NO05G02740, NO05G02740 (gene) Nannochloropsis oceanica

Overview
NameNO05G02740
Unique NameNO05G02740
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1908
Alignment locationchr5:721062..722969 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:721062..722969 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
Homology
BLAST of NO05G02740 vs. NCBI_GenBank
Match: GAX15163.1 (hypothetical protein FisN_12Lh136 [Fistulifera solaris])

HSP 1 Score: 235.7 bits (600), Expect = 2.300e-58
Identity = 131/322 (40.68%), Postives = 190/322 (59.01%), Query Frame = 0
Query:   54 AAIDARGQRQSLNLQPKAGGMWQPTPGSIDGVVVLGMHRSGTSMVTGLL-QEMGFHLGEPDDILGAREGENDKGFFERLQVVVQNDKLMKEQDVNWSLNIFNFNHLLALEHALTSKVDFGLGRAALTFFNNPVHHPWAVKDPRLCFTLKFWLPFWRTPPAVLFVYRHPMEVAKSLIHRGNEFGLPRALYLWIAYNRLAIQNSQGLCRVVISNAALIQDG-AGVLGMVYEQLRGCGVDV-PRKVTMKDINSFIDHSLHHQTQNHAKECQPTIRK-------SWKSE-AAGDHEKARQNDAYAHALRVYCAMENGSAFSPSFEW 365
            A++ A+ +    N++P AG         ++GV+VLGMHRSGTSM++GL+    G+H G P  ++G+   +N+KGFFERL VV+QND+ M  Q V WS N+ N++  +AL    + K+ F  G+ AL F N+  + PW  KDPR+C TLK WLP     PA+LF YR+P+EVA SL  R   F L   L LWI YN  AIQNS+GLCRV  SN A++ D    V  +V E    CGV   PR++T +D+N F+D SL H  + H  E +  +          + S+   G   + R+ + Y  A++++C  ++G+A+   +EW
Sbjct:  144 ASLKAKEELALHNVEPPAG---------VNGVIVLGMHRSGTSMLSGLMVTGSGYHTGGP--LIGS-AFDNEKGFFERLDVVLQNDEFMNSQKVWWSSNVLNYHDDVALAEKESGKITFKKGKTALAFLNDSNNAPWLQKDPRMCITLKTWLPLLNNVPAILFTYRNPLEVAMSLKKREKNFTLEHGLRLWIIYNMRAIQNSEGLCRVYSSNDAILNDTLEEVKNIVIELTNKCGVPAPPRQITQEDVNKFVDPSLQH-NKGHQHEGEKVLADYDGCKVYDYVSDFPEGSANRLREKELYIKAMKIHCDFKSGAAYEDDYEW 452          
BLAST of NO05G02740 vs. NCBI_GenBank
Match: GAX23571.1 (hypothetical protein FisN_12Hh136 [Fistulifera solaris])

HSP 1 Score: 233.4 bits (594), Expect = 1.100e-57
Identity = 132/322 (40.99%), Postives = 190/322 (59.01%), Query Frame = 0
Query:   54 AAIDARGQRQSLNLQPKAGGMWQPTPGSIDGVVVLGMHRSGTSMVTGLL-QEMGFHLGEPDDILGAREGENDKGFFERLQVVVQNDKLMKEQDVNWSLNIFNFNHLLALEHALTSKVDFGLGRAALTFFNNPVHHPWAVKDPRLCFTLKFWLPFWRTPPAVLFVYRHPMEVAKSLIHRGNEFGLPRALYLWIAYNRLAIQNSQGLCRVVISNAALIQDG-AGVLGMVYEQLRGCGVDV-PRKVTMKDINSFIDHSLHHQTQNHAKECQPTIRK-------SWKSE-AAGDHEKARQNDAYAHALRVYCAMENGSAFSPSFEW 365
            A++ A+ +    N++P AG         + GV+VLGMHRSGTSM++GL+    G++ G P  ++G+   +N+KGFFERL VV+QND+ M  Q V WS N+ N++  +AL +  + K+ F  G+ AL F N+  + PW  KDPR+C TLK WLP     PA+LF YR+P+EVA SL  R   F L   L LWI YN  AIQNS+GLCRV  SN A++ D    V  +V E    CGV   PR++T +D+N F+D SL H  + H  E +  +          + S+   G   + R+ + Y  A++V+C  ++G+AF   +EW
Sbjct:  143 ASLKAKEKLALHNVEPPAG---------VHGVIVLGMHRSGTSMLSGLMVTGSGYNTGGP--LIGS-AFDNEKGFFERLDVVLQNDEFMNSQKVWWSSNVLNYHDDVALANKESGKITFKKGKTALAFLNDSNNAPWLQKDPRMCITLKTWLPLLNNVPAILFTYRNPLEVAMSLKKREKNFTLEHGLRLWIIYNMRAIQNSEGLCRVYSSNDAILNDTLEEVKNIVSELTNKCGVPAPPRQITQEDVNKFVDPSLQH-NKGHQHEGEKVLADYDGCKVYDYVSDFPEGSANRLREKELYIKAMKVHCDFKSGAAFEDDYEW 451          
BLAST of NO05G02740 vs. NCBI_GenBank
Match: XP_002287131.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED94574.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 215.7 bits (548), Expect = 2.400e-52
Identity = 126/300 (42.00%), Postives = 173/300 (57.67%), Query Frame = 0
Query:   84 GVVVLGMHRSGTSMVTGLL-QEMGFHLGEPDDILGAREGENDKGFFERLQVVVQNDKLMKEQDVNWSLNIFNFNHLLALEHALTSKVDFGLGRAALTFFNNPVHH-PWAVKDPRLCFTLKFWLPFWRTPPAVLFVYRHPMEVAKSLIHRGNEFGLPRALYLWIAYNRLAIQNSQGLCRVVISNAALIQDGAGVLGMVYEQLRG-CGVDVP--RKVTMKDINSFIDHSL-HHQTQNHAKECQPTIRKSW-----KSEAAGDHEKARQN-----DAYAHALRVYCAMENGSAFSPSFEWEDL 368
            G +VLGMHRSGTSM++GLL +  G+  G P  ++GA   +N+KGF+ER+ VV+QND+    Q V WS N++N++   AL+  +  ++ F  G  AL F NNP    P+  KDPR+C  L  WL     PPAV+F YRHP+EVA SL  R + F     L LWI YN  AIQNS GLCRV  +N AL++D  G +  + ++L   C V  P   K++ K +  F+D SL H++ Q  AKE Q  I + +       E   D+ +   N     D Y  A+ V+C +E G AF   +EW DL
Sbjct:  341 GFMVLGMHRSGTSMLSGLLVKGFGYETGGP--LIGA-AFDNEKGFYERIDVVLQNDEFFNAQHVGWSYNVYNYDGHKALQDKIQGRITFKEGTKALQFLNNPHKTLPYLQKDPRMCIALPTWLKLLDHPPAVVFTYRHPLEVAMSLKKREDNFTFEHGLRLWIVYNMRAIQNSVGLCRVFSTNDALVKDALGEVQRIADELTNTCNVIAPPITKLSSKVVEEFVDPSLQHNKKQREAKEQQLGILEDFGEGCVAREFESDYPEGSSNRKAEVDMYLMAMSVFCDLERGRAFEEDYEWPDL 637          
BLAST of NO05G02740 vs. NCBI_GenBank
Match: XP_002181133.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC47056.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 204.9 bits (520), Expect = 4.300e-49
Identity = 110/255 (43.14%), Postives = 153/255 (60.00%), Query Frame = 0
Query:   57 DARGQRQSLNLQPKAGGMWQPTPGSIDGVVVLGMHRSGTSMVTGLLQE-MGFHLGEPDDILGAREGENDKGFFERLQVVVQNDKLMKEQDVNWSLNIFNFNHLLALEHALTSKVDFGLGRAALTFFNNPVHHPWAVKDPRLCFTLKFWLPFWRTPPAVLFVYRHPMEVAKSLIHRGNEFGLPRALYLWIAYNRLAIQNSQGLCRVVISNAALIQDGAGVLGMVYEQLRG-CGV-DVPRKVTMKDINSFIDHSLHH 309
            D +G RQ+ +    A    Q  PG   G +VLGMHRSGTSM+ GL+    G+++G P  ++G    +N+KGFFE +  V+QND+ M+ Q + WS N+ N++H  A+      KV F  G  AL FFN+P + P+  KDPR+C TLK WLP  ++ PAVLF YRHP+EVA SL  R   F L   L LWI YN   ++NSQ LCRV  SN A++ D    +  +  +L   CG+   P ++T +D++ F+D  L H
Sbjct:  138 DQKGARQAND--ESAAEPAQLAPGKRSGFLVLGMHRSGTSMLAGLMATGQGYNVGGP--LIGG-AFDNEKGFFELVDAVLQNDEFMQLQRIWWSSNVINYDHEKAIVAKRNGKVSFDHGEKALAFFNSPRNAPYLQKDPRMCITLKTWLPLLKSEPAVLFTYRHPLEVALSLKRREKNFTLEHGLRLWIVYNMRGVENSQQLCRVYSSNEAILADPLNEVNRISSELTSKCGIPPPPEQLTQEDVDKFVDPDLQH 387          
BLAST of NO05G02740 vs. NCBI_GenBank
Match: OEU15465.1 (hypothetical protein FRACYDRAFT_275679 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 199.1 bits (505), Expect = 2.400e-47
Identity = 112/289 (38.75%), Postives = 166/289 (57.44%), Query Frame = 0
Query:   92 RSGTSMVTGLLQE-MGFHLGEPDDILGAREGENDKGFFERLQVVVQNDKLMKEQDVNWSLNIFNFNHLLALEHALTSKVDFGLGRAALTFFNNPVHHPWAVKDPRLCFTLKFWLPFWRTPPAVLFVYRHPMEVAKSLIHRGNEFGLPRALYLWIAYNRLAIQNSQGLCRVVISNAALIQDGAGVLGMVYEQL-RGCGVDV-PRKVTMKDINSFIDHSLHHQTQNHAKECQPTIR--KSWKSEAAGDHEKARQN--------DAYAHALRVYCAMENGSAFSPSFEWEDL 368
            RSGTSM++GLL E  G+ +G P  ++G+   +N+KGF+ER+ VV+QND+ MK Q + W+    +++  LAL+   + KV F  G  AL F NNP + PW  KDPR+C TLK WL    + PA++F YRHP+EVA S+  R +   L     +WI YN  AIQNSQGLC V  SN A+++D    +  + ++L + CGV   P+++T ++I   ID  L H  +  A E +  I+   + K    G   K  +         D Y  A+ VYC  ++G+A+   + W+ L
Sbjct:  184 RSGTSMLSGLLHESAGYKVGGP--LIGSAP-DNEKGFYERVDVVLQNDEFMKGQSIWWAGKYGSYDWELALKDKESGKVPFKEGERALKFLNNPTNSPWMQKDPRMCITLKTWLKLINSEPAIVFTYRHPLEVALSINKRDDTIPLEAGFRMWIIYNMRAIQNSQGLCTVRSSNDAILEDPLHEVQRISDELTKTCGVPAPPQRITQEEIEKLIDPKLQHNKKKRADEEKEVIKAFNNGKCIVYGYDSKHNKESPAYKLEYDMYLKAMEVYCDFQSGAAYKDDYVWKGL 469          
BLAST of NO05G02740 vs. NCBI_GenBank
Match: EJK73784.1 (hypothetical protein THAOC_04571 [Thalassiosira oceanica])

HSP 1 Score: 195.7 bits (496), Expect = 2.600e-46
Identity = 111/300 (37.00%), Postives = 165/300 (55.00%), Query Frame = 0
Query:   84 GVVVLGMHRSGTSMVTGLL-QEMGFHLGEPDDILGAREGENDKGFFERLQVVVQNDKLMKEQDVNWSLNIFNFNHLLALEHALTSKVDFGLGRAALTFFNNPVHH-PWAVKDPRLCFTLKFWLPFWRTPPAVLFVYRHPMEVAKSLIHRGNEFGLPRALYLWIAYNRLAIQNSQGLCRVVISNAALIQDGAGVLGMVYEQLRG-CGVDVP--RKVTMKDINSFIDHSLHHQTQNHAKECQP----------TIRKSWKSE-AAGDHEKARQNDAYAHALRVYCAMENGSAFSPSFEWEDL 368
            G +VLGMHRSGTSM++GLL +  G+  G P  ++GA   +N+KGF+ER+ VV+QND+    Q++ WS N+ N++   AL    T +V F  G  AL F NN +   P+  KDPR+C  L  WL      PA++F YRHP+EVA SL HR   F +   L LWI YN  A+QNS  LCRV  +N A+       L  +  +L   C V  P   +V+   ++SF+D  L H ++   KE +            + + ++SE   G   +  +   +  A+ +YC +E+G A+   ++W D+
Sbjct:  405 GFIVLGMHRSGTSMLSGLLVKGFGYETGGP--LIGA-SFDNEKGFYERIDVVLQNDEFFGAQNMGWSYNVINYDSEKALHDKSTGRVTFKEGTKALKFLNNHLKTLPYLQKDPRMCIALPTWLKLLDDKPAIVFTYRHPLEVAMSLKHREQNFTIEHGLRLWIIYNMRAVQNSAKLCRVYSTNDAVFSSPMDELQRIKNELTDKCHVMPPPVARVSQSVVDSFVDPKLQHNSKERKKEEEKLGVLKDFGDNCVAREFESEYEKGSSNREAETSMFLMAMEIYCDLESGKAYRKDYKWPDI 701          
BLAST of NO05G02740 vs. NCBI_GenBank
Match: EJK73269.1 (hypothetical protein THAOC_05118 [Thalassiosira oceanica])

HSP 1 Score: 167.2 bits (422), Expect = 1.000e-37
Identity = 117/324 (36.11%), Postives = 168/324 (51.85%), Query Frame = 0
Query:   65 LNLQPKAGGMWQPTPGSIDGVVVLGMHRSGTSMVTGLLQEMGFHLGE-PDDILGAREGENDKGFFERLQVVVQNDKLMKEQDVNWSLNIFNFNHLLALEHALTSKVDFGLG--RAALTFF----NNPVHHPWAVKDPRLCFTLKFWLPFWRTPPAVLFVYRHPMEVAKSL------IHRGNEFGLPRALYLWIAYNRLAIQNSQGLCRVVISNAALIQDGAGVLGMVYEQLR-GCGVDVP--RKVTMKDINSFIDHSLHHQ-------TQNHAKECQPTIRKSWKSE-AAGDHEKARQNDAYAHALRVYCAMENGSAFSPSFEW 365
            ++ Q ++  M  PT     GV+VLGMHRSGTSM+TGLL   G+ LG  PD  L     +N KGF +      +     K  ++ W  NI  F+  LALE  L    + GL       +FF    N+P   P+  KDPR+C TL  WL      PA+LF YRHP+EVA+SL       H G  + L   LYLWI YN  A+++S+ LCRV  SN A+ +     L  ++++L   C V  P   +++ + I+SFID  L HQ        ++    C   + +++ S+ A G  E+  +N  Y  A+  YC +E+G A+   +EW
Sbjct:  711 ISRQVESSAMETPT----TGVMVLGMHRSGTSMLTGLLSNFGYALGAGPDSDLFEAASDNVKGFLKISSSCSKTTFFSK--NMAWDYNISLFDPDLALEGDLDKNGERGLSFLNNEPSFFGLFNNHPKGVPYLQKDPRMCITLPAWLRMLNNRPAILFTYRHPLEVAESLKRREEKEHEGEAYPLTYGLYLWIVYNTQALRHSERLCRVHTSNNAIFKSPLEELLRIHDELTVKCHVMPPPVPEISHEVIDSFIDPHLQHQKGFGGAVVKDFGDGC---LARAFSSDYAEGTVERDAENSMYLAAMEFYCDLESGKAYRDDYEW 1025          
BLAST of NO05G02740 vs. NCBI_GenBank
Match: OEU11193.1 (hypothetical protein FRACYDRAFT_263637 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 152.1 bits (383), Expect = 3.300e-33
Identity = 100/306 (32.68%), Postives = 151/306 (49.35%), Query Frame = 0
Query:   83 DGVVVLGMHRSGTSMVTGLLQEMGFHLGEPDDILGAR-EGENDKGFFERLQVVVQNDKLMKEQDVNW-SLNIFNFNHLLALEHALTSKVDFG----LGRAALTFFNNPVHHPWAVKDPRLCFTLKFWLPF-------WRTPPAVLFVYRHPMEVAKSL-IHRGNEFGLPRALYLWIAYNRLAIQNSQGLCRVVISNAALIQDGAGVLGMVYEQLRGCGVDVPRKVTMKDINSFIDHSLHHQTQNH-------AKECQPTIRKSWKSEAAGDHEKARQNDA---YAHALRVYCAMENGSAFSPSFEW 365
            D ++VLGMHRSGTS++TG+L ++ FH   P D + A    +N KGFFE + +  QND  ++EQD++W  L ++      ++ +        G     G+ AL  +NN  + PWA+KDPRLC  L  WL                 F YR+PM+ A+SL   + N   + +   LWI YNR AI+ S GLCRV+ SN AL+ D    +  +  +L  CG+    K    +++ FI+    H +  H       A + +   +         D  K  Q+     Y  A+ V+C M++G AF   + W
Sbjct:  299 DCLIVLGMHRSGTSLLTGVLSKV-FHWHVPGDHVFANITSQNPKGFFENIDIARQNDAWLEEQDMSWDELGMYTSKDNSSIVYGGLDFSKIGPLNTNGKGALIAYNNIENRPWALKDPRLCIILSKWLSLXXXXXXXXXXXXXXXFTYRNPMDSARSLGARKRNPVPMLKGFKLWIWYNREAIRLSNGLCRVITSNDALLADANNEIARIENELSICGLKAVIKPHYDEVDKFINPDFQHGSDKHRNKNRNVAVDDKTLCKIPPYQSPTIDASKLLQSTEKIFYYKAMHVFCDMKSGKAFLNDYIW 603          
BLAST of NO05G02740 vs. NCBI_GenBank
Match: CDH46430.1 (hypothetical protein BN874_460051 [Candidatus Contendobacter odensis Run_B_J11])

HSP 1 Score: 131.0 bits (328), Expect = 7.900e-27
Identity = 80/227 (35.24%), Postives = 118/227 (51.98%), Query Frame = 0
Query:   85 VVVLGMHRSGTSMVTGLLQEMGFHLGEPDDILGAREGENDKGFFERLQVVVQNDKLMKEQDVNWSLNIFNFNHLLALEHALTSKVDFGLGRAALTFFNNPVHHPWAVKDPRLCFTLKFWLPFWRTPPAVLFVYRHPMEVAKSLIHRGNEFGLPRALYLWIAYNRLAIQNSQGLCRVVISNAALIQDGAGVLGMVYEQLRGCGVDVPRKVTMKDINSFIDHSL-HHQT 311
            +++LGMHRSGTS VT L+  MG ++G  D  L A + +N KGF+ER+ V+  +  ++++  ++W L        L L    T  VD     A         H PW +KDPRLC  L  WL     P  V  V RHP+  A+SL  R + F L   + LW  YN  A+  S GL R  I    L++     + ++Y++L  CGV   R  + ++I +F++  L HH+T
Sbjct:    3 IIILGMHRSGTSAVTRLINMMGAYIGPEDQFLPA-QPDNPKGFWERIDVINLHKSMLEKLGIDWHL-----ISTLDLNSIDTELVDTFTQGAKKIMLGIDSHRPWVLKDPRLCLLLPLWLSLLEVPVCV-HVARHPLSTAQSLAKR-DGFPLHFGITLWEQYNARALVVSSGLPRFSICYEQLMEQPVETVELLYKRLCDCGVQALRLPSEREIRAFLESELQHHRT 221          
BLAST of NO05G02740 vs. NCBI_GenBank
Match: WP_091335536.1 (hypothetical protein [Allochromatium warmingii] >SDY47314.1 Sulfotransferase family protein [Allochromatium warmingii])

HSP 1 Score: 129.0 bits (323), Expect = 3.000e-26
Identity = 80/226 (35.40%), Postives = 121/226 (53.54%), Query Frame = 0
Query:   85 VVVLGMHRSGTSMVTGLLQEMGFHLGEPDDILGAREGENDKGFFERLQVVVQNDKLMKEQDVN-WSLNIFNFNHLLALEHALTSKVDFGLGRAALTFFNNPVHHPWAVKDPRLCFTLKFWLPFWRTPPAVLFVYRHPMEVAKSLIHRGNEFGLPRALYLWIAYNRLAIQNSQGLCRVVISNAALIQDGAGVLGMVYEQLRGCGVDVPRKVTMKDINSFIDHSLHHQ 310
            ++VLGMHRSGTS VT ++  MG +LG  +    A    N KG +ER  V+  ND L +    + W L+ F+  ++ A      ++ +F  G+A     N   + PW +KDPRLC     W P     P ++ V+RHP++VA+SL  R   F L   + LW  + R AI +S+GL R+ + +  ++ D  G  G ++E L    V   R+ T ++I +FID  LH Q
Sbjct:    3 LIVLGMHRSGTSAVTRMINMMGAYLG-AEGCFQAASPSNPKGHWERRDVMQFNDALFRSVGASWWQLSGFDAANIPA-----EARAEFE-GKARNLILNLDANRPWVLKDPRLCVLFPCWRPLLEV-PVIVHVFRHPIQVAQSLKAR-EGFPLAFGIALWERHLRDAIHSSRGLPRLAVRHEDMLSDPVGATGQLFETLSTLEVQGLRRPTAREITAFIDPRLHRQ 219          
The following BLAST results are available for this feature:
BLAST of NO05G02740 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
GAX15163.12.300e-5840.68hypothetical protein FisN_12Lh136 [Fistulifera sol... [more]
GAX23571.11.100e-5740.99hypothetical protein FisN_12Hh136 [Fistulifera sol... [more]
XP_002287131.12.400e-5242.00predicted protein [Thalassiosira pseudonana CCMP13... [more]
XP_002181133.14.300e-4943.14predicted protein, partial [Phaeodactylum tricornu... [more]
OEU15465.12.400e-4738.75hypothetical protein FRACYDRAFT_275679 [Fragilario... [more]
EJK73784.12.600e-4637.00hypothetical protein THAOC_04571 [Thalassiosira oc... [more]
EJK73269.11.000e-3736.11hypothetical protein THAOC_05118 [Thalassiosira oc... [more]
OEU11193.13.300e-3332.68hypothetical protein FRACYDRAFT_263637 [Fragilario... [more]
CDH46430.17.900e-2735.24hypothetical protein BN874_460051 [Candidatus Cont... [more]
WP_091335536.13.000e-2635.40hypothetical protein [Allochromatium warmingii] >S... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL083nonsL083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR121ngnoR121Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR117ngnoR117Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G02740.2NO05G02740.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO05G02740.1NO05G02740.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G02740.2NO05G02740.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO05G02740.1NO05G02740.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G02740 ID=NO05G02740|Name=NO05G02740|organism=Nannochloropsis oceanica|type=gene|length=1908bp
CCGGAGAAGTCGAGGTCTAGTTATTCGCTGTGGAATGGGGGGATGTCACC
GCTCTGGGCATAGCTCCATGGTGGAGGAAGATATTATACCTCTCCGAGGC
TGAGGATGGATGGAATCAGCTCCACGGTGGACTAAGTAAGGAGGGCAGCT
CATGTTTGAGGGAAGAAGGGCACTTGAAGAAGTGTAAGCGATGGTTGTTC
AGAAGTTCTTCATCCCGTCGCTCGCCGAGCACACAACCCATTACGTGGGT
CAATATGATGCCTTGATATGTCTCTGTTGACCACTCGCTAACACACACAC
TTAAGCAATCGCAGGCTTGTTACACGAGTCATGGCATACGGCTCGTGGCC
GATAAAAAATAACGGGCCTCACCCATACAACAAGGTAACAAGTGGCAAAC
CAAGgtaagttttcagcaccctttgacccaccattctctgatctttgcgg
aggcccgctcagtctccattatacttcctactattgaccaaaccagACAG
CGACGGGTTTGGCCTGCGGTGGTGTTGCTTGCTTTCGTGCTCTATGGCGC
TTTCGTCTACACCCGCGACAGCGCCGGTCACGCTGCTATAGATGCGCGGG
GCCAGCGACAATCTCTAAATCTCCAGCCCAAGGCCGGCGGTATGTGGCAG
CCCACACCAGGCAGCATCGATGGCGTCGTGGTCCTTGGCATGCACCGCTC
CGGAACTTCCATGGTGACGGGTTTGCTGCAGGAAATGGGTTTCCATTTGG
GAGAGCCTGACGATATTCTGGGAGCGAGGGAGGGGGAAAACGACAAGGGC
TTCTTCGAGCGGCTCCAAGTTGTCGTGCAGAACGATAAGCTGATGAAGGA
ACAAGATGTTAACTGGTCTCTCAACATATTTAACTTCAACCACCTCCTGG
CTTTGgtaggtgaaagcattccatgtgtcaaaacgaaatctgcgattcgt
attatctctttccccttcagcagctcaaattaagacacgtttcatcccct
tcctgttaaggtcacaacaaaatttatacccatttgtcacggtaccgcgt
ttccgcccaccgctcttttttcatgcaatacatacatgtcccttgcaacc
tactaaaaccccttttccttttcatgcagGAACACGCTCTAACGAGCAAG
GTAGACTTCGGACTTGGACGCGCTGCTTTGACCTTTTTCAACAACCCTGT
ACATCATCCATGGGCCGTCAAAGACCCGAGGCTTTGCTTCACTTTGAAAT
TTTGGCTGCCCTTCTGGAGGACGCCCCCTGCCGTGCTCTTCGTATACCGG
CACCCAATGGAAGTGGCCAAATCCTTGATTCATCGTGGGAACGAGTTTGG
GCTGCCCCGCGCACTATATCTCTGGATAGCGTACAACCGCCTGGCGATTC
AAAACTCTCAAGGACTTTGCCGCGTTGTCATTTCGAATGCGGCGCTCATC
CAGGACGGGGCGGGCGTGCTAGGCATGGTCTACGAGCAGCTCCGGGGCTG
TGGTGTCGATGTTCCCCGGAAGGTCACCATGAAAGACATCAACAGCTTCA
TTGACCATAGCCTGCACCATCAGACGCAGAATCACGCAAAGGAGTGCCAG
CCCACGATCCGAAAGTCATGGAAGAGCGAGGCTGCCGGTGATCATGAAAA
GGCGCGACAGAATGATGCGTATGCGCATGCTCTGAGGGTGTACTGCGCCA
TGGAGAATGGCTCGGCCTTTTCTCCTTCATTTGAGTGGGAGGACCTTGGA
GACACAGCACCATCGTAATTTTCATATAGGCATGGAAGACGAACTTCAGA
CAAAATCAAAAGTAGATGAGAAAGAATCGATGCATATAGTGTATTAAGTA
AAAAATAGAAAATAGAAAAGGGAAAAATTTGATTCAGATGAGAAAGAATC
GATGCATA
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protein sequence of NO05G02740.2

>NO05G02740.2-protein ID=NO05G02740.2-protein|Name=NO05G02740.2|organism=Nannochloropsis oceanica|type=polypeptide|length=301bp
MWQPTPGSIDGVVVLGMHRSGTSMVTGLLQEMGFHLGEPDDILGAREGEN
DKGFFERLQVVVQNDKLMKEQDVNWSLNIFNFNHLLALEHALTSKVDFGL
GRAALTFFNNPVHHPWAVKDPRLCFTLKFWLPFWRTPPAVLFVYRHPMEV
AKSLIHRGNEFGLPRALYLWIAYNRLAIQNSQGLCRVVISNAALIQDGAG
VLGMVYEQLRGCGVDVPRKVTMKDINSFIDHSLHHQTQNHAKECQPTIRK
SWKSEAAGDHEKARQNDAYAHALRVYCAMENGSAFSPSFEWEDLGDTAPS
*
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protein sequence of NO05G02740.1

>NO05G02740.1-protein ID=NO05G02740.1-protein|Name=NO05G02740.1|organism=Nannochloropsis oceanica|type=polypeptide|length=374bp
MAYGSWPIKNNGPHPYNKVTSGKPRQRRVWPAVVLLAFVLYGAFVYTRDS
AGHAAIDARGQRQSLNLQPKAGGMWQPTPGSIDGVVVLGMHRSGTSMVTG
LLQEMGFHLGEPDDILGAREGENDKGFFERLQVVVQNDKLMKEQDVNWSL
NIFNFNHLLALEHALTSKVDFGLGRAALTFFNNPVHHPWAVKDPRLCFTL
KFWLPFWRTPPAVLFVYRHPMEVAKSLIHRGNEFGLPRALYLWIAYNRLA
IQNSQGLCRVVISNAALIQDGAGVLGMVYEQLRGCGVDVPRKVTMKDINS
FIDHSLHHQTQNHAKECQPTIRKSWKSEAAGDHEKARQNDAYAHALRVYC
AMENGSAFSPSFEWEDLGDTAPS*
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Synonyms
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