NO05G03550, NO05G03550 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G03550 vs. NCBI_GenBank
Match: WP_080502662.1 (hypothetical protein [Neochlamydia sp. EPS4]) HSP 1 Score: 198.0 bits (502), Expect = 8.100e-47 Identity = 164/561 (29.23%), Postives = 255/561 (45.45%), Query Frame = 0 Query: 13 NPREAAYLAALAADREQAFISDALSEWADAKEPSASEMGLATLIANVACREANSLDYAIGVLAKGGGDGAKEEKGKKREKSVRLKGRQRVVLRTALAQYKYCTRTPLYAIVDHAVECAKQYGGGPSFGAFTNALLRKLPPDPTTDRNDGARQHQQQREQQYLVFSAEEGDGSDTRPLPLPKGHSEEALAVRLSYPPFLVHLFIEEFGKAKAKLIMEAGNTFPPTMLRSRAADAAAPVLPLAGSDTREEEHESASAAAPVAGPAPMSGASKSLKLPWTTVNNLPPALHTPLPLPYTLGVVRSEKLFRQLTQDEGWYVTNGTPAGLLARLAQGAVARVFGSDDAGKGTREGGLRVLDLCAAPGGKGLAVWDVIREGQGHHTLALVMNDVNEEKTGRIRENLSKFGLEDKIHLTIGDGLTLTREELGRQMGSNIEGEGGKEEGGFDVVILDAPCSNAGVLGRRPEARWRLRDEALLRELEETQFSLLKHASEELLSGTSPRGEIWYMTCSILKGEDEGMVERACRELGLEVVVEGGKDLMMKVLPGEGQGGAFDGGFGCALRRR 574 N REAA+ A L + + ++FIS+ L EW ++PS+ + LA IA + + A +LDY L++ +K +RLK +++ +LRTAL Q+ + + P YAIVD +++ AK++ F A+ NA+LRK L LP+G +L++R S+P + + + +G I+EA N TM R R V PA W+TV P + T V SE +++ +Y+ N TPA L+ L+Q G + +LD+CA+PGGK LA+ D + AL NDV+ +K ++++N +K+G++ ++ + G+ L L ++ FD+++LD PCSN+GVL +RPEARWRL ++ ++L+ Q +LLKHA L GEIWYMTCSIL E+E +V AC+EL L K + +LP +DGGF C L ++ Sbjct: 30 NSREAAFFALLHSLKGESFISEYLGEWFKKEQPSSQDYQLAHQIAYGSAQMALTLDYLALQLSE--------------KKKMRLKLKEKALLRTALYQFYFLDKLPHYAIVDESIKIAKKHFHS-YFVAYLNAILRKF----------------------------------SLLSLTLPQGMDLPSLSIRYSFPLYFIKNLSKYYGLQATTKILEASNKPALTMARLRNI---------------------------VEIPA-----------EWSTVIEEPVKVIT---------VPASE--VKRVASSADYYIQNVTPASLIGNLSQ--------------GISKAPTSILDICASPGGKTLALHDFFPQA------ALYANDVSLQKIQKLKDNFAKYGVQAQVSCSEGEKLELDKK--------------------FDLIVLDVPCSNSGVLSKRPEARWRLNEDQ-AKQLKIIQLNLLKHAVHLL----ENEGEIWYMTCSILPEENEEIVALACQELDLI------KKNFISILP---NAEGWDGGFACCLVKK 438
BLAST of NO05G03550 vs. NCBI_GenBank
Match: OJV11239.1 (hypothetical protein BGO14_09680 [Chlamydiales bacterium 38-26]) HSP 1 Score: 194.5 bits (493), Expect = 9.000e-46 Identity = 168/559 (30.05%), Postives = 253/559 (45.26%), Query Frame = 0 Query: 13 NPREAAYLAALAADREQAFISDALSEWADAKEPSASEMGLATLIANVACREANSLDY-AIGVLAKGGGDGAKEEKGKKREKSVRLKGRQRVVLRTALAQYKYCTRTPLYAIVDHAVECAKQYGGGPSFGAFTNALLRKLPPDPTTDRNDGARQHQQQREQQYLVFSAEEGDGSDTRPLPLPKGHSEEALAVRLSYPPFLVHLFIEEFGKAKAKLIMEAGNTFPPTMLRSRAADAAAPVLPLAGSDTREEEHESASAAAPVAGPAPMSGASKSLKLPWTTVNNLPPALHTPLPLPYTLGVVRSEKLFRQLTQDEGWYVTNGTPAGLLARLAQGAVARVFGSDDAGKGTREGGLRVLDLCAAPGGKGLAVWDVIREGQGHHTLALVMNDVNEEKTGRIRENLSKFGLEDKIHLTIGDGLTLTREELGRQMGSNIEGEGGKEEGGFDVVILDAPCSNAGVLGRRPEARWRLRDEALLRELEETQFSLLKHASEELLSGTSPRGEIWYMTCSILKGEDEGMVERACRELGLEVVVEGGKDLMMKVLPGEGQGGAFDGGFGCAL 571 N REAA+LA L + R + +ISD L +W ++P A + LA IA + + A +LD+ A+ V K K V LK +++ +LRTAL Q + R P YAIVD ++ AK Y F ++ NA+LRK S L LP+ + +L++R S+P V + +G+ K I+ A N P M+ A + P S + W ++ + PLP+ ++ ++F+ + + +Y+ N TP L+++L + +LD+CAAPGGK LAV D E + L NDV+E+K +++EN K+ ++ + +G + E FD++ILD PCSN+GVL +RPEARWRL +E ++LE+TQ+ LL+ A L PRG+IWYMTCSIL E+E MVE+ACRELG + E + L++ L G +DGGF L Sbjct: 2 NSREAAFLALLHSLRGERYISDYLEDWFIQEKPHAQDYHLAQQIAYGSAQMALALDFLALQVSEK---------------KKVHLKLKEKALLRTALYQIYFLNRVPHYAIVDETIKVAKNY-FHKYFVSYLNAILRK----------------------------------SVDIELKLPQQNDASSLSIRYSFPTSYVSELLHHYGEEKTLEILRASN-HPAVMM------------------------------ARLRNPTESS-------IDWISI------IKHPLPVV----IIPPIEMFK-IVKSSDFYIQNVTPVQLISQLCEKLTI--------------PPQSILDMCAAPGGKSLAVHDFFPEAE------LFANDVSEDKLMKLKENFQKYEIQAHVLCNLGQDIAF--------------------EEKFDLIILDVPCSNSGVLNKRPEARWRLNEEN-SQQLEKTQWGLLEKAKTLL----KPRGQIWYMTCSILPQENERMVEKACRELGFK---ELHRQLILPNLEG------WDGGFASCL 407
BLAST of NO05G03550 vs. NCBI_GenBank
Match: WP_079978104.1 (hypothetical protein [Parachlamydiaceae bacterium HS-T3]) HSP 1 Score: 175.3 bits (443), Expect = 5.600e-40 Identity = 163/565 (28.85%), Postives = 237/565 (41.95%), Query Frame = 0 Query: 6 ISPTQAKNPREAAYLAALAADREQAFISDALSEWADAKEPSASEMGLATLIANVACREANSLDYAIGVLAKGGGDGAKEEKGKKREKSVRLKGRQRVVLRTALAQYKYCTRTPLYAIVDHAVECAKQYGGGPSFGAFTNALLRKLPPDPTTDRNDGARQHQQQREQQYLVFSAEEGDGSDTRPLPLPKGHSEEALAVRLSYPPFLVHLFIEEFGKAKAKLIMEAGNTFPPTMLRSRAADAAAPVLPLAGSDTREEEHESASAAAPVAGPAPMSGASKSLKLPWTTVNNLPPALHTPLPLPYTLGVVRSEKLFRQLTQDEGWYVTNGTPAGLLARLAQGAVARVFGSDDAGKGTREGGLRVLDLCAAPGGKGLAVWDVIREGQGHHTLALVMNDVNEEKTGRIRENLSKFGLEDKIHLTIGDGLTLTREELGRQMGSNIEGEGGKEEGGFDVVILDAPCSNAGVLGRRPEARWRLRDEALLRELEETQFSLLKHASEELLSGTSPRGEIWYMTCSILKGEDEGMVERACRELGLEVVVEGGKDLMMKVLPGEGQGGAFDGGFGCAL 571 +S + NPREAA+LA +A++++AFI D L++W P + LA IA R +LD+ + L K + LK + ++LR+A+ Q R PLYA+V+ AVE AK+Y P F NALLRK +T L P+G + + L++R SYP L+ +++F A+ + ++ AGN PP M R R+A +L + SD E++ S+S +Y+ N TPA L LA F RVLDLC++PGGK + D + L NDV+E K RI+ENL+K+ + + + LT + FD++I D PCSN GV+ +RPEARWR E L EL+ +L A E L + RG++W MTCSIL+ E++ +V AC+E L+ + +LP E QG DGGF L Sbjct: 33 VSSQKLSNPREAAFLALYSAEKQEAFIEDWLNQWHQKNHPKEVDWRLAQEIAFGTMRMKLTLDHFLLQL--------------NAYKKISLKLKPLLILRSAIYQLTMLDRVPLYAVVNEAVELAKKYCSSP-IARFINALLRK----------------------------------HETILLKRPEGITAKGLSIRFSYPEELIQHLLKQFTLAETQQVLAAGNLPPPLMARKRSAKNLEMIL-FSSSDI--EKYASSSE----------------------------------------------------------YYIQNSTPALLFHHLAN---QESFNPH-----------RVLDLCSSPGGKLILAHDYFPQA------TLFANDVSEIKLERIKENLAKYQIPAYLSHGPAEQYPLTTK--------------------FDLIIADIPCSNTGVMNKRPEARWRF-SETSLSELKMLAHRILARAVELL----NERGKLWLMTCSILREENQVLVSSACKEFSLQCTHQ------ELILPDE-QGR--DGGFAAEL 433
BLAST of NO05G03550 vs. NCBI_GenBank
Match: PIS01742.1 (hypothetical protein COT84_00880 [Chlamydiae bacterium CG10_big_fil_rev_8_21_14_0_10_35_9]) HSP 1 Score: 146.7 bits (369), Expect = 2.100e-31 Identity = 147/558 (26.34%), Postives = 229/558 (41.04%), Query Frame = 0 Query: 15 REAAYLAALAADREQAFISDALSEWADAKEPSASEMGLATLIANVACREANSLDYAIGVLAKGGGDGAKEEKGKKREKSVRLKGRQRVVLRTALAQYKYCTRTPLYAIVDHAVECAKQYGGGPSFGAFTNALLRKLPPDPTTDRNDGARQHQQQREQQYLVFSAEEGDGSDTRPLPLPKGHSEEALAVRLSYPPFLVHLFIEEFGKAKAKLIMEAGNTFPPTMLRSRAADAAAPVLPLAGSDTREEEHESASAAAPVAGPAPMSGASKSLKLPWTTVNNLPPALHTPLPLPYTLGVVRSEKLFRQLTQDEGWYVTNGTPAGLLARLAQGAVARVFGSDDAGKGTREGGLRVLDLCAAPGGKGLAVWDVIREGQGHHTLALVMNDVNEEKTGRIRENLSKFGLEDKIHLTIGDGLTLTREELGRQMGSNIEGEGGKEEGGFDVVILDAPCSNAGVLGRRPEARWRLRDEALLRELEETQFSLLKHASEELLSGTSPRGEIWYMTCSILKGEDEGMVERACRELGLEVVVEGGKDLMMKVLPGEGQGGAFDGGFGCALRR 573 R A+ A L +++ + + L EW P E LA +A + R +LD+ LA +LK R++++LR A+ Q+ + + PLYA+V+ V+ AK+ F NA LRKL +T P SE+ L + SYP L+ LF++E+G +++ N M+R R + L+ + R + W L ++ E++ +L +Y+ N TP L+ L+ +G R+LDLCAAPGGK L D+ E Q L ND++E + ++ EN+SK+ LE + SN E FD++I+DAPCSN GVL +R EAR+ + + L+ L + Q+ ++K+A L + G+IW+MTCSIL E+E +E+ + L+V GK KVLP + +DGGFGC L+R Sbjct: 19 RYGAFYALLEYEKKGRKVENTLREWLKQASPKKEEYNLAQELAYGSIRRKITLDFYAFQLAS------------------KLKLREKLLLRLAIYQFLFAKKIPLYALVNETVDLAKK-NISLETSKFFNATLRKL----------------------------------ETAKFKEP---SEKDLEKKYSYPKVLIDLFVKEYGLVDTIELLKVMNEPAKVMVRKR---GIVQDITLSKEEARVIHQKK-----------------------W-----------------QVLEIINKERI-SELVDSPEYYIQNVTPVFLMENLSLKV---------------KGPQRILDLCAAPGGKLLMAADLYPEAQ------LFANDISEGRLKKLEENISKYHLEAVV--------------------SNQPAEKMHNNKKFDLIIVDAPCSNTGVLHKRCEARYVITKDH-LKGLAKLQYEIMKNAFNLL----ADEGKIWFMTCSILSSENESFIEKILQNFPLQV---DGK--FHKVLPTK---EGWDGGFGCVLKR 422
BLAST of NO05G03550 vs. NCBI_GenBank
Match: XP_005537967.1 (similar to RNA methyltransferase [Cyanidioschyzon merolae strain 10D] >BAM81931.1 similar to RNA methyltransferase [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 146.0 bits (367), Expect = 3.700e-31 Identity = 168/569 (29.53%), Postives = 242/569 (42.53%), Query Frame = 0 Query: 31 FISDALSEWADAKEPSASEMGLATLIANVACREANSLDYAIGVLAKGGGDGAKEEKGKKREKSVRLKGRQRVVLRTALAQYKYCTRTPLYAIVDHAVECAKQYGGGPSFGAFTNALLRKLPPDPTTDRNDGARQHQQQREQQYLVFSAEEGDGSDTRPLPLPKGHSEEALAVRLSYPP-FLVHLFIEEFGKAKAKLIMEAGNTFPPTMLRSRAADAAAPVLPLAGSDTREEEHESASAAAPVAGPAPMS--GASKSLKLPWTTVN------NLPPALHTPLPLPYTLGV--------VRSEKLFRQLTQDEGWYVTNGTPAGLLARLAQGAVARVFGSDDAGKGTREGGL-RVLDLCAAPGGKGLAVWDVIREGQ-GHHTLALVMNDVNEEKTGRIRENLSKF-GL-EDKIHLTIGDGLTLTREELGRQMGSNIEGEGGKEEGGFDVVILDAPCSNAGVLGRRPEARWRLRDE---ALLRELEETQFSLLKHASEELLSGTSPRGEIWYMTCSILKGEDEGMVERACRELGLEVVVEGGKD--LMMKVLPGEGQGGAFDGGFGCALRRR 574 ++ L+ W++ +PS E LA +IA A R+ DY + +E + + + + L QR +L TALAQY + R P+Y IV VE AK Y G F AF NA+LR L A + +R Y+V RPLP P +AL VR SYP F +F + + + +EAGN P T LR A +HE A P S +++++ PW P PL LP G V + LF++L Q + N T A L + R +E + RVLDLC APGGK AV++ ++ G + D+++++ + EN+ K G+ E ++ + + G + G + S E FD+VI D PC+N+GVL RRPEARWRL ++ + + L Q SLL A LLS R ++YMTCS+L E +V V+E +D L+ L G DGG+ L RR Sbjct: 120 YLLTQLALWSEKHKPSRVEYALAKIIAFNAVRQRALFDYVLQTNIVRDRSAIDQEPHRIKSEGMHLSIAQRALLHTALAQYAFMERVPVYTIVFSTVEIAKTY-FGQRFAAFANAILRNL----VRYGEKYAADLESRRPASYIV-----------RPLPFP----ADALDVRYSYPAVFASRVFGQLLNRKRLVAFLEAGNMTPQTFLRVPRQHA---------------QHEDLKMAIERRLLVPWSDQDSTETVSRPWIIYRVDLQCAGEDPGAALPLTLPSANGTGWADDPANVLTRSLFQRLLQH--FIAQNVTQAEHTFLLCEQLRQR---------WDKERRIARVLDLCTAPGGKLTAVFEYLQYSDLGDAQTEYIGIDLSDQRIHMVHENVDKTPGMRESRVFVGVARGESFVDCRAGNILRSEDE---RAVSPCFDLVIADVPCTNSGVLNRRPEARWRLDEQHFASSVPRLVSLQASLLNRAC--LLS----RSAVFYMTCSVLHAEGRDLVRS---------VLENHRDFELVWDHLTYTDAAGR-DGGYAAMLWRR 623
BLAST of NO05G03550 vs. NCBI_GenBank
Match: WP_088222889.1 (methyltransferase domain-containing protein [Chlamydiales bacterium SCGC AB-751-O23] >SCA58787.1 Uncharacterized protein AB751O23_AO_00180 [Chlamydiales bacterium SCGC AB-751-O23]) HSP 1 Score: 117.9 bits (294), Expect = 1.100e-22 Identity = 76/208 (36.54%), Postives = 109/208 (52.40%), Query Frame = 0 Query: 365 VLDLCAAPGGKGLAVWDVIREGQGHHTLALVMNDVNEEKTGRIRENLSKFGLEDKIHLTIGDGLTLTREELGRQMGSNIEGEGGKEEGGFDVVILDAPCSNAGVLGRRPEARWRLRDEALLRELEETQFSLLKHASEELLSGTSPRGEIWYMTCSILKGEDEGMVERACRELGLEVVVEGGKDLMMKVLPGEGQGGAFDGGFGCALRR 573 +LDLCAAPGGK + D+ + ++ L MND+++ KT I+ENL + L+ + + L GK+ FD+V+LD PCSN GVL +RPEARWRL D L +L++ Q +L+HAS+ + P G + +MTCS+L E+E V +E K L K L QG FDGGFG +++ Sbjct: 256 LLDLCAAPGGKSFLIKDL------YESIDLYMNDLDDHKTSIIKENLERLKLDAVLSQSPAQHFPL-----------------GKQ---FDLVLLDVPCSNTGVLHKRPEARWRLEDPQNLLDLKKQQKQILQHASQLV----KPEGHLIFMTCSLLPSENEQQVRGFLKE------HPNYKLLKQKTLLPSSQG--FDGGFGALMKK 425
BLAST of NO05G03550 vs. NCBI_GenBank
Match: OHB63715.1 (hypothetical protein A2Y76_04270 [Planctomycetes bacterium RBG_13_60_9]) HSP 1 Score: 117.1 bits (292), Expect = 1.800e-22 Identity = 126/471 (26.75%), Postives = 196/471 (41.61%), Query Frame = 0 Query: 103 VLRTALAQYKYCTRTPLYAIVDHAVECAKQYGGGPSFGAFTNALLRKLPPDPTTDRNDGARQHQQQREQQYLVFSAEEGDGSDTRPLPLPKGHSEEALAVRLSYPPFLVHLFIEEFGKAKAKLIMEAGNTFPPTMLRSRAADAAAPVLPLAGSDTREEEHESASAAAPVAGPAPMSGASKSLKLPWTTVNNLPPALHTPLPLPYTLGVVRSEKLFRQLTQDEGWYVTNGTPAGLLARLAQGAVARVFGSDDAGKGTREGGLRVLDLCAAPGGKGLAVWDVIREGQGHHTLALVMNDVNEEKTGRIRENLSKFGLEDKIHLTIGDGLTLTREELGRQMGSNIEGEGGKEEGGFDVVILDAPCSNAGVLGRRPEARWRLRDEALLRELEETQFSLLKHASEELLSGTSPRGEIWYMTCSILKGEDEGMVERACRELGLEVVVEGGKDLMMKVLPGEGQGGAFDGGFGCALRRR 574 +LR A+ + Y TP+Y+IV+ AV Q GG G F NA+LR++ T + D A + ++ LV + + G DT LP P+ L+ S P +L ++++FG +A+ I A N P +R V PL T +E E A A P P G + P T LP G + L+ V N P G +LDLC+APG K + +V R+ + ++ D++ ++ R+REN+++ GL+ +T+ Q + + FD ++LDAPCSN GVL RR EAR+R+R +A ++E+ TQ +LL A+ P G I Y TCSI + E++ + E E+ E +++ + DG + L RR Sbjct: 80 ILRIAVYELAYSPATPVYSIVNEAVNNVGQAGGKKQTG-FANAVLRQVVRHITDRQTDPATANPRRT----LVQTPQTGCQFDTDFLPDPETSLPAYLSTCFSLPLWLTGDWLDQFGSRQARAICLACNRRPSLYVR---------VNPL--RTTAQELLERFEQAGVHAEPVPSDG----------MIRIAGPHAVTQLP-----GFAEGLFTVQDLSASTAVRVLNPQP----------------------------GWLILDLCSAPGTKTTQLAEVTRD-----SASITATDIDPQRLERVRENITRLGLK---------SVTIIPHAQLEQGNTKL----------FDAILLDAPCSNTGVLARRVEARFRVRRKA-VQEIAATQKALLAKAA----GLVKPGGRICYSTCSIQRQENQAVAEFLAESSRFELARE-------ELILPSAEAFDHDGAYVALLTRR 455
BLAST of NO05G03550 vs. NCBI_GenBank
Match: WP_011195479.1 (16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB [Symbiobacterium thermophilum] >BAD40334.1 conserved hypothetical protein [Symbiobacterium thermophilum IAM 14863]) HSP 1 Score: 111.7 bits (278), Expect = 7.700e-21 Identity = 142/521 (27.26%), Postives = 200/521 (38.39%), Query Frame = 0 Query: 15 REAAYLAALAADREQAFISDALSEWADAKEPSASEMGLATLIANVACREANSLDYAIGVLAKGGGDGAKEEKGKKREKSVRLKGRQRVVLRTALAQYKYCTRTPLYAIVDHAVECAKQYGGGPSFGAFTNALLRKLPPDPTTDRNDGARQHQQQREQQYLVFSAEEGDGSDTRPLPLPKGHSEEALAVRLSYPPFLVHLFIEEFGKAKAKLIMEAGNTFPPTMLRSRAADAAAPVLPLAGSDTREEEHESASAAAPVAGPAPMSGASKSLKLPWTTVNNLPPALHTPLPLPYTLGVVRSEKLFRQLTQDEGWYVTNGTPAGLLARLAQGAVARVFGSDD-----AGKGTREGGLRVLDLCAAPGGKGLAVWDVIREGQGHHTLALVMNDVNEEKTGRIRENLSKFGLEDKIHLTIGDGLTLTREELGRQMGSNIEGEGGKEEGGFDVVILDAPCSNAGVLGRRPEARWRLRDEALLRELEETQFSLLKHASEELLSGTSPRGEIWYMTCSILKGEDEGMVE 531 REAA A D + A+ + AL + E LAT +A R +LD+AIG +A + EK + R +LR A Q Y R P A VD AVE A+QY G F N +LR L R G P P ALAV+ SYP +LV ++E FG+ +A ++EAGN PP +R A TREE A+AA G P H+P +G + + T A L RL + D+ A + G V+D+ AAPGGK + +++ + +G ++ D++ K I EN + G TI + + L +G M D V+ D PCS G L RRP+ARWR E + L Q ++L+ A++ L P G + Y TC+I E+E +VE Sbjct: 13 REAALRALYDVDIKAAYANLALDHHLSRSQLDGRERALATELAYGVTRRRATLDWAIGQVA-----------ARPLEK---MDPWVRNILREAAYQILYMDRIPPAAAVDQAVELARQY-GHEGVAKFVNGVLRNL-----IRRLPGL-------------------------PWPDEAADPVRALAVQHSYPEWLVAQWLERFGRGEAVRLLEAGNQVPPLTVRVNRLKA-----------TREE----AAAALAAEGV------------------RTEPTRHSP----------------------QGLIIQDLTSASSLERLEAMKQGLITVQDESSMLAAAVLNPQPGWMVIDVAAAPGGKATHLAELM-DNRGR----VIALDIHPHKVALIEENAERLG------TTIVEAVCLDARRVGEAMPERA-----------DAVLCDLPCSGLGTLARRPDARWRKSPED-VEALVPIQRAILESAAKAL----KPGGVLVYSTCTIQPKENEELVE 406
BLAST of NO05G03550 vs. NCBI_GenBank
Match: OHB79929.1 (hypothetical protein A2Z25_07800 [Planctomycetes bacterium RBG_16_55_9]) HSP 1 Score: 111.3 bits (277), Expect = 1.000e-20 Identity = 135/498 (27.11%), Postives = 204/498 (40.96%), Query Frame = 0 Query: 95 RLKGRQRVVLRTALAQYKYCTRTPLYAIVDHAVECAKQYGGGPSFGAFTNALLRKLPPDPTTDRNDGARQH--QQQREQQYLVFSAEEGDGSDTRPLPLPKGHSEEALAVRLSYPPFLVHLFIEEFGKAKAKLIMEAGNTFPPTMLRSRA----ADAAAPVLPLAGSDTREEEHESASAAAPVAGPAPMSGASK--SLKLPWTTVNNLPPALHTPLPLPYTLGVVRSEKLFRQLTQ-DEGWYVTNGTPAGLLARLAQGAVARVFGSDDAGKGTREGGLRVLDLCAAPGGKGLAVWDVIREGQGHHTLALVMNDVNEEKTGRIRENLSKFGLEDKIHLTIGDGLTLTREELGRQMGSNIEGEGGKEEGGFDVVILDAPCSNAGVLGRRPEARWRLRDEALLRELEETQFSLLKHASEELLSGTSPRGEIWYMTCSILKGEDEGMV----------ERACRELGLEVVVEGGKDLMMKVLPGEGQGGAFDGGFGCALRRR 574 R++G ++R A + YC T +YA+V+ AVE AK G G F NA+LR++ R+ G RQ + ++ L+ A G DT LP + L+ S P +L+ +++EFG+ I A N P +R A A L AG + P+ PA +G K +KL + ++ LH ++ ++S + QL EG ++ A RL + +LDLCAAPG K + E G +V D+N + R++EN+++ G++ + EEL S + + FD V+LD PCSN GVL RR EAR+R+ E + L + Q LL A+ + G+I Y TCSI K E+ +V E C EL +LP + DGG+ LRR+ Sbjct: 72 RIQGGLLAIIRVAAYELIYCPATEIYAVVNEAVELAKAATGKKQAG-FVNAVLRQV------IRHIGNRQSPLSEVATRRTLMQVASSGCEFDTDFLPNREADPAGYLSTVFSLPQWLLADWLDEFGEESTGRICLASNRKPSITIRPNALRITITALVEKLRQAGIELE---------IIPIVTPA-KAGVQKCDDIKL----IESMDSCLHRNDSCHKSMIHIKSPRAISQLPGFAEGEFIVQDVTASRPVRLL----------------NPQPDWTILDLCAAPGVKTTQ----LAEATG-DLATIVATDINPRRLERVKENIARLGIKSV--------NVVPYEELSHSQFSILNSK-------FDCVVLDVPCSNTGVLARRIEARYRISPEG-IHALTKMQSDLLDDAAARV----KAHGKICYSTCSIQKAENGELVRDFLKRNPAFELECEEL---------------ILP-SAEPPDHDGGYTAILRRK 491
BLAST of NO05G03550 vs. NCBI_GenBank
Match: CDZ79925.1 (Ribosomal RNA small subunit methyltransferase B [Candidatus Rubidus massiliensis]) HSP 1 Score: 110.2 bits (274), Expect = 2.200e-20 Identity = 101/386 (26.17%), Postives = 164/386 (42.49%), Query Frame = 0 Query: 187 RPLPLPKGHSEEALAVRLSYPPFLVHLFIEEFGKAKAKLIMEAGNTFPPTMLRSRAADAAAPVLPLAGSDTREEEHESASAAAPVAGPAPMSGASKSLKLPWTTVNNLPPALHTPLPLPYTLGVVRSEKLFRQLTQDEGWYVTNGTPAGLLARLAQGAVARVFGSDDAGKGTREGGLRVLDLCAAPGGKGLAVWDVIREGQGHHTLALVMNDVNEEKTGRIRENLSKFGLEDKIHLTIGDGLTLTREELGRQMGSNIEGEGGKEEGGFDVVILDAPCSNAGVLGRRPEARWRLRDEALLRELEETQFSLLKHASEELLSGTSPRGEIWYMTCSILKGEDEGMVERACRELGLEVVVEGGKDLMMKVLPGEGQGGAFDGGFGCALRR 573 R L + + + E+L+ SYP FL+ ++ +G K I+E N M R R ++A+ M G + + + P L V+ Q++ + +Y+ N T LL+ L+ ++LDLCAAPGGK L ++D + + D + + ++++NL K+ +I L E+L E K FD++++DAPCSN+GVL +RPEARWR+ E L +++ Q L+K+A E+L + G IWY+TCSILK E+E +++ + LE+ + +LP +DGGFG L R Sbjct: 133 RKLTIAESNDLESLSSYYSYPVFLIQELLKNYGLDTTKYILEWANNPSLYMARIRNSNAS------------------------------MDGGYR--------LTHTEPML-----------VIEDNTKITQISMNSDFYIQNVTSVELLSELSNHMPLL--------------PKKILDLCAAPGGKALWLYD-----KFFPQSEIYCYDASLTRLTKLKDNLKKYNASIQI---------LNLEDL----------ENSKH--FFDLIVIDAPCSNSGVLNKRPEARWRITKEHLDQQI-LLQTELIKNAMEKL----TENGAIWYITCSILKKENENLLQDIIKNSPLEITWQ------KTILPNR---EGWDGGFGALLTR 415 The following BLAST results are available for this feature:
BLAST of NO05G03550 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G03550 ID=NO05G03550|Name=NO05G03550|organism=Nannochloropsis oceanica|type=gene|length=1982bpback to top protein sequence of NO05G03550.1 >NO05G03550.1-protein ID=NO05G03550.1-protein|Name=NO05G03550.1|organism=Nannochloropsis oceanica|type=polypeptide|length=575bpback to top Synonyms
Publications
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