NO05G02830, NO05G02830 (gene) Nannochloropsis oceanica

Overview
NameNO05G02830
Unique NameNO05G02830
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1788
Alignment locationchr5:740821..742608 +

Link to JBrowse

Properties
Property NameValue
DescriptionC2h2 zinc finger protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:740821..742608 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR036236Znf_C2H2_sf
IPR019446DUF2431
IPR013087Znf_C2H2/integrase_DNA-bd
Homology
BLAST of NO05G02830 vs. NCBI_GenBank
Match: EWM28222.1 (c2h2 zinc finger protein [Nannochloropsis gaditana])

HSP 1 Score: 565.1 bits (1455), Expect = 2.200e-157
Identity = 305/505 (60.40%), Postives = 362/505 (71.68%), Query Frame = 0
Query:    1 MKRKHDEILSTAALKVLVLGDGNLSYSLGLAERLTGAQVLATSYDDSQEVFTKYTESHATVARLEALGPRVRVLHGVDALDVQESLRQAQAQAQGVKKEKKGEFQEQLQGRDANDIAARDSESTKALMIFDHVVFNHPHTGWEDMHRHTALLAHFLESCKAVLAPPSLTEGQEGGQAHVTLAGDQCKRWKLFETAERLGYELRHICDFYRQFGPNPVPAQIKRHQSGKSFRLRGLPSFTYTFTLK--SKKSSHPEVSYSPHFLPSSSISILWKHSYDAVEHEAAMTIKPAAGDGTTTGPLSKDAPITGVIKSVKCHACEKRFRGPKDLRKHMIDAHETGDDSEAEDLACEPCSRSFKDKTALEQHQRAKHSGKFQNLKPDWCTVEAAAITSNEKGDTKPVAVQPSLHFKGVDRTTYDARAIDKKQLQXXXXXXRKFVLCPVCDYYVTAPGSTAEHLADLRPPERPTYVCHGCDRTFREERALKQHANACWPFEEKMRGDTDSEEK 504
            MKRKH E L T  L+VLVLGDGNLSYSLGLAERL GAQ+LATS+D+ QE+  KYTESHATV RLEALG RVRV++GVDAL++ E+LR+ Q +    + ++   F+E      +N     D      L +FDHV+FNHPHTGWED+HRH ALLAHFLES KAVLA  S T+G EGGQ HVTLAGDQCKRWKL +TA RLG++LRHICDFYRQFGP+  P  IKRHQSGKSFR+RGLPSFTY+FTL+  S  S+    +YS  F PS S   LW+H+YD  EHEAAMTI+P    G   G  SK APIT V+KS+KC  CEK FRGPKDLRKHM DAH+     +AE L CE C R F+D+ AL QHQRAKHSG+FQ+LKPDW T   AA+  +E  ++     QPSLHF+GV++  Y+A   D+++           VLC VCDYYV +   TAEHLADLRPPERP Y C  CDRTFRE RALKQHANACWPF+     +  ++EK
Sbjct:    1 MKRKHAETLCTKPLRVLVLGDGNLSYSLGLAERLPGAQLLATSFDNPQELHRKYTESHATVTRLEALGARVRVIYGVDALNILETLRRVQME----EGKRADSFREPPHDSVSNCARTADGH---PLEVFDHVIFNHPHTGWEDIHRHRALLAHFLESAKAVLA-CSTTQGTEGGQVHVTLAGDQCKRWKLLQTAARLGFKLRHICDFYRQFGPDHPPVDIKRHQSGKSFRIRGLPSFTYSFTLEEVSYYSATANAAYS--FPPSPS---LWRHAYDPEEHEAAMTIRP-GNKGVAGG--SKGAPITDVVKSIKCDTCEKCFRGPKDLRKHMGDAHDK-PPVQAEGLPCEACGRDFRDEAALGQHQRAKHSGRFQDLKPDWST---AALNVSETDESN---AQPSLHFQGVEKEAYEASRADREE---------DMVLCTVCDYYVAS--RTAEHLADLRPPERPIYNCRSCDRTFRELRALKQHANACWPFKNGHGIERGNKEK 471          
BLAST of NO05G02830 vs. NCBI_GenBank
Match: XP_005856154.1 (hypothetical protein NGA_2113200, partial [Nannochloropsis gaditana CCMP526] >EKU20206.1 hypothetical protein NGA_2113200, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 191.0 bits (484), Expect = 8.700e-45
Identity = 105/171 (61.40%), Postives = 126/171 (73.68%), Query Frame = 0
Query:    1 MKRKHDEILSTAALKVLVLGDGNLSYSLGLAERLTGAQVLATSYDDSQEVFTKYTESHATVARLEALGPRVRVLHGVDALDVQESLRQAQAQAQGVKKEKKGEFQEQLQGRDANDIAARDSESTKALMIFDHVVFNHPHTGWEDMHRHTALLAHFLESCKAVLAPPSLTEG 172
            MKRKH E L T  L+VLVLGDGNLSYSLGLAERL GAQ+LATS+D+ QE+  KYTESHATV RLEALG RVRV++GVDAL++ E+LR+ Q +    + ++   F+E      +N     D      L +FDHV+FNHPHTGWED+HRH ALLAHFLES KAVLA  S T+G
Sbjct:    2 MKRKHAETLCTKPLRVLVLGDGNLSYSLGLAERLPGAQLLATSFDNPQELHRKYTESHATVTRLEALGARVRVIYGVDALNILETLRRVQME----EGKRADSFREPPHDSVSNCARTADGH---PLEVFDHVIFNHPHTGWEDIHRHRALLAHFLESAKAVLA-CSTTQG 164          
BLAST of NO05G02830 vs. NCBI_GenBank
Match: OWZ05666.1 (hypothetical protein PHMEG_00022207 [Phytophthora megakarya])

HSP 1 Score: 162.2 bits (409), Expect = 4.400e-36
Identity = 147/481 (30.56%), Postives = 199/481 (41.37%), Query Frame = 0
Query:   15 KVLVLGDGNLSYSLGLAERL-TGAQVLATSYDDSQEVFTKYTESHATVARLEALGPRVRVLHGVDALDVQESLRQAQAQAQGVKKEKKGEFQEQLQGRDANDIAARDSESTKALMIFDHVVFNHPHTGWEDMHRHTALLAHFLESCKAVLAPPSLTEGQEGGQAHVTLAGDQCKRWKLFETAERLGYELRHICDFYRQFGPNPVPAQIKRHQSGKSFRLRGLPSFTYTFTLKSKKSSHPEVSYSPHFLPSSSISILWKHSYDAV------EHEAAMTIKPAAGDGTTTGPLSKDAPITGVIKSVKCHACEKRFRGPKDLRKHMIDAHE-TGDDSEAEDLACEPCSRSFKDKTALEQHQRAKHSGKFQNLKPDWCTVEAAAITSNEKGDTKPVAVQPSLHFKGVDRTTYDARAIDKKQLQXXXXXXRKFVLCPVCDYYVTAPGSTAEHLADLRPPERPTYVCHGCDRTFREERALKQHANAC 488
            +VL +GDGN SYSL LA++  T  Q+ ATSYD   E+  KY ES     +L+ LG    VLH VDA +++ESL         V ++K                             FD VVFNHPH G E++ RH +LL+HF  S   VL      E  E     +TLA  Q +RW+  E A++ G  L    D            + KRHQ+GKSF         +  TL  ++               SS   +++   DA+      + E+A T++     G       K    + +     C  CE+ F+  + LR H+   HE  G   +   L CE C R+FK + A  QHQ AKH GK   +KPDW           EK  T P  V  +   + V  T+ +A A                  C +C            H   L+P       C  C R F EERAL+QH N C
Sbjct:   40 RVLTVGDGNFSYSLALAKQTDTTLQLTATSYDSYDELVAKYPESKRICTQLKELG--ASVLHRVDATNIRESL---------VAEQK-----------------------------FDSVVFNHPHCGEENVRRHQSLLSHFYASALDVLEE---NEENEWNGILLTLAEGQPERWQAVERAQKAGLRLHRQVDNVDNDEVFGFAYERKRHQNGKSF---------HQVTLHGERKK------------QSSTLFIFRRQKDAMDPVKVKDTESATTLE----SGEKVSASRKRKAESELPHEFACTQCERSFKSSQGLRTHVHMVHELEGGAPKKVLLPCEFCDRTFKKEDARRQHQLAKH-GKDPLIKPDWF----------EKQQTVPTTVSEA---ESVVSTSAEAEA----------------KTCSICQLSFPTTEDFDAHWQKLQPRAAAKRKCATCAREFDEERALRQHQNFC 422          
BLAST of NO05G02830 vs. NCBI_GenBank
Match: XP_002899825.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY60879.1 conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 158.7 bits (400), Expect = 4.800e-35
Identity = 142/485 (29.28%), Postives = 197/485 (40.62%), Query Frame = 0
Query:   16 VLVLGDGNLSYSLGLAERL------TGAQVLATSYDDSQEVFTKYTESHATVARLEALGPRVRVLHGVDALDVQESLRQAQAQAQGVKKEKKGEFQEQLQGRDANDIAARDSESTKALMIFDHVVFNHPHTGWEDMHRHTALLAHFLESCKAVLAPPSLTEGQEGGQAHVTLAGDQCKRWKLFETAERLGYELRHICDFYRQFGPNPVPAQIKRHQSGKSFRLRGLPSFTYTFTLKSKKSSHPEVSYSPHFLPSSSISILWKHSYDAVE----HEAAMTIKPAAGDGTTTGPLSKDAPITGVIKSVKCHACEKRFRGPKDLRKHMIDAHETGDDSEAED--LACEPCSRSFKDKTALEQHQRAKHSGKFQNLKPDWC-TVEAAAITSNEKGDTKPVAVQPSLHFKGVDRTTYDARAIDKKQLQXXXXXXRKFVLCPVCDYYVTAPGSTAEHLADLRPPERPTYVCHGCDRTFREERALKQHANAC 488
            VL +GDGN SYSL LA++       T  Q+ ATSYD   E+  KY ES     +L+ LG    V+H VDA +++ESL  A A+                                   + FD VVFNHPH G E++ RH +LL+HF  S   +L     +E  EG    +TLA  Q +RW+  E A + G  L    D         +  + KRHQ+GKSF         +  TL  ++               +S   +++    A E     + A +  PA      +    K    + +     C  C+  F+  + LR H+   HE   D++A    L CE C R+FK + A  QHQ AKH GK   ++PDW    +  A  +  +   K VA   SL      +T                        C +C    T       H   L+P       C  C R F EERAL+QH N C
Sbjct:   37 VLTVGDGNFSYSLALAKQHKNQGNDTPVQLTATSYDSYNELVAKYPESKRICGQLKELG--ASVMHRVDATNLRESLVAAGAEQ----------------------------------LTFDAVVFNHPHCGEENVRRHQSLLSHFYTSALEILED---SEEDEGNGILLTLAEGQPERWQAVERALQAGLRLHRRVDDVDNDAVFGLKYERKRHQNGKSF---------HQVTLHGERKK------------QASTLFIFRRQNKATEAATGEDKATSTDPAVTLERKSSLSRKRKAESELPFEFACTQCDMSFKSAQGLRTHVHMVHELEGDAKANKVLLPCEFCDRTFKKEDARRQHQLAKH-GKDPLIRPDWYEKQQTEAANAASRYSDKVVAAAASLTTDSDPKT------------------------CSICLLSFTTSEDFDAHWQKLQPRASAKRNCPTCSREFDEERALRQHQNFC 436          
BLAST of NO05G02830 vs. NCBI_GenBank
Match: XP_008904128.1 (hypothetical protein PPTG_10506 [Phytophthora parasitica INRA-310] >ETK88412.1 hypothetical protein L915_07328 [Phytophthora parasitica] >ETL41813.1 hypothetical protein L916_07274 [Phytophthora parasitica] >ETM48207.1 hypothetical protein L914_07221 [Phytophthora parasitica] >ETN10367.1 hypothetical protein PPTG_10506 [Phytophthora parasitica INRA-310])

HSP 1 Score: 151.8 bits (382), Expect = 5.900e-33
Identity = 141/481 (29.31%), Postives = 197/481 (40.96%), Query Frame = 0
Query:   15 KVLVLGDGNLSYSLGLAERL------TGAQVLATSYDDSQEVFTKYTESHATVARLEALGPRVRVLHGVDALDVQESLRQAQAQAQGVKKEKKGEFQEQLQGRDANDIAARDSESTKALMIFDHVVFNHPHTGWEDMHRHTALLAHFLESCKAVLAPPSLTEGQEGGQAHVTLAGDQCKRWKLFETAERLGYELRHICDFYRQFGPNPVPAQIKRHQSGKSFRLRGLPSFTYTFTLKSKKSSHPEVSYSPHFLPSSSISILWKHS-YDAVEHEAAMTIKPAAGDGTTTGPLSKDAPITGVIKSVKCHACEKRFRGPKDLRKHMIDAHE-TGDDSEAEDLACEPCSRSFKDKTALEQHQRAKHSGKFQNLKPDWCTVEAAAITSNEKGDTKPVAVQPSLHFKGVDRTTYDARAIDKKQLQXXXXXXRKFVLCPVCDYYVTAPGSTAEHLADLRPPERPTYVCHGCDRTFREERALKQHANAC 488
            +VL +GDGN +YSL LA++       T  Q+ A+SYD   E+  KY E     A+L+ LG    VLH VDA +++ESL  A A              EQL+                    FD V+FNHPH G E++ RH +LL+HF  S   V+      E  E     +TLA  Q +RW+  E A + G  L    D         +    KRHQ+GKSF         +  TL  ++              +S++ I  + +  D V   A    +  +  G+       + P+        C  CE+ F+  + LR H+   HE  G  ++   L CE C R+FK   A  QHQ AKH GK   +KPDW   +  A + +       VA  P++     +  T                       C +C    T       H   L+P       C  C R F EERAL+QH N C
Sbjct:   36 RVLTVGDGNFTYSLALAKQHKNQSNDTPLQLTASSYDSYDELVAKYPECKRICAQLKELG--ASVLHRVDATNLRESLVAAGA--------------EQLK--------------------FDAVIFNHPHCGEENVRRHQSLLSHFYASALDVIED---NEEDEESGILLTLAEGQPERWQAVERALKAGLRLHRQVDEVDNDEVFGLVYDRKRHQNGKSF---------HQVTLHGERKKQ-----------ASTLFIFRRATDEDNVPATAPSVSEEKSAPGSRKRKAESELPL-----EFACTQCERSFKSAQGLRTHVHMVHELEGGANKKVLLPCEFCDRTFKKGDARRQHQLAKH-GKDPLIKPDWYDKQQTATSESN------VAPTPAVLSSNAEPKT-----------------------CSICHLSFTTTEEFGAHWQKLQPRAATKRKCAICTREFDEERALRQHQNFC 422          
BLAST of NO05G02830 vs. NCBI_GenBank
Match: ETI48478.1 (hypothetical protein F443_07496 [Phytophthora parasitica P1569] >ETP46203.1 hypothetical protein F442_07513 [Phytophthora parasitica P10297] >KUF82265.1 hypothetical protein AM587_10007567 [Phytophthora nicotianae] >KUF93798.1 hypothetical protein AM588_10004380 [Phytophthora nicotianae])

HSP 1 Score: 151.0 bits (380), Expect = 1.000e-32
Identity = 141/481 (29.31%), Postives = 196/481 (40.75%), Query Frame = 0
Query:   15 KVLVLGDGNLSYSLGLAERL------TGAQVLATSYDDSQEVFTKYTESHATVARLEALGPRVRVLHGVDALDVQESLRQAQAQAQGVKKEKKGEFQEQLQGRDANDIAARDSESTKALMIFDHVVFNHPHTGWEDMHRHTALLAHFLESCKAVLAPPSLTEGQEGGQAHVTLAGDQCKRWKLFETAERLGYELRHICDFYRQFGPNPVPAQIKRHQSGKSFRLRGLPSFTYTFTLKSKKSSHPEVSYSPHFLPSSSISILWKHS-YDAVEHEAAMTIKPAAGDGTTTGPLSKDAPITGVIKSVKCHACEKRFRGPKDLRKHMIDAHE-TGDDSEAEDLACEPCSRSFKDKTALEQHQRAKHSGKFQNLKPDWCTVEAAAITSNEKGDTKPVAVQPSLHFKGVDRTTYDARAIDKKQLQXXXXXXRKFVLCPVCDYYVTAPGSTAEHLADLRPPERPTYVCHGCDRTFREERALKQHANAC 488
            +VL +GDGN +YSL LA++       T  Q+ A+SYD   E+  KY E     A+L+ LG    VLH VDA +++ESL  A A              EQL+                    FD V+FNHPH G E++ RH +LL+HF  S   V+      E  E     +TLA  Q +RW+  E A + G  L    D         +    KRHQ+GKSF         +  TL  ++              +S++ I  + +  D V   A    +     G+       + P+        C  CE+ F+  + LR H+   HE  G  ++   L CE C R+FK   A  QHQ AKH GK   +KPDW   +  A + +       VA  P++     +  T                       C +C    T       H   L+P       C  C R F EERAL+QH N C
Sbjct:   36 RVLTVGDGNFTYSLALAKQHKNQSNDTPLQLTASSYDSYDELVAKYPECKRICAQLKELG--ASVLHRVDATNLRESLVAAGA--------------EQLK--------------------FDAVIFNHPHCGEENVRRHQSLLSHFYASALDVIED---NEEDEESGILLTLAEGQPERWQAVERALKAGLRLHRQVDEVDNDEVFGLVYDRKRHQNGKSF---------HQVTLHGERKKQ-----------ASTLFIFRRATDEDNVPATAPSVSEEKLAPGSRKRKAESELPL-----EFACTQCERSFKSAQGLRTHVHMVHELEGGANKKVLLPCEFCDRTFKKGDARRQHQLAKH-GKDPLIKPDWYDKQQTATSESN------VAPTPAVLSSNAEPKT-----------------------CSICHLSFTTTEEFGAHWQKLQPRAATKRKCAICTREFDEERALRQHQNFC 422          
BLAST of NO05G02830 vs. NCBI_GenBank
Match: ETL94966.1 (hypothetical protein L917_07162 [Phytophthora parasitica])

HSP 1 Score: 151.0 bits (380), Expect = 1.000e-32
Identity = 141/481 (29.31%), Postives = 196/481 (40.75%), Query Frame = 0
Query:   15 KVLVLGDGNLSYSLGLAERL------TGAQVLATSYDDSQEVFTKYTESHATVARLEALGPRVRVLHGVDALDVQESLRQAQAQAQGVKKEKKGEFQEQLQGRDANDIAARDSESTKALMIFDHVVFNHPHTGWEDMHRHTALLAHFLESCKAVLAPPSLTEGQEGGQAHVTLAGDQCKRWKLFETAERLGYELRHICDFYRQFGPNPVPAQIKRHQSGKSFRLRGLPSFTYTFTLKSKKSSHPEVSYSPHFLPSSSISILWKHS-YDAVEHEAAMTIKPAAGDGTTTGPLSKDAPITGVIKSVKCHACEKRFRGPKDLRKHMIDAHE-TGDDSEAEDLACEPCSRSFKDKTALEQHQRAKHSGKFQNLKPDWCTVEAAAITSNEKGDTKPVAVQPSLHFKGVDRTTYDARAIDKKQLQXXXXXXRKFVLCPVCDYYVTAPGSTAEHLADLRPPERPTYVCHGCDRTFREERALKQHANAC 488
            +VL +GDGN +YSL LA++       T  Q+ A+SYD   E+  KY E     A+L+ LG    VLH VDA +++ESL  A A              EQL+                    FD V+FNHPH G E++ RH +LL+HF  S   V+      E  E     +TLA  Q +RW+  E A + G  L    D         +    KRHQ+GKSF         +  TL  ++              +S++ I  + +  D V   A    +     G+       + P+        C  CE+ F+  + LR H+   HE  G  ++   L CE C R+FK   A  QHQ AKH GK   +KPDW   +  A + +       VA  P++     +  T                       C +C    T       H   L+P       C  C R F EERAL+QH N C
Sbjct:   36 RVLTVGDGNFTYSLALAKQHKNQSNDTPLQLTASSYDSYDELVAKYPECKRICAQLKELG--ASVLHRVDATNLRESLVAAGA--------------EQLK--------------------FDAVIFNHPHCGEENVRRHQSLLSHFYASALDVIED---NEEDEESGILLTLAEGQPERWQAVERALKAGLRLHRQVDEVDNDEVFGLVYDRKRHQNGKSF---------HQVTLHGERKKQ-----------ASTLFIFRRATDEDNVPATAPSVSEEKLAPGSRKRKAESELPL-----EFACTQCERSFKSAQGLRTHVHMVHELEGGANKKVLLPCEFCDRTFKKGDARRQHQLAKH-GKDPLIKPDWYDKQQTATSESN------VAPTPAVLSSNAEPKT-----------------------CSICHLSFTTTEEFGAHWQKLQPRAATKRKCAICTREFDEERALRQHQNFC 422          
BLAST of NO05G02830 vs. NCBI_GenBank
Match: ETO77257.1 (hypothetical protein F444_07516 [Phytophthora parasitica P1976])

HSP 1 Score: 151.0 bits (380), Expect = 1.000e-32
Identity = 141/481 (29.31%), Postives = 196/481 (40.75%), Query Frame = 0
Query:   15 KVLVLGDGNLSYSLGLAERL------TGAQVLATSYDDSQEVFTKYTESHATVARLEALGPRVRVLHGVDALDVQESLRQAQAQAQGVKKEKKGEFQEQLQGRDANDIAARDSESTKALMIFDHVVFNHPHTGWEDMHRHTALLAHFLESCKAVLAPPSLTEGQEGGQAHVTLAGDQCKRWKLFETAERLGYELRHICDFYRQFGPNPVPAQIKRHQSGKSFRLRGLPSFTYTFTLKSKKSSHPEVSYSPHFLPSSSISILWKHS-YDAVEHEAAMTIKPAAGDGTTTGPLSKDAPITGVIKSVKCHACEKRFRGPKDLRKHMIDAHE-TGDDSEAEDLACEPCSRSFKDKTALEQHQRAKHSGKFQNLKPDWCTVEAAAITSNEKGDTKPVAVQPSLHFKGVDRTTYDARAIDKKQLQXXXXXXRKFVLCPVCDYYVTAPGSTAEHLADLRPPERPTYVCHGCDRTFREERALKQHANAC 488
            +VL +GDGN +YSL LA++       T  Q+ A+SYD   E+  KY E     A+L+ LG    VLH VDA +++ESL  A A              EQL+                    FD V+FNHPH G E++ RH +LL+HF  S   V+      E  E     +TLA  Q +RW+  E A + G  L    D         +    KRHQ+GKSF         +  TL  ++              +S++ I  + +  D V   A    +     G+       + P+        C  CE+ F+  + LR H+   HE  G  ++   L CE C R+FK   A  QHQ AKH GK   +KPDW   +  A + +       VA  P++     +  T                       C +C    T       H   L+P       C  C R F EERAL+QH N C
Sbjct:   36 RVLTVGDGNFTYSLALAKQHKNQSNDTPLQLTASSYDSYDELVAKYPECKRICAQLKELG--ASVLHRVDATNLRESLVAAGA--------------EQLK--------------------FDAVIFNHPHCGEENVRRHQSLLSHFYASALDVIED---NEEDEESGILLTLAEGQPERWQAVERALKAGLRLHRQVDEVDNDEVFGLVYDRKRHQNGKSF---------HQVTLHGERKKQ-----------ASTLFIFRRATDEDNVPATAPSVSEEKLAPGSRKRKAESELPL-----EFACTQCERSFKSAQGLRTHVHMVHELEGGANKKVLLPCEFCDRTFKKGDARRQHQLAKH-GKDPLIKPDWYDKQQTATSESN------VAPTPAVLSSNAEPKT-----------------------CSICHLSFTTTEEFGAHWQKLQPRAATKRKCAICTREFDEERALRQHQNFC 422          
BLAST of NO05G02830 vs. NCBI_GenBank
Match: ETP18265.1 (hypothetical protein F441_07482 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 151.0 bits (380), Expect = 1.000e-32
Identity = 141/481 (29.31%), Postives = 196/481 (40.75%), Query Frame = 0
Query:   15 KVLVLGDGNLSYSLGLAERL------TGAQVLATSYDDSQEVFTKYTESHATVARLEALGPRVRVLHGVDALDVQESLRQAQAQAQGVKKEKKGEFQEQLQGRDANDIAARDSESTKALMIFDHVVFNHPHTGWEDMHRHTALLAHFLESCKAVLAPPSLTEGQEGGQAHVTLAGDQCKRWKLFETAERLGYELRHICDFYRQFGPNPVPAQIKRHQSGKSFRLRGLPSFTYTFTLKSKKSSHPEVSYSPHFLPSSSISILWKHS-YDAVEHEAAMTIKPAAGDGTTTGPLSKDAPITGVIKSVKCHACEKRFRGPKDLRKHMIDAHE-TGDDSEAEDLACEPCSRSFKDKTALEQHQRAKHSGKFQNLKPDWCTVEAAAITSNEKGDTKPVAVQPSLHFKGVDRTTYDARAIDKKQLQXXXXXXRKFVLCPVCDYYVTAPGSTAEHLADLRPPERPTYVCHGCDRTFREERALKQHANAC 488
            +VL +GDGN +YSL LA++       T  Q+ A+SYD   E+  KY E     A+L+ LG    VLH VDA +++ESL  A A              EQL+                    FD V+FNHPH G E++ RH +LL+HF  S   V+      E  E     +TLA  Q +RW+  E A + G  L    D         +    KRHQ+GKSF         +  TL  ++              +S++ I  + +  D V   A    +  +  G+       + P+        C  CE+ F+  + LR H+   HE  G  ++   L CE C R+FK   A  QHQ AKH GK   +KPDW   +  A   +       VA  P++     +  T                       C +C    T       H   L+P       C  C R F EERAL+QH N C
Sbjct:   36 RVLTVGDGNFTYSLALAKQHKNQSNDTPLQLTASSYDSYDELVAKYPECKRICAQLKELG--ASVLHRVDATNLRESLVAAGA--------------EQLK--------------------FDAVIFNHPHCGEENVRRHQSLLSHFYASALDVIED---NEEDEESGILLTLAEGQPERWQAVERALKAGLRLHRQVDEVDNDEVFGLVYDRKRHQNGKSF---------HQVTLHGERKKQ-----------ASTLFIFRRATDEDNVPATAPSVSEEKSAPGSRKRKAESELPL-----EFACTQCERSFKSAQGLRTHVHMVHELEGGANKKVLLPCEFCDRTFKKGDARRQHQLAKH-GKDPLIKPDWYDKQQTATLESN------VAPTPAVLSSNAEPKT-----------------------CSICHLSFTTTEEFGAHWQKLQPRAATKRKCAICTREFDEERALRQHQNFC 422          
BLAST of NO05G02830 vs. NCBI_GenBank
Match: CBJ25516.1 (C2H2 zinc finger protein [Ectocarpus siliculosus])

HSP 1 Score: 147.5 bits (371), Expect = 1.100e-31
Identity = 156/605 (25.79%), Postives = 219/605 (36.20%), Query Frame = 0
Query:   15 KVLVLGDGNLSYSLGLAERL-------------------TGAQVLATSYDDSQEVFTKYTESHATVARLEALGPRVRVLHGVDALDVQESLRQAQAQAQGVKKEKKGEFQEQLQGRDANDIAARDSESTKALMIFDHVVFNHPHTGWEDMHRHTALLAHFL----ESCKAVLAP-----------------------PSLTEGQ--------EGGQAHVTLAGDQCKRWKLFETAERLGYELRHICDFYRQFGPNPVPAQI-KRHQSGKSFRLRGLPSFTYTFTLKSKKSSHPEVSYSPHFLPSSSISILWKHSYDAVEHEAAMTIKPAAGDGTTTGPL-SKDAPITGVIKSVK---------------------------CHACEKRFRGPKDLRKHMIDAHETGDDS------EAEDLACEP-CSRSFKDKTALEQHQRAKHSGKFQNLKPDWCT-----------------------------VEAAAITSNE----------KGDTKPVAVQPSLHFKGVDRTTYDARAIDKKQLQXXXXXXRKFVLCPVCDYYVTAPGSTAEHLADLRPPER---PTYVCHGCDRTFREERALKQHANAC 488
            ++L+LGDGN S+SL LA+ L                      +++ATS+D   ++ +KY E+   VA L ++G  V VLH VDA  +   + Q     +                                   F+HV+FNHPHTG EDM RH + L HF      S      P                       P + + Q         GG  HVTLA DQ +RW L E A R G+ L H     R+F    +   + KRHQ+G+SFR R   S T +F+  +  S+            S+    LW       +  +    + A  +    G   + DAP   V  +V+                           C  C KR++  + LR H    HE G +       + E+    P C R F    AL+QH  AKHSG   ++KPDW                               + AA    ++          +  T P  V+      GV      AR +    +            C VC Y+ T+P    +HL +LRPP       Y C  C + F   RAL QHA  C
Sbjct:   14 RILILGDGNFSFSLALAKALLLPPTPHLLPSSPQARLQQQTFEIVATSFDGRLDLLSKYAEAPGIVAALRSVG--VTVLHNVDATALDSRVLQVSPSDR--------------------------RXXXXXXXXFEHVIFNHPHTGTEDMRRHRSFLGHFFHAVANSAIGSTGPVGXXXXXXXXXXXXXXXXXXXXVPGMADRQGGKGAILAPGGAVHVTLALDQPERWGLEEQAARHGFSLVH----RRRFPAEKIDGYMTKRHQTGRSFRQRVQASETLSFSWAA--SAQAARGDDGAAFGSTLPPWLWPEVVMCGDEASPARAETATDEPVRAGGSDAVDAPTPAVDDNVRTRGGGRKGGGCTDRTGAAAAEALLPEVCELCGKRYKSAQALRTHTRQFHELGQEGGVAVAPKKEERCPHPNCGRVFTSDRALDQHVSAKHSGDNVDIKPDWFVGSIYHLEPXXXXXXXXDGDMVVERGQDGGIPAANAAGSDQICRGTAEGAEATTTPKVVETPPEMLGV-----PAREVPATTVCTNIEGNSLCQRCDVCGYWFTSPEDLQQHLDNLRPPIEGAVTRYDCGTCVKDFGSRRALLQHAKFC 579          
The following BLAST results are available for this feature:
BLAST of NO05G02830 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28222.12.200e-15760.40c2h2 zinc finger protein [Nannochloropsis gaditana... [more]
XP_005856154.18.700e-4561.40hypothetical protein NGA_2113200, partial [Nannoch... [more]
OWZ05666.14.400e-3630.56hypothetical protein PHMEG_00022207 [Phytophthora ... [more]
XP_002899825.14.800e-3529.28conserved hypothetical protein [Phytophthora infes... [more]
XP_008904128.15.900e-3329.31hypothetical protein PPTG_10506 [Phytophthora para... [more]
ETI48478.11.000e-3229.31hypothetical protein F443_07496 [Phytophthora para... [more]
ETL94966.11.000e-3229.31hypothetical protein L917_07162 [Phytophthora para... [more]
ETO77257.11.000e-3229.31hypothetical protein F444_07516 [Phytophthora para... [more]
ETP18265.11.000e-3229.31hypothetical protein F441_07482 [Phytophthora para... [more]
CBJ25516.11.100e-3125.79C2H2 zinc finger protein [Ectocarpus siliculosus][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL083nonsL083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR121ngnoR121Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR117ngnoR117Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003618NSK003618Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G02830.1NO05G02830.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|629353gene_3088Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100004g175gene2419Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G02830.1NO05G02830.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G02830 ID=NO05G02830|Name=NO05G02830|organism=Nannochloropsis oceanica|type=gene|length=1788bp
ACAGGTGCCATGAAGAGGAAGCACGATGAGATTCTGAGCACCGCCGCGCT
CAAGGTGTTGGTGCTTGGGGATGGTAACCTGTCGTACAGTCTCGGCTTGG
CCGAACGCCTGACGGGTGCGCAGGTGCTGGCGACCTCGTACGACGACTCG
CAGGAAGTATTCACGAAATATACTGAGAGCCACGCCACGGTGGCGCGTTT
GGAAGCGCTGGGTCCGCGTGTACGTGTGCTACATGGTGTGGACGCCTTGG
ATGTTCAGGAGAGCTTGAGACAGGCACAGGCACAGGCCCAGGGGGTCAAA
AAAGAGAAGAAGGGTGAATTTCAGGAGCAGTTGCAAGGAAGAGATGCAAA
TGACATAGCGGCCAGGGACTCGGAGAGCACCAAGGCATTGATGATCTTCG
ATCACGTGGTATTCAACCATCCGCACACCGGCTGGGAGGACATGCATCGA
CACACCGCTTTGTTGGCCCACTTCTTGGAAAGCTGCAAAGCCGTCTTGGC
GCCGCCGTCTCTCACGGAAGGTCAGGAGGGGGGGCAAGCCCACGTGACGC
TGGCTGGAGACCAGTGCAAGCGCTGGAAACTTTTCGAGACGGCGGAACGC
TTGGGCTATGAGTTGCGGCACATCTGCGACTTCTATCGTCAATTTGGTCC
CAACCCAGTGCCCGCGCAAATCAAGCGACATCAAAGCGGGAAGTCTTTTC
GCCTGCGTGGGCTGCCGAGTTTCACTTATACTTTTACTTTGAAGAGTAAG
AAATCGTCTCATCCCGAGGTCTCCTATTCCCCCCACTTCCTCCCCTCTTC
CTCCATCTCCATCCTTTGGAAACATTCTTACGATGCCGTGGAGCACGAAG
CTGCCATGACGATCAAGCCAGCGGCGGGAGACGGGACCACGACAGGCCCT
CTCAGCAAGGACGCGCCCATCACCGGCGTCATCAAGTCTGTCAAGTGCCA
TGCGTGCGAGAAACGCTTTCGAGGTCCTAAGGACTTGCGCAAGCATATGA
TTGATGCCCATGAGACTGGTGATGATTCAGAGgtaagtcagcaaggacag
gcaaggagggttttgcggggcttctctcatactttgagagggccttgttc
cctagccgatatttctttgtttagcgtatttcttttacgtaaatctatat
caattactgatgtccacatccacaaatccaccaaactatgcaaccaaatc
cagGCGGAAGATCTGGCATGCGAGCCCTGTTCTCGCAGCTTTAAGGATAA
GACGGCCCTAGAGCAACATCAACGTGCCAAGCACTCTGGCAAATTTCAAA
ATCTCAAGCCTGACTGGTGCACGGTGGAAGCAGCAGCCATCACCAGTAAC
GAAAAGGGGGACACAAAGCCGGTGGCAGTCCAACCGTCCCTGCATTTTAA
GGGGGTGGACAGGACTACGTACGATGCGAGGGCTATTGATAAAAAACAGC
TGCAGCAACAGCAGCAGGAGCAGCGGAAATTTGTGCTCTGTCCGGTGTGC
GATTATTATGTGACTGCCCCAGGCAGCACTGCCGAGCACTTGGCTGATCT
CCGGCCGCCCGAGCGTCCCACATACGTCTGCCACGGGTGCGACCGCACTT
TCCGGGAGGAGCGGGCTCTGAAGCAGCACGCCAATGCATGCTGGCCGTTT
GAGGAGAAGATGAGAGGAGACACGGACAGTGAGGAAAAGGAAACAGTATA
AGGAAGAGGATAAACGAACTTAAATAAAAGAACCAAGAAAACATAGATCG
CACAGCAAGTGCGTATGGGCCGGGGGAGGTCACAATTG
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protein sequence of NO05G02830.1

>NO05G02830.1-protein ID=NO05G02830.1-protein|Name=NO05G02830.1|organism=Nannochloropsis oceanica|type=polypeptide|length=507bp
MKRKHDEILSTAALKVLVLGDGNLSYSLGLAERLTGAQVLATSYDDSQEV
FTKYTESHATVARLEALGPRVRVLHGVDALDVQESLRQAQAQAQGVKKEK
KGEFQEQLQGRDANDIAARDSESTKALMIFDHVVFNHPHTGWEDMHRHTA
LLAHFLESCKAVLAPPSLTEGQEGGQAHVTLAGDQCKRWKLFETAERLGY
ELRHICDFYRQFGPNPVPAQIKRHQSGKSFRLRGLPSFTYTFTLKSKKSS
HPEVSYSPHFLPSSSISILWKHSYDAVEHEAAMTIKPAAGDGTTTGPLSK
DAPITGVIKSVKCHACEKRFRGPKDLRKHMIDAHETGDDSEAEDLACEPC
SRSFKDKTALEQHQRAKHSGKFQNLKPDWCTVEAAAITSNEKGDTKPVAV
QPSLHFKGVDRTTYDARAIDKKQLQQQQQEQRKFVLCPVCDYYVTAPGST
AEHLADLRPPERPTYVCHGCDRTFREERALKQHANACWPFEEKMRGDTDS
EEKETV*
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Synonyms
Publications