NO05G03630, NO05G03630 (gene) Nannochloropsis oceanica

Overview
NameNO05G03630
Unique NameNO05G03630
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1217
Alignment locationchr5:956944..958160 +

Link to JBrowse

Properties
Property NameValue
DescriptionF-type H -transporting ATPase subunit gamma
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:956944..958160 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0015986ATP synthesis coupled proton transport
GO:0009058biosynthetic process
GO:0006810transport
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0046933proton-transporting ATP synthase activity, rotational mechanism
GO:0016787hydrolase activity
GO:0005215transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0045261proton-transporting ATP synthase complex, catalytic core F(1)
GO:0016020membrane
GO:0005622intracellular
Vocabulary: INTERPRO
TermDefinition
IPR035968ATP_synth_F1_ATPase_gsu
IPR000131ATPase_F1-cplx_gsu
Homology
BLAST of NO05G03630 vs. NCBI_GenBank
Match: XP_005853649.1 (F-type H+-transporting ATPase subunit gamma [Nannochloropsis gaditana CCMP526] >EKU22707.1 F-type H+-transporting ATPase subunit gamma [Nannochloropsis gaditana CCMP526] >EWM28027.1 atp synthase gamma [Nannochloropsis gaditana])

HSP 1 Score: 510.4 bits (1313), Expect = 4.000e-141
Identity = 262/281 (93.24%), Postives = 275/281 (97.86%), Query Frame = 0
Query:   24 RGMASEKEIAARIKSTTGINKITKTMKMVAASKMRGDEDRLKAGRPFQRWVDGFTPKPVLLEDFAKDIESLPQSNLLVVVTTDRGLCGGVNSSLARVLKNMVPALDKAKKDVQMFIIGDKGRATMGRPLGEFITQINSDSATPYNFSLAAALAQDVSQIKADAVHVVFNRFRSAIAYEATVKTMYPPAALTGEPYVEYEFEPDTKTEVLDDMYEMAIATTLFTSMLESAAAEQSSRMNAMENASKNGEDLIKELSIQYNRARQSRITTELVEIISGASALE 305
            RGMASEKEIAAR+KST GINKITKTMKMVAASKMRGDEDRLKAGRPFQ+WVDGFTP PVLLEDFAK ++ LPQSNLLV++TTDRGLCGGVNSSLARV+K+MVPALDK KKDVQ+FI+GDKGRATMGRPLGEFITQINSDS TPYNFSLAAALAQDV+QIKADAVHVVFNRFRSAIAYEATVKT+YPPAALTGEPYVEYEFEPDTKTEVLDDMYEMAIATT+FTSMLESAAAEQSSRMNAMENASKNGEDLIKELSIQYNRARQSRITTELVEIISGASALE
Sbjct:    4 RGMASEKEIAARMKSTAGINKITKTMKMVAASKMRGDEDRLKAGRPFQKWVDGFTPPPVLLEDFAKSLDKLPQSNLLVIITTDRGLCGGVNSSLARVMKHMVPALDKEKKDVQLFIVGDKGRATMGRPLGEFITQINSDSGTPYNFSLAAALAQDVTQIKADAVHVVFNRFRSAIAYEATVKTLYPPAALTGEPYVEYEFEPDTKTEVLDDMYEMAIATTMFTSMLESAAAEQSSRMNAMENASKNGEDLIKELSIQYNRARQSRITTELVEIISGASALE 284          
BLAST of NO05G03630 vs. NCBI_GenBank
Match: CBJ27280.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 270.8 bits (691), Expect = 5.300e-69
Identity = 148/304 (48.68%), Postives = 211/304 (69.41%), Query Frame = 0
Query:    8 HAAR--RLALGGATRIALRGMASEKEIAARIKSTTGINKITKTMKMVAASKMRGDEDRLKAGRPFQRWVDGFTPKPVLLEDFAKDIESLPQSNLLVVVTTDRGLCGGVNSSLARVLKNMVPALDKAKKDVQMFIIGDKGRATMGRPLGEFITQINSDSATPYNFSLAAALAQDVSQIKADAVHVVFNRFRSAIAYEATVKTMYPPAALTG--EPYVEYEFEPDTKTEVLDDMYEMAIATTLFTSMLESAAAEQSSRMNAMENASKNGEDLIKELSIQYNRARQSRITTELVEIISGASALEAAR 308
            HA R  R A    + +++RGMA+EK+I  RI +T  I+KIT++MKMV+A+K+RGD+ RL   +PF  W       P++ ED   D    PQ NL+V +++DRGLCGGVNS + R +K M+ +  +  K+  +F++G+KGR+ + R   + +T   +D+ TP  F +A A+A +  +   D +H+VFN F+SAIAY+ ++K++ P  A  G  E  VEYEFEPDTK EV+ DMYE  +A+ ++ S++ESA +EQSSRMNAMENASKN  ++I  L++ YNRARQSRITTEL+EIISGASALE A+
Sbjct:    4 HACRTLRQARPLGSSLSVRGMATEKQIMMRINATKNISKITQSMKMVSAAKLRGDQARLDKAQPFNAWTAELNEPPMVTED-GIDTSGWPQKNLIVAISSDRGLCGGVNSFVTRAIKKMMISTKEQGKETTLFVVGEKGRSQLSRVHADEMTAACTDATTPMQFGMATAMATEALKNDFDTMHIVFNVFKSAIAYDTSIKSL-PNLAKEGGEEQMVEYEFEPDTKEEVMQDMYEYLVASQMWHSLMESATSEQSSRMNAMENASKNAGEMIDSLTLIYNRARQSRITTELIEIISGASALEEAK 305          
BLAST of NO05G03630 vs. NCBI_GenBank
Match: GAX12305.1 (F-type H+-transporting ATPase subunit gamma [Fistulifera solaris])

HSP 1 Score: 237.7 bits (605), Expect = 5.000e-59
Identity = 137/288 (47.57%), Postives = 194/288 (67.36%), Query Frame = 0
Query:   24 RGMASEKEIAARIKSTTGINKITKTMKMVAASKMRGDEDRLKAGRPFQRWVDGFTPKPVLLEDFAKDIESLPQSNLLVVVTTDRGLCGGVNSSLARVLKNMVPALDKAKKDVQMFIIGDKGRATMGRPLGEFITQINSDSATPYNFSLAAALAQDV---SQIKADAVHVVFNRFRSAIAYEATVKTM--YPPAALTGEPYV--EYEFEPDTKTEVLDDMYEMAIATTLFTSMLESAAAEQSSRMNAMENASKNGEDLIKELSIQYNRARQSRITTELVEIISGASALE 305
            RGMA+EK+I  +I +T  I KIT +MKMV+A+K++GDE+RL    PF  W    T +P+LLED   + E LPQ  L+V  TTD+GLCGGVNS ++R +++M+  + +  KD  + ++GDKGR+ M R +G+ IT+  ++  +P  F LA+ LAQ++        DAV +V+N F +A  Y+   K +      A  GE  +  EYEF+ D K E + D+ E  +A+ +F S ++ AAAEQSSRM AMENASKN  +LI +L+++YNRARQ+RITTEL+EIISGASALE
Sbjct:   25 RGMATEKQILNQINATKNIKKITSSMKMVSAAKLKGDENRLAVAEPFNAWTYNLTSEPMLLED--ANFEGLPQKVLIVPFTTDKGLCGGVNSFISRGVRDMIKKIKEDGKDADVVVVGDKGRSQMNRSVGQHITRSLTEVLSPGTFGLASCLAQEIIAAGYEDYDAVVLVYNSFVNAAVYKQMYKVIKKLKTEAEGGEEMLMGEYEFDAD-KEEFVSDLNEFVLASQIFHSFMDGAAAEQSSRMTAMENASKNAGELIDKLTLRYNRARQARITTELIEIISGASALE 309          
BLAST of NO05G03630 vs. NCBI_GenBank
Match: GAX21089.1 (F-type H+-transporting ATPase subunit gamma [Fistulifera solaris])

HSP 1 Score: 235.0 bits (598), Expect = 3.200e-58
Identity = 136/288 (47.22%), Postives = 193/288 (67.01%), Query Frame = 0
Query:   24 RGMASEKEIAARIKSTTGINKITKTMKMVAASKMRGDEDRLKAGRPFQRWVDGFTPKPVLLEDFAKDIESLPQSNLLVVVTTDRGLCGGVNSSLARVLKNMVPALDKAKKDVQMFIIGDKGRATMGRPLGEFITQINSDSATPYNFSLAAALAQDV---SQIKADAVHVVFNRFRSAIAYEATVKTM--YPPAALTGEPYV--EYEFEPDTKTEVLDDMYEMAIATTLFTSMLESAAAEQSSRMNAMENASKNGEDLIKELSIQYNRARQSRITTELVEIISGASALE 305
            RGMA+EK+I  +I +T  I KIT +MKMV+A+K++GDE+RL    PF  W    T +P+LLED     E LPQ  L+V  TTD+GLCGGVNS ++R +++M+  + +  KD  + ++GDKGR+ M R +G+ IT+  ++  +P  F LA+ LAQ++        DAV +V+N + +A  Y+   K +      A  GE  +  EYEF+ D K E + D+ E  +A+ +F S ++ AAAEQSSRM AMENASKN  +LI +L+++YNRARQ+RITTEL+EIISGASALE
Sbjct:   25 RGMATEKQILNQINATKNIKKITSSMKMVSAAKLKGDENRLAVADPFNAWTYNLTSEPMLLED--ATFEGLPQKVLIVPFTTDKGLCGGVNSFISRGVRDMIKKIKEDGKDADVVVVGDKGRSQMNRSVGQHITRSLTEVLSPGTFGLASCLAQEIIAAGYEDYDAVVLVYNSYVNAAVYKQMYKVIKKLKTEAEGGEEMLMGEYEFDAD-KEEFVSDLNEFVLASQIFHSFMDGAAAEQSSRMTAMENASKNAGELIDKLTLRYNRARQARITTELIEIISGASALE 309          
BLAST of NO05G03630 vs. NCBI_GenBank
Match: XP_002290514.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED92266.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 234.2 bits (596), Expect = 5.500e-58
Identity = 132/283 (46.64%), Postives = 188/283 (66.43%), Query Frame = 0
Query:   26 MASEKEIAARIKSTTGINKITKTMKMVAASKMRGDEDRLKAGRPFQRWVDGFTPKPVLLEDFAKDIESLPQSNLLVVVTTDRGLCGGVNSSLARVLKNMVPALDKAKKDVQMFIIGDKGRATMGRPLGEFITQINSDSATPYNFSLAAALAQDVSQIKA---DAVHVVFNRFRSAIAYEATVKTMYP-PAALTGEPYVEYEFEPDTKTEVLDDMYEMAIATTLFTSMLESAAAEQSSRMNAMENASKNGEDLIKELSIQYNRARQSRITTELVEIISGASALE 305
            MA+EK+I  +I+ST  I KIT +MKMV+A+K++GDE R      F  W D     P  +ED     E LPQ +L++ VT+D+GLCGGVNS + R +KN V +L+   K+  + +IGDKGR  + R  G+ I    ++  +P NF+LA A+A ++    A   DAV +++N + +A  Y    K + P       EP + YEFEPDTK+EVL D++E  + + ++ S+++ AAAEQSSRM AMENASKN  ++I+ L+++YNRARQ+RITTEL+EIISGASALE
Sbjct:    1 MATEKQIWNQIQSTKNIQKITSSMKMVSAAKLKGDETRRMTAISFNTWADALNGPPKPVED--ATFEELPQKSLIISVTSDKGLCGGVNSFITRSVKNCVNSLNAQGKECDVAVIGDKGRGQLRRLHGDLIKMSLTEVESPGNFTLAGAIASELVAAGAGDYDAVVIMYNGYVNAATYHQMYKVITPFGGEGENEPLLAYEFEPDTKSEVLADLHEYLLTSQIYHSLMDGAAAEQSSRMTAMENASKNAGEMIESLTLRYNRARQARITTELIEIISGASALE 281          
BLAST of NO05G03630 vs. NCBI_GenBank
Match: XP_009531481.1 (ATP synthase gamma subunit [Phytophthora sojae] >EGZ14052.1 ATP synthase gamma subunit [Phytophthora sojae])

HSP 1 Score: 233.4 bits (594), Expect = 9.300e-58
Identity = 133/287 (46.34%), Postives = 193/287 (67.25%), Query Frame = 0
Query:   24 RGMASEKEIAARIKSTTGINKITKTMKMVAASKMRGDEDRLKAGRPFQRWVDGF--TPKPVLLEDFAKDIESLPQSNLLVVVTTDRGLCGGVNSSLARVLKNMVPALDKAKKDVQMFIIGDKGRATMGRPLGEFIT-QINSDSATPYNFSLAAALAQDVSQIKA---DAVHVVFNRFRSAIAYEATVKTMYPPAALTGEPYVEYEFEPDTKTEVLDDMYEMAIATTLFTSMLESAAAEQSSRMNAMENASKNGEDLIKELSIQYNRARQSRITTELVEIISGASALE 305
            RGMA+EK+I  RI +T+ I KITK+MKMV+A+KMRG E+R+ AGRPF  W+D         +  D    +E L   N+ VVV++DRGLCGG+NS +A+  +  +   D  +   Q+F+IGDK RA + R LG+ I   +    A+P NF++A+A+A+ V    A   + VHVV+N+F+SAI+Y  +V+++        + +  YE EPD K E+L D+ E  IAT +F  M+E++ +E+SSRM AMENA+ N EDLI  L++ YN+ARQ+RITTEL+EIISGA++L+
Sbjct:   22 RGMATEKQILQRITATSNIAKITKSMKMVSAAKMRGAENRMNAGRPFTAWLDNVKGAHDRTIETDGVAPVEELEGDNVFVVVSSDRGLCGGINSGIAKTTRKQI---DGVQDHSQIFVIGDKARAQLRRDLGDNIRGNVTETYASPPNFTVASAIAEAVVATAASDSEKVHVVYNKFKSAISYLPSVRSL--AVQPDSDAFDLYELEPDNKDELLADLKEFEIATAIFQGMIENSTSEESSRMAAMENATTNAEDLIGSLTLVYNKARQARITTELIEIISGAASLD 303          
BLAST of NO05G03630 vs. NCBI_GenBank
Match: EJK45532.1 (hypothetical protein THAOC_35849 [Thalassiosira oceanica])

HSP 1 Score: 233.4 bits (594), Expect = 9.300e-58
Identity = 132/288 (45.83%), Postives = 184/288 (63.89%), Query Frame = 0
Query:   21 IALRGMASEKEIAARIKSTTGINKITKTMKMVAASKMRGDEDRLKAGRPFQRWVDGFTPKPVLLEDFAKDIESLPQSNLLVVVTTDRGLCGGVNSSLARVLKNMVPALDKAKKDVQMFIIGDKGRATMGRPLGEFITQINSDSATPYNFSLAAALAQDVSQIKA---DAVHVVFNRFRSAIAYEATVKTMYPPAA-LTGEPYVEYEFEPDTKTEVLDDMYEMAIATTLFTSMLESAAAEQSSRMNAMENASKNGEDLIKELSIQYNRARQSRITTELVEIISGASALE 305
            +  RGM +EK++A +I ST  I KIT +MKMV+++K++GDE R      F  W +     P  LED     E LPQ  L+V V +D+GLCGGVNS + + +KN +  L    KD  + +IGDKGR  + R   + I    ++   P N++LA A+A ++    A   DAV +++N F +A  Y    K + P A     EP + YEFEPDTK+EVL D+ E  + + ++ SM+++AAAEQ SRM AMENASKN  ++I+ L++QYNRARQ+RITTEL+EIISGASALE
Sbjct:   11 VIARGMVTEKQLAVQIASTKNIEKITSSMKMVSSAKLKGDEKRRATAIAFNTWAEALNGPPTPLED--ATFEELPQKTLIVPVCSDKGLCGGVNSFITKSVKNCIVQLQNQGKDCDLVVIGDKGRGQLRRVHADKIIMTLTELEAPKNYTLAGAIASELIAKGAADYDAVVIMYNTFVNAATYTQMYKVIKPFAGDGEDEPLLAYEFEPDTKSEVLVDLQEYLLTSQIYHSMMDAAAAEQGSRMTAMENASKNANEMIESLTLQYNRARQARITTELIEIISGASALE 296          
BLAST of NO05G03630 vs. NCBI_GenBank
Match: GAX96121.1 (ATP synthase F1, gamma subunit [Pythium insidiosum])

HSP 1 Score: 232.6 bits (592), Expect = 1.600e-57
Identity = 139/302 (46.03%), Postives = 201/302 (66.56%), Query Frame = 0
Query:   23 LRGMASEKEIAARIKSTTGINKITKTMKMVAASKMRGDEDRLKAGRPFQRWV-------------DGFTPKPVLLEDFAKDIESLPQSNLLVVVTTDRGLCGGVNSSLARVLKNMVPALDKAKKDVQMFIIGDKGRATMGRPLGEFITQINSDSATPY----NFSLAAALAQD-VSQIKAD--AVHVVFNRFRSAIAYEATVKTMYPPAALTGEPYVEYEFEPDTKTEVLDDMYEMAIATTLFTSMLESAAAEQSSRMNAMENASKNGEDLIKELSIQYNRARQSRITTELVEIISGASALE 305
            +RGMA+EK+I  RI ST+ I KITK+MKMV+A+KMRG E RL  GRPF  W+             DGF PK        +D+E+   SN+ VVV++DRGLCGG+NS +A+ ++  +  +DK+K    +F+IGDKGRA + R   +F  QI   +   Y     F++A+A+A+  V+  K D   VHV+FN+F SAIAY+ +++++    A   + +  YE EPD++ EVL D+ E  IAT +F  ++E+A +E+SSRM AMENA+ N ++LI  L++ YN+ARQ+RITTEL+EIISGAS+L+
Sbjct:   20 VRGMATEKQILLRIGSTSNIAKITKSMKMVSAAKMRGAETRLNGGRPFAAWLDNVSSGKYRVIEKDGFVPK--------EDVEA-NDSNVFVVVSSDRGLCGGINSGIAKSVRKQLANVDKSK--ASLFVIGDKGRAQLRR---DFSEQIRGSATEAYVNAPTFTVASAIAEAIVASAKDDNEKVHVIFNKFVSAIAYQPSIRSL--GVAADSDDFTAYEIEPDSEAEVLADLKEFEIATAVFHGIVENATSEESSRMTAMENATSNAQELISSLTLVYNKARQARITTELIEIISGASSLD 305          
BLAST of NO05G03630 vs. NCBI_GenBank
Match: XP_002899107.1 (ATP synthase subunit gamma, putative [Phytophthora infestans T30-4] >EEY62471.1 ATP synthase subunit gamma, putative [Phytophthora infestans T30-4])

HSP 1 Score: 232.3 bits (591), Expect = 2.100e-57
Identity = 130/287 (45.30%), Postives = 195/287 (67.94%), Query Frame = 0
Query:   24 RGMASEKEIAARIKSTTGINKITKTMKMVAASKMRGDEDRLKAGRPFQRWVDGF--TPKPVLLEDFAKDIESLPQSNLLVVVTTDRGLCGGVNSSLARVLKNMVPALDKAKKDVQMFIIGDKGRATMGRPLGEFIT-QINSDSATPYNFSLAAALAQDV---SQIKADAVHVVFNRFRSAIAYEATVKTMYPPAALTGEPYVEYEFEPDTKTEVLDDMYEMAIATTLFTSMLESAAAEQSSRMNAMENASKNGEDLIKELSIQYNRARQSRITTELVEIISGASALE 305
            RGMA+EK+I  RI +T+ I KITK+MKMV+A+KMRG E+R+ AGRPF  W+D         +  D    +E L   N+L+VV++DRGLCGG+NS +A+  +  +  ++      Q+F+IGDK RA + R LG+ I   +     +P NF++A+A+A+ V   S  +++ VHV++N+F+SAI+Y  +V+++        + +  YE EPD K E+L D+ E  IAT +F  M+E++ +E+SSRM AMENA+ N EDLI  L++ YN+ARQ+RITTEL+EIISGA++L+
Sbjct:   22 RGMATEKQILQRITATSNIAKITKSMKMVSAAKMRGAENRMNAGRPFTAWLDNVKGAHDRTVETDGVAPVEELEGDNVLIVVSSDRGLCGGINSGIAKTTRRQIAGVEDHS---QVFVIGDKARAQLRRDLGDNIRGNVTETYQSPPNFTVASAIAEAVVASSPSESEKVHVLYNKFKSAISYMPSVRSL--AVQPDSDAFDLYELEPDNKDELLADLKEFEIATAIFQGMIENSTSEESSRMAAMENATTNAEDLIGSLTLVYNKARQARITTELIEIISGAASLD 303          
BLAST of NO05G03630 vs. NCBI_GenBank
Match: XP_024578420.1 (atp synthase gamma subunit [Plasmopara halstedii] >CEG42051.1 atp synthase gamma subunit [Plasmopara halstedii])

HSP 1 Score: 230.7 bits (587), Expect = 6.100e-57
Identity = 129/287 (44.95%), Postives = 192/287 (66.90%), Query Frame = 0
Query:   24 RGMASEKEIAARIKSTTGINKITKTMKMVAASKMRGDEDRLKAGRPFQRWVDGF--TPKPVLLEDFAKDIESLPQSNLLVVVTTDRGLCGGVNSSLARVLKNMVPALDKAKKDVQMFIIGDKGRATMGRPLGEFIT-QINSDSATPYNFSLAAALAQDV---SQIKADAVHVVFNRFRSAIAYEATVKTMYPPAALTGEPYVEYEFEPDTKTEVLDDMYEMAIATTLFTSMLESAAAEQSSRMNAMENASKNGEDLIKELSIQYNRARQSRITTELVEIISGASALE 305
            RGMA+EK+I  RI +T+ I KITK+MKMV+A+KMRG E+R+ AGRPF  W+D         +  D    I+ L   NL VVV++DRGLCGG+NS +A+  +  +  ++      Q+F+IGDK RA + R L   I   +     +P NF++A+A+A+ +   S  +++ VHV++N+F+SAI+Y  +V+++        + +  YE EPD K E+L D+ E  IAT +F  M+E++ +E+SSRM AMENA+ N EDLI  L++ YN+ARQ+RITTEL+EIISGA++L+
Sbjct:   22 RGMATEKQILQRITATSNIAKITKSMKMVSAAKMRGAENRMNAGRPFTAWIDNVKGAQNRTIETDGVAPIKELEGDNLFVVVSSDRGLCGGINSGIAKTTRKQIAGVE---DHTQIFVIGDKARAQLRRDLASNIRGNVTETYQSPPNFTVASAIAEAIMASSSSESEKVHVIYNKFKSAISYLPSVRSL--AVQPDSDAFDLYELEPDNKDELLADLKEFEIATAVFQGMIENSTSEESSRMAAMENATTNAEDLIGSLTLVYNKARQARITTELIEIISGAASLD 303          
The following BLAST results are available for this feature:
BLAST of NO05G03630 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005853649.14.000e-14193.24F-type H+-transporting ATPase subunit gamma [Nanno... [more]
CBJ27280.15.300e-6948.68conserved unknown protein [Ectocarpus siliculosus][more]
GAX12305.15.000e-5947.57F-type H+-transporting ATPase subunit gamma [Fistu... [more]
GAX21089.13.200e-5847.22F-type H+-transporting ATPase subunit gamma [Fistu... [more]
XP_002290514.15.500e-5846.64predicted protein [Thalassiosira pseudonana CCMP13... [more]
XP_009531481.19.300e-5846.34ATP synthase gamma subunit [Phytophthora sojae] >E... [more]
EJK45532.19.300e-5845.83hypothetical protein THAOC_35849 [Thalassiosira oc... [more]
GAX96121.11.600e-5746.03ATP synthase F1, gamma subunit [Pythium insidiosum... [more]
XP_002899107.12.100e-5745.30ATP synthase subunit gamma, putative [Phytophthora... [more]
XP_024578420.16.100e-5744.95atp synthase gamma subunit [Plasmopara halstedii] ... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL085nonsL085Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR120ngnoR120Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR117ngnoR117Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003496NSK003496Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G03630.1NO05G03630.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|584816gene_3171Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100008g4gene2525Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G03630.1NO05G03630.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G03630 ID=NO05G03630|Name=NO05G03630|organism=Nannochloropsis oceanica|type=gene|length=1217bp
ATGTCTGCCAGTCTAGGTTTGCACGCCGCCCGCCGTTTGGCGCTGGGCGG
GGCGACCAGgtatgtgatcaaagcaagaggagggagaggggagtgctctc
ggcccgtctgcattggtgtgtgaaagagatggtagcgtcttgcgtgtata
gcgtacaatgtatacaagtagagagagaagagggagaatgtcctcctcct
ggttttctgaagcctcggcgtacgcatttcgcatcctcccttcctccctc
cctcctgtcatgtcttaacccgcttttctatctctaccttcctcactctt
cccgcacaactcacctccataaccgtccctcactatcctctttcaatata
agGATTGCGCTGCGTGGTATGGCCTCAGAGAAGGAGATTGCCGCTCGCAT
CAAGTCCACGACGGGCATCAACAAGATCACCAAGACGATGAAGATGGTGG
CTGCCTCCAAAATGCGCGGTGACGAGGACCGTCTCAAGGCAGGGCGTCCC
TTCCAGAGGTGGGTGGATGGCTTCACGCCCAAGCCCGTTCTCCTGGAGGA
TTTCGCCAAGGATATTGAGAGCTTGCCGCAATCCAACTTGTTGGTCGTCG
TGACCACCGACCGTGGCCTGTGTGGTGGAGTCAACTCATCTCTGGCCCGT
GTGTTGAAGAACATGGTTCCGGCTTTGGACAAGGCGAAAAAGGACGTGCA
GATGTTCATCATTGGTGACAAGGGGCGTGCTACGATGGGCCGGCCCCTGG
GGGAGTTCATCACGCAGATTAACTCGGATTCGGCTACTCCCTACAACTTT
TCTCTCGCTGCGGCCTTGGCGCAGGATGTGAGCCAGATCAAGGCGGATGC
TGTGCATGTGGTGTTTAATCGTTTCCGGTCCGCCATCGCCTATGAAGCGA
CGGTCAAGACGATGTACCCGCCTGCGGCGTTGACAGGAGAGCCCTATGTG
GAGTACGAGTTTGAGCCTGACACCAAGACGGAGGTACTTGACGACATGTA
CGAGATGGCGATAGCGACGACTCTTTTCACCAGCATGTTGGAAAGTGCCG
CGGCCGAGCAGAGCTCCCGGATGAATGCCATGGAGAACGCTTCGAAGAAC
GGGGAGGATTTGATCAAGGAGCTGTCGATTCAGTATAACAGGGCGCGGCA
GTCGAGGATTACCACGGAGCTTGTGGAGATCATTTCGGGAGCGTCGGCGC
TGGAGGCGGCGCGTTAA
back to top

protein sequence of NO05G03630.1

>NO05G03630.1-protein ID=NO05G03630.1-protein|Name=NO05G03630.1|organism=Nannochloropsis oceanica|type=polypeptide|length=308bp
MSASLGLHAARRLALGGATRIALRGMASEKEIAARIKSTTGINKITKTMK
MVAASKMRGDEDRLKAGRPFQRWVDGFTPKPVLLEDFAKDIESLPQSNLL
VVVTTDRGLCGGVNSSLARVLKNMVPALDKAKKDVQMFIIGDKGRATMGR
PLGEFITQINSDSATPYNFSLAAALAQDVSQIKADAVHVVFNRFRSAIAY
EATVKTMYPPAALTGEPYVEYEFEPDTKTEVLDDMYEMAIATTLFTSMLE
SAAAEQSSRMNAMENASKNGEDLIKELSIQYNRARQSRITTELVEIISGA
SALEAAR*
back to top
Synonyms
Publications