NO05G02500, NO05G02500 (gene) Nannochloropsis oceanica

Overview
NameNO05G02500
Unique NameNO05G02500
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3203
Alignment locationchr5:663898..667100 +

Link to JBrowse

Properties
Property NameValue
DescriptionPuff-specific protein bx42
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:663898..667100 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005681spliceosomal complex
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0000398mRNA splicing, via spliceosome
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR017862SKI-int_prot_SKIP
IPR004015SKI-int_prot_SKIP_SNW-dom
Homology
BLAST of NO05G02500 vs. NCBI_GenBank
Match: XP_005852589.1 (SNW domain-containing protein 1 [Nannochloropsis gaditana CCMP526] >EKU23241.1 SNW domain-containing protein 1 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 557.8 bits (1436), Expect = 2.700e-155
Identity = 278/317 (87.70%), Postives = 300/317 (94.64%), Query Frame = 0
Query:    1 MATLGLSRLLPKPIQNYQVHKDDPSPAALARLEIAGKQPIPPYGQRRKGFVPRAVGDFGDGGAFPEVHIIQYPLKMGKKEAEAAPASSQAIVSVDVSADGEVNFDAIVKQGTNRNKIVFSKLSDMKGGDVNQDVLSKPTPEEEAAQAAKTKNALELLIGGKIAAARPVQLAKNPGADEPTYVRYTPNPNAPGFNSNAKQRVIELVEAQVDPMEPARHKHKKVPRGPPDDPVPVLHSPPRKVSVEDQEAWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQETTINPKFAALPQALYIAEDKAREQIAARAKIDQKIK 318
            MATLGLSRLLPKP Q YQVHKDDPSP ALARLEI+GK+ IPPYG+ R GFVPRAVGDFGDGGAFPEVH++QYPL MGKK+A +A   S AIVSVDV+ADG+VNFDAIV+QGTNRNKIV SKLSDM+GGD +++VLSKPTPEEEA QAAKTK+ALE LIGGKIAAARPVQLAK PG++EPTYVRYTPNPNAPG+N+NAKQRVIELV+AQVDPMEPA+HKHKKVPRGPP+DPVPVLHSPPRKVSVEDQEAWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQETTINPKFAALPQALYIAEDKAREQIAARAKIDQKIK
Sbjct:    1 MATLGLSRLLPKPTQTYQVHKDDPSPTALARLEISGKKVIPPYGE-RNGFVPRAVGDFGDGGAFPEVHVVQYPLNMGKKDAASA---SNAIVSVDVAADGKVNFDAIVRQGTNRNKIVHSKLSDMRGGDADENVLSKPTPEEEAEQAAKTKSALEALIGGKIAAARPVQLAKAPGSEEPTYVRYTPNPNAPGYNTNAKQRVIELVDAQVDPMEPAKHKHKKVPRGPPEDPVPVLHSPPRKVSVEDQEAWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQETTINPKFAALPQALYIAEDKAREQIAARAKIDQKIK 313          
BLAST of NO05G02500 vs. NCBI_GenBank
Match: EWM28131.1 (puff-specific protein bx42 [Nannochloropsis gaditana])

HSP 1 Score: 557.8 bits (1436), Expect = 2.700e-155
Identity = 278/317 (87.70%), Postives = 300/317 (94.64%), Query Frame = 0
Query:    1 MATLGLSRLLPKPIQNYQVHKDDPSPAALARLEIAGKQPIPPYGQRRKGFVPRAVGDFGDGGAFPEVHIIQYPLKMGKKEAEAAPASSQAIVSVDVSADGEVNFDAIVKQGTNRNKIVFSKLSDMKGGDVNQDVLSKPTPEEEAAQAAKTKNALELLIGGKIAAARPVQLAKNPGADEPTYVRYTPNPNAPGFNSNAKQRVIELVEAQVDPMEPARHKHKKVPRGPPDDPVPVLHSPPRKVSVEDQEAWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQETTINPKFAALPQALYIAEDKAREQIAARAKIDQKIK 318
            MATLGLSRLLPKP Q YQVHKDDPSP ALARLEI+GK+ IPPYG+ R GFVPRAVGDFGDGGAFPEVH++QYPL MGKK+A +A   S AIVSVDV+ADG+VNFDAIV+QGTNRNKIV SKLSDM+GGD +++VLSKPTPEEEA QAAKTK+ALE LIGGKIAAARPVQLAK PG++EPTYVRYTPNPNAPG+N+NAKQRVIELV+AQVDPMEPA+HKHKKVPRGPP+DPVPVLHSPPRKVSVEDQEAWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQETTINPKFAALPQALYIAEDKAREQIAARAKIDQKIK
Sbjct:   35 MATLGLSRLLPKPTQTYQVHKDDPSPTALARLEISGKKVIPPYGE-RNGFVPRAVGDFGDGGAFPEVHVVQYPLNMGKKDAASA---SNAIVSVDVAADGKVNFDAIVRQGTNRNKIVHSKLSDMRGGDADENVLSKPTPEEEAEQAAKTKSALEALIGGKIAAARPVQLAKAPGSEEPTYVRYTPNPNAPGYNTNAKQRVIELVDAQVDPMEPAKHKHKKVPRGPPEDPVPVLHSPPRKVSVEDQEAWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQETTINPKFAALPQALYIAEDKAREQIAARAKIDQKIK 347          
BLAST of NO05G02500 vs. NCBI_GenBank
Match: CBJ26368.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 350.5 bits (898), Expect = 6.400e-93
Identity = 179/325 (55.08%), Postives = 231/325 (71.08%), Query Frame = 0
Query:   10 LPKPIQNYQVHKDDPSPAALARLEIAGKQPIPPYGQRRKGFVPRAVGDFGDGGAFPEVHIIQYPLKMGKKEAEAAP------------------ASSQAIVSVDVSADGEVNFDAIVKQGTNRNKIVFSKLSDMKGGDVNQDVLSKPTPEEEAAQAAKTKNALELLIGGKIAAARPVQLAKNPGADEPTYVRYTPNPNAPGFNSNAKQRVIELVEAQVDPMEPARHKHKKVPRGPPDDPVPVLHSPPRKVSVEDQEAWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQETTINPKFAALPQALYIAEDKAREQIAARAKIDQKI 317
            LP P   Y+VH D+      + L  A K  +PPYGQ R+ FVPRA  DFGDGGAFPE+H+ Q+PL+MG+   + A                   + S AIV+VDV  +G+V  DAIVKQGTNR+KIV+S+LS++K    + + L  PT +EEA  A +T+ A E LIG K+ +A P  +  +    E  +++YTPNPNAPG+N+NAKQRV+ +V AQVDPMEP +HKHKKVPR P DDPVPVLHSPPRKV+V+DQ+AWKIPPC+SNWKNA+GYTIPLDKRLAADGRGLQE T++P FA L ++LYIAE KARE+   R ++ +++
Sbjct:    6 LPAPRHKYEVHADE---GLSSLLPPAPKHKVPPYGQ-RQSFVPRAQADFGDGGAFPEIHVAQFPLEMGRPATKKAXXXXXXXXXXXXXXXXXXNSGSTAIVAVDVDENGKVKHDAIVKQGTNRDKIVYSQLSNIKEKRGDVEKLQAPTADEEALTAERTRQAFEKLIGAKVTSATPGSIG-DQTRKEAEFIKYTPNPNAPGYNNNAKQRVVRMVAAQVDPMEPPKHKHKKVPRAPADDPVPVLHSPPRKVTVQDQQAWKIPPCVSNWKNARGYTIPLDKRLAADGRGLQENTVSPNFATLSESLYIAERKAREETRLRGEMLKQV 325          
BLAST of NO05G02500 vs. NCBI_GenBank
Match: XP_009034306.1 (hypothetical protein AURANDRAFT_52680 [Aureococcus anophagefferens] >EGB10717.1 hypothetical protein AURANDRAFT_52680 [Aureococcus anophagefferens])

HSP 1 Score: 331.6 bits (849), Expect = 3.100e-87
Identity = 172/313 (54.95%), Postives = 223/313 (71.25%), Query Frame = 0
Query:    6 LSRLLPKPIQNYQVHKDDPSPAALARLEIAGKQPIPPYGQRRKGFVPRAVGDFGDGGAFPEVHIIQYPLKMGKKEAEAAPASSQAIVSVDVSADGEVNFDAIVKQGTNRNKIVFSKLSDMKGGDVNQDVLSKPTPEEEAAQAAKTKNALELLIGGKIAAARPVQL--AKNPGADEPTYVRYTPNPNAPGFNSNAKQRVIELVEAQVDPMEPARHKHKKVPRGPP----DDPVPVLHSPPRKVSVEDQEAWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQETTINPKFAALPQALYIAEDKAREQIAARAKI 313
            LSR LP P + Y V KD+      A         IP YG RR GFVPR++GDFGDGGA+PEVH+ QYPL MG K  E A +SS A+V+++V  DG V +DAIVKQG N+ +IV + L D+K  +  +D L+ P+ E EAA A +T+ AL  ++ GKI +A+P  +  A +P   + T+VRYTPNP+APG++++A QR+++LV+ QVDPM P +HKH K+PRGPP          LHSPPRKV+V DQ++WKIPPC+SNWKNA+GYTIPLDKRLAADGRGLQE T+N  FA L +ALYIAE  AR+ + ARA+I
Sbjct:   10 LSRALPTPAREYVVWKDEDKRKKSAPGTARTTAKIPGYGSRR-GFVPRSLGDFGDGGAYPEVHVAQYPLGMGTK--EEARSSSTAVVALEVGEDGAVKYDAIVKQGENKGRIVQTSLEDVKEKEGAEDALALPSAEAEAAAAQRTQAALGAILDGKINSAKPTHVPEACDPNRQKATFVRYTPNPSAPGYSASASQRIVKLVDQQVDPMAPPKHKHTKIPRGPPXXXXXXXXXXLHSPPRKVTVHDQQSWKIPPCVSNWKNARGYTIPLDKRLAADGRGLQEQTVNNDFATLAEALYIAERSARDDVRARAQI 319          
BLAST of NO05G02500 vs. NCBI_GenBank
Match: XP_019873101.1 (PREDICTED: LOW QUALITY PROTEIN: puff-specific protein Bx42 [Aethina tumida])

HSP 1 Score: 313.5 bits (802), Expect = 8.700e-82
Identity = 172/326 (52.76%), Postives = 225/326 (69.02%), Query Frame = 0
Query:    4 LGLSRLLPKPIQNYQVHKDD---------PSPAALARLEIAGKQPIPPYGQRRKGFVPRAVGDFGDGGAFPEVHIIQYPLKMGKKEAEAAPASSQAIVSVDVSADGEVNFDAIVKQGTNRNKIVFSKLSDM---KGGDVNQDVLSKPTPEEEAAQAAKTKNALELLIGGKIAAARPVQLAKNPGADEPTYVRYTPNPNAPGFNSNAKQRVIELVEAQVDPMEPARHK-HKKVPRGPPDDPVPVLHSPPRKVSVEDQEAWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQETTINPKFAALPQALYIAEDKAREQIAARAKIDQKI 317
            + LS +LP P+Q      DD         PS A ++   IA     PPYGQRR G+VPR V D+GDGGAFPE+H+ QYPL+MGKK ++ + +++   ++V +  DG+V +DAI +QG +++KIV+SKLSD+   +  D N   L KP  EE      +T+ AL  +   KIAAA PV+ A+  G  E  ++RYTP+     FNS AKQRVI LVEAQVDPMEP R K +KK+PRGPP  P PVLHSP R+V+V++Q+ WKIPPCISNWKNAKGYT+PLDKRLAADGRGLQ+  IN  FA L +ALYIA+ KARE +  RA++++K+
Sbjct:    1 MDLSSILPAPVQPVWDRDDDRRAKLASQKPSTALVSAQSIA-----PPYGQRR-GWVPRNVTDYGDGGAFPEIHVAQYPLEMGKKNSKDSTSNA---LAVQLGPDGKVKYDAIARQGHSKDKIVYSKLSDLLPVEVVDENDPSLEKPPQEEVDDITERTRQALMKITNSKIAAAMPVRHAERQGPAE--FIRYTPSQQGAAFNSGAKQRVIRLVEAQVDPMEPPRFKINKKIPRGPPSPPAPVLHSPTRRVTVKEQKEWKIPPCISNWKNAKGYTVPLDKRLAADGRGLQQQHINENFAKLAEALYIADRKAREAVETRAQLEKKL 315          
BLAST of NO05G02500 vs. NCBI_GenBank
Match: XP_971504.1 (PREDICTED: puff-specific protein Bx42 [Tribolium castaneum] >EEZ99094.1 Puff-specific protein Bx42-like Protein [Tribolium castaneum])

HSP 1 Score: 309.7 bits (792), Expect = 1.300e-80
Identity = 169/319 (52.98%), Postives = 218/319 (68.34%), Query Frame = 0
Query:    6 LSRLLPKPIQNYQVHKDD----PSPAALARLEIAGKQPIPPYGQRRKGFVPRAVGDFGDGGAFPEVHIIQYPLKMGKKEAEAAPASSQAIVSVDVSADGEVNFDAIVKQGTNRNKIVFSKLSDMKGGDV---NQDVLSKPTPEEEAAQAAKTKNALELLIGGKIAAARPVQLAKNPGADEPTYVRYTPNPNAPGFNSNAKQRVIELVEAQVDPMEPARHK-HKKVPRGPPDDPVPVLHSPPRKVSVEDQEAWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQETTINPKFAALPQALYIAEDKAREQIAARAKIDQKI 317
            LS LLP PIQ      D+     +    +   +  +   PPYGQRR G+VPR   D+GDGGAFPE+H+ QYPL MG+K  E    S+   ++V + A+G+V +D I +QG  ++KIV+SKLSD+   +V   N   L+KP+ EE      KT+ AL+ L   KIAAA PV+ A+  G  E  ++RYTP+     FNS AKQRVI LVEAQVDPMEP R K +KK+PRGPP  P PVLHSP R+V+V++Q+ WKIPPCISNWKNAKGYT+PLDKRLAADGRGLQ+  IN  FA L +ALYIA+ KARE +  RA++++K+
Sbjct:    3 LSSLLPAPIQPVWDRDDERRQQNATTQRSTSVVTAQSIAPPYGQRR-GWVPRVHTDYGDGGAFPEIHVAQYPLDMGRKGKE----STSNALAVQLDAEGKVKYDVIARQGHGKDKIVYSKLSDLLPVEVTTENDPSLAKPSQEEIEDITEKTRQALQRLTNSKIAAAMPVRCAEKQGPAE--FIRYTPSQQGAAFNSGAKQRVIRLVEAQVDPMEPPRFKINKKIPRGPPSPPAPVLHSPTRRVTVKEQKEWKIPPCISNWKNAKGYTVPLDKRLAADGRGLQQLHINENFAKLAEALYIADRKAREAVETRAQLEKKL 314          
BLAST of NO05G02500 vs. NCBI_GenBank
Match: KRT81670.1 (hypothetical protein AMK59_6058 [Oryctes borbonicus])

HSP 1 Score: 308.5 bits (789), Expect = 2.800e-80
Identity = 168/319 (52.66%), Postives = 217/319 (68.03%), Query Frame = 0
Query:    4 LGLSRLLPKPIQNYQVHKDDPSPAALAR-LEIAGKQPI-PPYGQRRKGFVPRAVGDFGDGGAFPEVHIIQYPLKMGKKEAEAAPASSQAIVSVDVSADGEVNFDAIVKQGTNRNKIVFSKLSDMKGGDV---NQDVLSKPTPEEEAAQAAKTKNALELLIGGKIAAARPVQLAKNPGADEPTYVRYTPNPNAPGFNSNAKQRVIELVEAQVDPMEPARHK-HKKVPRGPPDDPVPVLHSPPRKVSVEDQEAWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQETTINPKFAALPQALYIAEDKAREQIAARAKIDQKI 317
            + LS +LP P Q+     DD       +   I   QPI PPYGQRR G+VPR   D+GDGGAFPE+H+ QYPL MG K  E    S+   ++V + A+G+V +D I +QG +++KIV+SKLSD+   +V   N   L KP  +E      KT++AL+ +   KIAAA PV+ A+     +  ++RYTP+     FNS AKQRVI LVEAQVDPMEP R K +KK+PRGPP  P PVLHSP R+V+V++Q  WKIPPCISNWKNAKGYT+PLDKRLAADGRGLQ+  IN  FA L +ALYIA+ KARE +  RA++++K+
Sbjct:    1 MSLSSILPPPTQSIWDRDDDRRLKEQEKSTSIIVAQPIAPPYGQRR-GWVPRKQSDYGDGGAFPEIHVAQYPLDMGLKNKE----STSNALAVKLDAEGKVKYDVIARQGHSKDKIVYSKLSDLLPVEVMSENDPTLEKPNEDEVEDITEKTRHALQRITNSKIAAAMPVRCAEKQAPSQ--FIRYTPSQQGAAFNSGAKQRVIRLVEAQVDPMEPPRFKINKKIPRGPPSPPAPVLHSPTRRVTVKEQREWKIPPCISNWKNAKGYTVPLDKRLAADGRGLQQLHINENFAKLAEALYIADRKAREAVETRAQLEKKL 312          
BLAST of NO05G02500 vs. NCBI_GenBank
Match: XP_022907829.1 (puff-specific protein Bx42 [Onthophagus taurus])

HSP 1 Score: 308.5 bits (789), Expect = 2.800e-80
Identity = 165/319 (51.72%), Postives = 218/319 (68.34%), Query Frame = 0
Query:    4 LGLSRLLPKPIQNYQVHKDDPSPAALARLE--IAGKQPIPPYGQRRKGFVPRAVGDFGDGGAFPEVHIIQYPLKMGKKEAEAAPASSQAIVSVDVSADGEVNFDAIVKQGTNRNKIVFSKLSDMKGGDV---NQDVLSKPTPEEEAAQAAKTKNALELLIGGKIAAARPVQLAKNPGADEPTYVRYTPNPNAPGFNSNAKQRVIELVEAQVDPMEPARHK-HKKVPRGPPDDPVPVLHSPPRKVSVEDQEAWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQETTINPKFAALPQALYIAEDKAREQIAARAKIDQKI 317
            + L+ +LP P Q+    +DD   A   +    +      PPYGQRR G++PR + D+GDGGAFPE+H+ QYPL+MG K  E    S+   ++V + A+G+V +D I +QG  ++KIV+SKLSD+   +V   N   L KP+ EE      KT+ +L  +   KIAAA PV+ A++ G  E  ++RYTP+     FNS AKQRVI LVEAQVDPMEP R K +KK+PRGPP  P PVLHSP R+V+V++Q  WKIPPCISNWKNAKGYT+PLDKRLAADGRGLQ+  IN  FA L +ALYIA+ KARE +  RA++++K+
Sbjct:    1 MSLTSILPAPTQSIW-DRDDEKRANEKKTSAVVIAHHIAPPYGQRR-GWIPRKLSDYGDGGAFPEIHVAQYPLEMGMKNKE----STSNAIAVQLDAEGKVKYDVIARQGHGKDKIVYSKLSDLLPVEVMAENDPSLEKPSEEEIEDLTEKTRQSLMRITNSKIAAAMPVRCAESQGPSE--FIRYTPSQQGAAFNSGAKQRVIRLVEAQVDPMEPPRFKINKKIPRGPPSPPAPVLHSPTRRVTVKEQREWKIPPCISNWKNAKGYTVPLDKRLAADGRGLQQQHINENFAKLAEALYIADRKAREAVETRAQLEKKL 311          
BLAST of NO05G02500 vs. NCBI_GenBank
Match: OQV15427.1 (SNW domain-containing protein 1 [Hypsibius dujardini])

HSP 1 Score: 308.1 bits (788), Expect = 3.700e-80
Identity = 165/319 (51.72%), Postives = 220/319 (68.97%), Query Frame = 0
Query:    6 LSRLLPKPIQNYQVHKDDP----SPAALARLEIAGKQPIPPYGQRRKGFVPRAVGDFGDGGAFPEVHIIQYPLKMGKKEAEAAPASSQAIVSVDVSADGEVNFDAIVKQGTNRNKIVFSKLSDMKGGDVNQD---VLSKPTPEEEAAQAAKTKNALELLIGGKIAAARPVQLAKNPGADEPTYVRYTPNPNAPGFNSNAKQRVIELVEAQVDPMEPARHK-HKKVPRGPPDDPVPVLHSPPRKVSVEDQEAWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQETTINPKFAALPQALYIAEDKAREQIAARAKIDQKI 317
            L+ LLP P     VH  D     + AA  +  +   + +PPYG  R G+VPR+  DFGDGGAFPE+HI QYPL+MG+K+ E + A     ++V V   G + +DAI++QG N++K+++SK  D+    +  +    L KP  EE A    +T+NAL+ ++  KI AA PV+ A+N G D+  ++RYTP+    GFNS AKQRVI LVE Q DPMEP + K +KK+P+GPP  P PV+HSPPRKVSV+DQ  WKIPPCISNWKNAKGYTIPLDKRLAADGRGLQ+  IN  FA L ++LYI++ KARE + ARA++++K+
Sbjct:    4 LTSLLPAP--TLTVHDRDSEKRRTSAADQKALVTRFKQVPPYG-HRSGYVPRSAEDFGDGGAFPEIHIAQYPLEMGRKKTEKSNA-----LAVPVDDTGSIKYDAILRQGKNKDKVIYSKFQDLVPKPIRNESAPELQKPDEEEIAKLTEETRNALQGMVERKIQAAMPVRRAENLGPDQ--FIRYTPSQQGDGFNSGAKQRVIRLVEVQQDPMEPPKFKINKKLPKGPPSPPAPVMHSPPRKVSVQDQADWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQQIHINENFAKLAESLYISDRKAREAVEARAQLERKL 312          
BLAST of NO05G02500 vs. NCBI_GenBank
Match: XP_018327577.1 (PREDICTED: puff-specific protein Bx42 [Agrilus planipennis])

HSP 1 Score: 306.2 bits (783), Expect = 1.400e-79
Identity = 167/316 (52.85%), Postives = 218/316 (68.99%), Query Frame = 0
Query:    6 LSRLLPKPIQNYQVHKDDPSPAALARLEIAGKQPI-PPYGQRRKGFVPRAVGDFGDGGAFPEVHIIQYPLKMGKKEAEAAPASSQAIVSVDVSADGEVNFDAIVKQGTNRNKIVFSKLSDMKGGDV---NQDVLSKPTPEEEAAQAAKTKNALELLIGGKIAAARPVQLAKNPGADEPTYVRYTPNPNAPGFNSNAKQRVIELVEAQVDPMEPARHK-HKKVPRGPPDDPVPVLHSPPRKVSVEDQEAWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQETTINPKFAALPQALYIAEDKAREQIAARAKIDQKI 317
            L+RLLP P Q     +DD     +    +   QPI PPYGQRR G++PR + DFG+GGAFPE+H+ QYPL+MG+K  E    S    ++V + A+G+V +D I +QG +++KIV+SKLSD+   +V   N   L KP  EE      KT+ AL  +   KI AA PV+ A+  G  +  ++RYTP+     FNS AKQRVI LVEAQVDPMEP + K +KK+PRGPP  P PVLHSP R+V+V++Q+ WKIPPCISNWKNAKGYT+PLDKRLAADGRGLQ+  IN  FA L +ALYIA+ KARE +  RA++++K+
Sbjct:    4 LTRLLPAPSQ-ITWDRDDERRENIHESALVIAQPIAPPYGQRR-GWIPRRLTDFGEGGAFPEIHVAQYPLEMGQKGKE----SISNALAVQLDAEGKVKYDMIARQGHSKDKIVYSKLSDLLPAEVVAENDPSLCKPPQEELDEITEKTRQALMKITNSKITAAMPVRCAEKQGPAQ--FIRYTPSQQGAAFNSGAKQRVIRLVEAQVDPMEPPKFKINKKIPRGPPSPPAPVLHSPTRRVTVKEQKEWKIPPCISNWKNAKGYTVPLDKRLAADGRGLQQLHINENFAKLAEALYIADRKAREAVETRAQLERKL 311          
The following BLAST results are available for this feature:
BLAST of NO05G02500 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005852589.12.700e-15587.70SNW domain-containing protein 1 [Nannochloropsis g... [more]
EWM28131.12.700e-15587.70puff-specific protein bx42 [Nannochloropsis gadita... [more]
CBJ26368.16.400e-9355.08conserved unknown protein [Ectocarpus siliculosus][more]
XP_009034306.13.100e-8754.95hypothetical protein AURANDRAFT_52680 [Aureococcus... [more]
XP_019873101.18.700e-8252.76PREDICTED: LOW QUALITY PROTEIN: puff-specific prot... [more]
XP_971504.11.300e-8052.98PREDICTED: puff-specific protein Bx42 [Tribolium c... [more]
KRT81670.12.800e-8052.66hypothetical protein AMK59_6058 [Oryctes borbonicu... [more]
XP_022907829.12.800e-8051.72puff-specific protein Bx42 [Onthophagus taurus][more]
OQV15427.13.700e-8051.72SNW domain-containing protein 1 [Hypsibius dujardi... [more]
XP_018327577.11.400e-7952.85PREDICTED: puff-specific protein Bx42 [Agrilus pla... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL083nonsL083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR121ngnoR121Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003585NSK003585Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G02500.1NO05G02500.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|669860gene_3053Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100036g26gene2446Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G02500.1NO05G02500.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G02500 ID=NO05G02500|Name=NO05G02500|organism=Nannochloropsis oceanica|type=gene|length=3203bp
CCTCCTCCTCCTCCTCCTCCTCCTCCTCCTTCTTGCTTCCACTGCTTCGC
CTCAATTTTTGGCTGCTGCCGTTCCACTCGCTATGACCCTTCACACGCTT
ACTCCCAACTCCACCACCGCCTCCCTTCCTGTCCTTTCCATCTTCTTTCT
CCTTCCTGCCCTTTCCATCTTCTCTCTCCAAATGGTGCCGCTTCTCATTC
CTCTTTTCCTTCTCCCTTCTTCTCTCCCGATCCCAGTCCACATTCACATC
AGGTGCCCCAACGTCTACAGGCCATCGATGTTCCTCTCTACCTCCTTTGC
TCTCTTTGTGCTGAGGATGACGATGGTGGTGCGAAGAGTGATGAAGCTCA
GGATGATAACCACGACTGCTTCCCCCTCTTTCTCTCTCCATGCTTCGGCT
TCGACTGCGTTTGTTCATTCCTTCGCCACTACCCCGTCGTCGTTCTCGGT
TTCGTTCTCTTGCTTCACGACTTCTCGAACGTCTCCCTCGTTCTCGGTAG
TGGTGGTGGTGCTGGTGGGAAGGAGGAGGCAGACGACGGTTAGGGATGAC
TTCATTCCCTCGTCGGCTGGGACTCCGAGAATGTGAGCGGGAACGATCCC
TCCCCACGCCCATGATAAGCTGTATTATTATCAATTAAAGGGGAAAAGGA
AAGAAGTAGAGTGGAGTGAGTGAGATTTATGGTGAATGTGATGTCTAAAG
TTGTAGTCCAGTACAACCACCACCATCGTCGCCATCATCGCTCACACAGC
TCCTACTTTTGACGCCCGCGGCGAATACACAACGCGTGCAGCAGTTGAGC
AAGGATAACGTGTTGATGTTATACCTAAAGGACGTCTCCGCCTTTCAAAC
TCCTCCATCCTCTGTCGTTGATGTGCCTACTGCCCTCCCCCGGAGGCGCA
TTGCTGTTATAGGCGCCTGGGCCCTCCTTCCCAGCGACATTTGTTTAAAA
AAAGAAGGGAAACTTTTTTCTGCAATGATACACAATGGGAGTGGGGGGGG
AAGAAGGGGAGGCGTATGAGTACGATGTCTGTGAAGGACTTGTGCATGCC
AGGTGAAGCTCATCATAAAGCATCCCCTCGTCTCTATCTCCTTGCTGTCG
CAGTCCTTACCACCCATGGGTAGGGGCGTGGGAAGGCCGGTTGATGCTGA
TGCGGCAGCAGGAGATGACGATGGTGGTGGTGGTGGTATCATAAAGGAGT
CTTGCGAGCGAGGTCATGGAGAGGAGCGAGTGGAGAAATCTGGGGAAAGG
ATCCCGTCCGAGAAGATGGGGCGCCGCAGACGGATTGAAAGGGCTCGTGA
GCTTGTCAATCCAGTAATTGTCTATGTCGTGGGCGAAGAAGTGGAAGAAA
GGAGGCGGAGGAGGAGGAGGAGGAGAAGGAGGAGGAGGAGAAGGAGGAGG
AGGAGAGAAGACGGAGGAGAAAGGCGGCGATGCCACTGGCTCGGGAGACA
GTCAGTGACGAAGCTTCCTGTGGCATTCCTTTCCTCACATTAATTCACGT
TTGTCGTACAGGCACAAGCATCACCAGCTTTTTCTCATCGTCCTTGCGGG
AACTGCAGCGGGGACTGGTCGTGTCCTCTGCTGCGGATGAGGGAAGCTGC
GAAGCGCTCAGAAGCAACTTGCCAAACTCGAAAGCCACCCTGATAGGCCT
CCTCTCACTTCATCAGCTCGTGACATCGCGGCTGCCGGCAGCGTCACTCA
CTCCCGCACCACACGCCAAACGCACAATTTACAGACGTCTCTACACCATC
TTTGTTGCATCGAACATCCAGTAGTTTCACGCGCGGCCGAGTCACCACCA
CTGGCAAAACGATGGCGACCCTCGGCTTGTCCCGGCTGCTGCCCAAGCCG
ATACAGAACTATCAAGTCCACAAAGACGACCCCTCCCCAGCCGCCTTGGC
ACGCCTCGAGgtaaggacatgagagatttggggtgttgtggtgtacaggg
gactcatgccttgttctctgtaagtgcaaatgtcgggcatccccttctcc
ctccctccccatcatatcatcacaccttctcacccgcacatggagtggaa
ggctagcggcttcataaaattgcaaatagcaaaacttgtggttctacatc
ctaccagtctgtatcgtgtcaatgcgaagcaccaatctcacccgcccttc
cccccaccgaacatgcagATCGCCGGCAAGCAACCCATCCCGCCCTACGG
CCAACGCAGGAAAGGCTTCGTGCCCCGTGCCGTGGGCGATTTTGGAGATG
GAGGAGCGTTTCCCGAAGTACATATTATACAATATCCTCTGAAAATGGGT
AAAAAAGAGGCGGAGGCTGCACCTGCCTCCTCCCAAGCCATCGTCTCTGT
CGATGTCTCCGCCGACGGCGAGGTCAATTTTGACGCCATTGTTAAACAAG
GCACGAACCGCAACAAAATCGTCTTCTCCAAGCTTTCGGACATGAAAGGA
GGGGATGTAAATCAAGATGTGCTCTCGAAGCCCACCCCCGAAGAAGAGGC
AGCCCAGGCTGCAAAAACCAAAAACGCCCTCGAGCTCCTCATTGGAGGGA
AAATCGCTGCGGCCCGCCCTGTGCAACTGGCAAAGAACCCCGGTGCGGAC
GAGCCAACTTATGTCCGTTACACGCCTAATCCTAACGCCCCTGGTTTCAA
TTCCAACGCAAAACAACGCGTCATCGAGCTGGTAGAAGCCCAAGTCGACC
CCATGGAGCCCGCCCGGCACAAGCACAAGAAAGTCCCCCGTGGCCCCCCT
GACGACCCCGTGCCCGTCCTCCACTCTCCCCCTCGCAAAGTCAGTGTGGA
GGACCAAGAAGCCTGGAAGATTCCCCCTTGCATCTCTAACTGGAAGAACG
CCAAGGGCTACACAATTCCCCTCGACAAGCGCCTGGCTGCTGATGGCCGC
GGCCTGCAAGAAACGACCATCAACCCCAAATTCGCGGCCTTGCCTCAAGC
ATTGTACATCGCGGAGGATAAAGCGCGAGAACAGATTGCGGCTCGGGCGA
AGATTGACCAGAAAATCAAAAAGTTGGAGAGGGAGCAGAAGGAGCAGGAG
CTGCGGGAGTTGGCGGCCAGGTCACGGATGGCCAGGGCGGGCATCAATGT
GGCAGCGGGTGAAGGAGGAGATGGGGGGCAAAGAAGGGAGAGGGAGGAGA
GCTACTACGGGCGGGGGGCAGCAGGAGGAGGGGGAGGGGGCGAGGGGGTT
TAG
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protein sequence of NO05G02500.1

>NO05G02500.1-protein ID=NO05G02500.1-protein|Name=NO05G02500.1|organism=Nannochloropsis oceanica|type=polypeptide|length=378bp
MATLGLSRLLPKPIQNYQVHKDDPSPAALARLEIAGKQPIPPYGQRRKGF
VPRAVGDFGDGGAFPEVHIIQYPLKMGKKEAEAAPASSQAIVSVDVSADG
EVNFDAIVKQGTNRNKIVFSKLSDMKGGDVNQDVLSKPTPEEEAAQAAKT
KNALELLIGGKIAAARPVQLAKNPGADEPTYVRYTPNPNAPGFNSNAKQR
VIELVEAQVDPMEPARHKHKKVPRGPPDDPVPVLHSPPRKVSVEDQEAWK
IPPCISNWKNAKGYTIPLDKRLAADGRGLQETTINPKFAALPQALYIAED
KAREQIAARAKIDQKIKKLEREQKEQELRELAARSRMARAGINVAAGEGG
DGGQRREREESYYGRGAAGGGGGGEGV*
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Synonyms
Publications