NO05G01940, NO05G01940 (gene) Nannochloropsis oceanica

Overview
NameNO05G01940
Unique NameNO05G01940
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2900
Alignment locationchr5:529782..532681 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:529782..532681 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO05G01940 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL086nonsL086Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR118ngnoR118Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003674NSK003674Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G01940.1NO05G01940.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100004g118gene2369Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G01940.1NO05G01940.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G01940 ID=NO05G01940|Name=NO05G01940|organism=Nannochloropsis oceanica|type=gene|length=2900bp
TGTTTGGTCTCCCTTTTTACTTTCCAACAGGGCCAGTGCCGAGGAGGAGT
GTGGGAGCGGTGTGGGAGCATACCGCGGGCAATCGTCGTCATCCGATTCT
GTCACCGGCCTCGCGTTTTCTGTGTGTTCCTTGGGGTCCTTCGGTCCGCG
CTCCTTCAAAACTTGAGCTATCCCACGCGTTGTTACCCACACCACCTCTC
ACTCTGCCCTAACCTAGACGCGCTAAATCGCCCTGCTTCCTCGCGTTCCC
TCCCAGTTGTCGGTCCCACCATAACTATCACACGCATCGCCAACGCCTCT
CTTTCTTTCATTCCTCCTGCACGCTTTCAGACAGGTGGGAACCATGCGCT
ACAGCCTGCGTGCGATCGTGGACCAGGTCCTGCAGGAGCGTGGGGGGCGG
CCACTTGATCTCAAGTTTTCCTTCTCCGGGCCTACCAAGCAGACCACGGC
GAAAACGAGGACGCACCACCGACCATCTCGTCACCAAGGACCATCCCTCG
CGATGGCGGCCGACACTTCCTGGGATTACCGAGAGGAGGACTCGTCGTTG
CCGTCCTCCTCTTTGATCACGTCTCCACTCCCGGACGCGAAAAGAATGAA
GAAAAGCCTGAAGAAAAAGGAGACGAAGGCCCACAAGGAGAAGGATCGGA
AAGTTAAGAACAAGACGCAGACACACGAAAGCAAACGCCGAATGCGTGAC
GAGGAGGAAGAGGAGGAGGAGGAGATGGTGGGTGACGAGGTGCTGGTGGA
GGAGGAGAGTCGCGTGACCGCAGCAGCGCTAAGGAAGCAACCGAACCTGG
AGCAGCGTCAACAGGAGAAGAAGAGCAAGCCCCAACACTACGAAGTCATG
TGGGTCCCCATGGCGGGCGACGGCAAGTCTTCCTCCGGCCATGACAAGGA
CAAGCAGCAACAACGACATCAACGACGACAACAACAGCACGGGGGGATCA
TTGACGTAAGCCCCAAGGCTCCTCGTTCCGCGTCTGACCTGCAGAAGGAG
CAGCAATTTCTAGCCCGTCGCGAGAAGCAACGGCAGCAGCAGCAGCTGCA
GCAGAAGATGAAATGGCGCAAGGGACCTGCGGAGAATGAAGAAAAGAAGG
CAAATGCGGAGGAGGAGGGGAGGGGAGAGGGAAGGCTGGTGGCGGCTGTA
ACGGTGACCCGCGAGAAGAAGCAGAAGCAGCCAACTCGCAAGGAGAGCGA
GGAGGACGACGAGAGAGTAAAGAAGGGACAAAACATTGTAGGAAAGGACG
GAGGAAGAAAACGAGGAGAGATAAAAAGCGACTGGAAGCGACCAGAAGCT
GGTGCTGGTGGAGTGGTACGGCAGCATCCCAAAGAGGTGAAGGTCTCAGC
AGCGGCCACGACCACTGCACGGCCAAAAGAGCGAAAGAAGGAAAGGAGGG
AAGAAAGGAGAAGAAGGTCGACAACAGCACGCATTGCATCGGGAATGAGT
GAAGAAAAGATGGAGCTGGAGGAGCAGCTGCTGGAGTACCTTCCCTCTCC
AGTGTATGAGGAAGAGGATGAGAAGGAAGACGACTTTGCACAGGAGCGAT
TCCAGGAGCAGCAATGCCAGCAGCGGCAGCAGCCGCAGCAGCGCTTTGAT
AAAGGAAAGGAGCAGGTTGAGGAGAAAGGAACGAAGGAGGGATGTGGTCT
ACAGGAGCAGATGTCGTCGTTGGAAGCCCAGGTGGCGGCGATTGAGCGGA
TGTTGCGGCGTGACCGAGGAAGGGACCAGAGAGAGGATGAAGATAAAGAT
GAGGATGAGGATGAGGATGAGGATGGGGAGAGAAAGGCGGTAGACGGGAG
TCCGATGCTTCACCTTCGAAGACGACATCTTGCTTTTGATGATGACAAAG
AGGAGGAAGAGGAGGAAGAAGAAAAGGAGGAGGAGGATAATGTCATCAAC
AACGTCAAAGGGCAACCTGCGGCTTACCTACCTGCGCTGTCGTCCGCGTC
ATCTTCGGATGTCGAAGAGGATGAAGAAGAGGAGGAGGGGGAGGTTATGG
AGAGCCCCCTCTCGATGGTGGGGGGATTGGAAGCTCGTCTTGCTAGCCTG
GAAATTGACTATCTGAAGAGCAATCCACGGGCACGACGACGAATGGAGGA
GGATGCAAGGGAAGCGTGCGAAGCACGGCAGGCACGCCTTCGCTCCCAGG
CGGTGTTTGACGCCAAGATGCGCACGTTGGGCGGAGAGTTGGAGGAGGTG
GGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGGAGGAGGAGGA
GGAGATGGAAATTGGGGAGGGGAAGAGTGGACATGGTTTATTTGGGAACA
ATTCAGTGAAAGAGACTCCCCGTCCATCAGAACACTACACGGCGGGCTTG
GTACAAGGCGAGAAACTGAAGCAGAAGATTAAGATGAAGGGATCAGTGCG
CGGAGGGGGAGGTGGAGGGGTGGATGGTTATGACAGCATTCAATCGTTGC
TTGCGCAGCTTCAAGAACTTCAAGAAGAATTTGTGGCGCCCGATATTTTT
GCTTCGTCTACGACAGCGACAGGACAAGAAGGAAGGGCGAGCGAGGATGG
CGGGAAGGTCAAGTTAATCGCTTCCTTCTCCTCAGCGGCGTCGGGTGAAG
AATTTGAAGGGGGTATGAGCGGGGCTACCGATTTGAGTATGCGGGAAGAG
CAGTTAGATGCCTTGGAAGCTCGGTTAGCGGGGATTACGGCGCTGATTCG
AAGCGAGCTGCCGCGATGAGTGCATACGACTTGGTCGAAGGGGGAGGGCA
GAAATGAGTGAAAGGAAGCGAAGTGAAAAACCTGTGGGGTGATGACAACT
TGAAAACATAAAAGCACCCAGATACAAGAGAAGCAAATGAATTAGCCCAT
TTAATGACTTGGATGCAAAAGTTTCATGGGATTGTGGACCGAATAGGGGC
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protein sequence of NO05G01940.1

>NO05G01940.1-protein ID=NO05G01940.1-protein|Name=NO05G01940.1|organism=Nannochloropsis oceanica|type=polypeptide|length=792bp
MRYSLRAIVDQVLQERGGRPLDLKFSFSGPTKQTTAKTRTHHRPSRHQGP
SLAMAADTSWDYREEDSSLPSSSLITSPLPDAKRMKKSLKKKETKAHKEK
DRKVKNKTQTHESKRRMRDEEEEEEEEMVGDEVLVEEESRVTAAALRKQP
NLEQRQQEKKSKPQHYEVMWVPMAGDGKSSSGHDKDKQQQRHQRRQQQHG
GIIDVSPKAPRSASDLQKEQQFLARREKQRQQQQLQQKMKWRKGPAENEE
KKANAEEEGRGEGRLVAAVTVTREKKQKQPTRKESEEDDERVKKGQNIVG
KDGGRKRGEIKSDWKRPEAGAGGVVRQHPKEVKVSAAATTTARPKERKKE
RREERRRRSTTARIASGMSEEKMELEEQLLEYLPSPVYEEEDEKEDDFAQ
ERFQEQQCQQRQQPQQRFDKGKEQVEEKGTKEGCGLQEQMSSLEAQVAAI
ERMLRRDRGRDQREDEDKDEDEDEDEDGERKAVDGSPMLHLRRRHLAFDD
DKEEEEEEEEKEEEDNVINNVKGQPAAYLPALSSASSSDVEEDEEEEEGE
VMESPLSMVGGLEARLASLEIDYLKSNPRARRRMEEDAREACEARQARLR
SQAVFDAKMRTLGGELEEVGEEEEEEEEEEEGEEEEEMEIGEGKSGHGLF
GNNSVKETPRPSEHYTAGLVQGEKLKQKIKMKGSVRGGGGGGVDGYDSIQ
SLLAQLQELQEEFVAPDIFASSTTATGQEGRASEDGGKVKLIASFSSAAS
GEEFEGGMSGATDLSMREEQLDALEARLAGITALIRSELPR*
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Synonyms
Publications