Identity = 169/484 (34.92%), Postives = 238/484 (49.17%), Query Frame = 0
Query:   46 TCVQVKIMPLVPGKANREVK--TFKISSNGAVLEGGMTPEIR-DIAREYEKMTGEALPRISIDDRRAQQLLVSCVGEDYYVAPAPELFSRHTGTCRVLGDKHQRTTDYRLQVGDFLRIGSVGLIVSELHPGKELGRAAGGDSXXXXXXXXXXXXXXXXXXXXXXXXGXXXXXXXXXXXASGSSGDTTQEGDLGATNGGRRPRNPYPNNHSNTSTTNYHSVPLAITEKDLFYLREDVGELRNDLFAQXXXXXXXXXXXXXXXXXLTPGRSPRVIQCYMCFDDEDTVENPLVAPCLCKGGTRYVHLTCLQKWQASAGDDKDCVVATSAELKNTCKICKSKYKTHVRAKDGRLLPLLGHQLPPPFICFLVVTKHDTAEELFNTQFQLSFA---------ENKQILIGRSRTCQMVLDYRTVSTQHATVTFRKGGFYFRDLSSSNGSMLNLRRPMKLPYNQWVRIRYGRSIVAFKAKRSWIRRRLSAM 518
            T V+VK+ P    +A  + K  +F I   G +++G        D+  EY +  G  L R  + D RA QLLV+  G+ ++V PAPE FSRH+GTCR+LGD+      + LQVGDFLR+GSVG++V E H G E                                              + + G+ + +   G TN    P+   P+N+S                             + DL                       G +P    CYMCFD+EDT ENP++ PC C G T+YVH+ CL+KW  +  D++ C +++   +  TC +CKS +K+  + KDGR + L    L PP+I  LV TKH+ A+ LFNT+FQLSF+           + +L+GRS    MVLDYRTVS +HA + F+ G F F D  SSNGS L LRRP++L  +Q V+ R GRS+++ K    W RR L A+
Sbjct:   85 TQVEVKVYPCNNSQAGGKKKFTSFTIKPEGVIIQGSNRHRSGVDLGAEYAQHVGRKLQRYELSDTRACQLLVTTHGKSFWVVPAPEAFSRHSGTCRLLGDRKHPPASHTLQVGDFLRVGSVGVVVIETHDGVE---------------------NKVLSEEKIQKIMKDTTNSNGFLDLAETDGENSDDSSDGETN----PQGKLPHNNS-----------------------------KGDL-----------------------GENP---VCYMCFDEEDTDENPMITPCKCSGDTKYVHVECLRKWHTAEADNQICFLSS---VDATCSVCKSSFKSDFKLKDGRQVKLFKSSLEPPYISLLVATKHEMAQRLFNTRFQLSFSTLMKPDGRNATRPLLLGRSSGSDMVLDYRTVSARHAAIRFKNGEFIFTDAGSSNGSYLYLRRPLELSLSQPVQFRLGRSMISMKVTNKWNRRLLRAV 485          
BLAST of NO05G04030 vs. NCBI_GenBank
Match: OEU16348.1 (hypothetical protein FRACYDRAFT_169414 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 250.0 bits (637), Expect = 1.700e-62
Identity = 153/434 (35.25%), Postives = 209/434 (48.16%), Query Frame = 0
Query:   96 GEALPRISIDDRRAQQLLVSCVGEDYYVAPAPELFSRHTGTCRVLGDKHQRTTDYRLQVGDFLRIGSVGLIVSELHPGKELGRAAGGDSXXXXXXXXXXXXXXXXXXXXXXXXGXXXXXXXXXXXASGSSGDTTQEGDLGATNGGRRPRNPYPNNHSNTSTTNYHSVPLAITEKDLFYLREDVGELRNDLFAQXXXXXXXXXXXXXXXXXLTPGRSPRVIQ---CYMCFDDEDTVENPLVAPCLCKGGTRYVHLTCLQKWQASAGDDKDCVVATSAELKNTCKICKSKYKTHVRAKDGRLLPLLGHQLPPPFICFLVVTKHDTAEELFNTQFQLSFA---------ENKQILIGRSRTCQMVLDYRTVSTQHATVTFRKGGFYFRDLSSSNGSMLNLRRPMKLPYNQWVRIRYGRSIVAFKAKRSWIRRRLSAM 518
            G  L R  + D RA QLLV+   + ++V PAPE FSRH+GTCR+LGD+      + LQVGDFLR+GSVG++V E H G E                                                                  R  +          TTN ++  L + E D        GE  +D                        GRS  V     CYMCFD+EDT  NPL+ PC C G T +VH+ CL+KW  +  D++ C +++   +  TC +C+S +K+  + KDGR + L    L PP++  LV TKH+ A+ LFNT+FQLSF+           + +L+GRS    MVLDYRTVS +HA++ F+ G F F D  SSNGS L LRRP++L  +Q V+ R GRS+++ K    W RR L A+
Sbjct:    4 GRKLQRYELSDTRACQLLVTTHAKSFWVVPAPEAFSRHSGTCRLLGDRKHPPAPHTLQVGDFLRVGSVGVVVIETHNGIE-----------------------------------------------------------------NRVLSEEKIQKIMKDTTNSNAGFLDLAETD--------GENSDDSLEGDTERAG------------ASGRSGMVGDKPICYMCFDEEDTEANPLITPCKCIGDTAHVHVECLRKWHTAEADNQVCFLSS---VDATCSVCRSTFKSDFKLKDGRQMKLFKSSLEPPYVSLLVATKHEMAQRLFNTRFQLSFSTLMKADGKNATRPLLLGRSSGSDMVLDYRTVSARHASIRFKNGEFIFTDAGSSNGSYLYLRRPLELSPSQSVQFRLGRSMISMKVVNKWNRRLLRAV 349          
BLAST of NO05G04030 vs. NCBI_GenBank
Match: EWM26608.1 (fha domain protein [Nannochloropsis gaditana])

HSP 1 Score: 241.1 bits (614), Expect = 7.900e-60
Identity = 148/460 (32.17%), Postives = 231/460 (50.22%), Query Frame = 0
Query:   62 REVKTFKISSNGAVLEGGMTPEI---RDIAREYEKMTGEALPRISIDDRRAQQLLVSCVGEDYYVAPAPELFSRHTGTCRVLGDKHQRTTDYRLQVGDFLRIGSVGLIVSELHPGKELGRAAGGDSXXXXXXXXXXXXXXXXXXXXXXXXGXXXXXXXXXXXASGSSGDTTQEGDLGATNGGRRPRNPYPNNHSNTSTTNYHSVPLAITEKDLFYLREDVGELRNDLFAQXXXXXXXXXXXXXXXXXLTPGRSPRVIQCYMCFDDEDTVENPLVAPCLCKGGTRYVHLTCLQKWQASAGDDKDCVVATSAELKNTCKICKSKYKTHVRAKDGRLLPLLGHQLPPPFICFLVVTKHDTAEELFNTQFQLSFAENKQILIGRSRTCQMVLDYRTVSTQHATVTFRKGGFYFRDLSSSNGSMLNLRRPMKLPYNQWVRIRYGRSIVAFKAKRSWIRRRLSAMP 519
            + V  F++ ++G V EG     I    D+++ YE + G  + R+++ D+RAQQ+LV+     ++  P+ + FSRH G   VLGDK  R   + L+VGD LR+GSVGL+VSE+    + G++                                     XXXX                        +       + S++          +  L     D GE  N  +                             QCY+C D E+   + L+APC CKG T  VH+ CLQ+  ++    K   V ++     TCKICK++YKTHV   DG LLPLL   L PP++  +V+T+H++  +LFNT FQLSFA   ++ +GRS+ C +V+ YRTVST+HAT+++ KG FY++D  SSNGS+L LR P+++P ++ +R+R GRS+++ + + +    +LS++P
Sbjct:   97 KRVSKFRVFADGVVFEGPEAMAIGDTHDLSKGYECVMGRPVTRVTVGDKRAQQVLVAFADNKFWAVPSRQGFSRHLGVSLVLGDKTARGPKHTLRVGDILRLGSVGLLVSEMRTEADGGKSRTVSQEVLEQIREDVQTAPRQVLAPLRKDFFMGNSVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNDTGTEHSVSSSGSAGHQSRSLKGGLAGPEADSGEGGNGRY-----------------------------QCYICMDSEEEDGDVLIAPCQCKGSTALVHVKCLQRLLSTGDAAKRTSVTSTKHQNYTCKICKARYKTHVCLPDGSLLPLLNPTLMPPYLTLVVITRHESHPDLFNTIFQLSFARAAELSMGRSQGCDVVIGYRTVSTRHATISYSKGEFYYQDARSSNGSLLYLRGPLEIPTSRSIRLRMGRSVLSLRGRHA---LQLSSLP 524          
BLAST of NO05G04030 vs. NCBI_GenBank
Match: XP_005856390.1 (fha domain protein, partial [Nannochloropsis gaditana CCMP526] >EKU19977.1 fha domain protein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 240.4 bits (612), Expect = 1.300e-59
Identity = 148/460 (32.17%), Postives = 231/460 (50.22%), Query Frame = 0
Query:   62 REVKTFKISSNGAVLEGGMTPEI---RDIAREYEKMTGEALPRISIDDRRAQQLLVSCVGEDYYVAPAPELFSRHTGTCRVLGDKHQRTTDYRLQVGDFLRIGSVGLIVSELHPGKELGRAAGGDSXXXXXXXXXXXXXXXXXXXXXXXXGXXXXXXXXXXXASGSSGDTTQEGDLGATNGGRRPRNPYPNNHSNTSTTNYHSVPLAITEKDLFYLREDVGELRNDLFAQXXXXXXXXXXXXXXXXXLTPGRSPRVIQCYMCFDDEDTVENPLVAPCLCKGGTRYVHLTCLQKWQASAGDDKDCVVATSAELKNTCKICKSKYKTHVRAKDGRLLPLLGHQLPPPFICFLVVTKHDTAEELFNTQFQLSFAENKQILIGRSRTCQMVLDYRTVSTQHATVTFRKGGFYFRDLSSSNGSMLNLRRPMKLPYNQWVRIRYGRSIVAFKAKRSWIRRRLSAMP 519
            + V  F++ ++G V EG     I    D+++ YE + G  + R+++ D+RAQQ+LV+     ++  P+ + FSRH G   VLGDK  R   + L+VGD LR+GSVGL+VSE+    + G++                                     XXXX                        +       + S++          +  L     D GE  N  +                             QCY+C D E+   + L+APC CKG T  VH+ CLQ+  ++    K   V ++     TCKICK++YKTHV   DG LLPLL   L PP++  +V+T+H++  +LFNT FQLSFA   ++ +GRS+ C +V+ YRTVST+HAT+++ KG FY++D  SSNGS+L LR P+++P ++ +R+R GRS+++ + + +    +LS++P
Sbjct:   97 KRVSKFRVFADGVVFEGPEAMAIGDTHDLSKGYECVMGRPVTRVTVGDKRAQQVLVAFADNKFWAVPSRQGFSRHLGVSLVLGDKTARGPKHTLRVGDILRLGSVGLLVSEMRTEADGGKSRTVSQEVLEQIREDVQTAPRQVLAPLRKDFFMGNSVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNDTGTEHSVSSSGSAGHQSRSLKGGLAGPEADSGEGGNCRY-----------------------------QCYICMDSEEEDGDVLIAPCQCKGSTALVHVKCLQRLLSTGDAAKRTSVTSTKHQNYTCKICKARYKTHVCLPDGTLLPLLNPTLMPPYLTLVVITRHESHPDLFNTIFQLSFARAAELSMGRSQGCDVVIGYRTVSTRHATISYSKGEFYYQDARSSNGSLLYLRGPLEIPTSRSIRLRMGRSVLSLRGRHA---LQLSSLP 524          
BLAST of NO05G04030 vs. NCBI_GenBank
Match: GAY02690.1 (Hypothetical protein PINS_010528 [Pythium insidiosum])

HSP 1 Score: 208.0 bits (528), Expect = 7.400e-50
Identity = 156/470 (33.19%), Postives = 215/470 (45.74%), Query Frame = 0
Query:   62 REVKTFKISSNGAVLEGGMTPEIRDIAREYEKMTGEALPRISIDDRRAQQLLV---SCVGEDYYVAPAPELFSRHTGTCRVLGDKHQRTTDYRLQVGDFLRIGSVGLIVSELH-PGKELG-RAAGGDSXXXXXXXXXXXXXXXXXXXXXXXXGXXXXXXXXXXXASGSSGDTTQEGDLGATNGGRRPRNPYPNNHSNTSTTNYHSVPLAITEKDLFYLREDVGELRNDLFAQXXXXXXXXXXXXXXXXXLTPGRSPRVIQCYMCFD-DEDTVENPLVAPCLCKGGTRYVHLTCLQKWQASAGDD------KDCVVATSAELKNTCKICKSKYKTHVRAKDGRLLPLLGHQLPPPFICFLVVTKHDT---AEELFNTQFQLSFAE-------NKQILIGRSRTCQMVLDYRTVSTQHATVTFRKGGFYFRDLSSSNGSMLNLRRPMKLPYNQWVRIRYGRSIVAFKAKRSW 510
            RE  +   +SN    +G     + D A          +    ++D RA  L +   + VG+ +    + E FS HTG CRVLG K      +RLQ+GD LRIGSVGL+V EL+   +E G      D                         G         XX                     RP        S+   +   +      E DL +    VG+      AQ                 L  GR  R   CY+C+D DE+   NPLVAPC CKG T++VHL CLQ+W  +   D      K C V T+ +  + C ICK+ Y T VR +DGR++ L+  +LPPP++ F VVT+H+T   +  L NT+FQLSFA         + + IGRS T  M L YRTVS  HA + F    F+  D SSSNG+ML L +P++L +N+ V ++ GR+I+  K K+ W
Sbjct:  130 REFPSVHHASNSNNQDGEELATVGDAAAATLASNAVPMKDCVLNDSRATTLAIKYDNSVGK-FVCGSSIERFSGHTGVCRVLGSKKYPVIPHRLQIGDLLRIGSVGLVVCELNRTTQEDGLETLTEDEYQYIKENYLSVPLQQTFRPTDPRSGQPLHGSNNQXXXXXXXXXXXXXXXXXXXXXXXRPXKLRSGETSDEGESEEDAAXRLADEDDLXHDHASVGDGGARRRAQ------------RLKDGLANGREKRF--CYICYDGDEEPDTNPLVAPCNCKGDTKFVHLECLQRWNNNLDADGSNPNHKMCAV-TNTDGLDVCSICKATYLTSVRLEDGRVVSLMAKKLPPPYVTFAVVTQHETRSRSTALTNTRFQLSFANISSLPRGQQFLTIGRSTTNNMTLRYRTVSQLHAKIKFEDNEFHLHDASSSNGTMLFLSKPVELEWNKVVHVKIGRTILTLKPKKRW 583          
BLAST of NO05G04030 vs. NCBI_GenBank
Match: CCA18878.1 (conserved hypothetical protein [Albugo laibachii Nc14])

HSP 1 Score: 205.7 bits (522), Expect = 3.700e-49
Identity = 133/475 (28.00%), Postives = 217/475 (45.68%), Query Frame = 0
Query:   41 GDDGATCVQVK-IMPLVPGKANREVKTFK-ISSNGAVLEGGMTPEIRDIAREYEKMTGEALPRISIDDRRAQQLLVSCVGEDYYVAPAPELFSRHTGTCRVLGDKHQRTTDYRLQVGDFLRIGSVGLIVSELHPGKELGRAAGGDSXXXXXXXXXXXXXXXXXXXXXXXXGXXXXXXXXXXXASGSSGDTTQEGDLGATNGGRRPRNPYPNNHSNTSTTNYHSVPLAITEKDLFYLREDVGELRNDLFAQXXXXXXXXXXXXXXXXXLTPGRSPRVIQCYMCFDDEDTVENPLVAPCLCKGGTRYVHLTCLQKWQASAGDDKDCVVATSAELKNTCKICKSKYKTHVRAKDGRLLPLLGHQLPPPFICFLVVTKHDTAEELFNTQFQLSFAE------NKQILIGRSRTCQMVLDYRTVSTQHATVTFRKGGFYFRDLSSSNGSMLNLRRPMKLPYNQWVRIRYGRSIVAFKAKR 508
            GD  A  ++++ I  +  G   +  K  + +S +G  + G    +  D+      +      RI I+D RA  L +    E Y + P+ E FS HTG C++LG K  R   +R++VGD +R GSVGL+V+E+                                                        DT  +G               PN+ + +S    + +   I  + L     D G   +D                         R      CY+C+D+ +  +NPL+APC C G T+Y+HL CL++W  +   ++ C V   +  + TC ICK+ Y +  + +DGR++ LL  +LP P I F VVTKH ++    +T++QLS+        ++ +++GRS  C +VL YRTVST HA + + KG FY +D  SSNG++  + RP++L  NQ + I++GR++++ K  +
Sbjct:   20 GDGKADMLEIRAITAITKGSTGKRDKFRRTVSKSGVAIYGPKHAQSSDV------IATSTRERIYIEDPRAPCLNIDYSNETYSLLPSSEKFSAHTGICQILGTKSIRGGKHRIRVGDIIRFGSVGLLVTEI--------------------------------------------------------DTAGQG---------------PNDATLSSLETANLIQRVICHETLSGADVDSGLDTDDDVGDISGNDESKAVQSQSF------RQSSYAVCYVCYDESEN-DNPLIAPCKCTGDTKYIHLNCLKRWNTNGEKNEVCAVLDESNAR-TCSICKAPYPSKTKVEDGRMVSLLPDRLPTPSIMFQVVTKHSSSTLNLSTRYQLSYKTLLENDIHRPLMVGRSSQCDLVLKYRTVSTIHAEIHYSKGEFYLKDAGSSNGTLRYIYRPLQLQSNQSIHIKFGRTVLSVKPSK 409          
BLAST of NO05G04030 vs. NCBI_GenBank
Match: CCI41142.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 201.4 bits (511), Expect = 6.900e-48
Identity = 144/434 (33.18%), Postives = 210/434 (48.39%), Query Frame = 0
Query:  104 IDDRRAQQLLV---SCVGEDYYVAPAPELFSRHTGTCRVLGDKHQRTTDYRLQVGDFLRIGSVGLIVSELHPGKELGRAAGGDSXXXXXXXXXXXXXXXXXXXXXXXXGXXXXXXXXXXXASGSSGDTT-QEGDL-GATNGGRRPRNPYPNNHSNTSTTNYHSVP-LAITEKDLFY---LREDVGELRNDLFAQXXXXXXXXXXXXXXXXXLTPGRSPRVIQ-----CYMCFD-DEDTVENPLVAPCLCKGGTRYVHLTCLQKWQASAGDD--------KDCVVATSAELKNTCKICKSKYKTHVRAKDGRLLPLLGHQLPPPFICFLVVTKHDTAEE---LFNTQFQLSFA----ENKQILIGRSRTCQMVLDYRTVSTQHATVTFRKGGFYFRDLSSSNGSMLNLRRPMKLPYNQWVRIRYGRSIVAFKAKR 508
            +DD RA  L V     VG+ +    + E FS HTG C+VLG K      +RL++GD +RIGSVGL+V+EL+  +E       +S                        G           +  SS +    EGD  G      R R    N+  N         P    T  +  Y   +R +  E+ +D  +                   T   +P  +      CY+C+D D D   NPLVAPC C+G T+Y+HL CL++W  +  ++        + CVV T+ +  + C ICK+ Y    R +DGR++ LL  +L PPF+ F VVT H+       L NT+FQLSFA      +++ IGRS +  M++ YRTVS  HA V+F++  FY  D SSSNG+ML L RPM+L +N+   ++ GR+I+  +AK+
Sbjct:  159 LDDTRASSLDVCYDDAVGK-FVCGASIERFSGHTGVCKVLGSKRYTPVQHRLRLGDLIRIGSVGLVVTELNRSEE---DENTESLTPHDLEILKARFLSVPLQQTFNTGLSMEQAKEESDSGRSSEECDFNEGDCEGQKQENERERMEGRNSEENDECNELKLQPGNGETSDEGDYEDAVRVESIEIDDDPSSFVQVCDRDACSLIHPNSRRTSTHAPHDVSRLKRFCYICYDEDADVQNNPLVAPCACRGDTKYLHLKCLKRWNHNLNEEGHDPNPQRRMCVV-TNLDGLHLCTICKTPYALSARLEDGRVISLLPDKLKPPFVTFAVVTPHEARSRVNVLTNTRFQLSFAGLPSNQQELTIGRSTSNHMMVRYRTVSQLHAKVSFKENEFYLNDASSSNGTMLFLSRPMELEWNEPTHVKIGRTILTMRAKK 587          
The following BLAST results are available for this feature:
BLAST of NO05G04030 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27996.11.300e-18264.21fha domain protein [Nannochloropsis gaditana][more]
CBJ30649.12.900e-7836.49conserved unknown protein [Ectocarpus siliculosus][more]
GAX20088.11.500e-7135.12hypothetical protein FisN_18Lh026 [Fistulifera sol... [more]
GAX17826.12.000e-7134.92hypothetical protein FisN_18Hh026 [Fistulifera sol... [more]
OEU16348.11.700e-6235.25hypothetical protein FRACYDRAFT_169414 [Fragilario... [more]
EWM26608.17.900e-6032.17fha domain protein [Nannochloropsis gaditana][more]
XP_005856390.11.300e-5932.17fha domain protein, partial [Nannochloropsis gadit... [more]
GAY02690.17.400e-5033.19Hypothetical protein PINS_010528 [Pythium insidios... [more]
CCA18878.13.700e-4928.00conserved hypothetical protein [Albugo laibachii N... [more]
CCI41142.16.900e-4833.18unnamed protein product [Albugo candida][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL085nonsL085Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR120ngnoR120Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR117ngnoR117Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003457NSK003457Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G04030.1NO05G04030.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|526434gene_3213Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100008g49gene2563Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G04030.1NO05G04030.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G04030 ID=NO05G04030|Name=NO05G04030|organism=Nannochloropsis oceanica|type=gene|length=1796bp
ATGGGGTTGGCCTCGAGCACCATGGGGGCGGCAAGCAGCAGCAAGCAAGA
TAATTCATCCTCAGATCTCACGCAGCAAGATGGACACATCTGGGGTCGGA
CAAGTCTTCGCGTGAGCGGGGGGGATGATGGGGCGACCTGgtacgttttg
ctctatgaagagtagagaggagtatgagaaactaaatggaccgtggaagc
aagagagggctgtgaaacagcttaatatctaaaaagcacatctccaaacc
caaaatagtacaattattcgcgtcctatccctttcccctttcccaaccca
acagCGTCCAAGTTAAAATCATGCCCCTTGTCCCCGGCAAAGCCAATCGG
GAAGTCAAAACGTTCAAAATCTCCTCCAATGGAGCCGTGCTCGAAGGTGG
AATGACTCCCGAAATCCGAGATATTGCTCGTGAATACGAAAAGATGACTG
GGGAAGCCCTCCCGCGCATTTCAATCGACGATCGTCGCGCTCAGCAACTC
CTCGTCTCGTGTGTCGGCGAAGACTACTACGTAGCGCCTGCACCAGAGCT
TTTTTCGAGACACACAGGCACGTGTCGTGTCCTTGGCGATAAGCATCAGC
GGACAACAGACTATCGGTTACAGGTGGGGGATTTCCTTCGCATTGGCTCT
GTGGGGTTGATCGTGTCCGAGCTGCACCCGGGGAAGGAATTGGGGCGTGC
GGCTGGTGGTGATAGCAGCGACAGCGGCAGCAGCAGCGGCAACTGTAGAA
CTAATAATGGTACTAGAATGATGCAGGAAAGTAGCATGGGTACAAGTCAC
GCTGCGAGCAACAGACGGGGCAACGCTAGCGGCAGCAGCGGGGACACTAC
CCAGGAAGGCGACTTGGGAGCCACCAACGGAGGAAGGCGGCCACGCAACC
CTTACCCCAACAACCACAGCAACACTTCCACGACCAACTACCACTCCGTC
CCATTGGCAATTACGGAAAAAGATCTATTCTACCTCCGAGAGGACGTGGG
CGAGCTGCGTAACGATCTTTTCGCACAGCAAGAGGCCGCCACCGCCGCCG
AAGAAGGGCTAGCCGCCGCTGCTGGTGGACTGACTCCGGGCCGCTCCCCC
CGGGTCATTCAATGCTACATGTGCTTCGATGATGAAGACACTGTAGAAAA
TCCTCTGGTCGCGCCCTGCCTCTGCAAAGGCGGGACTCGCTATGTCCACC
TTACCTGCCTCCAAAAGTGGCAAGCATCTGCAGGGGACGACAAGGACTGT
GTCGTCGCCACCAGCGCCGAATTAAAAAACACCTGCAAAATCTGCAAATC
CAAGTACAAGACACACGTTCGTGCCAAGGACGGGCGGCTTCTTCCCCTTT
TGGGACACCAGCTCCCTCCTCCCTTCATTTGTTTCTTGGTCGTGACGAAG
CACGACACGGCGGAGGAACTGTTCAACACCCAGTTCCAATTATCGTTTGC
GGAGAACAAGCAGATTTTGATTGGCCGGTCGAGGACTTGTCAGATGGTGT
TGGATTACCGGACGGTGTCCACTCAGCACGCTACTGTGACTTTTCGCAAG
GGAGGCTTTTACTTCAGGGATCTAAGCAGTAGTAACGGCTCGATGCTCAA
CTTGAGGAGGCCAATGAAATTGCCTTACAATCAATGGGTTCGAATCAGGT
ATGGACGATCGATCGTGGCATTCAAAGCAAAAAGGAGCTGGATTAGGAGG
AGGCTCTCGGCGATGCCCCCTGCTGGTACTGCTGCTGGAGGAGAAGGAGG
GGGAGGGGGGGAGGGGGGGGGGGAAGTGGCCGTTTGGCGGCGATAG
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protein sequence of NO05G04030.1

>NO05G04030.1-protein ID=NO05G04030.1-protein|Name=NO05G04030.1|organism=Nannochloropsis oceanica|type=polypeptide|length=544bp
MGLASSTMGAASSSKQDNSSSDLTQQDGHIWGRTSLRVSGGDDGATCVQV
KIMPLVPGKANREVKTFKISSNGAVLEGGMTPEIRDIAREYEKMTGEALP
RISIDDRRAQQLLVSCVGEDYYVAPAPELFSRHTGTCRVLGDKHQRTTDY
RLQVGDFLRIGSVGLIVSELHPGKELGRAAGGDSSDSGSSSGNCRTNNGT
RMMQESSMGTSHAASNRRGNASGSSGDTTQEGDLGATNGGRRPRNPYPNN
HSNTSTTNYHSVPLAITEKDLFYLREDVGELRNDLFAQQEAATAAEEGLA
AAAGGLTPGRSPRVIQCYMCFDDEDTVENPLVAPCLCKGGTRYVHLTCLQ
KWQASAGDDKDCVVATSAELKNTCKICKSKYKTHVRAKDGRLLPLLGHQL
PPPFICFLVVTKHDTAEELFNTQFQLSFAENKQILIGRSRTCQMVLDYRT
VSTQHATVTFRKGGFYFRDLSSSNGSMLNLRRPMKLPYNQWVRIRYGRSI
VAFKAKRSWIRRRLSAMPPAGTAAGGEGGGGGEGGGEVAVWRR*
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Synonyms
Publications