NO05G01340, NO05G01340 (gene) Nannochloropsis oceanica

Overview
NameNO05G01340
Unique NameNO05G01340
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length876
Alignment locationchr5:386114..386989 -

Link to JBrowse

Properties
Property NameValue
DescriptionBrix domain protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:386114..386989 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007109Brix
Homology
BLAST of NO05G01340 vs. NCBI_GenBank
Match: EWM28262.1 (Brix domain protein [Nannochloropsis gaditana])

HSP 1 Score: 525.0 bits (1351), Expect = 1.500e-145
Identity = 253/291 (86.94%), Postives = 275/291 (94.50%), Query Frame = 0
Query:    1 MSTLRRQTRLRKEYLYRKSLEGKEKSAYERKRLIRTALQEGKPIPTELRGEEASLRHEVGLEDEATSTPRSHVDDEYGLAGTRDPKVCVTTSRDPSSRLKQFMKEVKLIFPSAQAVNRGNTKVPELVEACRTHDFTDIVMVQETRGQPDGLLVCHLPLGPTAYFTLSNVVMRHDIEDRATVSEAYPHLIFEGFTSSLGQRVADILKYTFPAPKAETKRVVTFANEDDQIVFRHHTFEKAPGVKGEVTLKEVGPRFDLTLFQVKLGTLEQADAETEYVFRPYMNTAKKRRML 292
            MST+RRQTRLRKEYLYRKSLEGKEK+AYERK+ IR ALQEGKPIPTELRGEE + RHE+ LED+ T+ P +H+DDEYGLAGTRDPKVCVTTSRDPSSRLKQFMKEVKLIFP+AQAVNRGNTKVPELVEACRTHDFTDIV+VQETRGQPDGLLVCHLPLGPTAYFT+SNVVMRHDIEDRA VSEAYPHLI EGF S+LG+RVADILK+TFPAP+  ++RVVTFANEDD IVFRHHTFEKAPG KGEVTLKE+GPRFDLT+FQVKLGTLEQ DAETE+VFRPYMNTAKKRR+L
Sbjct:   43 MSTIRRQTRLRKEYLYRKSLEGKEKAAYERKQQIRNALQEGKPIPTELRGEEGNWRHEINLEDDITARPHNHIDDEYGLAGTRDPKVCVTTSRDPSSRLKQFMKEVKLIFPNAQAVNRGNTKVPELVEACRTHDFTDIVVVQETRGQPDGLLVCHLPLGPTAYFTISNVVMRHDIEDRAAVSEAYPHLILEGFVSTLGRRVADILKFTFPAPRPASQRVVTFANEDDHIVFRHHTFEKAPGTKGEVTLKEIGPRFDLTVFQVKLGTLEQTDAETEFVFRPYMNTAKKRRLL 333          
BLAST of NO05G01340 vs. NCBI_GenBank
Match: OAE26357.1 (hypothetical protein AXG93_4324s1240 [Marchantia polymorpha subsp. ruderalis] >PTQ42162.1 hypothetical protein MARPO_0031s0129 [Marchantia polymorpha])

HSP 1 Score: 397.1 bits (1019), Expect = 4.600e-107
Identity = 188/291 (64.60%), Postives = 238/291 (81.79%), Query Frame = 0
Query:    4 LRRQTRLRKEYLYRKSLEGKEKSAYERKRLIRTALQEGKPIPTELRGEEASLRHEVGLEDEATSTPRSHVDDEYGLAGTRDPKVCVTTSRDPSSRLKQFMKEVKLIFPSAQAVNRGNTKVPELVEACRTHDFTDIVMVQETRGQPDGLLVCHLPLGPTAYFTLSNVVMRHDIEDR---ATVSEAYPHLIFEGFTSSLGQRVADILKYTFPAPKAETKRVVTFANEDDQIVFRHHTFEKAPGVKGEVTLKEVGPRFDLTLFQVKLGTLEQADAETEYVFRPYMNTAKKRRML 292
            +RR TRLR+EYLYRKSLEGKE++ YE+KR IR AL+EGKPIPTELR EEA+LR E+ LED+ T+  R+H+DDEY  A  +DPK+ +TTSRDPSSRL QF+KE+K++FP+AQ +NRG   + E+VE+CR+HDFTDI+MV E RG+PDGL+VCHLP GPTAYF L NVV RHDI+D+    T+SEAYPHLI E F++ LGQR A+ILKY FP PKA+TKR++T AN  D I FRHH +EK  GVK  + LKEVGPRF+L L+Q+KLGT++QA+A+ E+V RPYMN+++KR  L
Sbjct:    2 IRRTTRLRREYLYRKSLEGKERTLYEKKRKIRLALEEGKPIPTELRNEEAALREEIDLEDDNTAELRTHIDDEYAHADEKDPKILLTTSRDPSSRLTQFVKELKIVFPNAQRINRGGQVISEIVESCRSHDFTDIIMVHEHRGEPDGLIVCHLPFGPTAYFGLLNVVTRHDIKDKQTLGTMSEAYPHLILENFSTKLGQRTANILKYLFPEPKADTKRIITMANSADYISFRHHVYEKPAGVK-SIELKEVGPRFELRLYQIKLGTMDQAEAQNEWVIRPYMNSSRKRTAL 291          
BLAST of NO05G01340 vs. NCBI_GenBank
Match: GAQ87625.1 (IMP4 [Klebsormidium nitens])

HSP 1 Score: 395.6 bits (1015), Expect = 1.300e-106
Identity = 191/291 (65.64%), Postives = 235/291 (80.76%), Query Frame = 0
Query:    4 LRRQTRLRKEYLYRKSLEGKEKSAYERKRLIRTALQEGKPIPTELRGEEASLRHEVGLEDEATSTPRSHVDDEYGLAGTRDPKVCVTTSRDPSSRLKQFMKEVKLIFPSAQAVNRGNTKVPELVEACRTHDFTDIVMVQETRGQPDGLLVCHLPLGPTAYFTLSNVVMRHDIEDRA---TVSEAYPHLIFEGFTSSLGQRVADILKYTFPAPKAETKRVVTFANEDDQIVFRHHTFEKAPGVKGEVTLKEVGPRFDLTLFQVKLGTLEQADAETEYVFRPYMNTAKKRRML 292
            LRR  RLR+EYLYRKSLEGKE++ YERKR IR AL EGKPIPTELR EEA+LR E+ LED+ T+  R+H+DDEY  AG RDPK+ +TTSRDPSSRL QF+KE+K++FP+AQ +NRG   + ++VEACR++DFTDIVMV E RG+PDGL+VCHLP GPTAYF LSNVV RHDI+DRA   T+SEA+PHLI   F + LG R  +ILK+ FP PK E+KR++TFAN+ D I FRHH +EK  G K  V LKEVGPRF+L L+QVKLGT++Q++AE E+V RPYMN+A+KR  L
Sbjct:    2 LRRNARLRREYLYRKSLEGKERAVYERKRKIREALAEGKPIPTELRNEEAALRQEIELEDDVTAEQRTHIDDEYARAGERDPKILLTTSRDPSSRLTQFVKELKIVFPNAQRINRGGQVISQIVEACRSNDFTDIVMVHEHRGEPDGLVVCHLPFGPTAYFGLSNVVTRHDIKDRAAVGTMSEAFPHLILNNFNTKLGLRTQNILKFLFPVPKDESKRIITFANQSDYISFRHHIYEKPKGAK-SVELKEVGPRFELRLYQVKLGTMDQSEAEDEWVIRPYMNSARKRTAL 291          
BLAST of NO05G01340 vs. NCBI_GenBank
Match: XP_009415771.1 (PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4 [Musa acuminata subsp. malaccensis])

HSP 1 Score: 391.3 bits (1004), Expect = 2.500e-105
Identity = 184/291 (63.23%), Postives = 235/291 (80.76%), Query Frame = 0
Query:    4 LRRQTRLRKEYLYRKSLEGKEKSAYERKRLIRTALQEGKPIPTELRGEEASLRHEVGLEDEATSTPRSHVDDEYGLAGTRDPKVCVTTSRDPSSRLKQFMKEVKLIFPSAQAVNRGNTKVPELVEACRTHDFTDIVMVQETRGQPDGLLVCHLPLGPTAYFTLSNVVMRHDIEDR---ATVSEAYPHLIFEGFTSSLGQRVADILKYTFPAPKAETKRVVTFANEDDQIVFRHHTFEKAPGVKGEVTLKEVGPRFDLTLFQVKLGTLEQADAETEYVFRPYMNTAKKRRML 292
            LRR TRLR+EYLYRKSLEGKE+  YE+KR IR AL+EGKPIPTELR EEA+LR E+ LEDE T+ PR+H+DDEY  A  +DP++ +TTSR+PS  L QF+KE+K++FP++  +NRG   + E++E+CR H+FTD+V+V E RGQPDGL+VCHLP GPTAYF L NVV RHDI+D+    T+SEAYPHLI + FTS LGQR A+ILK+ FP PK ++KR++TFAN+ D I FRHH +EK  G K  V LKEVGPRF+L L+Q+KLGT++Q++A+ E+V RPYMNTAKKR +L
Sbjct:    2 LRRNTRLRREYLYRKSLEGKEREYYEKKRKIREALEEGKPIPTELRNEEAALRQEIDLEDEYTAVPRTHIDDEYATASEKDPRILLTTSRNPSQPLTQFVKELKIVFPNSTRMNRGGQVISEIIESCRAHEFTDVVLVHEHRGQPDGLIVCHLPFGPTAYFGLLNVVTRHDIKDKKAVGTMSEAYPHLILDNFTSKLGQRTANILKHLFPEPKPDSKRIITFANQSDYISFRHHVYEKRGGPK-SVELKEVGPRFELRLYQIKLGTVDQSEAQNEWVIRPYMNTAKKRNVL 291          
BLAST of NO05G01340 vs. NCBI_GenBank
Match: XP_006836257.1 (U3 small nucleolar ribonucleoprotein protein IMP4 [Amborella trichopoda] >ERM99110.1 hypothetical protein AMTR_s00101p00134540 [Amborella trichopoda])

HSP 1 Score: 391.0 bits (1003), Expect = 3.300e-105
Identity = 186/291 (63.92%), Postives = 234/291 (80.41%), Query Frame = 0
Query:    4 LRRQTRLRKEYLYRKSLEGKEKSAYERKRLIRTALQEGKPIPTELRGEEASLRHEVGLEDEATSTPRSHVDDEYGLAGTRDPKVCVTTSRDPSSRLKQFMKEVKLIFPSAQAVNRGNTKVPELVEACRTHDFTDIVMVQETRGQPDGLLVCHLPLGPTAYFTLSNVVMRHDIEDR---ATVSEAYPHLIFEGFTSSLGQRVADILKYTFPAPKAETKRVVTFANEDDQIVFRHHTFEKAPGVKGEVTLKEVGPRFDLTLFQVKLGTLEQADAETEYVFRPYMNTAKKRRML 292
            LRR  RLR+EYLYRK+LEGKE+  YE+KR IR AL+EGKPIPTELR EE +LRHE+ LED+ T+  ++HVDDEY  A   DPK+ +TTSRDPSSRL QF+KE+K +FP+AQ +NRGN  + E+VE CRTHDFTDIVMV E RG+PDGL+VCHLP GPTAYF L NVV RHDI+D+    T+SEAYPHLI   F+S LG+R A+ILK+ FP PK ++KR++TFAN+ D I FRHH ++K  G K  + LKEVGPRF+L L+Q+KLGT++Q++A+ E+V RPYMNTAKK++ L
Sbjct:    2 LRRNIRLRREYLYRKNLEGKERLLYEKKRKIRKALEEGKPIPTELRKEEFALRHEIDLEDDQTAVQKTHVDDEYANASEMDPKILLTTSRDPSSRLSQFVKELKFVFPNAQRMNRGNQVISEIVETCRTHDFTDIVMVHEHRGEPDGLIVCHLPFGPTAYFGLLNVVTRHDIKDKKVIGTMSEAYPHLILHNFSSKLGERTANILKHLFPVPKPDSKRIITFANQSDYISFRHHVYQKDGGPK-SIELKEVGPRFELRLYQIKLGTVDQSEAQNEWVIRPYMNTAKKQKAL 291          
BLAST of NO05G01340 vs. NCBI_GenBank
Match: XP_002990678.1 (U3 small nucleolar ribonucleoprotein protein IMP4 [Selaginella moellendorffii] >EFJ08310.1 hypothetical protein SELMODRAFT_185462 [Selaginella moellendorffii])

HSP 1 Score: 390.6 bits (1002), Expect = 4.300e-105
Identity = 184/291 (63.23%), Postives = 232/291 (79.73%), Query Frame = 0
Query:    4 LRRQTRLRKEYLYRKSLEGKEKSAYERKRLIRTALQEGKPIPTELRGEEASLRHEVGLEDEATSTPRSHVDDEYGLAGTRDPKVCVTTSRDPSSRLKQFMKEVKLIFPSAQAVNRGNTKVPELVEACRTHDFTDIVMVQETRGQPDGLLVCHLPLGPTAYFTLSNVVMRHDIEDR---ATVSEAYPHLIFEGFTSSLGQRVADILKYTFPAPKAETKRVVTFANEDDQIVFRHHTFEKAPGVKGEVTLKEVGPRFDLTLFQVKLGTLEQADAETEYVFRPYMNTAKKRRML 292
            +RR  RLR+EYLYRKSLEGKE+  YE+KR I+ ALQEGKP+PTELR +EASLR E+ LEDE T+ P +HVDDEY  AG  DPK+ +TTSRDPSSRL QF+KE+K++FP+AQ +NRG   + E+VE+CR HDFTDI+MV E RG+PDGL+VCHLP GPTAYF L NVV RHDI+D+    T+SEAYPHLI   F + LG R ++ILKY FP PK ++KR++TFAN+ D I FRHH +EK  GVK  + LKEVGPRF+L L+Q+KLGT++Q +A+ E+V RPYMN+++KR  L
Sbjct:    2 IRRNARLRREYLYRKSLEGKEREVYEKKRKIKQALQEGKPLPTELRNDEASLRQEIDLEDENTAEPTTHVDDEYAYAGEVDPKILLTTSRDPSSRLTQFVKELKIVFPNAQRMNRGGQVIAEIVESCRAHDFTDIIMVHEHRGEPDGLIVCHLPYGPTAYFGLMNVVTRHDIKDKKGLGTMSEAYPHLILNNFNTKLGMRTSNILKYLFPVPKPDSKRLITFANQQDYISFRHHVYEKQGGVK-SIELKEVGPRFELRLYQIKLGTVDQVEAQNEWVIRPYMNSSRKRAAL 291          
BLAST of NO05G01340 vs. NCBI_GenBank
Match: XP_024529370.1 (U3 small nucleolar ribonucleoprotein protein IMP4 [Selaginella moellendorffii])

HSP 1 Score: 389.4 bits (999), Expect = 9.700e-105
Identity = 183/291 (62.89%), Postives = 232/291 (79.73%), Query Frame = 0
Query:    4 LRRQTRLRKEYLYRKSLEGKEKSAYERKRLIRTALQEGKPIPTELRGEEASLRHEVGLEDEATSTPRSHVDDEYGLAGTRDPKVCVTTSRDPSSRLKQFMKEVKLIFPSAQAVNRGNTKVPELVEACRTHDFTDIVMVQETRGQPDGLLVCHLPLGPTAYFTLSNVVMRHDIEDR---ATVSEAYPHLIFEGFTSSLGQRVADILKYTFPAPKAETKRVVTFANEDDQIVFRHHTFEKAPGVKGEVTLKEVGPRFDLTLFQVKLGTLEQADAETEYVFRPYMNTAKKRRML 292
            +RR  RLR+EYLYRKSLEGKE+  YE+KR I+ ALQEGKP+PTELR +EASLR E+ LED+ T+ P +HVDDEY  AG  DPK+ +TTSRDPSSRL QF+KE+K++FP+AQ +NRG   + E+VE+CR HDFTDI+MV E RG+PDGL+VCHLP GPTAYF L NVV RHDI+D+    T+SEAYPHLI   F + LG R ++ILKY FP PK ++KR++TFAN+ D I FRHH +EK  GVK  + LKEVGPRF+L L+Q+KLGT++Q +A+ E+V RPYMN+++KR  L
Sbjct:    2 IRRNARLRREYLYRKSLEGKEREVYEKKRKIKQALQEGKPLPTELRNDEASLRQEIDLEDDNTAEPTTHVDDEYAYAGEVDPKILLTTSRDPSSRLTQFVKELKIVFPNAQRMNRGGQVIAEIVESCRAHDFTDIIMVHEHRGEPDGLIVCHLPYGPTAYFGLMNVVTRHDIKDKKGLGTMSEAYPHLILNNFNTKLGMRTSNILKYLFPVPKPDSKRLITFANQQDYISFRHHVYEKQGGVK-SIELKEVGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMNSSRKRAAL 291          
BLAST of NO05G01340 vs. NCBI_GenBank
Match: XP_006438885.1 (U3 small nucleolar ribonucleoprotein protein IMP4 [Citrus clementina] >XP_006482988.1 PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4 [Citrus sinensis] >ESR52125.1 hypothetical protein CICLE_v10032276mg [Citrus clementina])

HSP 1 Score: 388.3 bits (996), Expect = 2.200e-104
Identity = 184/291 (63.23%), Postives = 232/291 (79.73%), Query Frame = 0
Query:    4 LRRQTRLRKEYLYRKSLEGKEKSAYERKRLIRTALQEGKPIPTELRGEEASLRHEVGLEDEATSTPRSHVDDEYGLAGTRDPKVCVTTSRDPSSRLKQFMKEVKLIFPSAQAVNRGNTKVPELVEACRTHDFTDIVMVQETRGQPDGLLVCHLPLGPTAYFTLSNVVMRHDIEDR---ATVSEAYPHLIFEGFTSSLGQRVADILKYTFPAPKAETKRVVTFANEDDQIVFRHHTFEKAPGVKGEVTLKEVGPRFDLTLFQVKLGTLEQADAETEYVFRPYMNTAKKRRML 292
            LRR  RLR+EYLYRKSLEGKE+  YE+KR I+ ALQEGKPIPTELR EEA+LR E+ LEDE T+ PRSH+DDEY  A  RDPK+ +TTSRDPS+ L QF+KE+K +FP+AQ +NRG   + E++E CR H+FTD+V+V E RG PDGL++CHLP GPTAYF L NVV RHDI+DR    T+ EAYPHLI + F S LG+R A+ILK+ FP PKA+TKR++TFAN+ D I FRHH +EK  G K  + LKE+GPRF+L L+Q+KLGT++Q++A+ E+V RPYMNT+KKR+ L
Sbjct:    2 LRRNIRLRREYLYRKSLEGKERLLYEKKRKIKEALQEGKPIPTELRNEEAALRQEIDLEDENTAIPRSHIDDEYANATERDPKILLTTSRDPSAPLTQFVKELKFVFPNAQRMNRGGQVISEIIETCRAHEFTDVVLVHEHRGVPDGLIICHLPFGPTAYFGLLNVVTRHDIKDRKAIGTMPEAYPHLILDNFKSKLGERTANILKHLFPVPKADTKRIITFANQSDYISFRHHIYEKQGGPK-SLELKEIGPRFELRLYQIKLGTVDQSEAQIEWVIRPYMNTSKKRKFL 291          
BLAST of NO05G01340 vs. NCBI_GenBank
Match: KDO83212.1 (hypothetical protein CISIN_1g022723mg [Citrus sinensis])

HSP 1 Score: 388.3 bits (996), Expect = 2.200e-104
Identity = 184/291 (63.23%), Postives = 232/291 (79.73%), Query Frame = 0
Query:    4 LRRQTRLRKEYLYRKSLEGKEKSAYERKRLIRTALQEGKPIPTELRGEEASLRHEVGLEDEATSTPRSHVDDEYGLAGTRDPKVCVTTSRDPSSRLKQFMKEVKLIFPSAQAVNRGNTKVPELVEACRTHDFTDIVMVQETRGQPDGLLVCHLPLGPTAYFTLSNVVMRHDIEDR---ATVSEAYPHLIFEGFTSSLGQRVADILKYTFPAPKAETKRVVTFANEDDQIVFRHHTFEKAPGVKGEVTLKEVGPRFDLTLFQVKLGTLEQADAETEYVFRPYMNTAKKRRML 292
            LRR  RLR+EYLYRKSLEGKE+  YE+KR I+ ALQEGKPIPTELR EEA+LR E+ LEDE T+ PRSH+DDEY  A  RDPK+ +TTSRDPS+ L QF+KE+K +FP+AQ +NRG   + E++E CR H+FTD+V+V E RG PDGL++CHLP GPTAYF L NVV RHDI+DR    T+ EAYPHLI + F S LG+R A+ILK+ FP PKA+TKR++TFAN+ D I FRHH +EK  G K  + LKE+GPRF+L L+Q+KLGT++Q++A+ E+V RPYMNT+KKR+ L
Sbjct:    2 LRRNIRLRREYLYRKSLEGKERLLYEKKRKIKEALQEGKPIPTELRNEEAALRQEIDLEDENTAIPRSHIDDEYANATERDPKILLTTSRDPSAPLTQFVKELKFVFPNAQRMNRGGQVISEIIETCRAHEFTDVVLVHEHRGVPDGLIICHLPFGPTAYFGLLNVVTRHDIKDRKSIGTMPEAYPHLILDNFKSKLGERTANILKHLFPVPKADTKRIITFANQSDYISFRHHIYEKQGGPK-SLELKEIGPRFELRLYQIKLGTVDQSEAQIEWVIRPYMNTSKKRKFL 291          
BLAST of NO05G01340 vs. NCBI_GenBank
Match: PRW44924.1 (U3 small nucleolar ribonucleo IMP4 [Chlorella sorokiniana])

HSP 1 Score: 388.3 bits (996), Expect = 2.200e-104
Identity = 189/290 (65.17%), Postives = 230/290 (79.31%), Query Frame = 0
Query:    4 LRRQTRLRKEYLYRKSLEGKEKSAYERKRLIRTALQEGKPIPTELRGEEASLRHEVGLEDEATSTPRSHVDDEYGLAGTRDPKVCVTTSRDPSSRLKQFMKEVKLIFPSAQAVNRGNTKVPELVEACRTHDFTDIVMVQETRGQPDGLLVCHLPLGPTAYFTLSNVVMRHDIEDR---ATVSEAYPHLIFEGFTSSLGQRVADILKYTFPAPKAETKRVVTFANEDDQIVFRHHTFEKAPGVKGEVTLKEVGPRFDLTLFQVKLGTLEQADAETEYVFRPYMNTAKKRRM 291
            LRR  RLRKE+LYRKSLEGKEK  YE+KR IR AL+EGKPIPTELR EEA LR +V LED+ T+ PR+H+DDEY  AG RDPK+ +TTSRDPSSRL QF KEVKL+FP+AQ VNRG+  V ELVE+CR HD+TD++MV E RG+PDGL+VCHLP GPTAYF + N V+RHDI D+    T+SEAYPHLIF+ F+S LGQRV+ ILKY FP PK ++KRV+TFAN+ D I FRHHT+E   G K  + LKE GPRF++ L+Q+KLGTL+Q  AETE+  R Y  +AKK ++
Sbjct:    2 LRRNARLRKEFLYRKSLEGKEKELYEKKRKIRQALEEGKPIPTELRREEAELRKQVELEDDNTAVPRTHIDDEYAHAGERDPKILITTSRDPSSRLVQFAKEVKLLFPNAQRVNRGSMVVGELVESCRAHDYTDLIMVHEHRGEPDGLVVCHLPYGPTAYFGVFNTVLRHDIGDKKQVGTISEAYPHLIFDRFSSKLGQRVSSILKYLFPPPKHDSKRVITFANQSDFISFRHHTYEMPKGAK-SIQLKECGPRFEMKLYQIKLGTLDQPHAETEWALRSYTRSAKKSKL 290          
The following BLAST results are available for this feature:
BLAST of NO05G01340 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28262.11.500e-14586.94Brix domain protein [Nannochloropsis gaditana][more]
OAE26357.14.600e-10764.60hypothetical protein AXG93_4324s1240 [Marchantia p... [more]
GAQ87625.11.300e-10665.64IMP4 [Klebsormidium nitens][more]
XP_009415771.12.500e-10563.23PREDICTED: U3 small nucleolar ribonucleoprotein pr... [more]
XP_006836257.13.300e-10563.92U3 small nucleolar ribonucleoprotein protein IMP4 ... [more]
XP_002990678.14.300e-10563.23U3 small nucleolar ribonucleoprotein protein IMP4 ... [more]
XP_024529370.19.700e-10562.89U3 small nucleolar ribonucleoprotein protein IMP4 ... [more]
XP_006438885.12.200e-10463.23U3 small nucleolar ribonucleoprotein protein IMP4 ... [more]
KDO83212.12.200e-10463.23hypothetical protein CISIN_1g022723mg [Citrus sine... [more]
PRW44924.12.200e-10465.17U3 small nucleolar ribonucleo IMP4 [Chlorella soro... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL087nonsL087Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL086nonsL086Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR118ngnoR118Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003736NSK003736Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G01340.1NO05G01340.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|583835gene_2925Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100004g57gene2317Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G01340.1NO05G01340.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G01340 ID=NO05G01340|Name=NO05G01340|organism=Nannochloropsis oceanica|type=gene|length=876bp
ATGAGCACCCTCCGAAGACAAACGCGGCTTCGGAAGGAGTACTTATATCG
GAAGTCTTTGGAAGGCAAGGAGAAGTCGGCGTATGAACGCAAGCGCCTGA
TCCGTACGGCCCTACAAGAAGGCAAGCCCATTCCCACGGAGCTGCGGGGC
GAGGAGGCCAGCTTGCGGCATGAGGTCGGGTTGGAGGACGAGGCAACCTC
CACACCTCGGTCGCACGTGGATGATGAGTATGGTTTGGCTGGCACGCGGG
ACCCAAAAGTTTGTGTGACCACGTCGCGTGATCCGTCCTCGCGGCTGAAG
CAGTTTATGAAGGAAGTCAAGCTCATCTTTCCCAGTGCCCAGGCAGTCAA
CAGAGGCAATACCAAGGTCCCCGAGCTGGTGGAAGCTTGTCGCACGCATG
ACTTTACGGATATTGTTATGGTTCAAGAAACGAGGGGGCAGCCCGATGGG
TTGCTGGTGTGTCACTTGCCTTTGGGTCCCACTGCTTATTTCACCTTGTC
GAATGTGGTGATGCGGCATGATATTGAAGACCGAGCTACGGTTTCGGAGG
CCTACCCTCACCTAATCTTTGAGGGATTTACGTCTAGCCTAGGGCAGAGG
GTGGCAGACATTTTGAAGTATACGTTTCCGGCGCCAAAGGCCGAGACGAA
GCGGGTGGTGACGTTTGCGAATGAGGATGACCAGATCGTGTTTCGGCATC
ACACTTTTGAGAAGGCTCCGGGAGTGAAGGGGGAGGTGACTCTCAAGGAG
GTGGGGCCTCGGTTTGATCTGACCTTGTTTCAAGTCAAATTGGGAACGTT
GGAGCAGGCGGATGCGGAAACAGAGTATGTTTTCAGGCCGTACATGAACA
CAGCCAAGAAGAGGAGGATGCTTTAA
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protein sequence of NO05G01340.1

>NO05G01340.1-protein ID=NO05G01340.1-protein|Name=NO05G01340.1|organism=Nannochloropsis oceanica|type=polypeptide|length=292bp
MSTLRRQTRLRKEYLYRKSLEGKEKSAYERKRLIRTALQEGKPIPTELRG
EEASLRHEVGLEDEATSTPRSHVDDEYGLAGTRDPKVCVTTSRDPSSRLK
QFMKEVKLIFPSAQAVNRGNTKVPELVEACRTHDFTDIVMVQETRGQPDG
LLVCHLPLGPTAYFTLSNVVMRHDIEDRATVSEAYPHLIFEGFTSSLGQR
VADILKYTFPAPKAETKRVVTFANEDDQIVFRHHTFEKAPGVKGEVTLKE
VGPRFDLTLFQVKLGTLEQADAETEYVFRPYMNTAKKRRML*
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