NO05G02530, NO05G02530 (gene) Nannochloropsis oceanica

Overview
NameNO05G02530
Unique NameNO05G02530
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length735
Alignment locationchr5:668262..668996 -

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Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:668262..668996 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR035766SPRYD7
Homology
BLAST of NO05G02530 vs. NCBI_GenBank
Match: EWM28118.1 (hypothetical protein Naga_100036g27 [Nannochloropsis gaditana])

HSP 1 Score: 257.7 bits (657), Expect = 3.700e-65
Identity = 141/244 (57.79%), Postives = 171/244 (70.08%), Query Frame = 0
Query:    1 MATFFCSCLASLMGGXXXXXXXKDDSMRPGPAVEMTRGKKGSSGSADNRAFPTTPRVKHDLDMKGSQVQVKTAANGCYVVAGKGLAIASLALEQDCSFWQVKVLKAGRFSMGVSRAVDAKVLEENDEKGSLEWAVIVAGGSGNEITKREEAAEKDAAADNMVTAQDGHVFSCVFDQSSFPMLCFYQNGKELEGKAVNRVRGLVFPALQVFGEGAELSFLFHENDWTHPPPSSRHMMILETRNMI 245
            M   FCSCLA L          +        +V MTRG  G  G+ D     TTPRVKHD++M+GSQV+VK  ANG ++++G GL IASL LEQDCSFWQVKVL+ GRFSMGVSRA +A  LE    K  LEWA+ V   S    ++REE  E       MV ++DG +FSCVFDQSS PML F+QNGKELE +A+NRVRGLVFPAL++FG+G ELSFLFHE++W++PPPSSR+MMILETR MI
Sbjct:    1 MVNEFCSCLAHLWESSEEHERSQKRGGGAARSVNMTRGDTG-KGTED----ATTPRVKHDINMRGSQVRVKELANGRFLISGAGLTIASLPLEQDCSFWQVKVLQPGRFSMGVSRAAEASALE--GMKEPLEWALRV--NSAEAQSEREEDGE-----SAMVVSRDGDIFSCVFDQSSCPMLRFFQNGKELEKQAINRVRGLVFPALELFGDGVELSFLFHESEWSYPPPSSRYMMILETRRMI 230          
BLAST of NO05G02530 vs. NCBI_GenBank
Match: XP_005854951.1 (hypothetical protein NGA_2032100, partial [Nannochloropsis gaditana CCMP526] >EKU21409.1 hypothetical protein NGA_2032100, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 134.8 bits (338), Expect = 3.600e-28
Identity = 66/106 (62.26%), Postives = 83/106 (78.30%), Query Frame = 0
Query:  131 LEWAVIVAGGSGNEITKREEAAEKDAAADNMVTAQDGHVFSCVFDQSSFPMLCFYQNGKELEGKAVNRVRGLVFPALQVFGEGAELSFLFHENDWTHPPPSSRHMM 237
            LEWA+ V   S    ++REE  E       MV ++DG +FSCVFDQSS PML F+QNGKELE +A+NRVRGLVFPAL++FG+G ELSFLFHE++W++PPPSSR+MM
Sbjct:    1 LEWALRV--NSAEAQSEREEDGE-----SAMVVSRDGDIFSCVFDQSSCPMLRFFQNGKELEKQAINRVRGLVFPALELFGDGVELSFLFHESEWSYPPPSSRYMM 99          
BLAST of NO05G02530 vs. NCBI_GenBank
Match: XP_009035097.1 (hypothetical protein AURANDRAFT_62846 [Aureococcus anophagefferens] >EGB10284.1 hypothetical protein AURANDRAFT_62846 [Aureococcus anophagefferens])

HSP 1 Score: 97.4 bits (241), Expect = 6.400e-17
Identity = 65/184 (35.33%), Postives = 92/184 (50.00%), Query Frame = 0
Query:   61 LDMKGSQVQVKTAANGCYVVAGKGLAIASLALEQDCSFWQVKVLKAGRFSMGVSRAVDAKVLEENDEKGSLEWAVIVAGGSGNEITKREEAAEKDAAADNMVTAQDGHVFSCVFDQSSFPMLCFYQNGKELEGKAVNRVRGLVFPALQVFGEGAELSFLFHENDWTHPPPSSRHMMILETRNMI 245
            LD  G  V V+++A G   + G G+A  S A+EQD ++W++ V  AG F +GV R +    L      G   WA+                   D+AA   V   +G V    F Q+  P L F+ NG+ LE   VNR+RG VFPA  V G GA+L  +F E ++ H PP + H  +  T+N+I
Sbjct:   29 LDRNGGDVSVESSATG-DALGGSGVAYTSTAIEQDAAYWELHVEAAGPFRVGVCRELGEAQLGGELGDGQTSWAL-------------------DSAAAGAV---EGDVIGVAFGQAELPNLSFFLNGELLEHGMVNRIRGEVFPAASVTG-GAKLRCVFDEANFEHAPPRT-HSALRVTQNII 187          
BLAST of NO05G02530 vs. NCBI_GenBank
Match: OLQ11828.1 (hypothetical protein AK812_SmicGene4258 [Symbiodinium microadriaticum])

HSP 1 Score: 92.8 bits (229), Expect = 1.600e-15
Identity = 64/205 (31.22%), Postives = 97/205 (47.32%), Query Frame = 0
Query:   46 ADNRAFPTTPRVKHDLDMKGSQVQVKTAANGCYVVAGKGLAIASLALEQDCSFWQVKVLKAGRFS----MGVSRAVDAKVLEENDEKGSLEWAV--IVAGGSGNEITKREEAAEKDAAADNMVTAQDGHVFSCVFDQSSFPMLCFYQNGKELEGKAVNRVRGLVFPALQVFGEGAELSFLFHENDWTHPPPSSRHMMILETRNMI 245
            AD       P  K  +  +G QV+V   A G  ++ GKG+A+A   +EQD ++W+++VL+ G  S    +GV+  ++ + L+     G+  WA+   +AGG+                       Q   V    F Q   P L FY+NG E+    V R+RG  FPA  V  +GAEL  +F  + +   PP  RH+ I+  R MI
Sbjct:  184 ADEEEATLAPPPKVQVGKRGGQVKVSQDAAG-ILLTGKGVALAGTVIEQDAAYWEIRVLEPGTTSRSAFVGVALDLNGQRLDSKLGDGTSSWALGGDLAGGA----------------------LQKNDVIGVAFGQGDIPNLRFYRNGTEIREAEVLRIRGEAFPAFSV-SDGAELLVVFESSGFAQEPP-GRHVAIVAPRKMI 363          
BLAST of NO05G02530 vs. NCBI_GenBank
Match: XP_002286022.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED95663.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 72.8 bits (177), Expect = 1.700e-9
Identity = 59/214 (27.57%), Postives = 97/214 (45.33%), Query Frame = 0
Query:   42 SSGSADNRAFPTTPRVKHDLDMKGSQVQVKTAANGCYVVAGKGLAIASLALEQDCSFWQVKVLKAGRFS-----MGVSRAVDA---KVLEENDEKGSLEWAVIVAGGSGNEITKREEAAEKDAAADNMVTAQDGHVFSCVFDQSSFPMLCFYQNGKELEGKAVNRVRGLVFPALQV--FGEG-AELSFLFHENDWTHPPPSSRHMMILETRNMI 245
            S  S       + P+V H +D+  S   +KT+ +    V G GLA+  +A+EQD ++W+ +V      S      GVS   +A   K+L E                  + I + +   +   A  N+   +DG V   V  QS  PM+  Y NG+  +G  V R RG V+PA+ +    EG    + L+ E+ + H PPS+    ++  R+++
Sbjct:   22 SDNSHSEDLVESIPQV-HSIDVSMSAPTIKTSIDSSSEVGGHGLALVDVAVEQDRAYWEFRVKMNACVSSWPPMFGVSNKRNAAFYKILAE------------------STIPEEKHGTKFMCAVSNL---KDGDVVGVVVTQSEIPMIQIYLNGEIQDGLQVTRFRGTVYPAIYLPNCSEGFMSATMLYREDQFVHGPPSAGITPLIAERSLM 213          
BLAST of NO05G02530 vs. NCBI_GenBank
Match: XP_014160083.1 (hypothetical protein SARC_01659 [Sphaeroforma arctica JP610] >KNC86181.1 hypothetical protein SARC_01659 [Sphaeroforma arctica JP610])

HSP 1 Score: 72.0 bits (175), Expect = 2.900e-9
Identity = 63/186 (33.87%), Postives = 92/186 (49.46%), Query Frame = 0
Query:   55 PRVKHDLDMKGSQVQVKTAANGCYVVAGKGLAIASLALEQDCSFWQVKVLKAGRFSMGVS-RAVDAKVLEENDEKGSLEWAVIVAGGSGNEITKREEAAEKDAAADNMVTAQDGHVFSCVFDQSSFPMLCFYQNGKELEGKAVNRVRGLVFPALQVFGEGAELSFLFHENDWTHPPPSSRHMMILE 240
            P+V  D + KG  V V    +G   V G+G A+A+  L QD S+W+VKV   G + +GVS R  D K +     +G+  W       +  EI    EA  + A   + +  ++G V  C +D      L FY NGK+LE  +V  VRG V+P++ V   GA L   F   ++ HPPP     ++ E
Sbjct:   22 PKVLIDENYKGPNVVV----DGGLCVRGRGAALANGPLVQDQSYWEVKVKSGGSWGLGVSLRTEDLKSVPLG--QGNQSWVF----RNDGEIYHCGEAYTQYA---DKIAVKEGDVIGCSYDHVD---LHFYINGKQLE-CSVMTVRGKVYPSVYV-DNGAVLDCEF--TNFAHPPPRGYSRIMFE 187          
BLAST of NO05G02530 vs. NCBI_GenBank
Match: GAX12448.1 (hypothetical protein FisN_2Hh282 [Fistulifera solaris])

HSP 1 Score: 70.1 bits (170), Expect = 1.100e-8
Identity = 43/166 (25.90%), Postives = 80/166 (48.19%), Query Frame = 0
Query:   80 VAGKGLAIASLALEQDCSFWQVKVLKAGRFSMGVSRAVDAKVLEENDEKGSLEWAVIVAGGSGNEITKREEAAEKDAAADNMVTAQDGHVFSCVFDQSSFPMLCFYQNGKELEGKAVNRVRGLVFPALQV-FGEGAELSFLFHENDWTHPPPSSRHMMILETRNMI 245
            ++G GL +  +A+EQD ++W+  +    +   G+S+ V   V  + D++                + +++ A  K  +    +  +DG V      QS  PM+ F  NG+ L   AVNR RG V+PA+ +   +G  + F+F E+++    P +R   ++  R +I
Sbjct:   50 MSGYGLGLVGVAVEQDAAYWEAHI----QHDPGMSQEVSFGVATKKDQQ------------FYRSMEEQDSADAKGTSLMRSIKVKDGDVVGIAVQQSDLPMVQFLLNGEPLHDLAVNRFRGAVYPAIYLPENDGLTVRFVFRESEFEKLSPHARFGPLIVARGII 199          
BLAST of NO05G02530 vs. NCBI_GenBank
Match: OMJ92914.1 (hypothetical protein SteCoe_4256 [Stentor coeruleus])

HSP 1 Score: 67.4 bits (163), Expect = 7.100e-8
Identity = 49/169 (28.99%), Postives = 84/169 (49.70%), Query Frame = 0
Query:   57 VKHDLDMKGSQVQVKTAANG----CYVVAGKGLAIASLALEQDCSFWQVKVLKAGRFSMGVSRAVDAKVLEENDEKGSLEWAVIVAGGSGNEITKREEAAEKDAAADNMVTAQDGHVFSCVFDQSSFP-MLCFYQNGKELEGKAVNRVRGLVFPALQVFGEGAELSFLF 221
            VK D  +  S+V++     G     + V G G A+A+  L QD ++++VKV+K G  ++GV++  +   L E   + S  W ++ +   G  + K                 + G + SC+FDQS FP ++ F ++   LEG  V  ++G V PA+ +   GAE+  +F
Sbjct:   41 VKMDPTLSSSRVRIIEQKIGQHRMTFNVTGYGKALANSQLIQDKAYFEVKVIKPGNIAIGVAKN-NKDHLHEGVGQDSDSWGILFSAAEGPSVYK----------------VKAGTIISCLFDQSDFPAVVSFMKDEVILEGARVTGMKGPVVPAVSI-ESGAEIEVIF 191          
BLAST of NO05G02530 vs. NCBI_GenBank
Match: CEL92292.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 67.0 bits (162), Expect = 9.200e-8
Identity = 49/154 (31.82%), Postives = 73/154 (47.40%), Query Frame = 0
Query:   79 VVAGKGLAIASLALEQDCSFWQVKVLKAGRFSMGVSRAVDAKVLE----ENDEKGSLEWAVIVAGGSGNEITKREEAAEKDAAADNMVTAQDGHVFSCVFDQSSFP-MLCFYQNGKELEGKAVNRVRGLVFPALQVFGEGAELSFLFHENDWTH 228
            V  G G+ ++++ + QD  +W+V+VLK GR  +GVSR +    LE    + D +G        AGG G+ +     A          +      V SC FDQS  P  L F  NGK L+   ++ V+G V PA+ +  EGA +   F  +   H
Sbjct:   85 VARGSGVVLSNVPIIQDKVYWEVRVLKVGRILVGVSRELVGDYLENLAADGDGRG--------AGGFGDGVMSWARA----FGVQGGIPVAPDDVISCTFDQSDIPTRLAFRLNGKALDSATISGVKGEVRPAVGI-AEGACVEVNFDPSHCRH 225          
BLAST of NO05G02530 vs. NCBI_GenBank
Match: XP_023014091.1 (SPRY domain-containing protein 7 [Leptinotarsa decemlineata])

HSP 1 Score: 65.9 bits (159), Expect = 2.100e-7
Identity = 64/209 (30.62%), Postives = 103/209 (49.28%), Query Frame = 0
Query:   47 DNRAF-PTTPRVKHDLDMKGSQVQVKTAANGCYV--------VAGKGLAIASLALEQDCSFWQVKVLKAGRFSMGV-SRAVDAKV-LEENDEKGSLEWAVIVAGGSGNEITKREEAAEKDAAADN-----MVTAQDGHVFSCVFDQSSFPMLCFYQNGKELEGKAVNRVRGLVFPALQVFGEGAELSFLFHENDWTHPPPSSRHMMILE 240
            DN +F PT P V      K + +Q+ TA  G  V        V G G A+ +  L Q  S+++VK+ ++G +S+G+ +R  D  + L   DE     W +    G  + I   ++   K    +N     M T Q+G +    FD      L F+ NGKE+E ++++ V+G V+PAL V  +GA L  +   +++ H PPS    ++LE
Sbjct:   40 DNFSFSPTVPLVP-----KENPIQLDTAFMGYEVVIVKGGQRVCGTGAALGNAPLVQSKSYFEVKIQQSGSWSIGIATRQTDLSLSLGGMDE---FSWVL----GHDHIIRHNKQELHKINICNNSDNNGMQTIQEGDIIGVAFDHI---QLKFFLNGKEIE-QSISNVKGTVYPALYV-DDGAILDIIL--DNFKHSPPSGFDKIMLE 229          
The following BLAST results are available for this feature:
BLAST of NO05G02530 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 13
Match NameE-valueIdentityDescription
EWM28118.13.700e-6557.79hypothetical protein Naga_100036g27 [Nannochlorops... [more]
XP_005854951.13.600e-2862.26hypothetical protein NGA_2032100, partial [Nannoch... [more]
XP_009035097.16.400e-1735.33hypothetical protein AURANDRAFT_62846 [Aureococcus... [more]
OLQ11828.11.600e-1531.22hypothetical protein AK812_SmicGene4258 [Symbiodin... [more]
XP_002286022.11.700e-927.57predicted protein [Thalassiosira pseudonana CCMP13... [more]
XP_014160083.12.900e-933.87hypothetical protein SARC_01659 [Sphaeroforma arct... [more]
GAX12448.11.100e-825.90hypothetical protein FisN_2Hh282 [Fistulifera sola... [more]
OMJ92914.17.100e-828.99hypothetical protein SteCoe_4256 [Stentor coeruleu... [more]
CEL92292.19.200e-831.82unnamed protein product [Vitrella brassicaformis C... [more]
XP_023014091.12.100e-730.62SPRY domain-containing protein 7 [Leptinotarsa dec... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL083nonsL083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR121ngnoR121Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003586NSK003586Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G02530.1NO05G02530.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|526228gene_3054Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100036g27gene2445Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G02530.1NO05G02530.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G02530 ID=NO05G02530|Name=NO05G02530|organism=Nannochloropsis oceanica|type=gene|length=735bp
ATGGCCACATTCTTCTGTTCATGCTTGGCCAGCTTAATGGGCGGCGGTGG
TGGCGATGGGGAAGGTAAGGACGACTCAATGAGACCAGGACCAGCAGTGG
AAATGACCCGAGGAAAAAAAGGAAGCTCAGGCTCGGCTGACAACAGAGCG
TTCCCTACCACGCCCCGTGTCAAGCACGACTTGGATATGAAGGGGAGCCA
AGTGCAGGTCAAGACGGCGGCCAACGGATGCTATGTCGTTGCTGGAAAAG
GGCTTGCCATCGCCTCGCTGGCACTCGAGCAAGACTGCTCATTTTGGCAA
GTGAAAGTCCTTAAAGCAGGTCGCTTCAGTATGGGCGTGTCAAGGGCTGT
GGACGCTAAGGTATTAGAAGAAAACGACGAGAAGGGGTCGCTAGAATGGG
CTGTGATTGTGGCTGGCGGCAGTGGTAACGAGATAACGAAGCGGGAGGAG
GCTGCAGAAAAAGATGCCGCAGCTGATAACATGGTGACTGCGCAAGACGG
TCATGTGTTTTCGTGTGTGTTCGATCAATCTTCCTTTCCCATGCTGTGTT
TTTATCAGAATGGGAAGGAATTGGAGGGTAAGGCTGTCAATCGCGTGCGA
GGCTTAGTTTTCCCAGCACTCCAAGTATTCGGGGAGGGGGCGGAGCTCTC
ATTTCTTTTTCACGAAAATGACTGGACTCATCCACCACCCTCAAGCCGGC
ATATGATGATTCTTGAGACGCGGAATATGATTTAA
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protein sequence of NO05G02530.1

>NO05G02530.1-protein ID=NO05G02530.1-protein|Name=NO05G02530.1|organism=Nannochloropsis oceanica|type=polypeptide|length=245bp
MATFFCSCLASLMGGGGGDGEGKDDSMRPGPAVEMTRGKKGSSGSADNRA
FPTTPRVKHDLDMKGSQVQVKTAANGCYVVAGKGLAIASLALEQDCSFWQ
VKVLKAGRFSMGVSRAVDAKVLEENDEKGSLEWAVIVAGGSGNEITKREE
AAEKDAAADNMVTAQDGHVFSCVFDQSSFPMLCFYQNGKELEGKAVNRVR
GLVFPALQVFGEGAELSFLFHENDWTHPPPSSRHMMILETRNMI*
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Synonyms
Publications