NO05G01290, NO05G01290 (gene) Nannochloropsis oceanica

Overview
NameNO05G01290
Unique NameNO05G01290
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4725
Alignment locationchr5:366490..371214 +

Link to JBrowse

Properties
Property NameValue
DescriptionUbiquilin
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:366490..371214 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR016197Chromodomain-like
IPR029071Ubiquitin-rel_dom
IPR000626Ubiquitin-like
Homology
[Close]
BLAST of NO05G01290 vs. NCBI_GenBank
Match: EWM28302.1 (ubiquitin-like protein [Nannochloropsis gaditana])

HSP 1 Score: 352.1 bits (902), Expect = 6.100e-93
Identity = 240/497 (48.29%), Postives = 272/497 (54.73%), Query Frame = 0 
Query:    1 MLNITIKTLQLGDFHLQVPAESSVQALKVQVKEQTQIPEDRQRLIYRGRVLQDGEALQTYKVEPGHTIHCVARPDVMPPSSASAYAPQPLGGPGGGILGAASAGAYQRLLMGGSRGFPXXXXXXXXXXXXXXXXXXXXXXXXLVGSGGPPGA-GEVPLDPRSLEHVRQGLLTMQSLLAGMEDP----------------ARGRNXXXXXXXXXXXXXXXMDEEGMRTRSFSAAVAADGQFVDVKDTVHQWLEAQILSVDPCERTCRVTYLGWPSRWDETISWSSPRIAPFRTRTTHTMQAPYLSPSPVSASRLQMPVTGRDDVRRVLPEVLLMFRQLERVFVPLVEEVEEVLVREGL-------------REGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAAPLLDRFGRLLADLAPHVAALG--------ALDAATSAVDAYPFGIAAGAG-------GRSRMGMAP 453
            ML+ITIKTLQLGDF LQVPAESSV ALKVQVK+ TQIPE+RQRLIYRGRVLQDGE L TY VE GHTIHCVARP  +P SS+    P+      G   G A  GAY+R+LMGG   F                          V +  P GA  E  ++P+SLEHVRQGL+TM SLL+GM+ P                +  R                M   G R R +       GQ+VDVKDTVHQWLEAQ+LSVD   RTCRVTYLGWP RWDET+SWSSPRIAPFRTRTTH +QAP+LSP+P++A RL +PV GRDD+RRVLPEVLLM R+LE  FVPLVE +EE  V EGL                XXXXXXX                                                D APLLDRFGRLLADLAPHVA L          +D  TS  D     + AG G       G +R G  P
Sbjct:   10 MLSITIKTLQLGDFQLQVPAESSVSALKVQVKDCTQIPEERQRLIYRGRVLQDGEHLSTYNVEAGHTIHCVARPAGVPVSSSQPPVPRT-----GLATGTAPGGAYRRILMGGPHVFGGRGGSLAAGMAAAAASAG-------VLAPVPGGAHREADVNPQSLEHVRQGLMTMYSLLSGMQAPTAMVQGSAGEGSGQTASMTRGRARALQTDERSLALEMGHAGERRRWY------PGQYVDVKDTVHQWLEAQVLSVDEERRTCRVTYLGWPRRWDETLSWSSPRIAPFRTRTTHNLQAPFLSPTPLAAPRLPLPVRGRDDLRRVLPEVLLMLRRLEAYFVPLVENMEEEAVAEGLDXXXXXXXXXXXXXXXXXXXXXXGNLSPWRAEQLREERLQGSRGNRRSRKGHQQLERSRAARRRQAVVLARDTAPLLDRFGRLLADLAPHVATLWETAEETSVPVDGMTSETDGMEGAVTAGDGEDLTSNPGIARPGRVP 488
[Close]
BLAST of NO05G01290 vs. NCBI_GenBank
Match: EWM28303.1 (ubiquitin-like protein [Nannochloropsis gaditana])

HSP 1 Score: 318.2 bits (814), Expect = 9.800e-83
Identity = 240/574 (41.81%), Postives = 272/574 (47.39%), Query Frame = 0 
Query:    1 MLNITIKTLQLGDFHLQVPAESSVQALKVQVKEQTQIPEDRQRLIYRGRVLQDGEALQTYKVEPGHTIHCVARPDVMPPSSASAYAPQPLGGPGGGILGAASAGAYQRLLMGGSRGFPXXXXXXXXXXXXXXXXXXXXXXXXLVGSGGPPGA-GEVPLDPRSLEHVRQGLLTMQSLLAGMEDP----------------ARGRNXXXXXXXXXXXXXXXMDEEGMRTRSFSAAVAADGQFVDVK-----------------------------------------------------------------------------DTVHQWLEAQILSVDPCERTCRVTYLGWPSRWDETISWSSPRIAPFRTRTTHTMQAPYLSPSPVSASRLQMPVTGRDDVRRVLPEVLLMFRQLERVFVPLVEEVEEVLVREGL-------------REGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAAPLLDRFGRLLADLAPHVAALG--------ALDAATSAVDAYPFGIAAGAG-------GRSRMGMAP 453
            ML+ITIKTLQLGDF LQVPAESSV ALKVQVK+ TQIPE+RQRLIYRGRVLQDGE L TY VE GHTIHCVARP  +P SS+    P+      G   G A  GAY+R+LMGG   F                          V +  P GA  E  ++P+SLEHVRQGL+TM SLL+GM+ P                +  R                M   G R R +       GQ+VDVK                                                                             DTVHQWLEAQ+LSVD   RTCRVTYLGWP RWDET+SWSSPRIAPFRTRTTH +QAP+LSP+P++A RL +PV GRDD+RRVLPEVLLM R+LE  FVPLVE +EE  V EGL                XXXXXXX                                                D APLLDRFGRLLADLAPHVA L          +D  TS  D     + AG G       G +R G  P
Sbjct:   10 MLSITIKTLQLGDFQLQVPAESSVSALKVQVKDCTQIPEERQRLIYRGRVLQDGEHLSTYNVEAGHTIHCVARPAGVPVSSSQPPVPRT-----GLATGTAPGGAYRRILMGGPHVFGGRGGSLAAGMAAAAASAG-------VLAPVPGGAHREADVNPQSLEHVRQGLMTMYSLLSGMQAPTAMVQGSAGEGSGQTASMTRGRARALQTDERSLALEMGHAGERRRWY------PGQYVDVKGMDRMSRVLLGSLLESMMVRRGKRSPVTRTQPINRLRVSLTCAHSSMVADVAGRNCRSSNIAYFKISSRPSRLPCPADTVHQWLEAQVLSVDEERRTCRVTYLGWPRRWDETLSWSSPRIAPFRTRTTHNLQAPFLSPTPLAAPRLPLPVRGRDDLRRVLPEVLLMLRRLEAYFVPLVENMEEEAVAEGLDXXXXXXXXXXXXXXXXXXXXXXGNLSPWRAEQLREERLQGSRGNRRSRKGHQQLERSRAARRRQAVVLARDTAPLLDRFGRLLADLAPHVATLWETAEETSVPVDGMTSETDGMEGAVTAGDGEDLTSNPGIARPGRVP 565
[Close]
BLAST of NO05G01290 vs. NCBI_GenBank
Match: XP_005852763.1 (ubiquilin [Nannochloropsis gaditana CCMP526] >EKU23071.1 ubiquilin [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 313.5 bits (802), Expect = 2.400e-81
Identity = 182/329 (55.32%), Postives = 209/329 (63.53%), Query Frame = 0 
Query:    1 MLNITIKTLQLGDFHLQVPAESSVQALKVQVKEQTQIPEDRQRLIYRGRVLQDGEALQTYKVEPGHTIHCVARPDVMPPSSASAYAPQPLGGPGGGILGAASAGAYQRLLMGGSRGFPXXXXXXXXXXXXXXXXXXXXXXXXLVGSGGPPGA-GEVPLDPRSLEHVRQGLLTMQSLLAGMEDP----------------ARGRNXXXXXXXXXXXXXXXMDEEGMRTRSFSAAVAADGQFVDVKDTVHQWLEAQILSVDPCERTCRVTYLGWPSRWDETISWSSPRIAPFRTRTTHTMQAPYLSPSPVSASRLQMPVTGRDDVRRVLPE 313
            ML+ITIKTLQLGDF LQVPAESSV ALKVQVK+ TQIPE+RQRLIYRGRVLQDGE L TY VE GHTIHCVARP  +P SS+    P+      G   G A  GAY+R+LMGG   F                          V +  P GA  E  ++P+SLEHVRQGL+TM SLL+GM+ P                +  R                M   G R R +       GQ+VDVKDTVHQWLEAQ+LSVD   RTCRVTYLGWP RWDET+SWSSPRIAPFRTRTTH +QAP+LSP+P++A RL +PV GRDD+RRVLPE
Sbjct:   10 MLSITIKTLQLGDFQLQVPAESSVSALKVQVKDCTQIPEERQRLIYRGRVLQDGEHLSTYNVEAGHTIHCVARPAGVPVSSSQPPVPRT-----GLATGTAPGGAYRRILMGGPHVFGGRGGSLAAGMAAAAASAG-------VLAPVPGGAHREADVNPQSLEHVRQGLMTMYSLLSGMQAPTAMVQGSAGEGSGQTASMTRGRARALQTDERSLALEMGHAGERRRWY------PGQYVDVKDTVHQWLEAQVLSVDEERRTCRVTYLGWPRRWDETLSWSSPRIAPFRTRTTHNLQAPFLSPTPLAAPRLPLPVRGRDDLRRVLPE 320
[Close]
BLAST of NO05G01290 vs. NCBI_GenBank
Match: XP_008874601.1 (hypothetical protein H310_10115 [Aphanomyces invadans] >ETV96824.1 hypothetical protein H310_10115 [Aphanomyces invadans])

HSP 1 Score: 146.7 bits (369), Expect = 3.900e-31
Identity = 117/348 (33.62%), Postives = 159/348 (45.69%), Query Frame = 0 
Query:    2 LNITIKTLQLGDFHLQVPAESSVQALKVQVKEQTQIPEDRQRLIYRGRVLQDGEALQTYKVEPGHTIHCVARPD----VMPPSSASAYAPQPLGGPGGGI--------LGAASAGAYQRLLMGGSRGF-PXXXXXXXXXXXXXXXXXXXXXXXXLVGSGGPPGAGEVPLDPRSLEHVRQGLLTMQSLLAGMEDPARGRNXXXXXXXXXXXXXXXMDEEGMRTRSFSAAVAADGQFVDVKDTVHQWLEAQILSVDPCERTCRVTYLGWPSRWDETISWSSPRIAPFRTRTTH-TMQAPYLSPSPVSASRLQMPVTGRDDVRRVLPEVLLMFRQLERVFVPLVEEVEEVL 336
            + I IKTL    F L V    S++ LK  ++  T +P  RQRLIYRG++L+DG+ L  Y VE GHT+H VARPD       P+  S+    PL      +           AS+ A  R  +G   GF                             S  P         P S+EH+RQGLLT+QS+L+    P                      E    +R F       GQ++DVKDTV+QWLE  IL V+  E    V Y GWPSRWDE I   SPR+A FRTRT H    + +LSP+P+ AS      + +  +R +LP++  +  ++    +P V E+   L
Sbjct:   48 MEIRIKTLNDHTFSLTVARSVSIRDLKTTLQTTTAVPPQRQRLIYRGKLLRDGDLLSAYNVEDGHTVHMVARPDRAQQPTSPTPLSSSRLAPLHDTAEMLQSRLARLDASTASSLATMRRRLGVDSGFATSLPAASRMHHDRLDFLRSRYGPSDSTPSNEPESEASTIAPPPSVEHIRQGLLTIQSMLSLPATPVAA------------------GEPSPPSRQFFV-----GQWLDVKDTVNQWLEGTILEVN--EDQVFVHYHGWPSRWDEWIDRKSPRLAAFRTRTLHGAGTSRHLSPAPMLASHQPAAGSTQTTIRTLLPQLQSVLHEM----LPFVNELASAL 366
[Close]
BLAST of NO05G01290 vs. NCBI_GenBank
Match: XP_008609693.1 (hypothetical protein SDRG_05739 [Saprolegnia diclina VS20] >EQC36911.1 hypothetical protein SDRG_05739 [Saprolegnia diclina VS20])

HSP 1 Score: 142.5 bits (358), Expect = 7.400e-30
Identity = 113/335 (33.73%), Postives = 155/335 (46.27%), Query Frame = 0 
Query:    2 LNITIKTLQLGDFHLQVPAESSVQALKVQVKEQTQIPEDRQRLIYRGRVLQDGEALQTYKVEPGHTIHCVARPD-VMPPSSASAYAPQPLGGPGGGI-----------LGAASAGAYQRLLMGGSRGFPXXXXXXXXXXXXXXXXXXXXXXXXLVGSGGPPGAGEVPL---DPRSLEHVRQGLLTMQSLLAGMEDPARGRNXXXXXXXXXXXXXXXMDEEGMRTRSFSAAVAADGQFVDVKDTVHQWLEAQILSVDPCERTCRVTYLGWPSRWDETISWSSPRIAPFRTRTTHTMQAPYLSPSP-VSASRLQMPVTG-------RDDVRRVLPEV 314
            + I IKTL    F LQV    +V  LK  ++  TQ+PE RQRLIYRG++++D + L  Y VE GHT+H VA+P+ +      SA   +PL  P   +           L +A+A A  R  +G                              L  +  P      P    DP   EH+ QGLLT+++LL+ +                         E G   R  +  +   GQ++DVKDTV+QWLE  +L +       RV Y GWP+RWDE I   SPR+A FRTRT H   +P+LSP+P V ++R   P T        RD +R +LP V
Sbjct:   22 IEIRIKTLNDHSFALQVRPAIAVSELKEMLRTTTQVPEHRQRLIYRGKLMKDADQLAAYNVEDGHTLHLVAKPEQIYSADGTSASETEPLLPPARSVLRPQLRPRQSRLDSAAAFASMRRRLGLDEDGSLLSDALNFRQPRPTAPVPSDAERALDLTSEPESEARPPAVVHDP--FEHIEQGLLTLRTLLSTVTSATPTETTSA--------------ERGATLR--ARRLFYVGQWLDVKDTVNQWLEGTVLELSATH--VRVHYHGWPTRWDEWIEKISPRLAAFRTRTLHPTGSPFLSPTPIVRSARSTPPPTARSLVPQIRDALRDMLPYV 336
[Close]
BLAST of NO05G01290 vs. NCBI_GenBank
Match: XP_008609692.1 (hypothetical protein, variant [Saprolegnia diclina VS20] >EQC36912.1 hypothetical protein, variant [Saprolegnia diclina VS20])

HSP 1 Score: 142.5 bits (358), Expect = 7.400e-30
Identity = 113/335 (33.73%), Postives = 155/335 (46.27%), Query Frame = 0 
Query:    2 LNITIKTLQLGDFHLQVPAESSVQALKVQVKEQTQIPEDRQRLIYRGRVLQDGEALQTYKVEPGHTIHCVARPD-VMPPSSASAYAPQPLGGPGGGI-----------LGAASAGAYQRLLMGGSRGFPXXXXXXXXXXXXXXXXXXXXXXXXLVGSGGPPGAGEVPL---DPRSLEHVRQGLLTMQSLLAGMEDPARGRNXXXXXXXXXXXXXXXMDEEGMRTRSFSAAVAADGQFVDVKDTVHQWLEAQILSVDPCERTCRVTYLGWPSRWDETISWSSPRIAPFRTRTTHTMQAPYLSPSP-VSASRLQMPVTG-------RDDVRRVLPEV 314
            + I IKTL    F LQV    +V  LK  ++  TQ+PE RQRLIYRG++++D + L  Y VE GHT+H VA+P+ +      SA   +PL  P   +           L +A+A A  R  +G                              L  +  P      P    DP   EH+ QGLLT+++LL+ +                         E G   R  +  +   GQ++DVKDTV+QWLE  +L +       RV Y GWP+RWDE I   SPR+A FRTRT H   +P+LSP+P V ++R   P T        RD +R +LP V
Sbjct:   22 IEIRIKTLNDHSFALQVRPAIAVSELKEMLRTTTQVPEHRQRLIYRGKLMKDADQLAAYNVEDGHTLHLVAKPEQIYSADGTSASETEPLLPPARSVLRPQLRPRQSRLDSAAAFASMRRRLGLDEDGSLLSDALNFRQPRPTAPVPSDAERALDLTSEPESEARPPAVVHDP--FEHIEQGLLTLRTLLSTVTSATPTETTSA--------------ERGATLR--ARRLFYVGQWLDVKDTVNQWLEGTVLELSATH--VRVHYHGWPTRWDEWIEKISPRLAAFRTRTLHPTGSPFLSPTPIVRSARSTPPPTARSLVPQIRDALRDMLPYV 336
[Close]
BLAST of NO05G01290 vs. NCBI_GenBank
Match: OQR99365.1 (ubiquitin family protein [Achlya hypogyna])

HSP 1 Score: 138.7 bits (348), Expect = 1.100e-28
Identity = 110/342 (32.16%), Postives = 150/342 (43.86%), Query Frame = 0 
Query:    2 LNITIKTLQLGDFHLQVPAESSVQALKVQVKEQTQIPEDRQRLIYRGRVLQDGEALQTYKVEPGHTIHCVARPDVMPPSSASAYAP---QPLGGPGGGI---------LGAASAGAYQRLLMGGSRGFPXXXXXXXXXXXXXXXXXXXXXXXXLVGSGGPPGAGEVPLDP------------------RSLEHVRQGLLTMQSLLAGMEDPARGRNXXXXXXXXXXXXXXXMDEEGMRTRSFSAAVAADGQFVDVKDTVHQWLEAQILSVDPCERTCRVTYLGWPSRWDETISWSSPRIAPFRTRTTHTMQAPYLSPSPVSASRLQMPVTGRDDVRRVLPEV 314
            + I +KTL    F L V     V  LK  +   TQ+PE RQRLIYRG++L+DG+ L  Y +E GHT+H VA+PD        A+ P   +PL  P   +         L +A+A A  R  +G   G                                PPG      DP                   SLEH+ QGL+T+++LL+    P                      + G   RS        GQ++DVKDTV+QWLE  +L V        + Y GWP+RWDE I   SPR+A FRTRT HT  +P+LSP+P     ++ P      VR ++P++
Sbjct:    7 MEIRVKTLNDHSFALTVARTIGVTELKAMLLPATQVPEARQRLIYRGKLLKDGDLLSAYNIENGHTLHMVAKPD-----RIVAFEPDETEPLLAPTRNVTRTRLQPRRLDSAAAFASMRRRLGLDDG-------------GSLLANTSPTATSQAPPSEPPGGTVSDRDPIPDVFAEPEPESIPPPTNDSLEHLTQGLMTIRTLLSTASAPTE---------------TVPAPDRGAVLRSRREFFV--GQWLDVKDTVNQWLEGTVLEVSASH--VHIHYHGWPTRWDEWIEKPSPRLAAFRTRTLHTSASPFLSPTPA----VRQPRAPTTTVRALVPQI 307
[Close]
BLAST of NO05G01290 vs. NCBI_GenBank
Match: XP_012196614.1 (hypothetical protein SPRG_02660 [Saprolegnia parasitica CBS 223.65] >KDO32968.1 hypothetical protein SPRG_02660 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 138.3 bits (347), Expect = 1.400e-28
Identity = 113/335 (33.73%), Postives = 153/335 (45.67%), Query Frame = 0 
Query:    2 LNITIKTLQLGDFHLQVPAESSVQALKVQVKEQTQIPEDRQRLIYRGRVLQDGEALQTYKVEPGHTIHCVARPD-VMPPSSASAYAPQPLGGPGGGI-----------LGAASAGAYQRLLMGGSRGFPXXXXXXXXXXXXXXXXXXXXXXXXLVGSGGPPGAGEVPLDPRSLEHVRQGLLTMQSLL---AGMEDPARGRNXXXXXXXXXXXXXXXMDEEGMRTRSFSAAVAADGQFVDVKDTVHQWLEAQILSVDPCERTCRVTYLGWPSRWDETISWSSPRIAPFRTRTTHTMQAPYLSPSPVSAS-RLQMPVTG-------RDDVRRVLPEV 314
            + I IKTL    F LQV    +V  LK  ++  TQ+PE RQRLIYRG++++D + L  Y VE GHT+H VA+P+ +      SA   +PL  P   +           L +A+A A  R  +G                              L  +  P      P  P   EH+ QGLLT+++LL   A    PA                     E G   R  +  V   GQ++DVKDTV+QWLE  +L +        V Y GWP+RWDE +   SPR+A FRTRT H   +P+ SP+P++ S R   P T        RD +R +LP V
Sbjct:   22 IEIRIKTLNDHSFALQVRPGIAVSELKAMLQTTTQVPEHRQRLIYRGKLMKDADQLAAYNVEDGHTLHLVAKPEQIYSADGTSASETEPLLPPSRNVLRSQLRPRQSRLDSAAAFASMRRRLGLDEDGSLLSDALNFRHARSTASLPSDADTRLDLTPEPEPEARPPAVP--FEHIEQGLLTIRTLLSTAASATPPA-----------------TTGAERGATLR--ARRVFYVGQWLDVKDTVNQWLEGTVLELSATH--VLVHYHGWPTRWDEWVEKISPRLAAFRTRTLHPTGSPFQSPTPIARSARSTPPPTARSLMPQIRDALRDMLPYV 333
[Close]
BLAST of NO05G01290 vs. NCBI_GenBank
Match: XP_009841212.1 (hypothetical protein H257_14963 [Aphanomyces astaci] >ETV69355.1 hypothetical protein H257_14963 [Aphanomyces astaci])

HSP 1 Score: 131.3 bits (329), Expect = 1.700e-26
Identity = 107/344 (31.10%), Postives = 154/344 (44.77%), Query Frame = 0 
Query:    2 LNITIKTLQLGDFHLQVPAESSVQALKVQVKEQTQIPEDRQRLIYRGRVLQDGEALQTYKVEPGHTIHCVARPD------------------VMPPSSASAYAPQPLGGPGGGILGAASAGAYQRLLMGGSRGF----PXXXXXXXXXXXXXXXXXXXXXXXXLVGSGGPPGAGEVPLDPRSLEHVRQGLLTMQSLLAGMEDPARGRNXXXXXXXXXXXXXXXMDEEGMRTRSFSAAVAADGQFVDVKDTVHQWLEAQILSVDPCERTCRVTYLGWPSRWDETISWSSPRIAPFRTRTTHTMQAPYLSPSPVSASRLQMPVTGRD---DVRRVLPEVLLMFRQL 321
            + I IKTL    F L VP   S++ LK  ++  T +P  RQRLIYRG++L+DG+ L  Y VE GH +H VARP+                     P   +A   Q           ++ A   QRL      GF    P                         + S     A   P+ P S+EH+RQGL+T+QS+L+     +R                       +R R F       GQ++DVKDTV+QWLE  +L ++       V Y GWP+RWDE I  +SPR+A FRTRT H   + +LSP+P  ++  Q+     D    +R +LP++  +  ++
Sbjct:   27 MEIRIKTLNDHTFSLTVPRAISIRDLKTTLQGTTSVPPQRQRLIYRGKLLRDGDLLSAYNVEDGHMVHMVARPEXXXXXXXXXXXXXXXXXXXXAPLHDTAELLQSRLARLDASTASSLATMRQRLGAAVDSGFSSMPPPSSQVHHDRLQFLRSRYGNPHDASPLASEPESEASTAPVLP-SVEHIRQGLMTVQSMLSLPATSSR------------DDGLSPASAAPIRRRQFFI-----GQWLDVKDTVNQWLEGTVLDLN--VHQVYVHYHGWPTRWDEWIDATSPRLAAFRTRTLHANTSRHLSPAPSLSNPQQVMPASADTPTTIRALLPQMRSVLHEM 350
[Close]
BLAST of NO05G01290 vs. NCBI_GenBank
Match: XP_009841213.1 (hypothetical protein, variant [Aphanomyces astaci] >ETV69356.1 hypothetical protein, variant [Aphanomyces astaci])

HSP 1 Score: 131.3 bits (329), Expect = 1.700e-26
Identity = 107/344 (31.10%), Postives = 154/344 (44.77%), Query Frame = 0 
Query:    2 LNITIKTLQLGDFHLQVPAESSVQALKVQVKEQTQIPEDRQRLIYRGRVLQDGEALQTYKVEPGHTIHCVARPD------------------VMPPSSASAYAPQPLGGPGGGILGAASAGAYQRLLMGGSRGF----PXXXXXXXXXXXXXXXXXXXXXXXXLVGSGGPPGAGEVPLDPRSLEHVRQGLLTMQSLLAGMEDPARGRNXXXXXXXXXXXXXXXMDEEGMRTRSFSAAVAADGQFVDVKDTVHQWLEAQILSVDPCERTCRVTYLGWPSRWDETISWSSPRIAPFRTRTTHTMQAPYLSPSPVSASRLQMPVTGRD---DVRRVLPEVLLMFRQL 321
            + I IKTL    F L VP   S++ LK  ++  T +P  RQRLIYRG++L+DG+ L  Y VE GH +H VARP+                     P   +A   Q           ++ A   QRL      GF    P                         + S     A   P+ P S+EH+RQGL+T+QS+L+     +R                       +R R F       GQ++DVKDTV+QWLE  +L ++       V Y GWP+RWDE I  +SPR+A FRTRT H   + +LSP+P  ++  Q+     D    +R +LP++  +  ++
Sbjct:   27 MEIRIKTLNDHTFSLTVPRAISIRDLKTTLQGTTSVPPQRQRLIYRGKLLRDGDLLSAYNVEDGHMVHMVARPEXXXXXXXXXXXXXXXXXXXXAPLHDTAELLQSRLARLDASTASSLATMRQRLGAAVDSGFSSMPPPSSQVHHDRLQFLRSRYGNPHDASPLASEPESEASTAPVLP-SVEHIRQGLMTVQSMLSLPATSSR------------DDGLSPASAAPIRRRQFFI-----GQWLDVKDTVNQWLEGTVLDLN--VHQVYVHYHGWPTRWDEWIDATSPRLAAFRTRTLHANTSRHLSPAPSLSNPQQVMPASADTPTTIRALLPQMRSVLHEM 350
The following BLAST results are available for this feature:
BLAST of NO05G01290 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28302.16.100e-9348.29ubiquitin-like protein [Nannochloropsis gaditana][more]
EWM28303.19.800e-8341.81ubiquitin-like protein [Nannochloropsis gaditana][more]
XP_005852763.12.400e-8155.32ubiquilin [Nannochloropsis gaditana CCMP526] >EKU2... [more]
XP_008874601.13.900e-3133.62hypothetical protein H310_10115 [Aphanomyces invad... [more]
XP_008609693.17.400e-3033.73hypothetical protein SDRG_05739 [Saprolegnia dicli... [more]
XP_008609692.17.400e-3033.73hypothetical protein, variant [Saprolegnia diclina... [more]
OQR99365.11.100e-2832.16ubiquitin family protein [Achlya hypogyna][more]
XP_012196614.11.400e-2833.73hypothetical protein SPRG_02660 [Saprolegnia paras... [more]
XP_009841212.11.700e-2631.10hypothetical protein H257_14963 [Aphanomyces astac... [more]
XP_009841213.11.700e-2631.10hypothetical protein, variant [Aphanomyces astaci]... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL087nonsL087Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL086nonsL086Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR118ngnoR118Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003742NSK003742Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G01290.1NO05G01290.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|390356gene_2920Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100004g52gene2312Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G01290.1NO05G01290.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G01290 ID=NO05G01290|Name=NO05G01290|organism=Nannochloropsis oceanica|type=gene|length=4725bp
ATGCTGAACATCACCATCAAGACGCTGCAGCTGGGCGACTTCCACCTCCA
AGTGCCGGCTGAATCCTCTGTACAGGCGCTTAAAGTCCAAGTCAAGgtaa
gaagaaggtgtgaggtggaaagagacgaaagacgaaggaccagaggagga
gactgggaccagcatcctcatgatggtgttgccacagcaaatcagacacc
cactcgacctttgaactgaatccaagtcatatcaccgtgctatgatacca
ggcaagctttgaggcgggccggcatgaggttcttcacactcgacgccgtc
aatccgccatttacgcacaaatatatcccactctccccaaggacgtatct
cactaaatttcccccaatgcacacagGAACAAACCCAAATTCCCGAAGAC
CGTCAACGGTTGATCTACCGCGGACGCGTCCTACAAGATGGAGAGGCCCT
TCAAACATACAAAGTGGAGCCCGGGCACACCATTCACTGTGTCGCCCGTC
CAGATGTTATGCCTCCCTCCTCCGCCTCAGCTTATGCTCCCCAACCTCTA
GGTGGACCGGGCGGCGGTATTTTGGGCGCGGCATCTGCGGGTGCCTACCA
ACGATTGCTCATGGGAGGCTCGCGTGGCTTTCCACGTCCTGGTGGCGGGG
AAGGAGGAGGGCCAGGGGGAAGTTATGCTGCGGGCATGGCGGCAGCAGCT
GCTGGATTGGTAGGGAGTGGGGGGCCACCAGGAGCAGGGGAGGTACCATT
GGATCCGCGAAGCTTAGAGCATGTGCGACAGGGGTTGTTGACGATGCAAA
GCCTGCTGGCGGGGATGGAAGACCCGGCGAGGGGGAGGAACAGCAGAAGC
AGCACCAGCAGCACCAGCAGCAGCAGGGGGAGGGGGATGGATGAGGAAGG
GATGAGGACAAGGTCTTTTTCTGCGGCAGTTGCAGCGGATGgtaggggag
ggaaaagtagattaggaaacagagcggcggcagcgacggctgtccgcgcg
ccaccaatggcgtctgcaccagcagcggtggagggaggagctgtaggggg
ggggatggcgatggtggtggggttggagatcgggtttgttggtttccagG
GCAATTTGTAGATGTAAAAGgtacgcgtaaaagtgagcctctctgtcgta
tttcaaatctgggagctagttgagctttcatttccccttccatccaaaga
gaggtgatgggtttttgaaagtgcattttttccgcccctcatttcatccc
tcccttccttaccactggctgcctccctctctcccccctccagACACTGT
GCACCAATGGTTGGAGGCCCAAATCCTGTCCGTGGATCCCTGCGAACGTA
CCTGTCGGGTGACGTACCTCGGGTGGCCCTCGCGTTGGGACGAGACCATT
TCGTGGAGTAGCCCCCGCATTGCTCCTTTTCGCACGCGGACGACACATAC
CATGCAGGCGCCCTACTTATCTCCTTCCCCTGTGTCTGCGTCACGGTTGC
AGATGCCTGTGACGGGGAGGGACGATGTGAGGAGGGTATTACCGGAGGTG
TTGTTGATGTTCAGGCAGTTGGAAAGGGTGTTTGTACCGCTTGTAGAGGA
GGTGGAGGAGGTGTTGGTGAGGGAGGGATTGAGGGAGGGGGAAGAAAAGG
AGGAGGAGGACAAGAAGGAGGAAGGGGGTGAGGGGGGGAGGAGGgtaaga
aggaggagagggaagagggaggagaggaggggagcgagacagggagtttg
acgccgtgggcggcggagcgggagcgagaggagcgctttttgcagTTGCG
GCAAAATCGACGGAGAAGGGAGCAGCAGGGAGAGAAGGGACAGCAAGAGC
AGCAGGATAGGGCTGCTGCTGCAGCAGCTGCTGCTGCTGCTGCTGTCTTG
GCGAGGGATGCAGCGCCCTTGTTAGATCGCTTTGGACGGTTGCTTGCAGA
TTTGGCACCGCATGTAGCGGCGCTTGGTGCTCTTGATGCTGCTACCTCCG
CTGTCGATGCTTATCCTTTTGGTATAGCTGCGGGTGCTGGAGGGAGATCA
AGGATGGGGATGGCTCCTTCTTCAGCTATGTCGGCATCTAGTCTGCGGCA
AGAAGCAGCGGCAGGAATGAGGAGCATGAGCAGCAGCACCAGCAGCACCA
GTAGTAATGCTTGTGTCCCCGCTGGGGATGGTGAGAATTATGAAGGAAGA
GAATCTAGAGCAACGGGAAGGTGGATGCAAGTAGGAGGAGAGGGAGGGAA
AGGAGGAGTAGGAGGAGGGAGGGCAGAAGTGAGACGAGGACGACGGGCAC
GAGGGCAAGGAAGGAAGGGAGGAGGTGAGGAGGGCCCCATGTCCATGGAG
GAGGATGAGGAGGGAGGCAAGAGTGGGAACGATGCCGCAGATGGTGGCGG
CGGTGCTGCTGCTGGTCCTCCTCCATCACTTGCGTTGGTGCCCAGATTGC
GGAGTCGCAGCCCTGTTGAGCATGGCCGTTTTCAGCCGCAAGCGAGCGTC
ATCAGCAACAACAACAACAACAACAACAACAACAACAACAACAACAACAA
CAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACA
GCAGCAGCAGCAGCAGCAGCAGCAGTGATAGTAATGATGCTGGTGGTGGA
GGAGGAGGAGGAGGAGAAGGAAGAGGAGGAGAGGGAGGAAGAGTGGGGGG
CGGACCGATTGAGGGACGACGTGTGCGAAGTCGGTTGGGCTTGGATAGCA
GCAGCAACAGTAACAGCAACAACAGCAATAGTGTCACCACATCAAGGACG
GCCACCACTACCCACAGGAACGGCAGTGACACAAGCAGCAGTTACAGCAG
CAGCATTCGCAATGGCAGTGGCAGCAGGACGAGCAACAGCCGCAGTAATC
GAGGACTTGGCAGTAGCTCCAGCAGAAGCAGTAGCAGCAGCAGCAGCCGC
AGTAGTAGTAGGAACAGCAATGGGAATCGGGCCCCGCATCTTCGTTCCCA
GGCCCGTGAACGCTCCCCCTCCCCAGAAACGGCTTTTCGTCGCTTAATAG
CCACAGAAGGTGCAGCCGCTCGTAGTGCAGCGGTCGCAGCGGCGTCGGCA
GCAGCAGGAGCAGCAGCGCATGGGAGAGGGATGGTGGGATTGGGTGAGAT
TCACATTCATGCATTTGTGACTCCGATGGGTACGATGATGGGAGGAGGCG
GAGGAGGCGGAGGAGGATACAGCAGCCGCAGTGGTAATGCGAGTTCAGCT
GCTTCCGCTGGGGTTGCTGGTGGTGTGGGTGGAGGGAATGGAATGAGAGC
AGCAGCTCCGGCATCGACTGTAGCAGCAGCGACGGCGGGAAGCAGTATTC
CGGAATCATTACTTTCTTCGTCCTCTTTCTTGCCCTCTTCCTCCTCCCTT
CCTTCGTCTACGTTTCGGAACACCCCACTAGATGGAGGAAATTTAAATTT
TGGGCCACCATTCTTCCAGCGACAGCAGCAACAACAACAACAACAACAAC
AACAACAACAACAACAACAACAACAACAACAACAACAGCGAGATCCATCA
AACATTTGGAGCCCGCCGGACATTGGAAGAGATGATTCCTCTATGTTTAA
TTCGGGTGTCATACACATCCCTTCGTCCTTCCATTCCTCTTCTTTACATC
AACCTCTCTCGATGGGTGGTAGTGAAGAAGTGGGAGGGGGAGCAAACGGA
GGGGAGGAATTACGGAGAGATGGTGTGGAGACCGACGAGGAGAGAGGGCG
GGAAGGAAGGCGGGAAAGAGAGCAGCGCAGTGAGGCTGACGATGGTGGGG
CCAGTAGTCCGTTGTCTTCTTTCTTGCCGTTCTTGCGGCGGTTTTCTCGG
TATGGTTGATGTAGAGAGAGAGATGTGAGGAGGATGCACGGGAGGGATGA
AGACATGAGCGGTGATAACAAGTAAAGGGAGGACATAGAGAGACTAGGGA
TACCAGAAAGCATCAGGAACTACAACATAGAAAAGATAGCGATCTAATGA
GGATCAAGGGAAGTTACCAACGATGTGAAGAGAAGGAATAGAGAGCGGAA
GGAGTAGAGGAAGGAGGAGTGAAGGTATACGTATAAAGCAGGGATAGGGT
TAACAACAGCGCTGTCTAGAACGAAACGACGCCGCAAGGCTGAACCATAG
AAAGCAGTGTAGAGGAGGTATACGCTACAGGACATACGCGTTCAGCTAGA
TGATAGGCTAGAGTGTGTAGGCCAGAAAGTGTACTAAAAAAATCATTGCG
GTAAAGCAGTTACAGCAGCCGCCTAAGAATGTCGAAATGTACAGCCAGCC
ACCCCTTTTCTTAAAGCGTGTTTTCTAATATAGTAAGGGGAAACCGCTGC
TCAGAAGGTGATGAAGACTTTCACAGATGTAGCCAGCATATCAAATAGTT
TTTCCCACACTTGAGGAATAGCGGGAGGGACAACGTGGGAGAAAACAGAT
TTTTAAAAATGAGCAATACCTTTGCTACCCCTCATTGGTTGATTGGTTGG
GGATCCAAGAGGGTTGAATGGTGTGTTTGGAGGAAAATGTGTTTGGGAAG
CTCAAATTACTCCGTTCAATTTTTGACGAATTGTTTTTGTCTTGGTTACT
GTACTGAAATTTGCTGCTCCTCAGCTGAATTTCGTCAATATAAACGTGTA
GAACATCTCACGGGCGTTTTGGCATACGCGTCTGAAGTGACATATGTAAA
AAAATTAAAAGATTATATGCATCCA
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protein sequence of NO05G01290.1

>NO05G01290.1-protein ID=NO05G01290.1-protein|Name=NO05G01290.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1049bp
MLNITIKTLQLGDFHLQVPAESSVQALKVQVKEQTQIPEDRQRLIYRGRV
LQDGEALQTYKVEPGHTIHCVARPDVMPPSSASAYAPQPLGGPGGGILGA
ASAGAYQRLLMGGSRGFPRPGGGEGGGPGGSYAAGMAAAAAGLVGSGGPP
GAGEVPLDPRSLEHVRQGLLTMQSLLAGMEDPARGRNSRSSTSSTSSSRG
RGMDEEGMRTRSFSAAVAADGQFVDVKDTVHQWLEAQILSVDPCERTCRV
TYLGWPSRWDETISWSSPRIAPFRTRTTHTMQAPYLSPSPVSASRLQMPV
TGRDDVRRVLPEVLLMFRQLERVFVPLVEEVEEVLVREGLREGEEKEEED
KKEEGGEGGRRLRQNRRRREQQGEKGQQEQQDRAAAAAAAAAAAVLARDA
APLLDRFGRLLADLAPHVAALGALDAATSAVDAYPFGIAAGAGGRSRMGM
APSSAMSASSLRQEAAAGMRSMSSSTSSTSSNACVPAGDGENYEGRESRA
TGRWMQVGGEGGKGGVGGGRAEVRRGRRARGQGRKGGGEEGPMSMEEDEE
GGKSGNDAADGGGGAAAGPPPSLALVPRLRSRSPVEHGRFQPQASVISNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNSSSSSSSSSDSNDAGGGGGGG
GEGRGGEGGRVGGGPIEGRRVRSRLGLDSSSNSNSNNSNSVTTSRTATTT
HRNGSDTSSSYSSSIRNGSGSRTSNSRSNRGLGSSSSRSSSSSSSRSSSR
NSNGNRAPHLRSQARERSPSPETAFRRLIATEGAAARSAAVAAASAAAGA
AAHGRGMVGLGEIHIHAFVTPMGTMMGGGGGGGGGYSSRSGNASSAASAG
VAGGVGGGNGMRAAAPASTVAAATAGSSIPESLLSSSSFLPSSSSLPSST
FRNTPLDGGNLNFGPPFFQRQQQQQQQQQQQQQQQQQQQQQQRDPSNIWS
PPDIGRDDSSMFNSGVIHIPSSFHSSSLHQPLSMGGSEEVGGGANGGEEL
RRDGVETDEERGREGRREREQRSEADDGGASSPLSSFLPFLRRFSRYG*
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Synonyms
Publications