NO05G03790, NO05G03790 (gene) Nannochloropsis oceanica

Overview
NameNO05G03790
Unique NameNO05G03790
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1095
Alignment locationchr5:988697..989791 +

Link to JBrowse

Properties
Property NameValue
DescriptionMalate dehydrogenase, cytoplasmic
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:988697..989791 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO:0006108malate metabolic process
GO:0055114oxidation-reduction process
GO:0009987cellular process
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016615malate dehydrogenase activity
GO:0016616oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0016491oxidoreductase activity
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR015955Lactate_DH/Glyco_Ohase_4_C
IPR036291NAD(P)-bd_dom_sf
IPR010945Malate_DH_type2
IPR022383Lactate/malate_DH_C
IPR001236Lactate/malate_DH_N
Homology
[Close]
BLAST of NO05G03790 vs. NCBI_GenBank
Match: EWM27982.1 (malate cytoplasmic isoform 2 [Nannochloropsis gaditana])

HSP 1 Score: 431.0 bits (1107), Expect = 3.600e-117
Identity = 225/282 (79.79%), Postives = 249/282 (88.30%), Query Frame = 0 
Query:    1 MIGHEEHNSAPTATKRVLITGGAGQIAYALLPHLISGRVFGCQTRLIVHLLDIPGTENALRGVQMEIEDAASPVVVGLVTTTDLRTAFTGVDYAILLGGFPRLPGMERKELLAKNVEIITTHAAALDDHASRDVKVVVVANPANTLALVAKKRASSLPAENFSCLTRLDHDRLRGMVAKKLTSLRISSSIPECSAAITATQVRNVAIWGNHSSTQVPSAGQAQVELGGKWVSIHEVLQEKDAAWLHGQLVTSVQQRGAEILAARKLSSALSAASAISKHVRD 283
            MIG EEH  APT  KRVLITGGAGQIAYALLPHLISGRVFG Q RL+VHLLDI GTENALRGVQMEIEDAASPVVVG+VTTTDLR AFT VDYAILLGGFPRLPGMERKELLAKNVEIIT HAAALD++ASR VKV+VVANPANTLAL+AKKRA+SLPAENFSCLTRLDHDRLRGM+AKK+ SL+    IP+   A+TA QVRNV IWGNHSSTQVPSA +AQV LGG+WV + +++ +++A WLH +LVT VQQRGAEILAARKLSSALSAA AI+ H +D
Sbjct:   68 MIGREEH--APTCVKRVLITGGAGQIAYALLPHLISGRVFGPQVRLMVHLLDIDGTENALRGVQMEIEDAASPVVVGVVTTTDLRVAFTDVDYAILLGGFPRLPGMERKELLAKNVEIITMHAAALDEYASRAVKVLVVANPANTLALIAKKRAASLPAENFSCLTRLDHDRLRGMIAKKIDSLK----IPDAHGAVTAMQVRNVIIWGNHSSTQVPSAAKAQVRLGGRWVPVLDIIGDEEAVWLHDELVTQVQQRGAEILAARKLSSALSAAQAIANHFKD 343
[Close]
BLAST of NO05G03790 vs. NCBI_GenBank
Match: XP_021290345.1 (malate dehydrogenase [Herrania umbratica])

HSP 1 Score: 329.3 bits (843), Expect = 1.500e-86
Identity = 172/341 (50.44%), Postives = 236/341 (69.21%), Query Frame = 0 
Query:   16 RVLITGGAGQIAYALLPHLISGRVFGCQTRLIVHLLDIPGTENALRGVQMEIEDAASPVVVGLVTTTDLRTAFTGVDYAILLGGFPRLPGMERKELLAKNVEIITTHAAALDDHASRDVKVVVVANPANTLALVAKKRASSLPAENFSCLTRLDHDRLRGMVAKKLTSLRISSSIPECSAAITATQVRNVAIWGNHSSTQVPSAGQAQVELGGKWVSIHEVLQEKDAAWLHGQLVTSVQQRGAEILAARKLSSALSAASAISKHVRDWVHGTPEGEFVSMGVFVSKDCTYDIPEDIFFSFPVKCKGGQWKVVEGLSLSEETRRRVLSTVTELVEERDLALS 357
            RVL+TG AGQI YAL+P +  G + G    +I+H+LDIP    AL GV+ME+ DAA P++ G+V TTD+  A TGV+ A+++GGFPR  GMERK++++KNV I  + A+AL+ HA+ + KV+VVANPANT AL+ K+ A S+PA N +CLTRLDH+R  G ++++L               +    V+NV IWGNHSSTQ P    A V+       + E++  KD AWL+G+ +T+VQQRGA I+ ARKLSSALSAASA   H+RDWV GTPEG +VSMGV+   D +Y++P  + +SFPV CK G+WK+V+GLS+ E +R+++  T  EL EE+ LA S
Sbjct:    7 RVLVTGAAGQIGYALVPMIARGVMLGADQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDVVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPANNITCLTRLDHNRALGQISERLN--------------VQVCDVKNVIIWGNHSSTQYPDVNHATVKTPSGEKPVRELV--KDDAWLNGEFITTVQQRGAAIIKARKLSSALSAASAACDHIRDWVLGTPEGTWVSMGVY--SDGSYNVPAGLIYSFPVTCKNGEWKIVQGLSIDEFSRKKLDLTGEELSEEKALAYS 329
[Close]
BLAST of NO05G03790 vs. NCBI_GenBank
Match: XP_010556907.1 (PREDICTED: malate dehydrogenase, cytoplasmic 2 [Tarenaya hassleriana])

HSP 1 Score: 328.9 bits (842), Expect = 1.900e-86
Identity = 171/341 (50.15%), Postives = 234/341 (68.62%), Query Frame = 0 
Query:   16 RVLITGGAGQIAYALLPHLISGRVFGCQTRLIVHLLDIPGTENALRGVQMEIEDAASPVVVGLVTTTDLRTAFTGVDYAILLGGFPRLPGMERKELLAKNVEIITTHAAALDDHASRDVKVVVVANPANTLALVAKKRASSLPAENFSCLTRLDHDRLRGMVAKKLTSLRISSSIPECSAAITATQVRNVAIWGNHSSTQVPSAGQAQVELGGKWVSIHEVLQEKDAAWLHGQLVTSVQQRGAEILAARKLSSALSAASAISKHVRDWVHGTPEGEFVSMGVFVSKDCTYDIPEDIFFSFPVKCKGGQWKVVEGLSLSEETRRRVLSTVTELVEERDLALS 357
            RVL+TG AGQI YAL+P +  G + G    +I+H+LDIP    AL GV+ME+ DAA P++ G+V TTD   A TGV+ A+++GGFPR  GMERK++++KNV I  + AAAL+ HA+ + KV+VVANPANT AL+ K+ A S+P +N +CLTRLDH+R  G ++++L              ++  + V+NV IWGNHSSTQ P    A VE       + E++  KD  WL G  +T+VQQRGA I+ ARKLSSALSAAS+   H+RDWV GTPEG +VSMGV+   D +YD+P  + +SFPV C+ G+W +V+GL + E +R+++ ST  EL EE+DLA S
Sbjct:    7 RVLVTGAAGQIGYALVPMIARGIMLGADQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKSQAAALEKHAAPNCKVLVVANPANTNALILKEFAPSIPEKNITCLTRLDHNRALGQISERL--------------SVPVSDVKNVIIWGNHSSTQYPDVNHATVETPSGEKPVRELV--KDDEWLKGDFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVY--SDGSYDVPAGLIYSFPVTCRNGEWTIVQGLPIDEFSRKKMDSTAEELKEEKDLAYS 329
[Close]
BLAST of NO05G03790 vs. NCBI_GenBank
Match: XP_016677894.1 (PREDICTED: malate dehydrogenase-like [Gossypium hirsutum] >XP_017638432.1 PREDICTED: malate dehydrogenase-like [Gossypium arboreum] >KHG12081.1 Malate dehydrogenase-2C cytoplasmic [Gossypium arboreum])

HSP 1 Score: 328.2 bits (840), Expect = 3.300e-86
Identity = 170/341 (49.85%), Postives = 236/341 (69.21%), Query Frame = 0 
Query:   16 RVLITGGAGQIAYALLPHLISGRVFGCQTRLIVHLLDIPGTENALRGVQMEIEDAASPVVVGLVTTTDLRTAFTGVDYAILLGGFPRLPGMERKELLAKNVEIITTHAAALDDHASRDVKVVVVANPANTLALVAKKRASSLPAENFSCLTRLDHDRLRGMVAKKLTSLRISSSIPECSAAITATQVRNVAIWGNHSSTQVPSAGQAQVELGGKWVSIHEVLQEKDAAWLHGQLVTSVQQRGAEILAARKLSSALSAASAISKHVRDWVHGTPEGEFVSMGVFVSKDCTYDIPEDIFFSFPVKCKGGQWKVVEGLSLSEETRRRVLSTVTELVEERDLALS 357
            RVL+TG AGQI YAL+P +  G + G    +I+H+LDIP    AL GV+ME+ DAA P++ G+V TTD+  A TGV+ A+++GGFPR  GMERK++++KNV I  + A AL+ HA+ + KV+VVANPANT AL+ K+ A S+PA+N +CLTRLDH+R  G +++KL               +  + V+NV IWGNHSSTQ P    A V+       + E++  KD AWL+G+ +T+VQQRGA I+ ARKLSSALSAASA   H+RDWV GTPEG +VSMGV+   D +Y+ P  + +SFPV C+ G+W +V+GL++ E +R+++  T  EL EE++LA S
Sbjct:    7 RVLVTGAAGQIGYALVPMIARGVMLGADQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDVVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKSQATALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLN--------------VQVSDVKNVIIWGNHSSTQYPDVNHATVKTPSGEKPVRELV--KDDAWLNGEFITTVQQRGAAIIKARKLSSALSAASAACDHIRDWVLGTPEGTWVSMGVY--SDGSYNAPAGVIYSFPVTCRNGEWTIVQGLAIDEFSRKKLDLTGAELTEEKELAYS 329
[Close]
BLAST of NO05G03790 vs. NCBI_GenBank
Match: XP_023645479.1 (malate dehydrogenase 1, cytoplasmic [Capsella rubella])

HSP 1 Score: 328.2 bits (840), Expect = 3.300e-86
Identity = 169/341 (49.56%), Postives = 235/341 (68.91%), Query Frame = 0 
Query:   16 RVLITGGAGQIAYALLPHLISGRVFGCQTRLIVHLLDIPGTENALRGVQMEIEDAASPVVVGLVTTTDLRTAFTGVDYAILLGGFPRLPGMERKELLAKNVEIITTHAAALDDHASRDVKVVVVANPANTLALVAKKRASSLPAENFSCLTRLDHDRLRGMVAKKLTSLRISSSIPECSAAITATQVRNVAIWGNHSSTQVPSAGQAQVELGGKWVSIHEVLQEKDAAWLHGQLVTSVQQRGAEILAARKLSSALSAASAISKHVRDWVHGTPEGEFVSMGVFVSKDCTYDIPEDIFFSFPVKCKGGQWKVVEGLSLSEETRRRVLSTVTELVEERDLALS 357
            RVL+TG AGQI YAL+P +  G + G    +I+H+LDIP    AL GV+ME+ DAA P++ G+V TTD     TGV+ A+++GGFPR  GMERK++++KNV I  + AAAL+ HA+ + KV+VVANPANT AL+ K+ A S+P +N +CLTRLDH+R  G V+++L              ++  + V+NV IWGNHSSTQ P    A+V+       + E++  KD  WL+G+ +T+VQQRGA I+ ARKLSSALSAAS+   H+RDWV GTPEG FVSMGV+   D +Y++P  + +SFPV C+ G+W +V+GL + E +R+++  T  EL EE+DLA S
Sbjct:    7 RVLVTGAAGQIGYALVPMIARGIMLGADQPVILHMLDIPPAAEALNGVKMELIDAAFPLLKGVVATTDAVEGCTGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKSQAAALEKHAAPNCKVLVVANPANTNALILKEFAPSIPEKNITCLTRLDHNRALGQVSERL--------------SVPVSDVKNVIIWGNHSSTQYPDVNHAKVQTSSGEKPVRELV--KDDEWLNGEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPEGTFVSMGVY--SDGSYNVPSGLIYSFPVTCRNGEWSIVQGLPIDEVSRKKMDLTAEELKEEKDLAYS 329
[Close]
BLAST of NO05G03790 vs. NCBI_GenBank
Match: NP_001266061.1 (malate dehydrogenase, cytoplasmic-like [Cicer arietinum] >CAC10208.1 cytosolic malate dehydrogenase [Cicer arietinum])

HSP 1 Score: 327.8 bits (839), Expect = 4.300e-86
Identity = 169/341 (49.56%), Postives = 238/341 (69.79%), Query Frame = 0 
Query:   16 RVLITGGAGQIAYALLPHLISGRVFGCQTRLIVHLLDIPGTENALRGVQMEIEDAASPVVVGLVTTTDLRTAFTGVDYAILLGGFPRLPGMERKELLAKNVEIITTHAAALDDHASRDVKVVVVANPANTLALVAKKRASSLPAENFSCLTRLDHDRLRGMVAKKLTSLRISSSIPECSAAITATQVRNVAIWGNHSSTQVPSAGQAQVELGGKWVSIHEVLQEKDAAWLHGQLVTSVQQRGAEILAARKLSSALSAASAISKHVRDWVHGTPEGEFVSMGVFVSKDCTYDIPEDIFFSFPVKCKGGQWKVVEGLSLSEETRRRVLSTVTELVEERDLALS 357
            RVL+TG AGQI YAL+P +  G + G    +I+H+LDIP    +L GV+ME+ DAA P++ G+V TTD+  A TGV+ A+++GGFPR  GMERK++++KNV I  + A+AL+ HA+ + KV+VVANPANT AL+ K+ A S+P +N SCLTRLDH+R  G ++++L              ++  ++++NV IWGNHSSTQ P    A V+       + E++   D AWL+G+ + +VQQRGA I+ ARKLSSALSAASA   H+RDWV GTPEG FVSMGV+   D +Y++P  + +SFPV C GG+WK+V+GLS+ E +R+++  T  EL EE++LA S
Sbjct:    7 RVLVTGAAGQIGYALVPMIARGVMLGPDQPVILHMLDIPPAAESLNGVKMELVDAAFPLLKGVVATTDVVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEQHAAANCKVLVVANPANTNALILKEFAPSIPEKNISCLTRLDHNRALGQISERL--------------SVQVSEIKNVIIWGNHSSTQYPDVTHATVKTPAGEKPVRELV--SDDAWLNGEFIPTVQQRGAAIIKARKLSSALSAASAACDHIRDWVLGTPEGTFVSMGVY--SDGSYNVPAGLIYSFPVTCAGGEWKIVQGLSIDEFSRKKLDLTAEELSEEKNLAYS 329
[Close]
BLAST of NO05G03790 vs. NCBI_GenBank
Match: XP_008224355.1 (PREDICTED: malate dehydrogenase [Prunus mume])

HSP 1 Score: 327.8 bits (839), Expect = 4.300e-86
Identity = 170/341 (49.85%), Postives = 237/341 (69.50%), Query Frame = 0 
Query:   16 RVLITGGAGQIAYALLPHLISGRVFGCQTRLIVHLLDIPGTENALRGVQMEIEDAASPVVVGLVTTTDLRTAFTGVDYAILLGGFPRLPGMERKELLAKNVEIITTHAAALDDHASRDVKVVVVANPANTLALVAKKRASSLPAENFSCLTRLDHDRLRGMVAKKLTSLRISSSIPECSAAITATQVRNVAIWGNHSSTQVPSAGQAQVELGGKWVSIHEVLQEKDAAWLHGQLVTSVQQRGAEILAARKLSSALSAASAISKHVRDWVHGTPEGEFVSMGVFVSKDCTYDIPEDIFFSFPVKCKGGQWKVVEGLSLSEETRRRVLSTVTELVEERDLALS 357
            RVL+TG AGQI YAL+P +  G + G    +I+HLLDIP    AL GV+ME+ DAA P++ G+V TTD+  A TGV+ A+++GGFPR  GMERK++++KNV I  + A+AL+ HA+ + KV+VVANPANT AL+ K+ A S+P +N +CLTRLDH+R  G V+++L               +  + V+NV IWGNHSSTQ P    A V+      ++ E++   D AWL G+ +T+VQQRGA I+ ARKLSSALSAAS+   H+RDWV GTPEG +VSMGV+   D +Y++P  + +SFPV C+ G+WK+V+GLS+ E +R+++ +T  EL EE+ LA S
Sbjct:    7 RVLVTGAAGQIGYALVPMIARGVILGADQPVILHLLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDVVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEKHAAANCKVLVVANPANTNALILKEFAPSIPEKNITCLTRLDHNRALGQVSERLN--------------VQVSDVKNVIIWGNHSSTQYPDVNHATVKTPSGEKAVRELV--ADDAWLTGEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVY--SDGSYNVPSGLIYSFPVTCQNGEWKIVQGLSIDEFSRKKLDATADELSEEKALAYS 329
[Close]
BLAST of NO05G03790 vs. NCBI_GenBank
Match: XP_012481980.1 (PREDICTED: malate dehydrogenase [Gossypium raimondii] >XP_016724419.1 PREDICTED: malate dehydrogenase-like [Gossypium hirsutum] >KJB27674.1 hypothetical protein B456_005G050200 [Gossypium raimondii] >KJB27675.1 hypothetical protein B456_005G050200 [Gossypium raimondii])

HSP 1 Score: 327.8 bits (839), Expect = 4.300e-86
Identity = 171/341 (50.15%), Postives = 235/341 (68.91%), Query Frame = 0 
Query:   16 RVLITGGAGQIAYALLPHLISGRVFGCQTRLIVHLLDIPGTENALRGVQMEIEDAASPVVVGLVTTTDLRTAFTGVDYAILLGGFPRLPGMERKELLAKNVEIITTHAAALDDHASRDVKVVVVANPANTLALVAKKRASSLPAENFSCLTRLDHDRLRGMVAKKLTSLRISSSIPECSAAITATQVRNVAIWGNHSSTQVPSAGQAQVELGGKWVSIHEVLQEKDAAWLHGQLVTSVQQRGAEILAARKLSSALSAASAISKHVRDWVHGTPEGEFVSMGVFVSKDCTYDIPEDIFFSFPVKCKGGQWKVVEGLSLSEETRRRVLSTVTELVEERDLALS 357
            RVL+TG AGQI YAL+P +  G + G    +I+H+LDIP    AL GV+ME+ DAA P++ G+V TTD   A TGV+ A+++GGFPR  GMERK++++KNV I  + A+AL+ HA+ + KV+VVANPANT AL+ K+ A S+PA+N +CLTRLDH+R  G +++KL               +  + V+NV IWGNHSSTQ P    A V        + E++  KD AWL+G+ +T+VQQRGA I+ ARKLSSALSAASA   H+RDWV GTPEG +VSMGV+   D +Y+ P  + +SFPV CK G+W +V+GL++ E +R+++  T  EL EE++LA S
Sbjct:    7 RVLVTGAAGQIGYALVPMIARGVMLGADQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLN--------------VQVSDVKNVIIWGNHSSTQYPDVNHATVMTPSGEKPVRELV--KDDAWLNGEFITTVQQRGAAIIKARKLSSALSAASAACDHIRDWVLGTPEGTWVSMGVY--SDGSYNAPAGVIYSFPVTCKNGEWTIVQGLAIDEFSRKKLDLTGVELTEEKELAYS 329
[Close]
BLAST of NO05G03790 vs. NCBI_GenBank
Match: XP_022959121.1 (malate dehydrogenase [Cucurbita moschata])

HSP 1 Score: 327.8 bits (839), Expect = 4.300e-86
Identity = 171/342 (50.00%), Postives = 239/342 (69.88%), Query Frame = 0 
Query:   16 RVLITGGAGQIAYALLPHLISGRVFGCQTRLIVHLLDIPGTENALRGVQMEIEDAASPVVVGLVTTTDLRTAFTGVDYAILLGGFPRLPGMERKELLAKNVEIITTHAAALDDHASRDVKVVVVANPANTLALVAKKRASSLPAENFSCLTRLDHDRLRGMVAKKLTSLRISSSIPECSAAITATQVRNVAIWGNHSSTQVPSAGQAQVEL-GGKWVSIHEVLQEKDAAWLHGQLVTSVQQRGAEILAARKLSSALSAASAISKHVRDWVHGTPEGEFVSMGVFVSKDCTYDIPEDIFFSFPVKCKGGQWKVVEGLSLSEETRRRVLSTVTELVEERDLALS 357
            RVL+TG AGQI YAL+P +  G + G    +I+H+LDIP    +L GV+ME+ DAA P++ G+V TTD+  A TGV+ AI++GGFPR  GMERK++++KNV I    A+AL+ HA+ + KV+VVANPANT AL+ K+ A S+P +N SCLTRLDH+R  G ++++L               +  ++V+NV IWGNHSSTQ P    A V+L  G+  S+ E++   D AWL+G+ +++VQQRGA I+ ARKLSSALSAASA   H+RDWV GTPEG +VSMGV+   D +Y++P  + +SFPV C+ G+W +V+GLS+ E +R+++  T  EL EE+ LA S
Sbjct:    7 RVLVTGAAGQIGYALVPMIARGVLLGSNQPVILHMLDIPPAAESLNGVKMELVDAAFPLLKGVVATTDVVEACTGVNIAIMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAANCKVLVVANPANTNALILKEFAPSIPEKNISCLTRLDHNRALGQISERLN--------------VQVSEVKNVIIWGNHSSTQYPDVNHATVKLPSGEEKSVRELV--ADDAWLNGEFISTVQQRGAAIIKARKLSSALSAASAACDHIRDWVLGTPEGTWVSMGVY--SDGSYNVPAGLMYSFPVTCRNGEWSIVQGLSIDEYSRKKLDLTAEELTEEKALAYS 330
[Close]
BLAST of NO05G03790 vs. NCBI_GenBank
Match: XP_023006038.1 (malate dehydrogenase [Cucurbita maxima])

HSP 1 Score: 327.4 bits (838), Expect = 5.600e-86
Identity = 171/342 (50.00%), Postives = 239/342 (69.88%), Query Frame = 0 
Query:   16 RVLITGGAGQIAYALLPHLISGRVFGCQTRLIVHLLDIPGTENALRGVQMEIEDAASPVVVGLVTTTDLRTAFTGVDYAILLGGFPRLPGMERKELLAKNVEIITTHAAALDDHASRDVKVVVVANPANTLALVAKKRASSLPAENFSCLTRLDHDRLRGMVAKKLTSLRISSSIPECSAAITATQVRNVAIWGNHSSTQVPSAGQAQVEL-GGKWVSIHEVLQEKDAAWLHGQLVTSVQQRGAEILAARKLSSALSAASAISKHVRDWVHGTPEGEFVSMGVFVSKDCTYDIPEDIFFSFPVKCKGGQWKVVEGLSLSEETRRRVLSTVTELVEERDLALS 357
            RVL+TG AGQI YAL+P +  G + G    +I+H+LDIP    +L GV+ME+ DAA P++ G+V TTD+  A TGV+ AI++GGFPR  GMERK++++KNV I    A+AL+ HA+ + KV+VVANPANT AL+ K+ A S+P +N SCLTRLDH+R  G ++++L               +  ++V+NV IWGNHSSTQ P    A V+L  G+  S+ E++   D AWL+G+ +++VQQRGA I+ ARKLSSALSAASA   H+RDWV GTPEG +VSMGV+   D +Y++P  + +SFPV C+ G+W +V+GLS+ E +R+++  T  EL EE+ LA S
Sbjct:    7 RVLVTGAAGQIGYALVPMIARGVLLGSNQPVILHMLDIPPAAESLNGVKMELVDAAFPLLKGVVATTDVVEACTGVNIAIMVGGFPRKEGMERKDVMSKNVSIYKAQASALEKHAAANCKVLVVANPANTNALILKEFAPSIPEKNISCLTRLDHNRALGQISERLN--------------VQVSEVKNVIIWGNHSSTQYPDVNHATVKLPSGEEKSVRELV--ADDAWLNGEFISTVQQRGAAIIKARKLSSALSAASAACDHIRDWVLGTPEGTWVSMGVY--SDGSYNVPAGLMYSFPVTCRNGEWSIVQGLSIDEFSRKKLDLTAEELTEEKALAYS 330
The following BLAST results are available for this feature:
BLAST of NO05G03790 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27982.13.600e-11779.79malate cytoplasmic isoform 2 [Nannochloropsis gadi... [more]
XP_021290345.11.500e-8650.44malate dehydrogenase [Herrania umbratica][more]
XP_010556907.11.900e-8650.15PREDICTED: malate dehydrogenase, cytoplasmic 2 [Ta... [more]
XP_016677894.13.300e-8649.85PREDICTED: malate dehydrogenase-like [Gossypium hi... [more]
XP_023645479.13.300e-8649.56malate dehydrogenase 1, cytoplasmic [Capsella rube... [more]
NP_001266061.14.300e-8649.56malate dehydrogenase, cytoplasmic-like [Cicer arie... [more]
XP_008224355.14.300e-8649.85PREDICTED: malate dehydrogenase [Prunus mume][more]
XP_012481980.14.300e-8650.15PREDICTED: malate dehydrogenase [Gossypium raimond... [more]
XP_022959121.14.300e-8650.00malate dehydrogenase [Cucurbita moschata][more]
XP_023006038.15.600e-8650.00malate dehydrogenase [Cucurbita maxima][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL085nonsL085Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR120ngnoR120Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR117ngnoR117Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003478NSK003478Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G03790.1NO05G03790.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100008g23gene2542Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G03790.1NO05G03790.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G03790 ID=NO05G03790|Name=NO05G03790|organism=Nannochloropsis oceanica|type=gene|length=1095bp
ATGATCGGACACGAGGAGCATAACTCGGCCCCCACGGCGACCAAGCGCGT
CTTGATTACAGGGGGGGCAGGCCAGATTGCCTATGCGTTGCTCCCCCATC
TCATTAGCGGGCGCGTTTTCGGTTGCCAAACCCGCTTGATCGTGCACTTG
CTCGACATCCCTGGGACGGAGAACGCCCTGCGCGGCGTGCAAATGGAGAT
TGAGGACGCAGCCTCACCCGTCGTCGTGGGCTTGGTGACGACAACAGATT
TACGCACGGCCTTTACCGGGGTGGACTACGCGATTTTGTTGGGTGGGTTC
CCTCGCTTGCCAGGAATGGAACGCAAAGAACTCCTCGCCAAGAACGTGGA
GATCATAACCACGCACGCCGCCGCCCTGGACGATCACGCTAGCCGGGATG
TCAAGGTTGTGGTGGTGGCCAATCCAGCCAACACTCTAGCACTAGTAGCG
AAGAAGCGGGCCTCAAGCTTGCCTGCGGAGAACTTCTCGTGTTTGACTCG
CCTTGATCACGATCGCCTCCGTGGCATGGTGGCCAAGAAACTCACCTCCC
TCCGCATCTCTTCTTCTATCCCGGAGTGCAGCGCCGCCATCACAGCCACC
CAGGTTCGCAATGTTGCTATTTGGGGCAATCACTCCAGCACGCAAGTCCC
GTCTGCCGGCCAAGCCCAGGTGGAGCTTGGGGGAAAATGGGTTTCTATCC
ACGAAGTGTTGCAAGAAAAAGACGCGGCGTGGCTACATGGTCAGTTGGTC
ACGAGCGTACAGCAGCGGGGGGCGGAGATTTTGGCTGCCCGGAAACTGAG
CTCGGCCTTGAGTGCTGCCAGCGCGATTTCGAAACACGTTAGGGACTGGG
TGCATGGGACGCCTGAGGGGGAGTTTGTGAGTATGGGTGTGTTTGTGAGT
AAGGACTGTACATATGACATCCCAGAGGACATATTCTTTTCGTTTCCTGT
GAAATGCAAGGGTGGGCAGTGGAAGGTGGTGGAGGGGTTGAGCTTGTCGG
AGGAGACGAGGCGCAGGGTTTTGTCGACCGTTACCGAGTTGGTGGAAGAG
AGGGATTTGGCGCTGTCCCTTGTAGGGGGGGCATCGCACTTGTAG
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protein sequence of NO05G03790.1

>NO05G03790.1-protein ID=NO05G03790.1-protein|Name=NO05G03790.1|organism=Nannochloropsis oceanica|type=polypeptide|length=365bp
MIGHEEHNSAPTATKRVLITGGAGQIAYALLPHLISGRVFGCQTRLIVHL
LDIPGTENALRGVQMEIEDAASPVVVGLVTTTDLRTAFTGVDYAILLGGF
PRLPGMERKELLAKNVEIITTHAAALDDHASRDVKVVVVANPANTLALVA
KKRASSLPAENFSCLTRLDHDRLRGMVAKKLTSLRISSSIPECSAAITAT
QVRNVAIWGNHSSTQVPSAGQAQVELGGKWVSIHEVLQEKDAAWLHGQLV
TSVQQRGAEILAARKLSSALSAASAISKHVRDWVHGTPEGEFVSMGVFVS
KDCTYDIPEDIFFSFPVKCKGGQWKVVEGLSLSEETRRRVLSTVTELVEE
RDLALSLVGGASHL*
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Synonyms
Publications