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Properties
| Property Name | Value |
|---|
| Description | Unknown protein |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr5 | genome | chr5:821514..823820 + |
Analyses
This gene is derived from or has results from the following analyses
Homology
BLAST of NO05G03170 vs. NCBI_GenBank
Match: EWM28079.1 (hypothetical protein Naga_100120g16 [Nannochloropsis gaditana]) HSP 1 Score: 129.8 bits (325), Expect = 3.400e-26 Identity = 98/166 (59.04%), Postives = 117/166 (70.48%), Query Frame = 0
Query: 34 LPSSHLSAVTLSTATWRVAPLQAVPPPAVDYTAATTVTVQVQQHRMQELEAKVMAVSDTQVRGAATDVEPLLAAVVEEKPLDAIVKTSSGALKGFEGVALLGALPLAFFSARTLERKQKELEAVAAKELEDNAARIDREAEQXXXXXXXXXXXXXXXELLDVKIQR 200
LPS H S +T S AT RVAP+QA P PA+D TV++ +Q L+AKV+A ++ T PLLA VEEKP DA+VKTSSGALKGFEG A+LGALPLAFFSARTL++KQKE EA AA+++ED XXXXXXXXXXXXXXXE+L+ KIQR
Sbjct: 33 LPSKH-STIT-SKATRRVAPVQATPSPAIDQHDFATVSIFSGNDEIQTLDAKVLAAANAGQPSKGTGTMPLLATTVEEKPFDAVVKTSSGALKGFEGFAVLGALPLAFFSARTLDKKQKETEAEAARQMEDXXXXXXXXXXXXXXXXXXXXXXXXXXEMLEAKIQR 196
The following BLAST results are available for this feature:
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G03170 ID=NO05G03170|Name=NO05G03170|organism=Nannochloropsis oceanica|type=gene|length=2307bp
AACAGGGCACGCGTAAAACGCGTCCAAGCCCGCCGCCTCGCTAGCCCGTC
GTCCACCCCACAACTCTCTTCAAGGAACAACTTACCTTCAGGCAGGAGCA
AGGAACAGGCTACAGCAATGAGGAGCGATCACTCAAGAAGACCACTCAGC
AGGGGGACAGGCTTGCCATCGCTTCTGGTGCTGCTCGTGTTGCTCGGCGC
CAGCATGGCTTTTCTCCTCCCGTCTTCCCACCTGTCCGCCGTGACCCTCT
CCACTGCAACATGGCGTGTGGCCCCCCTCCAGGCCGTTCCTCCGCCCGCG
GTCGACTACACCGCTGCGACCACGGTCACCGTCCAGGTGCAGCAGCATCG
AATGCAAGAATTGGAGGCCAAGGTTATGGCTGTCTCGGACACGCAGGTGC
GCGGCGCGGCCACTGATGTGGAGCCTCTACTGGCGGCGGTCGTTGAGGAG
AAGCCGCTTGATGCTATCGTGAAGACGTCTAGCGGTGCCCTCAAAGGATT
CGAAGGCGTGGCCCTGTTGGGTGCTTTGCCCTTGGCCTTCTTCTCGGCGC
GTACGCTGGAGAGGAAGCAAAAGGAATTGGAGGCTGTGGCTGCCAAGGAG
CTGGAGGACAACGCAGCGCGCATTGACCGAGAAGCGGAACAAGCCCGCGC
CAAGGCCGTGGAAGACGCTCAGAAGGCGGCAAAGAAGGAACTCCTCGATG
TTAAAATTCAGCGGGCCCGCGATGAAGAGAATCGTCTTCGCAAGAACCAG
GAAGAGGAGATCGAGCGTGAGAAGGCCAAACAAGATGCCATCGCCGCCCA
AAAGGTTGCCGAGCAAAAAGAACTACAAATCAAGCGTGAAGGGGAACAAG
CTGCGGCGGCCAGCCTGCAGAGAGAACAGCGTGCGGCTGAAGAGCTTGCT
AAGCTTTCCATCGCCCCAGAGCAAAATGTGGAAGCAGCAGCAGCGGCAGC
AGCCAAGAAGGAAGCCGAGATGAAAGCCGCGGCTGAAGCGAAGGCGGCGG
CTGAAGCGAAGGCGGCGGCCGAAGCGAAGGCCAAGGCGGATGCAGCAGCA
GCAGCAGCGGCAGCAAAGAAGGAGGCCGAGTTGAAAGCCGCGGCTGAAGC
AAAAGCGGCGGCCGAAGCGAAGGCCAAGGCGGATGCAGAAGCAGCAGCAG
CGGCAGCAGCCAAGAAGGAAGCCGAGATGATAGCCGCGGCTGAAGCAAAA
GCGGCGGCTGAAGCGAAGGCCAAGGCGGATGCAGAGGCAGCAGCAGCGGC
AGCAGCCAAGAAGGAAGCCGAGATGAAAGCCGCGGCTGAAGCGAAGGCCA
AGGCGGATGCAGAGGCATCAGCAGCGGCAGCAGCCAAGAAGGAAGCCGAG
ATGAAAGCCGCGGCTGAAGCGAAGGCCAAGGCGGATGCAGAGGCAGCAGC
AGCGGCAGCAGCCAAGAAGGAAGCCGAGATGAAAGCCGCGGCTGAAGCGA
AGGCCAAGGCGGATGCAGAGGCAGCAGCAGCGGCAGCAGCCAAGAAGGAA
GCCGAGATGAAAGCCGCGGCTGAAGCGAAGGCCAAGGCGGATGCAGAGGC
AGCAGCAGCGGCAGCAGCCAAGAAGGAAGCCGAGATGAAAGCCGCGGCTG
AAGCTAAGGCCAAATCAGATGCGGAAGACATACGCAAGCAAGAAAAAGCA
CAGGCATTCAAAACAAAGCAAGCAGAGGAGGCTAGGGCGGCTGCTGAGAA
GCGAGCTGATGCTGTCAAGGCCAAGCGTGAGAAGGAGCAGGCGGAAGAGC
GACAGCGTTTAATCAAGGTGAAGGCAGCAAAGGAGGGCGCGGCAGCCAAA
CATGCTGAGATTGCCCAGGCGCAAGCGAAGAAGAAGCAATTAGAAGTGCA
AGCAAAGGCGGGTGCAAAGACAAAGGCCCCTGCTCCTATTACCTCTGATG
TTCCTAAGAATACCACTCCTGCTTCTGTTGCTGCTCCTGAAGCTGTTCCG
GCACCAAACAAGCCCGTCGAGTTAAGCGCCGCAGAGCAGGCGGCTCAACG
TGCACGACGAGAGGAGGAGATTCGGGCCCGGGCACGAGAGACGCAAAAAG
AGTTGTCGAAGCGGATGGTGGCCGATTTGACCGAAAAATTGTCGATTCCC
AAGTTGAAGGATTACTTGAAGCAGAATAAGGTGAAGGGCCCGAAGAGTAG
TGCGAAAAAGGCAGACTTTGTGAGTGCTGCCTTGACTGTAGCGGAGACAA
AAGGATGGGAAGCTTCAGTGATGGAGTTGCAGAGTTTGAGCAGCGTGCAG
GCCAAGGGGTTTGGGGGTGGCGGGGCGTCGAAGGGAGATGCGAAGAAAAA
GAAGTAA back to topprotein sequence of NO05G03170.1 >NO05G03170.1-protein ID=NO05G03170.1-protein|Name=NO05G03170.1|organism=Nannochloropsis oceanica|type=polypeptide|length=730bp
MRSDHSRRPLSRGTGLPSLLVLLVLLGASMAFLLPSSHLSAVTLSTATWR
VAPLQAVPPPAVDYTAATTVTVQVQQHRMQELEAKVMAVSDTQVRGAATD
VEPLLAAVVEEKPLDAIVKTSSGALKGFEGVALLGALPLAFFSARTLERK
QKELEAVAAKELEDNAARIDREAEQARAKAVEDAQKAAKKELLDVKIQRA
RDEENRLRKNQEEEIEREKAKQDAIAAQKVAEQKELQIKREGEQAAAASL
QREQRAAEELAKLSIAPEQNVEAAAAAAAKKEAEMKAAAEAKAAAEAKAA
AEAKAKADAAAAAAAAKKEAELKAAAEAKAAAEAKAKADAEAAAAAAAKK
EAEMIAAAEAKAAAEAKAKADAEAAAAAAAKKEAEMKAAAEAKAKADAEA
SAAAAAKKEAEMKAAAEAKAKADAEAAAAAAAKKEAEMKAAAEAKAKADA
EAAAAAAAKKEAEMKAAAEAKAKADAEAAAAAAAKKEAEMKAAAEAKAKS
DAEDIRKQEKAQAFKTKQAEEARAAAEKRADAVKAKREKEQAEERQRLIK
VKAAKEGAAAKHAEIAQAQAKKKQLEVQAKAGAKTKAPAPITSDVPKNTT
PASVAAPEAVPAPNKPVELSAAEQAAQRARREEEIRARARETQKELSKRM
VADLTEKLSIPKLKDYLKQNKVKGPKSSAKKADFVSAALTVAETKGWEAS
VMELQSLSSVQAKGFGGGGASKGDAKKKK* back to top
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