NO05G03920, NO05G03920 (gene) Nannochloropsis oceanica

Overview
NameNO05G03920
Unique NameNO05G03920
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1359
Alignment locationchr5:1013554..1014912 +

Link to JBrowse

Properties
Property NameValue
DescriptionEukaryotic translation initiation factor 5
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:1013554..1014912 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0003743translation initiation factor activity
GO:0005515protein binding
GO:0008135translation factor activity, RNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006413translational initiation
Vocabulary: INTERPRO
TermDefinition
IPR016189Transl_init_fac_IF2/IF5_N
IPR016190Transl_init_fac_IF2/IF5_Zn-bd
IPR016024ARM-type_fold
IPR002735Transl_init_fac_IF2/IF5
IPR003307W2_domain
Homology
BLAST of NO05G03920 vs. NCBI_GenBank
Match: XP_002288103.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED95546.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 245.7 bits (626), Expect = 2.700e-61
Identity = 220/431 (51.04%), Postives = 275/431 (63.81%), Query Frame = 0
Query:    1 MNIAGLNPIEDANYRYKMPRILAKVEGRGNGIKTVVINMKDVASALHRMPAEVTKFFGTELGAQTTYREETERAVVNGAHSAPALQALLCRYIQGFVLCPSCGLPETAYKIKGGVIYQKCDACGEKSMCDMSHKLTTFIINTHKKASKDGKSVKEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGELVATMDNLAVEDATAFAAAVGRLEQFLSAHPEATAAQVLDEVRMIATFSALSIEDRLFLFVQAAFGPDAAKQNMVGKHVKVLKGLILNVDAEAYQRRLIGVIEHLCAVTHKETLLKMFPLLLKQLYDEEVVDEEVFLEWAEEEGPTEFTRREVSEEMVEMLRGEAEKFVTWLKE 432
            +NI+G  P++D  YRYKMP +  K+EG+GNGIKTV+ N+ DV  +LHR   EV KFFG ELGAQTTY  ET+RAVVNGAH+   LQ ++ +YI+ FVLCP+C LPET YKIK G+IY KC ACG K   DM+HKL T+I+   KKA +D K                                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     T ++  V+DA A A AV  +++FL+ +P+A+ + + ++V      S L  +D++ +FVQ+ F PD  KQ  V KH   +    +       +R LI   E LC    K+     F ++LKQL+DEEV++E+  LEWA  EG T++T   V E+    LRGEAE  V WL+E
Sbjct:    8 VNISGTTPVDDPEYRYKMPTVYGKIEGKGNGIKTVIPNISDVGLSLHRDAGEVNKFFGCELGAQTTYNTETDRAVVNGAHTDQVLQQMVHKYIELFVLCPNCRLPETEYKIKSGMIYHKCAACGNKDAVDMTHKLCTYILAQDKKAKQDAKK-----------------------------------SGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTEEH--VDDANAMALAVEAMKKFLADNPDASPSAIAEKVVNEQMASGLKSQDKIHIFVQSVFTPDFYKQKQVEKHAPAIAK--ITQGKNVMERHLIASFEGLCVDEPKK-----FAVVLKQLFDEEVLEEDTILEWA-GEGRTDYTLESVDEDQRAALRGEAEPVVVWLQE 393          
BLAST of NO05G03920 vs. NCBI_GenBank
Match: OQS00836.1 (eukaryotic translation initiation factor 5 [Achlya hypogyna])

HSP 1 Score: 238.8 bits (608), Expect = 3.300e-59
Identity = 248/438 (56.62%), Postives = 300/438 (68.49%), Query Frame = 0
Query:    1 MNIAGLNPIEDANYRYKMPRILAKVEGRGNGIKTVVINMKDVASALHRMPAEVTKFFGTELGAQTTYREETERAVVNGAHSAPALQALLCRYIQGFVLCPSCGLPETAYKIKG-GVIYQKCDACGEKSMCDMSHKLTTFIINTH---KKASK-DGKSVKEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGELVATMDNLAVEDATAFAAAVGRLEQFLSAHPEATAAQVLDEVRMIATFSALSIEDRLFLFVQAAFGPDAAKQNMVGKHVKVLKGLILNVDAEAYQRRLIGVIEHLCAVTHKETLLKMFPLLLKQLYDEEVVDEEVFLEWAEEEGPTEFTRREVSEEMVEMLRGEAEKFVTWLKEAE 434
            +NIAG  P++D  YRYKMPR++AK+EGRGNGIKTVV+N  ++A ALHR P EVTKFFGTELGAQ+ Y E+TERAVVNGA    A+QA L ++I+ FVLCP+C LPET YK KG   I+ KC ACG     DM+HKLTT++I  H   K+A+K DGK     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          XXXXXXXXXXXXXXXXXXXXXXXX       DNL ++D  A  +A+  +  FLS     T A + DEV    T +AL + DRL +F  AAF  +   +  + K+ +VL+ L   VD+E  Q +LI + EH CAV     LL  FP++LK LYDE++V E+  L W+ +E    +   EV+      L+     F+ WL+ AE
Sbjct:    4 INIAGTQPVDDPEYRYKMPRLIAKIEGRGNGIKTVVVNAVELAMALHRTPGEVTKFFGTELGAQSKYDEKTERAVVNGAFDQSAMQAHLSKFIELFVLCPNCRLPETKYKFKGKESIFHKCLACGAVEPVDMNHKLTTYLIKEHTAAKRAAKGDGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWHTDLSAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNLEIDDDGAIESAIESITTFLSV--PRTDAAIFDEVVRQQTNAALPVMDRLAIFFGAAFTAEILTKGQIAKYARVLEKL---VDSERLQFQLIALTEHFCAV-KVPGLLNSFPIVLKGLYDEDLVAEDTVLAWSVDETRKNYAHYEVTATHAAALKKALAPFIDWLENAE 435          
BLAST of NO05G03920 vs. NCBI_GenBank
Match: GAX23750.1 (translation initiation factor 5 [Fistulifera solaris])

HSP 1 Score: 237.7 bits (605), Expect = 7.300e-59
Identity = 219/433 (50.58%), Postives = 269/433 (62.12%), Query Frame = 0
Query:    1 MNIAGLNPIEDANYRYKMPRILAKVEGRGNGIKTVVINMKDVASALHRMPAEVTKFFGTELGAQTTYREETERAVVNGAHSAPALQALLCRYIQGFVLCPSCGLPETAYKIKGGVIYQKCDACGEKSMCDMSHKLTTFIINTHKKASKDGKSVKEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGELVATMDNLAVEDATAFAAAVGRLEQFLSAHPEATAAQVLDEVRMIATFSALSIEDRLFLFVQAAFGPDAAKQNMVGKHVKVLKGLILNVDAEAYQRRLIGVIEHLCAVTHKETLLKMFPLLLKQLYDEEVVDEEVFLEWAEEEGPTEFTRREVSEEMVEMLRGEAEKFVTWLKEAE 434
            +NIAG  P++D  YRYKMP +  K+EG GNGIKTV++N+ DVA++LHR P EV+KFFGTE+GAQ+ Y  +T+RA+VNGAH+   LQ L+ RYI+ FVLCP+C LPET YKIK   IY  C ACG K M DMSHKL  +I+  +KKA                                           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            +D +AF  AV   + F+  +  AT  Q+++ V      SAL   D++ + + AAF PD  K   V K+  V+   I N +    +R +I  +E  C    K      FP+LLKQLYDE+ +DEE  LEWA ++G +EFT   V E+   +LRGEAE  V WL+EAE
Sbjct:    9 INIAGTTPVDDPAYRYKMPAVFGKIEGSGNGIKTVLVNVLDVANSLHREPGEVSKFFGTEMGAQSRYNADTDRAIVNGAHTDATLQDLMHRYIEKFVLCPTCRLPETKYKIKSDTIYHSCAACGAKDMVDMSHKLCNYILAENKKA-------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDESAFQLAVDATKTFIKENANATDDQLIEYVTNQQMASALKSHDKIRILILAAFTPDFYKNKEVEKYASVI-ARIANSN-RIMERHIISALEAFCVEKTKN-----FPVLLKQLYDEDALDEETILEWA-DQGRSEFTLPSVDEDSRAILRGEAEPVVVWLQEAE 390          
BLAST of NO05G03920 vs. NCBI_GenBank
Match: GAX92262.1 (eukaryotic translation initiation factor 5, putative [Pythium insidiosum])

HSP 1 Score: 236.9 bits (603), Expect = 1.200e-58
Identity = 236/453 (52.10%), Postives = 294/453 (64.90%), Query Frame = 0
Query:    1 MNIAGLNPIEDANYRYKMPRILAKVEGRGNGIKTVVINMKDVASALHRMPAEVTKFFGTELGAQTTYREETERAVVNGAHSAPALQALLCRYIQGFVLCPSCGLPETAYKIKGGVIYQKCDACGEKSMCDMSHKLTTFIINTHKKASKDGKS--------------------VKEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGELVATMDNLAVEDATAFAAAVGRLEQFLSAHPEATAAQVLDEVRMIATFSALSIEDRLFLFVQAAFGPDAAKQNMVGKHVKVLKGLILNVDAEAYQRRLIGVIEHLCAVTHKETLLKMFPLLLKQLYDEEVVDEEVFLEWAEEEGPTEFTRREVSEEMVEMLRGEAEKFVTWLKEAE 434
            MNIAG  P++D  YRYKMPR+ AK+EGRGNGIKT+V+N  ++A+ALHR  AEV KFFG ELGAQ+ Y E+ +RA+VNGA     +Q  L +YI+GFVLCP+C LPE+ YK KG +IY KC ACG     DM+HKLTTFI+  H  A ++ K                         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX               XXXXXXXXXXXXXXXXXXXXXXXXXXX    AT DNL V++  A  +AV  L+++LS +   + +Q+ +E+    T +AL I DRL +F +AAF       N V K+  VL+ +   VD    Q +LI + EH CA+ H E LLK FP++LK LYDE+++DEE  + W       +    E+S++    L    + F+ WL+ A+
Sbjct:    4 MNIAGTQPVDDPEYRYKMPRLQAKIEGRGNGIKTLVVNCSEIATALHRSTAEVCKFFGCELGAQSKYEEKNDRAIVNGAFETGMMQQHLSKYIEGFVLCPACRLPESKYKFKGQMIYHKCYACGAVEPVDMNHKLTTFILKEHAAAKREAKKNGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVWHTDLSPEAVAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATFDNLEVDEENAIESAVSNLQRYLSEN--HSESQIFEELCRQQTNAALPINDRLVIFFRAAFTNQILSSNQVAKYGPVLEKI---VDGTHAQYQLIALTEHFCAIQHPE-LLKRFPVVLKLLYDEDLLDEETLVAWPTAR--KDHAHWEISDDQAASLAALLKPFIEWLENAD 448          
BLAST of NO05G03920 vs. NCBI_GenBank
Match: XP_008871592.1 (hypothetical protein H310_07857 [Aphanomyces invadans] >ETV99816.1 hypothetical protein H310_07857 [Aphanomyces invadans])

HSP 1 Score: 236.1 bits (601), Expect = 2.100e-58
Identity = 218/439 (49.66%), Postives = 268/439 (61.05%), Query Frame = 0
Query:    1 MNIAGLNPIEDANYRYKMPRILAKVEGRGNGIKTVVINMKDVASALHRMPAEVTKFFGTELGAQTTYREETERAVVNGAHSAPALQALLCRYIQGFVLCPSCGLPETAYKIKG-GVIYQKCDACGEKSMCDMSHKLTTFIINTHKKASKDGKSVKEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG-----ELVATMDNLAVEDATAFAAAVGRLEQFLSAHPEATAAQVLDEVRMIATFSALSIEDRLFLFVQAAFGPDAAKQNMVGKHVKVLKGLILNVDAEAYQRRLIGVIEHLCAVTHKETLLKMFPLLLKQLYDEEVVDEEVFLEWAEEEGPTEFTRREVSEEMVEMLRGEAEKFVTWLKEAE 434
            +NIAG  P++D  YRYKMPR++AK+EGRGNGIKTVV+N  ++ASALHR P EVTKFFGTELGAQ+ + + TERAVVNGA  A  +QA L ++I+ FVLCP+C LPET YK KG   I+ KC ACG     DM+HKLTT+++  H  A          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                          E+V + DNL ++D  A  AA   +  FL      ++ ++ DEV    T  AL   DRL +F  AAF       N V K+  VL+ L   VD++  Q ++I + EH CAV    TLLK FP++LK LYDEE++ E++ L W ++         EV+      LR   E F+ WL+ AE
Sbjct:    4 INIAGTTPVDDPEYRYKMPRLIAKIEGRGNGIKTVVVNAVEIASALHRSPGEVTKFFGTELGAQSKFDDATERAVVNGAFEASQMQAQLSKFIELFVLCPNCRLPETKYKFKGKESIFHKCLACGAVEPVDMNHKLTTYLLKEHTAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSEEEIEWHTDLSAEAVAARAKEAEALEAAAHAAMVAPPTSDEVVPSFDNLDIDDEAAIEAATAAVATFLMG--THSSIEIYDEVVRQQTNGALPANDRLSIFFGAAFTSQILSSNQVAKYRPVLEKL---VDSDRMQHQVIALTEHFCAVKF-PTLLKSFPVVLKLLYDEEILSEDIILSWTDDAVRKLHAHFEVTPTQAADLRKSLEPFIFWLQNAE 436          
BLAST of NO05G03920 vs. NCBI_GenBank
Match: OEU15519.1 (eIF-5_eIF-2B-domain-containing protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 235.7 bits (600), Expect = 2.800e-58
Identity = 188/433 (43.42%), Postives = 245/433 (56.58%), Query Frame = 0
Query:    1 MNIAGLNPIEDANYRYKMPRILAKVEGRGNGIKTVVINMKDVASALHRMPAEVTKFFGTELGAQTTYREETERAVVNGAHSAPALQALLCRYIQGFVLCPSCGLPETAYKIKGGVIYQKCDACGEKSMCDMSHKLTTFIINTHKKASKDGKSVKEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGELVATMDNLAVEDATAFAAAVGRLEQFLSAHPEATAAQVLDEVRMIATFSALSIEDRLFLFVQAAFGPDAAKQNMVGKHVKVLKGLILNVDAEAYQRRLIGVIEHLCAVTHKETLLKMFPLLLKQLYDEEVVDEEVFLEWAEEEGPTEFTRREVSEEMVEMLRGEAEKFVTWLKEAE 434
            +NI+G NP++D  YRYKMP +  K+EG GNGIKT + N+ +VA++L+R P EV KFFG ELGAQTTY EET+RA+VNG+H+   LQ L+ RY++ FVLCP+CGLPET Y IK G I+ KC ACG K M DM+HKLT +I+   KK  K       A       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                          +    V+D  A   AV    +FL A+P+A+  ++++ V      SAL   D++ +F +AAF P   K     K+  V+    ++   +  +R LI  +E L     K      FP+++KQLYDE+ ++EE  +EWA E+G +++T   V EE    LRGEAE  V WL+E E
Sbjct:    9 INISGNNPVDDPEYRYKMPAVFGKIEGSGNGIKTAIPNITEVANSLYRPPGEVNKFFGCELGAQTTYNEETDRAIVNGSHTDDTLQKLMHRYVETFVLCPTCGLPETKYSIKNGTIWHKCAACGAKEMVDMNHKLTNYILAQDKKNKKLKNXXXXAAGKTNDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGDSIEEEKDYLKKAMYGKKEDDGFGSDDSDDD-----------------------AVSEAGVDDQGAMLLAVEGTRKFLEANPDASVGEIVEMVTNQQMASALKAHDKVHIFARAAFTPLFFKNKEAEKYAPVVSK--ISNGNKIIERHLIASLEFLSIEKPKG-----FPVMIKQLYDEDALEEETIIEWA-EDGRSDYTLAAVDEETRAALRGEAEPVVVWLQELE 410          
BLAST of NO05G03920 vs. NCBI_GenBank
Match: XP_009835367.1 (hypothetical protein H257_10500 [Aphanomyces astaci] >ETV75319.1 hypothetical protein H257_10500 [Aphanomyces astaci])

HSP 1 Score: 234.2 bits (596), Expect = 8.100e-58
Identity = 229/437 (52.40%), Postives = 279/437 (63.84%), Query Frame = 0
Query:    1 MNIAGLNPIEDANYRYKMPRILAKVEGRGNGIKTVVINMKDVASALHRMPAEVTKFFGTELGAQTTYREETERAVVNGAHSAPALQALLCRYIQGFVLCPSCGLPETAYKIKG-GVIYQKCDACGEKSMCDMSHKLTTFIINTHKKASKDGKSVKEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG--ELVATMDNLAVEDATAFAAAVGRLEQFL-SAHPEATAAQVLDEVRMIATFSALSIEDRLFLFVQAAFGPDAAKQNMVGKHVKVLKGLILNVDAEAYQRRLIGVIEHLCAVTHKETLLKMFPLLLKQLYDEEVVDEEVFLEWAEEEGPTEFTRREVSEEMVEMLRGEAEKFVTWLKEAE 434
            +NIAG  P++D  YRYKMPR++AK+EGRGNGIKTVV+N  ++ASALHR P EVTKFFGTELGAQ+ + + TERAVVNGA  A  +QA L ++I+ FVLCP+C LPET YK KG   I+ +C ACG     DM+HKLTT+++  H  A          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    XXXXX           XXXXXXXXXXXXXXXX              ++VA+ DNL ++D  A  AA   +  FL S H   + A++ DEV    T  AL   DRL +F  AAF       N V K+  VL+ L   VD E  Q ++I + EH CAV     LL  FP++LK LYDE++V EE+ L W +++        +V+      L+   E FV WL+ AE
Sbjct:    4 INIAGTTPVDDPEYRYKMPRLVAKIEGRGNGIKTVVVNAVEIASALHRSPGEVTKFFGTELGAQSKFDDATERAVVNGAFEASQMQAQLSKFIELFVLCPNCRLPETKYKYKGKESIFHRCLACGAVEPVDMNHKLTTYLLKEHTAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKAGXXXXXEVEWHTDLSAEXXXXXXXXXXXXXXXXHSAMVAPPTSSASEDVVASFDNLDIDDEAAIEAATAAVAAFLQSTH---SPAEIYDEVVRQQTNGALPANDRLSIFFGAAFTSQVLSSNQVAKYRPVLEKL---VDNERSQHQVIALTEHFCAVKF-PALLTSFPVVLKLLYDEDLVTEEIILAWTDDDYRKLHAHFQVTPTQAAALKKSLEPFVYWLQNAE 433          
BLAST of NO05G03920 vs. NCBI_GenBank
Match: XP_008614610.1 (translation initiation factor 5 [Saprolegnia diclina VS20] >EQC31882.1 translation initiation factor 5 [Saprolegnia diclina VS20])

HSP 1 Score: 233.8 bits (595), Expect = 1.100e-57
Identity = 253/444 (56.98%), Postives = 305/444 (68.69%), Query Frame = 0
Query:    1 MNIAGLNPIEDANYRYKMPRILAKVEGRGNGIKTVVINMKDVASALHRMPAEVTKFFGTELGAQTTYREETERAVVNGAHSAPALQALLCRYIQGFVLCPSCGLPETAYKIKG-GVIYQKCDACGEKSMCDMSHKLTTFIINTHKKASK----------DGKSVKEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGELVATMDNLAVEDATAFAAAVGRLEQFLSAHPEATAAQVLDEVRMIATFSALSIEDRLFLFVQAAFGPDAAKQNMVGKHVKVLKGLILNVDAEAYQRRLIGVIEHLCAVTHKETLLKMFPLLLKQLYDEEVVDEEVFLEWAEEEGPTEFTRREVSEEMVEMLRGEAEKFVTWLKEAE 434
            +NIAG  P++D  YRYKMPR++AK+EGRGNGIKTVV+N  ++A ALHR P EVTKFFGTELGAQ+ Y ++TERAVVNGA    A+QA L ++I+ FVLCP+C LPET YK KG   I+ KC ACG     DM+HKLTT++I  H  A +                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      ++NL V+D  A  +AV  L  FLS+    T A +LDEV    T +AL + DRL +F  AAF       N + K+ +VL+ L   VD+E  Q +LI + EH CAV    +LL  FP+LLK LYD+E++ E+  L W+ +E    +   EV++     L+     F+ WL+ AE
Sbjct:    4 INIAGTTPVDDPEYRYKMPRLVAKIEGRGNGIKTVVVNAVELAMALHRTPGEVTKFFGTELGAQSKYDDKTERAVVNGAFDQSAMQAQLSKFIELFVLCPNCRLPETKYKFKGKDAIFHKCLACGAVEPVDMNHKLTTYLIKEHTAAKRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLENLNVDDDGAIESAVESLTAFLSS--ARTDAAILDEVIKQQTNAALLVGDRLAIFFGAAFTAQILAANEIAKYARVLEKL---VDSERLQFQLIALTEHFCAV-KVPSLLNAFPVLLKLLYDDEILAEDTILSWSVDETRRNYAHYEVTDAHAAALKKALTPFIDWLENAE 441          
BLAST of NO05G03920 vs. NCBI_GenBank
Match: GAX14974.1 (translation initiation factor 5 [Fistulifera solaris])

HSP 1 Score: 231.9 bits (590), Expect = 4.000e-57
Identity = 218/433 (50.35%), Postives = 268/433 (61.89%), Query Frame = 0
Query:    1 MNIAGLNPIEDANYRYKMPRILAKVEGRGNGIKTVVINMKDVASALHRMPAEVTKFFGTELGAQTTYREETERAVVNGAHSAPALQALLCRYIQGFVLCPSCGLPETAYKIKGGVIYQKCDACGEKSMCDMSHKLTTFIINTHKKASKDGKSVKEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGELVATMDNLAVEDATAFAAAVGRLEQFLSAHPEATAAQVLDEVRMIATFSALSIEDRLFLFVQAAFGPDAAKQNMVGKHVKVLKGLILNVDAEAYQRRLIGVIEHLCAVTHKETLLKMFPLLLKQLYDEEVVDEEVFLEWAEEEGPTEFTRREVSEEMVEMLRGEAEKFVTWLKEAE 434
            +NIAG  P++D  YRYKMP +  K+EG GNGIKTV++N+ DVA++LHR P EV+KFFGTE+GAQ+ Y  +T+RA+VNGAH+   LQ L+ RYI+ FVLCP+C LPET YKIK   IY  C ACG K M DMSHKL  +I+  +KK                                           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            +D +AF  AV   + F+  +  AT  Q+++ V      SAL   D++ + + AAF  D  K   V K+  V+   I N +    +R +I  +E  C    K      FP+LLKQLYDE+ +DEE  LEWA ++G +EFT   V E+   +LRGEAE  V WL+EAE
Sbjct:    9 INIAGTTPVDDPAYRYKMPAVFGKIEGSGNGIKTVLVNVLDVANSLHREPGEVSKFFGTEMGAQSRYSADTDRAIVNGAHTDATLQELMHRYIEKFVLCPTCRLPETKYKIKSDTIYHSCAACGAKDMVDMSHKLCNYILAENKK-------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDSAFQLAVDATKTFIKENANATDDQLIEYVTNQQMASALKSHDKIRILILAAFTSDFYKNKEVEKYAPVI-ARIANSN-RIMERHIISALEAFCVEKTKN-----FPVLLKQLYDEDALDEETILEWA-DQGRSEFTLPSVDEDSRAILRGEAEPVVVWLQEAE 390          
BLAST of NO05G03920 vs. NCBI_GenBank
Match: XP_002181337.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC47260.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 231.1 bits (588), Expect = 6.800e-57
Identity = 218/433 (50.35%), Postives = 271/433 (62.59%), Query Frame = 0
Query:    1 MNIAGLNPIEDANYRYKMPRILAKVEGRGNGIKTVVINMKDVASALHRMPAEVTKFFGTELGAQTTYREETERAVVNGAHSAPALQALLCRYIQGFVLCPSCGLPETAYKIKGGVIYQKCDACGEKSMCDMSHKLTTFIINTHKKASKDGKSVKEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGELVATMDNLAVEDATAFAAAVGRLEQFLSAHPEATAAQVLDEVRMIATFSALSIEDRLFLFVQAAFGPDAAKQNMVGKHVKVLKGLILNVDAEAYQRRLIGVIEHLCAVTHKETLLKMFPLLLKQLYDEEVVDEEVFLEWAEEEGPTEFTRREVSEEMVEMLRGEAEKFVTWLKEAE 434
            +NI+G +P++D  YRYKMP +  K+EG GNGIKTV+ N+ +VA +LHR P EV KFFGTELGAQT Y  ET+RAVVNGAH    LQ L+ RYI+ FVLCP+C LPET YKIK   I+ KC ACG K M DMSHKL  +I+   KKA KD K  K+                              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           V+D  A   AV   +++++ + + +  ++ + V      SAL   D++ + V+AA      K   + K+   +    +    +  +R LI  +E LC    K      FP+++KQ YDE+ + EE  LEWA +EG +EFT  EV E++   LRGEAE  V WL+EA+
Sbjct:    9 INISGASPVDDPEYRYKMPAVFGKIEGSGNGIKTVIPNITEVALSLHRQPGEVNKFFGTELGAQTRYSAETDRAVVNGAHMDAVLQDLMHRYIERFVLCPNCNLPETDYKIKNDAIWHKCAACGAKEMVDMSHKLCNYILAEDKKAKKDSKKSKKG-----------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVDDQGALLLAVEATKKYIAENSDVSDKELSEVVTNQQMASALKSHDKVHIIVRAALSAQFFKNKEIEKYSSAIYS--ITSGNKIMERHLIASLEALCIDKPKN-----FPVMIKQFYDEDALAEETILEWA-DEGRSEFTLPEVDEDVRATLRGEAEPVVVWLQEAD 404          
The following BLAST results are available for this feature:
BLAST of NO05G03920 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_002288103.12.700e-6151.04predicted protein [Thalassiosira pseudonana CCMP13... [more]
OQS00836.13.300e-5956.62eukaryotic translation initiation factor 5 [Achlya... [more]
GAX23750.17.300e-5950.58translation initiation factor 5 [Fistulifera solar... [more]
GAX92262.11.200e-5852.10eukaryotic translation initiation factor 5, putati... [more]
XP_008871592.12.100e-5849.66hypothetical protein H310_07857 [Aphanomyces invad... [more]
OEU15519.12.800e-5843.42eIF-5_eIF-2B-domain-containing protein [Fragilario... [more]
XP_009835367.18.100e-5852.40hypothetical protein H257_10500 [Aphanomyces astac... [more]
XP_008614610.11.100e-5756.98translation initiation factor 5 [Saprolegnia dicli... [more]
GAX14974.14.000e-5750.35translation initiation factor 5 [Fistulifera solar... [more]
XP_002181337.16.800e-5750.35predicted protein [Phaeodactylum tricornutum CCAP ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL085nonsL085Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR120ngnoR120Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR117ngnoR117Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003468NSK003468Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G03920.1NO05G03920.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|625250gene_3200Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100008g39gene2553Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G03920.1NO05G03920.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G03920 ID=NO05G03920|Name=NO05G03920|organism=Nannochloropsis oceanica|type=gene|length=1359bp
ATGAACATAGCGGGGCTCAACCCCATCGAAGACGCCAACTATCGGTACAA
AATGCCCCGCATCTTGGCTAAAGTGGAGGGGCGTGGAAACGGGATAAAAA
CCGTCGTTATCAACATGAAAGACGTCGCCTCTGCCCTCCACCGCATGCCC
GCAGAAGTCACCAAATTCTTTGGCACGGAACTTGGCGCCCAGACCACCTA
CAGGGAAGAAACGGAGCGAGCGGTGGTGAACGGCGCGCATTCTGCGCCTG
CGCTGCAGGCGCTTTTGTGCCGGTACATCCAGGGGTTTGTCCTTTGTCCC
TCTTGTGGGTTGCCTGAGACGGCCTACAAGATCAAAGGGGGGGTGATTTA
TCAGAAATGTGACGCGTGTGGGGAGAAGAGTATGTGTGATATGAGTCATA
AATTGACGACATTCATCATTAACACGCATAAGAAGGCGAGTAAGGATGGG
AAGAGCGTCAAGGAGGCAAAGGAGAAGAAGAAGAAGGTGCGGGCCAAGGC
CGAGGCGGACGCGGGGGAGGAGGACGGAGATGAAGACGGGGAGGCTGGAG
GGGGAAAAGAGAAGGAGAAGAAAAAGAAGAAGAAAAAGGATAAGGACGAC
AGGGAGAAGAAGAAGAAGAAGAAGGAGAAAAAGGAGAAAAGCTCTGAGGC
GGGTAGCAGTGACGGGGACGGGAACGGCAACGGCCTGGTCAATGGCAGCA
GCAGTAGCAAGAAATCCGGCGGTGGCTCCTCCTCGGACGAAGATGAAGAC
GAGGAAGGAGAAGACGGAGAGTTGGTGGCTACGATGGATAATCTGGCCGT
TGAGGACGCGACCGCTTTCGCGGCTGCTGTTGGGAGGTTGGAGCAGTTCT
TGAGTGCCCACCCGGAAGCGACGGCGGCGCAGGTGTTGGATGAGGTGAGG
ATGATTGCGACTTTTTCGGCATTGTCCATTGAAGATCGGTTATTCTTGTT
TGTCCAGGCAGCATTTGGGCCGGATGCGGCGAAGCAAAACATGGTGGGGA
AGCATGTGAAGGTCTTGAAGGGATTAATTTTGAATGTCGACGCCGAGGCG
TACCAGCGGCGGTTGATTGGAGTGATAGAGCATCTATGTGCCGTCACGCA
CAAGGAGACGCTGCTGAAGATGTTTCCTCTGTTGCTGAAGCAGCTGTATG
ATGAGGAGGTGGTGGACGAAGAGGTGTTTTTGGAGTGGGCGGAGGAGGAG
GGCCCTACTGAGTTCACACGACGAGAGGTGAGTGAGGAAATGGTGGAGAT
GTTGAGGGGGGAAGCGGAGAAATTTGTGACGTGGTTGAAGGAGGCGGAGG
AGAGTGGGTCAGAGGAGGATGAGGAGAGCGAGGAGGAGGAGGAGGACAGC
GAGGACTAA
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protein sequence of NO05G03920.1

>NO05G03920.1-protein ID=NO05G03920.1-protein|Name=NO05G03920.1|organism=Nannochloropsis oceanica|type=polypeptide|length=453bp
MNIAGLNPIEDANYRYKMPRILAKVEGRGNGIKTVVINMKDVASALHRMP
AEVTKFFGTELGAQTTYREETERAVVNGAHSAPALQALLCRYIQGFVLCP
SCGLPETAYKIKGGVIYQKCDACGEKSMCDMSHKLTTFIINTHKKASKDG
KSVKEAKEKKKKVRAKAEADAGEEDGDEDGEAGGGKEKEKKKKKKKDKDD
REKKKKKKEKKEKSSEAGSSDGDGNGNGLVNGSSSSKKSGGGSSSDEDED
EEGEDGELVATMDNLAVEDATAFAAAVGRLEQFLSAHPEATAAQVLDEVR
MIATFSALSIEDRLFLFVQAAFGPDAAKQNMVGKHVKVLKGLILNVDAEA
YQRRLIGVIEHLCAVTHKETLLKMFPLLLKQLYDEEVVDEEVFLEWAEEE
GPTEFTRREVSEEMVEMLRGEAEKFVTWLKEAEESGSEEDEESEEEEEDS
ED*
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Synonyms
Publications