jgi.p|Nanoce1779_2|390356, gene_2920 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|390356
Unique Namegene_2920
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_7:245085..247991 +

Link to JBrowse

Properties
Property NameValue
TranscriptId390442
ProteinId390356
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_7supercontigscaffold_7:245085..247991 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL092ncniL092Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G01290NO05G01290Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|390356mRNA_2920-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|390356mRNA_2920Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|390356

>mRNA_2920-protein ID=mRNA_2920-protein|Name=jgi.p|Nanoce1779_2|390356|organism=Nannochloropsis oceanica|type=polypeptide|length=615bp
MLNITIKTLQLGDFHLQVPAESSVQALKVQVKEQTQIPEDRQRLIYRGRV
LQDGEALQTYKVEPGHTIHCVARPDVMPPSSASAYAPQPLGGPGGGILGA
ASAGAYQRLLMGGSRGFPRPGRGEGGGPGGSYAAGMAAAAAGLVGSGGPP
GAGEVPLDPRSLEHVRQGLLTMQSLLAGMEDPARGRNSRSSTSSTSSSRG
RGMDEEGMRTRSFSAAVAADGRGGKSRLGNRAAAATAVRAPPMASAPAAV
EGGAVGGGDGDGGGVGDRVCWFPGQFVDVKDTVHQWLEAQILSVDPCERT
CRVTYLGWPSRWDETISWSSPRIAPFRTRTTHTMQAPYLSPSPVSASRLQ
MPVTGRDDVRRVLPEVLLMFRQLERVFVPLVEEVEEVLVREGLREGEEKE
EEDKKEEGGEGGEEGKKEEREEGGEEGSETGSLTPWAAEREREERFLQLR
QNRRRREQQGEKGQQEQQDRAAAAAAAAAAAVLARDAAPLLDRFGRLLAD
LAPHVAALGALDAATSAVDAYPFGIAAGAGGRSRMGMAPSSAMSASSLRQ
EAAAGMRSMSSSTSSTSSNACVPAGDGENYEGRESRATGRRSRRREGRSE
TRTTGTRARKEGRR*
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Synonyms
Publications