NO05G01870, NO05G01870 (gene) Nannochloropsis oceanica

Overview
NameNO05G01870
Unique NameNO05G01870
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1316
Alignment locationchr5:512792..514107 -

Link to JBrowse

Properties
Property NameValue
DescriptionIntraflagellar transport protein 57 homolog
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:512792..514107 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR019530Intra-flagellar_transport_57
Homology
[Close]
BLAST of NO05G01870 vs. NCBI_GenBank
Match: EWM28242.1 (hypothetical protein Naga_100004g112 [Nannochloropsis gaditana])

HSP 1 Score: 158.7 bits (400), Expect = 3.700e-35
Identity = 120/319 (37.62%), Postives = 168/319 (52.66%), Query Frame = 0 
Query:   43 MESIVEKLKVLDLKGAGRPLSCPPPRLDRLSFVVKQPRQHALFLTVASWLCNRLKG-ESDPTHC--HTTVEALVADLSNLQLCGMSTGEEMAALKLGYGKDVCRLLDILCNAALAKIGFVWQAPVYVPSEETLNKAESEEAAAAPEKNGSTSMLSFTTLQPEAKLAAKLTEAKESKSCTSPDVAEGKSWDPKLPLKHDEESESKEQRCRERVGQVKVQINEAENAHQIKQGRVDTLKIEFGRLQDRCDRLQREEEEALRWEHPSGEEGSTWQTGGGSGGKGGERMAYDSPMVMMRRGLEKVNEEIKAFDVRIGVMQHIL 359
            MESI EKLK+LD +     +S  PP +DRLSFVV+QP Q  LFL V  WL  RL G +SD ++     +VE LV+D+S  ++      E M A +LG GK VCR+LD LC+  LAK+GF WQ PV+    E   KA+S+E  A       +  +      P A         KE K       AE K+ D      HD +SESKEQR + RV Q+K QI + +N  Q++  R+  LK +  +L +RC RLQ++E EAL  ++P G   S             + +     +V ++    K+ EEI A   + G+++H L
Sbjct:    1 MESIAEKLKILDSRIGTSSMS--PPSVDRLSFVVQQPTQRELFLKVGFWLIERLDGTQSDFSYAQRRKSVEDLVSDISERKILQQCGEEAMRAFELGRGKAVCRVLDSLCDLVLAKVGFRWQRPVHTICREIPLKADSKETEAVRRSIKESFPMLLHLQDPSADDQQNTNSVKECK-------AERKNSDHTSNRLHD-QSESKEQRYKARVLQLKNQIIDQQNVCQLQSRRIQVLKNDLRKLNERCVRLQQKEREALS-DNPLGRMSSP------EAIADAKDVTCTPLVVRLKIADMKMKEEIPALKFKTGIIRHSL 302
[Close]
BLAST of NO05G01870 vs. NCBI_GenBank
Match: XP_020662035.1 (intraflagellar transport protein 57 homolog isoform X1 [Pogona vitticeps])

HSP 1 Score: 81.6 bits (200), Expect = 5.800e-12
Identity = 91/371 (24.53%), Postives = 160/371 (43.13%), Query Frame = 0 
Query:   39 LFLMMESIVEKLKVLDL--KGAGRPLSCPPPRLDRLSFVVKQPRQHALFLTVASWLCNRLKGESDPTHCHTTVEALVAD-LSNLQLCGMSTGEEMAALKLGYGKDVCRLLDILCNAALAKIGFVWQAPVYVPSEE-------------TLNKAESEEAAAAPEKNGSTSMLSFTTLQPEAKLAAKLTEAKESKSCTSPDVAEGKSWDPKL-----PLKHDEESESKEQRCRERVGQVKVQINEAENAHQIKQGRVDTLKIEFGRLQDRC---DRLQREEEEALRWEHPS-----GEEGSTWQTGGGS---------------------GGKGGERMAYDSPMVMMRRGLEKVNEEIKAFDVRIGVMQHILL 360
            +F++ME ++EKLK+L+   + A R  +  PP     +  +    Q  +F T+A+WL N+     +    +    A ++  L+ L+  G S     + LK GYG+  C +LD L   AL    F W+ P+Y P+EE             TLNK   EE  A  E +   + +    L+ +    + +TE+K+ +   S    +   W+ ++      LK    +++K+ R    V Q+    +  E+A +  +G +D L  E  R  ++    ++    + E L  E+ S      E    +Q G G                          G  M   +P+V +++ L ++ +E    D+RIGV++H LL
Sbjct:   27 MFVLMEDLLEKLKLLNYEEEAALRSHNMRPPSRHYFALPINPGEQFYMFCTLAAWLINKAGHPFEQPQEYDDPNATISSILAELRSFGRSVDFPPSKLKAGYGEQACYVLDCLAEEALKYTSFAWKRPIY-PTEELEEEAITEDDAELTLNKV--EEILAEEETDNEDNYIDLNVLKAQT-YKSDMTESKQEEILES--TVDAAEWNLEVERVLPQLKVTIRTDNKDWRI--HVDQMHQHQDGIESALKDTRGYLDKLHNEISRTLEKVSSREKYVNNQLEHLVQEYRSAQALLSEAKEKYQQGSGGVTERTRILSEITXXXXXXXXXXXXXGNSMTDGAPLVKIKQALTRLKQETIQMDIRIGVVEHTLL 389
[Close]
BLAST of NO05G01870 vs. NCBI_GenBank
Match: XP_020662036.1 (intraflagellar transport protein 57 homolog isoform X2 [Pogona vitticeps])

HSP 1 Score: 75.1 bits (183), Expect = 5.400e-10
Identity = 81/342 (23.68%), Postives = 143/342 (41.81%), Query Frame = 0 
Query:   39 LFLMMESIVEKLKVLDL--KGAGRPLSCPPPRLDRLSFVVKQPRQHALFLTVASWLCNRLKGESDPTHCHTTVEALVAD-LSNLQLCGMSTGEEMAALKLGYGKDVCRLLDILCNAALAKIGFVWQAPVYVPSEE-------------TLNKAESEEAAAAPEKNGSTSMLSFTTLQPEAKLAAKLTEAKESKSCTSPDVAEGKSWDPKL-----PLKHDEESESKEQRCRERVGQVKVQINEAENAHQIKQGRVDTLKIEFGRLQDRCDRLQREEEEALRWEHPSGEEGSTWQTGGGSGGKGGERMAYDSPMVMMRRGLEKVNEEIKAFDVRIGVMQHILL 360
            +F++ME ++EKLK+L+   + A R  +  PP     +  +    Q  +F T+A+WL N+     +    +    A ++  L+ L+  G S     + LK GYG+  C +LD L   AL    F W+ P+Y P+EE             TLNK   EE  A  E +   + +    L+ +    + +TE+K+ +   S    +   W+ ++      LK    +++K+ R               +  HQ + G    LK    +     ++ Q+             E               G  M   +P+V +++ L ++ +E    D+RIGV++H LL
Sbjct:   27 MFVLMEDLLEKLKLLNYEEEAALRSHNMRPPSRHYFALPINPGEQFYMFCTLAAWLINKAGHPFEQPQEYDDPNATISSILAELRSFGRSVDFPPSKLKAGYGEQACYVLDCLAEEALKYTSFAWKRPIY-PTEELEEEAITEDDAELTLNKV--EEILAEEETDNEDNYIDLNVLKAQT-YKSDMTESKQEEILES--TVDAAEWNLEVERVLPQLKVTIRTDNKDWRI------------HVDQMHQHQDGIESALKDTRAK-----EKYQQGSGGVTERTRILSEITEXXXXXXXXXXXXGNSMTDGAPLVKIKQALTRLKQETIQMDIRIGVVEHTLL 345
[Close]
BLAST of NO05G01870 vs. NCBI_GenBank
Match: XP_003763614.1 (intraflagellar transport protein 57 homolog isoform X1 [Sarcophilus harrisii])

HSP 1 Score: 75.1 bits (183), Expect = 5.400e-10
Identity = 95/372 (25.54%), Postives = 161/372 (43.28%), Query Frame = 0 
Query:   39 LFLMMESIVEKLKVLDL-KGAGRPLSCPPPRLDRLSFVVKQPRQHALFLTVASWLCNRLKGESDPTHCHTTVEALVAD-LSNLQLCGMSTGEEMAALKLGYGKDVCRLLDILCNAALAKIGFVWQAPVY---------VPSEE---TLNKAES---EEAAAAPEKNGSTSMLSFTTLQPEAKLAAKLTEAKESKSCTSPDVAEGKSWDPKL-----PLKHDEESESKEQRCRERVGQVKVQINEAENAHQIKQGRVDTLKIEFGRLQDRC--------DRLQREEEEALRWEHPSGEEGSTWQTGGG---------------------SGGKGGERMAYDSPMVMMRRGLEKVNEEIKAFDVRIGVMQHILL 360
            +F++ME +VEKLK+L   +   R  +  P      +       Q  +F T+A+WL N+     +    +    A +++ LS L+  G S     + LK G+G+ VC +LD L   AL  +GF W+ PVY         VP ++   T+NK E    EE     E     ++L   T + +   +AK  +  ES    + D AE   W+ ++      LK    +++K+ R    V Q+    +E E+A +  +G +D L  E  R  ++         ++L+   +E    +    E    +Q G G                        + G  M   +P+V +++ L K+ +E    D+RIGV++H LL
Sbjct:   40 MFVVMEDLVEKLKLLRYEEEILRRNNLKPLSRHYFALPTNPGEQFYMFCTLAAWLINKAGCPFEQPQEYDDPNATISNILSELRSFGRSADFPPSKLKSGHGEHVCYVLDCLAEEALKYVGFSWKRPVYPVEELEEETVPEDDAELTVNKVEEEIVEEETDNEENFIDLNVLKAQTYRLDMNESAKQEDILES----TTDAAE---WNLEVERVLPQLKVTIRTDNKDWRI--HVDQMHQHKSEIESALKETKGFLDKLHNEISRTLEKISSREKYINNQLEHLVQEYRAAQAQLSEARERYQQGNGGVTERTRILSEITEELEKVKLEMEEKGSSMTDGAPLVKIKQSLTKLKQETVQMDIRIGVVEHTLL 402
[Close]
BLAST of NO05G01870 vs. NCBI_GenBank
Match: XP_010565613.1 (PREDICTED: intraflagellar transport protein 57 homolog isoform X1 [Haliaeetus leucocephalus])

HSP 1 Score: 73.6 bits (179), Expect = 1.600e-9
Identity = 94/373 (25.20%), Postives = 162/373 (43.43%), Query Frame = 0 
Query:   39 LFLMMESIVEKLKVLDL-KGAGRPLSCPPPRLDRLSFVVKQPRQHALFLTVASWLCNRLKGESDPTHCHTTVEALVAD-LSNLQLCGMSTGEEMAALKLGYGKDVCRLLDILCNAALAKIGFVWQAPVYVPSEE-------------TLNKAE---SEEAAAAPEKNGSTSMLSFTTLQPEAKLAAKLTEAKESKSCTSPDVAEGKSWDPKL-----PLKHDEESESKEQRCRERVGQVKVQINEAENAHQIKQGRVDTLKIEFGRLQDRCDRLQR---EEEEALRWEHPS-----GEEGSTWQTGGGSGG---------------------KGGERMAYDSPMVMMRRGLEKVNEEIKAFDVRIGVMQHILL 360
            +F++ME +++KLK+L   + A R  +  P      +       Q  +F T+A+WL  +     +    +    A++++ LS L+  G       + LK GYG+ VC +LD L   AL   GF W+ P Y P+EE             TLNK E   +EE + + E     ++L   T + +    AK  E  +S    + D AE   W+ ++      LK    +++K+ R    V Q+    +  E++ +  +G +D L  E  R  ++ +  ++    + E L  E+ S      E    +Q G G                        + G  M   +P+V +++ L K+ +E    D++IGVM+H LL
Sbjct:   13 MFVLMEDLLDKLKLLSYEEEALRRHNMRPLSRHYFALPTNPGEQFFMFCTLAAWLITKAGHPFEQPQEYDDPNAIISNVLSELRSFGRPVDFPPSKLKAGYGEQVCYVLDCLAEEALKYTGFSWKRPAY-PTEELEEEEITEDDAELTLNKLEEDVAEEESDSEEDFIDLNVLKAQTYRSDMNDTAKQDEILQS----TTDAAE---WNLEVERVLPQLKVTVRTDNKDWRI--HVDQMHQHKDGIESSLKETRGYLDKLHNEISRTLEKINSREKYINNQLEHLVQEYRSAQALLSEAKEKYQEGSGGVNERIRVLSEITEVLERVKQETEEKGSSMTDGAPLVKIKQALTKLKQETIQMDIQIGVMEHTLL 375
[Close]
BLAST of NO05G01870 vs. NCBI_GenBank
Match: XP_010565614.1 (PREDICTED: intraflagellar transport protein 57 homolog isoform X2 [Haliaeetus leucocephalus])

HSP 1 Score: 73.6 bits (179), Expect = 1.600e-9
Identity = 94/373 (25.20%), Postives = 162/373 (43.43%), Query Frame = 0 
Query:   39 LFLMMESIVEKLKVLDL-KGAGRPLSCPPPRLDRLSFVVKQPRQHALFLTVASWLCNRLKGESDPTHCHTTVEALVAD-LSNLQLCGMSTGEEMAALKLGYGKDVCRLLDILCNAALAKIGFVWQAPVYVPSEE-------------TLNKAE---SEEAAAAPEKNGSTSMLSFTTLQPEAKLAAKLTEAKESKSCTSPDVAEGKSWDPKL-----PLKHDEESESKEQRCRERVGQVKVQINEAENAHQIKQGRVDTLKIEFGRLQDRCDRLQR---EEEEALRWEHPS-----GEEGSTWQTGGGSGG---------------------KGGERMAYDSPMVMMRRGLEKVNEEIKAFDVRIGVMQHILL 360
            +F++ME +++KLK+L   + A R  +  P      +       Q  +F T+A+WL  +     +    +    A++++ LS L+  G       + LK GYG+ VC +LD L   AL   GF W+ P Y P+EE             TLNK E   +EE + + E     ++L   T + +    AK  E  +S    + D AE   W+ ++      LK    +++K+ R    V Q+    +  E++ +  +G +D L  E  R  ++ +  ++    + E L  E+ S      E    +Q G G                        + G  M   +P+V +++ L K+ +E    D++IGVM+H LL
Sbjct:   13 MFVLMEDLLDKLKLLSYEEEALRRHNMRPLSRHYFALPTNPGEQFFMFCTLAAWLITKAGHPFEQPQEYDDPNAIISNVLSELRSFGRPVDFPPSKLKAGYGEQVCYVLDCLAEEALKYTGFSWKRPAY-PTEELEEEEITEDDAELTLNKLEEDVAEEESDSEEDFIDLNVLKAQTYRSDMNDTAKQDEILQS----TTDAAE---WNLEVERVLPQLKVTVRTDNKDWRI--HVDQMHQHKDGIESSLKETRGYLDKLHNEISRTLEKINSREKYINNQLEHLVQEYRSAQALLSEAKEKYQEGSGGVNERIRVLSEITEVLERVKQETEEKGSSMTDGAPLVKIKQALTKLKQETIQMDIQIGVMEHTLL 375
[Close]
BLAST of NO05G01870 vs. NCBI_GenBank
Match: XP_010565615.1 (PREDICTED: intraflagellar transport protein 57 homolog isoform X3 [Haliaeetus leucocephalus])

HSP 1 Score: 73.6 bits (179), Expect = 1.600e-9
Identity = 94/373 (25.20%), Postives = 162/373 (43.43%), Query Frame = 0 
Query:   39 LFLMMESIVEKLKVLDL-KGAGRPLSCPPPRLDRLSFVVKQPRQHALFLTVASWLCNRLKGESDPTHCHTTVEALVAD-LSNLQLCGMSTGEEMAALKLGYGKDVCRLLDILCNAALAKIGFVWQAPVYVPSEE-------------TLNKAE---SEEAAAAPEKNGSTSMLSFTTLQPEAKLAAKLTEAKESKSCTSPDVAEGKSWDPKL-----PLKHDEESESKEQRCRERVGQVKVQINEAENAHQIKQGRVDTLKIEFGRLQDRCDRLQR---EEEEALRWEHPS-----GEEGSTWQTGGGSGG---------------------KGGERMAYDSPMVMMRRGLEKVNEEIKAFDVRIGVMQHILL 360
            +F++ME +++KLK+L   + A R  +  P      +       Q  +F T+A+WL  +     +    +    A++++ LS L+  G       + LK GYG+ VC +LD L   AL   GF W+ P Y P+EE             TLNK E   +EE + + E     ++L   T + +    AK  E  +S    + D AE   W+ ++      LK    +++K+ R    V Q+    +  E++ +  +G +D L  E  R  ++ +  ++    + E L  E+ S      E    +Q G G                        + G  M   +P+V +++ L K+ +E    D++IGVM+H LL
Sbjct:   13 MFVLMEDLLDKLKLLSYEEEALRRHNMRPLSRHYFALPTNPGEQFFMFCTLAAWLITKAGHPFEQPQEYDDPNAIISNVLSELRSFGRPVDFPPSKLKAGYGEQVCYVLDCLAEEALKYTGFSWKRPAY-PTEELEEEEITEDDAELTLNKLEEDVAEEESDSEEDFIDLNVLKAQTYRSDMNDTAKQDEILQS----TTDAAE---WNLEVERVLPQLKVTVRTDNKDWRI--HVDQMHQHKDGIESSLKETRGYLDKLHNEISRTLEKINSREKYINNQLEHLVQEYRSAQALLSEAKEKYQEGSGGVNERIRVLSEITEVLERVKQETEEKGSSMTDGAPLVKIKQALTKLKQETIQMDIQIGVMEHTLL 375
[Close]
BLAST of NO05G01870 vs. NCBI_GenBank
Match: XP_011582551.1 (PREDICTED: intraflagellar transport protein 57 homolog isoform X1 [Aquila chrysaetos canadensis])

HSP 1 Score: 73.2 bits (178), Expect = 2.100e-9
Identity = 89/370 (24.05%), Postives = 157/370 (42.43%), Query Frame = 0 
Query:   39 LFLMMESIVEKLKVLDL-KGAGRPLSCPPPRLDRLSFVVKQPRQHALFLTVASWLCNRLKGESDPTHCHTTVEALVAD-LSNLQLCGMSTGEEMAALKLGYGKDVCRLLDILCNAALAKIGFVWQAPVYVPSEE-------------TLNKAESEEAAAAPEKNGSTSMLSFTTLQPEAKLAAKLTEAKESKSCTSPDVAEGKSWDPKL-----PLKHDEESESKEQRCRERVGQVKVQINEAENAHQIKQGRVDTLKIEFGRLQDRCDRLQR---EEEEALRWEHPS-----GEEGSTWQTGGG---------------------SGGKGGERMAYDSPMVMMRRGLEKVNEEIKAFDVRIGVMQHILL 360
            +F++ME +++KLK+L   + A R  +  P      +       Q  +F T+A+WL  +     +    +    A++++ LS L+  G       + LK GYG+ VC +LD L   AL   GF W+ P Y P+EE             TLNK   EE  A  E +     +  + L+ +   +     AK+ +   S    +   W+ ++      LK    +++K+ R    V Q+    +  E++ +  +G +D L  E  R  ++ +  ++    + E L  E+ S      E    +Q G G                        + G  M   +P+V +++ L K+ +E    D++IGVM+H LL
Sbjct:   37 MFVLMEDLLDKLKLLSYEEEALRRHNMRPLSRHYFALPTNPGEQFFMFCTLAAWLITKAGHPFEQPQEYDDPNAIISNVLSELRSFGRPVDFPPSKLKAGYGEQVCYVLDCLAEEALKYTGFSWKRPAY-PTEELEEEEITEDDAELTLNKL--EEDVAEEESDNEEDFIDLSVLKAQTYRSDMNDTAKQEEILQS--TTDAAEWNLEVERVLPQLKVTVRTDNKDWRI--HVDQMHQHKDGIESSLKETRGYLDKLHNEISRTLEKINSREKYINNQLEHLVQEYRSAQALLSEAKEKYQEGSGGVTERIRVLSEITEVLERVKQETEEKGSSMTDGAPLVKIKQALTKLKQETIQMDIQIGVMEHTLL 399
[Close]
BLAST of NO05G01870 vs. NCBI_GenBank
Match: XP_011582559.1 (PREDICTED: intraflagellar transport protein 57 homolog isoform X2 [Aquila chrysaetos canadensis])

HSP 1 Score: 73.2 bits (178), Expect = 2.100e-9
Identity = 89/370 (24.05%), Postives = 157/370 (42.43%), Query Frame = 0 
Query:   39 LFLMMESIVEKLKVLDL-KGAGRPLSCPPPRLDRLSFVVKQPRQHALFLTVASWLCNRLKGESDPTHCHTTVEALVAD-LSNLQLCGMSTGEEMAALKLGYGKDVCRLLDILCNAALAKIGFVWQAPVYVPSEE-------------TLNKAESEEAAAAPEKNGSTSMLSFTTLQPEAKLAAKLTEAKESKSCTSPDVAEGKSWDPKL-----PLKHDEESESKEQRCRERVGQVKVQINEAENAHQIKQGRVDTLKIEFGRLQDRCDRLQR---EEEEALRWEHPS-----GEEGSTWQTGGG---------------------SGGKGGERMAYDSPMVMMRRGLEKVNEEIKAFDVRIGVMQHILL 360
            +F++ME +++KLK+L   + A R  +  P      +       Q  +F T+A+WL  +     +    +    A++++ LS L+  G       + LK GYG+ VC +LD L   AL   GF W+ P Y P+EE             TLNK   EE  A  E +     +  + L+ +   +     AK+ +   S    +   W+ ++      LK    +++K+ R    V Q+    +  E++ +  +G +D L  E  R  ++ +  ++    + E L  E+ S      E    +Q G G                        + G  M   +P+V +++ L K+ +E    D++IGVM+H LL
Sbjct:   37 MFVLMEDLLDKLKLLSYEEEALRRHNMRPLSRHYFALPTNPGEQFFMFCTLAAWLITKAGHPFEQPQEYDDPNAIISNVLSELRSFGRPVDFPPSKLKAGYGEQVCYVLDCLAEEALKYTGFSWKRPAY-PTEELEEEEITEDDAELTLNKL--EEDVAEEESDNEEDFIDLSVLKAQTYRSDMNDTAKQEEILQS--TTDAAEWNLEVERVLPQLKVTVRTDNKDWRI--HVDQMHQHKDGIESSLKETRGYLDKLHNEISRTLEKINSREKYINNQLEHLVQEYRSAQALLSEAKEKYQEGSGGVTERIRVLSEITEVLERVKQETEEKGSSMTDGAPLVKIKQALTKLKQETIQMDIQIGVMEHTLL 399
[Close]
BLAST of NO05G01870 vs. NCBI_GenBank
Match: XP_011582565.1 (PREDICTED: intraflagellar transport protein 57 homolog isoform X3 [Aquila chrysaetos canadensis])

HSP 1 Score: 73.2 bits (178), Expect = 2.100e-9
Identity = 89/370 (24.05%), Postives = 157/370 (42.43%), Query Frame = 0 
Query:   39 LFLMMESIVEKLKVLDL-KGAGRPLSCPPPRLDRLSFVVKQPRQHALFLTVASWLCNRLKGESDPTHCHTTVEALVAD-LSNLQLCGMSTGEEMAALKLGYGKDVCRLLDILCNAALAKIGFVWQAPVYVPSEE-------------TLNKAESEEAAAAPEKNGSTSMLSFTTLQPEAKLAAKLTEAKESKSCTSPDVAEGKSWDPKL-----PLKHDEESESKEQRCRERVGQVKVQINEAENAHQIKQGRVDTLKIEFGRLQDRCDRLQR---EEEEALRWEHPS-----GEEGSTWQTGGG---------------------SGGKGGERMAYDSPMVMMRRGLEKVNEEIKAFDVRIGVMQHILL 360
            +F++ME +++KLK+L   + A R  +  P      +       Q  +F T+A+WL  +     +    +    A++++ LS L+  G       + LK GYG+ VC +LD L   AL   GF W+ P Y P+EE             TLNK   EE  A  E +     +  + L+ +   +     AK+ +   S    +   W+ ++      LK    +++K+ R    V Q+    +  E++ +  +G +D L  E  R  ++ +  ++    + E L  E+ S      E    +Q G G                        + G  M   +P+V +++ L K+ +E    D++IGVM+H LL
Sbjct:   37 MFVLMEDLLDKLKLLSYEEEALRRHNMRPLSRHYFALPTNPGEQFFMFCTLAAWLITKAGHPFEQPQEYDDPNAIISNVLSELRSFGRPVDFPPSKLKAGYGEQVCYVLDCLAEEALKYTGFSWKRPAY-PTEELEEEEITEDDAELTLNKL--EEDVAEEESDNEEDFIDLSVLKAQTYRSDMNDTAKQEEILQS--TTDAAEWNLEVERVLPQLKVTVRTDNKDWRI--HVDQMHQHKDGIESSLKETRGYLDKLHNEISRTLEKINSREKYINNQLEHLVQEYRSAQALLSEAKEKYQEGSGGVTERIRVLSEITEVLERVKQETEEKGSSMTDGAPLVKIKQALTKLKQETIQMDIQIGVMEHTLL 399
The following BLAST results are available for this feature:
BLAST of NO05G01870 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28242.13.700e-3537.62hypothetical protein Naga_100004g112 [Nannochlorop... [more]
XP_020662035.15.800e-1224.53intraflagellar transport protein 57 homolog isofor... [more]
XP_020662036.15.400e-1023.68intraflagellar transport protein 57 homolog isofor... [more]
XP_003763614.15.400e-1025.54intraflagellar transport protein 57 homolog isofor... [more]
XP_010565613.11.600e-925.20PREDICTED: intraflagellar transport protein 57 hom... [more]
XP_010565614.11.600e-925.20PREDICTED: intraflagellar transport protein 57 hom... [more]
XP_010565615.11.600e-925.20PREDICTED: intraflagellar transport protein 57 hom... [more]
XP_011582551.12.100e-924.05PREDICTED: intraflagellar transport protein 57 hom... [more]
XP_011582559.12.100e-924.05PREDICTED: intraflagellar transport protein 57 hom... [more]
XP_011582565.12.100e-924.05PREDICTED: intraflagellar transport protein 57 hom... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL086nonsL086Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR118ngnoR118Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G01870.1NO05G01870.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|664247gene_2978Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100004g112gene2364Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G01870.1NO05G01870.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G01870 ID=NO05G01870|Name=NO05G01870|organism=Nannochloropsis oceanica|type=gene|length=1316bp
ATGTCACCGCAGCCGCTACAGCTACAGACCTCCTCTGCGTCATCGACCAC
ATCTGCTGCTGCTGATGCTGCTGCTTCTGTCCCAGCGCAAGACTGGAGAA
GAGTCGAGgtaggggtacacttgatgcagggctacgcggcaaagaaaaaa
tgtaccagtagtcgataacaataaatttaccacattacaaaaccatcagG
GAACGCTTTTTCTTATGATGGAGTCCATCGTCGAGAAGCTAAAAGTGCTC
GATTTAAAGGGTGCCGGTAGACCCCTGTCGTGTCCTCCTCCTCGCCTGGA
CAGGTTGTCCTTCGTAGTAAAGCAGCCGCGACAGCACGCGCTGTTTCTCA
CGGTAGCATCATGGCTGTGCAATCGATTGAAGGGTGAATCCGATCCTACA
CACTGCCACACCACCGTTGAGGCACTCGTCGCCGACCTCAGCAACCTGCA
GCTTTGCGGCATGTCAACGGGAGAAGAGATGGCTGCACTAAAGCTAGGAT
ACGGAAAGGACGTATGCCGATTGTTGGACATTCTTTGCAATGCTGCTCTG
GCTAAAATTGGATTTGTATGGCAAGCTCCAGTGTACGTGCCATCGGAAGA
GACTTTGAATAAGGCTGAGAGCGAGGAGGCAGCAGCAGCACCCGAAAAGA
ACGGATCCACAAGCATGTTGTCTTTCACGACTCTCCAACCAGAAGCTAAA
TTGGCAGCTAAATTGACAGAAGCCAAAGAATCCAAGAGTTGCACAAGTCC
AGATGTCGCCGAGGGCAAGAGCTGGGACCCCAAACTCCCACTGAAGCACG
ACGAGGAGAGTGAAAGCAAAGAGCAGCGGTGCAGGGAGCGAGTGGGACAA
GTCAAGGTTCAAATTAATGAAGCTGAAAACGCGCACCAGATTAAACAAGG
ACGGGTGGACACTCTCAAGATAGAGTTCGGGCGGCTCCAAGATCGATGCG
ACCGTTTGCAGCGCGAAGAAGAGGAGGCTCTCCGATGGGAACACCCATCA
GGAGAGGAAGGCTCGACGTGGCAGACAGGAGGAGGAAGTGGAGGAAAGGG
AGGAGAAAGAATGGCATATGACTCTCCAATGGTAATGATGAGACGAGGCT
TGGAAAAGGTGAATGAAGAAATTAAGGCATTTGACGTACGAATAGGGGTG
ATGCAGCACATACTGCTGCATCGAGCTGGCCGCTTGAGGGCACTGGAGGA
GGAAGAGGAGGAGGACGAGGAGGAGGAGACAAGGAGGGGAAGAGAGAATG
AGCAGGCTATGAGGCTATATTGAGCGGGAAAAAGGAGCAAACGTCTCCAA
GCGAGTGTTTGTGCTT
back to top

protein sequence of NO05G01870.1

>NO05G01870.1-protein ID=NO05G01870.1-protein|Name=NO05G01870.1|organism=Nannochloropsis oceanica|type=polypeptide|length=394bp
MSPQPLQLQTSSASSTTSAAADAAASVPAQDWRRVEGTLFLMMESIVEKL
KVLDLKGAGRPLSCPPPRLDRLSFVVKQPRQHALFLTVASWLCNRLKGES
DPTHCHTTVEALVADLSNLQLCGMSTGEEMAALKLGYGKDVCRLLDILCN
AALAKIGFVWQAPVYVPSEETLNKAESEEAAAAPEKNGSTSMLSFTTLQP
EAKLAAKLTEAKESKSCTSPDVAEGKSWDPKLPLKHDEESESKEQRCRER
VGQVKVQINEAENAHQIKQGRVDTLKIEFGRLQDRCDRLQREEEEALRWE
HPSGEEGSTWQTGGGSGGKGGERMAYDSPMVMMRRGLEKVNEEIKAFDVR
IGVMQHILLHRAGRLRALEEEEEEDEEEETRRGRENEQAMRLY*
back to top
Synonyms
Publications