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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr5 | genome | chr5:529782..532681 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO05G01940.1 ID=NO05G01940.1|Name=NO05G01940.1|organism=Nannochloropsis oceanica|type=mRNA|length=2900bp
TGTTTGGTCTCCCTTTTTACTTTCCAACAGGGCCAGTGCCGAGGAGGAGT
GTGGGAGCGGTGTGGGAGCATACCGCGGGCAATCGTCGTCATCCGATTCT
GTCACCGGCCTCGCGTTTTCTGTGTGTTCCTTGGGGTCCTTCGGTCCGCG
CTCCTTCAAAACTTGAGCTATCCCACGCGTTGTTACCCACACCACCTCTC
ACTCTGCCCTAACCTAGACGCGCTAAATCGCCCTGCTTCCTCGCGTTCCC
TCCCAGTTGTCGGTCCCACCATAACTATCACACGCATCGCCAACGCCTCT
CTTTCTTTCATTCCTCCTGCACGCTTTCAGACAGGTGGGAACCATGCGCT
ACAGCCTGCGTGCGATCGTGGACCAGGTCCTGCAGGAGCGTGGGGGGCGG
CCACTTGATCTCAAGTTTTCCTTCTCCGGGCCTACCAAGCAGACCACGGC
GAAAACGAGGACGCACCACCGACCATCTCGTCACCAAGGACCATCCCTCG
CGATGGCGGCCGACACTTCCTGGGATTACCGAGAGGAGGACTCGTCGTTG
CCGTCCTCCTCTTTGATCACGTCTCCACTCCCGGACGCGAAAAGAATGAA
GAAAAGCCTGAAGAAAAAGGAGACGAAGGCCCACAAGGAGAAGGATCGGA
AAGTTAAGAACAAGACGCAGACACACGAAAGCAAACGCCGAATGCGTGAC
GAGGAGGAAGAGGAGGAGGAGGAGATGGTGGGTGACGAGGTGCTGGTGGA
GGAGGAGAGTCGCGTGACCGCAGCAGCGCTAAGGAAGCAACCGAACCTGG
AGCAGCGTCAACAGGAGAAGAAGAGCAAGCCCCAACACTACGAAGTCATG
TGGGTCCCCATGGCGGGCGACGGCAAGTCTTCCTCCGGCCATGACAAGGA
CAAGCAGCAACAACGACATCAACGACGACAACAACAGCACGGGGGGATCA
TTGACGTAAGCCCCAAGGCTCCTCGTTCCGCGTCTGACCTGCAGAAGGAG
CAGCAATTTCTAGCCCGTCGCGAGAAGCAACGGCAGCAGCAGCAGCTGCA
GCAGAAGATGAAATGGCGCAAGGGACCTGCGGAGAATGAAGAAAAGAAGG
CAAATGCGGAGGAGGAGGGGAGGGGAGAGGGAAGGCTGGTGGCGGCTGTA
ACGGTGACCCGCGAGAAGAAGCAGAAGCAGCCAACTCGCAAGGAGAGCGA
GGAGGACGACGAGAGAGTAAAGAAGGGACAAAACATTGTAGGAAAGGACG
GAGGAAGAAAACGAGGAGAGATAAAAAGCGACTGGAAGCGACCAGAAGCT
GGTGCTGGTGGAGTGGTACGGCAGCATCCCAAAGAGGTGAAGGTCTCAGC
AGCGGCCACGACCACTGCACGGCCAAAAGAGCGAAAGAAGGAAAGGAGGG
AAGAAAGGAGAAGAAGGTCGACAACAGCACGCATTGCATCGGGAATGAGT
GAAGAAAAGATGGAGCTGGAGGAGCAGCTGCTGGAGTACCTTCCCTCTCC
AGTGTATGAGGAAGAGGATGAGAAGGAAGACGACTTTGCACAGGAGCGAT
TCCAGGAGCAGCAATGCCAGCAGCGGCAGCAGCCGCAGCAGCGCTTTGAT
AAAGGAAAGGAGCAGGTTGAGGAGAAAGGAACGAAGGAGGGATGTGGTCT
ACAGGAGCAGATGTCGTCGTTGGAAGCCCAGGTGGCGGCGATTGAGCGGA
TGTTGCGGCGTGACCGAGGAAGGGACCAGAGAGAGGATGAAGATAAAGAT
GAGGATGAGGATGAGGATGAGGATGGGGAGAGAAAGGCGGTAGACGGGAG
TCCGATGCTTCACCTTCGAAGACGACATCTTGCTTTTGATGATGACAAAG
AGGAGGAAGAGGAGGAAGAAGAAAAGGAGGAGGAGGATAATGTCATCAAC
AACGTCAAAGGGCAACCTGCGGCTTACCTACCTGCGCTGTCGTCCGCGTC
ATCTTCGGATGTCGAAGAGGATGAAGAAGAGGAGGAGGGGGAGGTTATGG
AGAGCCCCCTCTCGATGGTGGGGGGATTGGAAGCTCGTCTTGCTAGCCTG
GAAATTGACTATCTGAAGAGCAATCCACGGGCACGACGACGAATGGAGGA
GGATGCAAGGGAAGCGTGCGAAGCACGGCAGGCACGCCTTCGCTCCCAGG
CGGTGTTTGACGCCAAGATGCGCACGTTGGGCGGAGAGTTGGAGGAGGTG
GGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGGAGGAGGAGGA
GGAGATGGAAATTGGGGAGGGGAAGAGTGGACATGGTTTATTTGGGAACA
ATTCAGTGAAAGAGACTCCCCGTCCATCAGAACACTACACGGCGGGCTTG
GTACAAGGCGAGAAACTGAAGCAGAAGATTAAGATGAAGGGATCAGTGCG
CGGAGGGGGAGGTGGAGGGGTGGATGGTTATGACAGCATTCAATCGTTGC
TTGCGCAGCTTCAAGAACTTCAAGAAGAATTTGTGGCGCCCGATATTTTT
GCTTCGTCTACGACAGCGACAGGACAAGAAGGAAGGGCGAGCGAGGATGG
CGGGAAGGTCAAGTTAATCGCTTCCTTCTCCTCAGCGGCGTCGGGTGAAG
AATTTGAAGGGGGTATGAGCGGGGCTACCGATTTGAGTATGCGGGAAGAG
CAGTTAGATGCCTTGGAAGCTCGGTTAGCGGGGATTACGGCGCTGATTCG
AAGCGAGCTGCCGCGATGAGTGCATACGACTTGGTCGAAGGGGGAGGGCA
GAAATGAGTGAAAGGAAGCGAAGTGAAAAACCTGTGGGGTGATGACAACT
TGAAAACATAAAAGCACCCAGATACAAGAGAAGCAAATGAATTAGCCCAT
TTAATGACTTGGATGCAAAAGTTTCATGGGATTGTGGACCGAATAGGGGC back to topprotein sequence of NO05G01940.1 >NO05G01940.1-protein ID=NO05G01940.1-protein|Name=NO05G01940.1|organism=Nannochloropsis oceanica|type=polypeptide|length=792bp
MRYSLRAIVDQVLQERGGRPLDLKFSFSGPTKQTTAKTRTHHRPSRHQGP
SLAMAADTSWDYREEDSSLPSSSLITSPLPDAKRMKKSLKKKETKAHKEK
DRKVKNKTQTHESKRRMRDEEEEEEEEMVGDEVLVEEESRVTAAALRKQP
NLEQRQQEKKSKPQHYEVMWVPMAGDGKSSSGHDKDKQQQRHQRRQQQHG
GIIDVSPKAPRSASDLQKEQQFLARREKQRQQQQLQQKMKWRKGPAENEE
KKANAEEEGRGEGRLVAAVTVTREKKQKQPTRKESEEDDERVKKGQNIVG
KDGGRKRGEIKSDWKRPEAGAGGVVRQHPKEVKVSAAATTTARPKERKKE
RREERRRRSTTARIASGMSEEKMELEEQLLEYLPSPVYEEEDEKEDDFAQ
ERFQEQQCQQRQQPQQRFDKGKEQVEEKGTKEGCGLQEQMSSLEAQVAAI
ERMLRRDRGRDQREDEDKDEDEDEDEDGERKAVDGSPMLHLRRRHLAFDD
DKEEEEEEEEKEEEDNVINNVKGQPAAYLPALSSASSSDVEEDEEEEEGE
VMESPLSMVGGLEARLASLEIDYLKSNPRARRRMEEDAREACEARQARLR
SQAVFDAKMRTLGGELEEVGEEEEEEEEEEEGEEEEEMEIGEGKSGHGLF
GNNSVKETPRPSEHYTAGLVQGEKLKQKIKMKGSVRGGGGGGVDGYDSIQ
SLLAQLQELQEEFVAPDIFASSTTATGQEGRASEDGGKVKLIASFSSAAS
GEEFEGGMSGATDLSMREEQLDALEARLAGITALIRSELPR* back to topmRNA from alignment at chr5:529782..532681- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO05G01940.1 ID=NO05G01940.1|Name=NO05G01940.1|organism=Nannochloropsis oceanica|type=mRNA|length=2900bp|location=Sequence derived from alignment at chr5:529782..532681- (Nannochloropsis oceanica)
TGTTTGGTCTCCCTTTTTACTTTCCAACAGGGCCAGTGCCGAGGAGGAGT
GTGGGAGCGGTGTGGGAGCATACCGCGGGCAATCGTCGTCATCCGATTCT
GTCACCGGCCTCGCGTTTTCTGTGTGTTCCTTGGGGTCCTTCGGTCCGCG
CTCCTTCAAAACTTGAGCTATCCCACGCGTTGTTACCCACACCACCTCTC
ACTCTGCCCTAACCTAGACGCGCTAAATCGCCCTGCTTCCTCGCGTTCCC
TCCCAGTTGTCGGTCCCACCATAACTATCACACGCATCGCCAACGCCTCT
CTTTCTTTCATTCCTCCTGCACGCTTTCAGACAGGTGGGAACCATGCGCT
ACAGCCTGCGTGCGATCGTGGACCAGGTCCTGCAGGAGCGTGGGGGGCGG
CCACTTGATCTCAAGTTTTCCTTCTCCGGGCCTACCAAGCAGACCACGGC
GAAAACGAGGACGCACCACCGACCATCTCGTCACCAAGGACCATCCCTCG
CGATGGCGGCCGACACTTCCTGGGATTACCGAGAGGAGGACTCGTCGTTG
CCGTCCTCCTCTTTGATCACGTCTCCACTCCCGGACGCGAAAAGAATGAA
GAAAAGCCTGAAGAAAAAGGAGACGAAGGCCCACAAGGAGAAGGATCGGA
AAGTTAAGAACAAGACGCAGACACACGAAAGCAAACGCCGAATGCGTGAC
GAGGAGGAAGAGGAGGAGGAGGAGATGGTGGGTGACGAGGTGCTGGTGGA
GGAGGAGAGTCGCGTGACCGCAGCAGCGCTAAGGAAGCAACCGAACCTGG
AGCAGCGTCAACAGGAGAAGAAGAGCAAGCCCCAACACTACGAAGTCATG
TGGGTCCCCATGGCGGGCGACGGCAAGTCTTCCTCCGGCCATGACAAGGA
CAAGCAGCAACAACGACATCAACGACGACAACAACAGCACGGGGGGATCA
TTGACGTAAGCCCCAAGGCTCCTCGTTCCGCGTCTGACCTGCAGAAGGAG
CAGCAATTTCTAGCCCGTCGCGAGAAGCAACGGCAGCAGCAGCAGCTGCA
GCAGAAGATGAAATGGCGCAAGGGACCTGCGGAGAATGAAGAAAAGAAGG
CAAATGCGGAGGAGGAGGGGAGGGGAGAGGGAAGGCTGGTGGCGGCTGTA
ACGGTGACCCGCGAGAAGAAGCAGAAGCAGCCAACTCGCAAGGAGAGCGA
GGAGGACGACGAGAGAGTAAAGAAGGGACAAAACATTGTAGGAAAGGACG
GAGGAAGAAAACGAGGAGAGATAAAAAGCGACTGGAAGCGACCAGAAGCT
GGTGCTGGTGGAGTGGTACGGCAGCATCCCAAAGAGGTGAAGGTCTCAGC
AGCGGCCACGACCACTGCACGGCCAAAAGAGCGAAAGAAGGAAAGGAGGG
AAGAAAGGAGAAGAAGGTCGACAACAGCACGCATTGCATCGGGAATGAGT
GAAGAAAAGATGGAGCTGGAGGAGCAGCTGCTGGAGTACCTTCCCTCTCC
AGTGTATGAGGAAGAGGATGAGAAGGAAGACGACTTTGCACAGGAGCGAT
TCCAGGAGCAGCAATGCCAGCAGCGGCAGCAGCCGCAGCAGCGCTTTGAT
AAAGGAAAGGAGCAGGTTGAGGAGAAAGGAACGAAGGAGGGATGTGGTCT
ACAGGAGCAGATGTCGTCGTTGGAAGCCCAGGTGGCGGCGATTGAGCGGA
TGTTGCGGCGTGACCGAGGAAGGGACCAGAGAGAGGATGAAGATAAAGAT
GAGGATGAGGATGAGGATGAGGATGGGGAGAGAAAGGCGGTAGACGGGAG
TCCGATGCTTCACCTTCGAAGACGACATCTTGCTTTTGATGATGACAAAG
AGGAGGAAGAGGAGGAAGAAGAAAAGGAGGAGGAGGATAATGTCATCAAC
AACGTCAAAGGGCAACCTGCGGCTTACCTACCTGCGCTGTCGTCCGCGTC
ATCTTCGGATGTCGAAGAGGATGAAGAAGAGGAGGAGGGGGAGGTTATGG
AGAGCCCCCTCTCGATGGTGGGGGGATTGGAAGCTCGTCTTGCTAGCCTG
GAAATTGACTATCTGAAGAGCAATCCACGGGCACGACGACGAATGGAGGA
GGATGCAAGGGAAGCGTGCGAAGCACGGCAGGCACGCCTTCGCTCCCAGG
CGGTGTTTGACGCCAAGATGCGCACGTTGGGCGGAGAGTTGGAGGAGGTG
GGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGGAGGAGGAGGA
GGAGATGGAAATTGGGGAGGGGAAGAGTGGACATGGTTTATTTGGGAACA
ATTCAGTGAAAGAGACTCCCCGTCCATCAGAACACTACACGGCGGGCTTG
GTACAAGGCGAGAAACTGAAGCAGAAGATTAAGATGAAGGGATCAGTGCG
CGGAGGGGGAGGTGGAGGGGTGGATGGTTATGACAGCATTCAATCGTTGC
TTGCGCAGCTTCAAGAACTTCAAGAAGAATTTGTGGCGCCCGATATTTTT
GCTTCGTCTACGACAGCGACAGGACAAGAAGGAAGGGCGAGCGAGGATGG
CGGGAAGGTCAAGTTAATCGCTTCCTTCTCCTCAGCGGCGTCGGGTGAAG
AATTTGAAGGGGGTATGAGCGGGGCTACCGATTTGAGTATGCGGGAAGAG
CAGTTAGATGCCTTGGAAGCTCGGTTAGCGGGGATTACGGCGCTGATTCG
AAGCGAGCTGCCGCGATGAGTGCATACGACTTGGTCGAAGGGGGAGGGCA
GAAATGAGTGAAAGGAAGCGAAGTGAAAAACCTGTGGGGTGATGACAACT
TGAAAACATAAAAGCACCCAGATACAAGAGAAGCAAATGAATTAGCCCAT
TTAATGACTTGGATGCAAAAGTTTCATGGGATTGTGGACCGAATAGGGGC
back to topCoding sequence (CDS) from alignment at chr5:529782..532681- >NO05G01940.1 ID=NO05G01940.1|Name=NO05G01940.1|organism=Nannochloropsis oceanica|type=CDS|length=2376bp|location=Sequence derived from alignment at chr5:529782..532681- (Nannochloropsis oceanica)
ATGCGCTACAGCCTGCGTGCGATCGTGGACCAGGTCCTGCAGGAGCGTGG
GGGGCGGCCACTTGATCTCAAGTTTTCCTTCTCCGGGCCTACCAAGCAGA
CCACGGCGAAAACGAGGACGCACCACCGACCATCTCGTCACCAAGGACCA
TCCCTCGCGATGGCGGCCGACACTTCCTGGGATTACCGAGAGGAGGACTC
GTCGTTGCCGTCCTCCTCTTTGATCACGTCTCCACTCCCGGACGCGAAAA
GAATGAAGAAAAGCCTGAAGAAAAAGGAGACGAAGGCCCACAAGGAGAAG
GATCGGAAAGTTAAGAACAAGACGCAGACACACGAAAGCAAACGCCGAAT
GCGTGACGAGGAGGAAGAGGAGGAGGAGGAGATGGTGGGTGACGAGGTGC
TGGTGGAGGAGGAGAGTCGCGTGACCGCAGCAGCGCTAAGGAAGCAACCG
AACCTGGAGCAGCGTCAACAGGAGAAGAAGAGCAAGCCCCAACACTACGA
AGTCATGTGGGTCCCCATGGCGGGCGACGGCAAGTCTTCCTCCGGCCATG
ACAAGGACAAGCAGCAACAACGACATCAACGACGACAACAACAGCACGGG
GGGATCATTGACGTAAGCCCCAAGGCTCCTCGTTCCGCGTCTGACCTGCA
GAAGGAGCAGCAATTTCTAGCCCGTCGCGAGAAGCAACGGCAGCAGCAGC
AGCTGCAGCAGAAGATGAAATGGCGCAAGGGACCTGCGGAGAATGAAGAA
AAGAAGGCAAATGCGGAGGAGGAGGGGAGGGGAGAGGGAAGGCTGGTGGC
GGCTGTAACGGTGACCCGCGAGAAGAAGCAGAAGCAGCCAACTCGCAAGG
AGAGCGAGGAGGACGACGAGAGAGTAAAGAAGGGACAAAACATTGTAGGA
AAGGACGGAGGAAGAAAACGAGGAGAGATAAAAAGCGACTGGAAGCGACC
AGAAGCTGGTGCTGGTGGAGTGGTACGGCAGCATCCCAAAGAGGTGAAGG
TCTCAGCAGCGGCCACGACCACTGCACGGCCAAAAGAGCGAAAGAAGGAA
AGGAGGGAAGAAAGGAGAAGAAGGTCGACAACAGCACGCATTGCATCGGG
AATGAGTGAAGAAAAGATGGAGCTGGAGGAGCAGCTGCTGGAGTACCTTC
CCTCTCCAGTGTATGAGGAAGAGGATGAGAAGGAAGACGACTTTGCACAG
GAGCGATTCCAGGAGCAGCAATGCCAGCAGCGGCAGCAGCCGCAGCAGCG
CTTTGATAAAGGAAAGGAGCAGGTTGAGGAGAAAGGAACGAAGGAGGGAT
GTGGTCTACAGGAGCAGATGTCGTCGTTGGAAGCCCAGGTGGCGGCGATT
GAGCGGATGTTGCGGCGTGACCGAGGAAGGGACCAGAGAGAGGATGAAGA
TAAAGATGAGGATGAGGATGAGGATGAGGATGGGGAGAGAAAGGCGGTAG
ACGGGAGTCCGATGCTTCACCTTCGAAGACGACATCTTGCTTTTGATGAT
GACAAAGAGGAGGAAGAGGAGGAAGAAGAAAAGGAGGAGGAGGATAATGT
CATCAACAACGTCAAAGGGCAACCTGCGGCTTACCTACCTGCGCTGTCGT
CCGCGTCATCTTCGGATGTCGAAGAGGATGAAGAAGAGGAGGAGGGGGAG
GTTATGGAGAGCCCCCTCTCGATGGTGGGGGGATTGGAAGCTCGTCTTGC
TAGCCTGGAAATTGACTATCTGAAGAGCAATCCACGGGCACGACGACGAA
TGGAGGAGGATGCAAGGGAAGCGTGCGAAGCACGGCAGGCACGCCTTCGC
TCCCAGGCGGTGTTTGACGCCAAGATGCGCACGTTGGGCGGAGAGTTGGA
GGAGGTGGGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGGAGG
AGGAGGAGGAGATGGAAATTGGGGAGGGGAAGAGTGGACATGGTTTATTT
GGGAACAATTCAGTGAAAGAGACTCCCCGTCCATCAGAACACTACACGGC
GGGCTTGGTACAAGGCGAGAAACTGAAGCAGAAGATTAAGATGAAGGGAT
CAGTGCGCGGAGGGGGAGGTGGAGGGGTGGATGGTTATGACAGCATTCAA
TCGTTGCTTGCGCAGCTTCAAGAACTTCAAGAAGAATTTGTGGCGCCCGA
TATTTTTGCTTCGTCTACGACAGCGACAGGACAAGAAGGAAGGGCGAGCG
AGGATGGCGGGAAGGTCAAGTTAATCGCTTCCTTCTCCTCAGCGGCGTCG
GGTGAAGAATTTGAAGGGGGTATGAGCGGGGCTACCGATTTGAGTATGCG
GGAAGAGCAGTTAGATGCCTTGGAAGCTCGGTTAGCGGGGATTACGGCGC
TGATTCGAAGCGAGCTGCCGCGATGA back to top
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