NO05G01270, NO05G01270 (gene) Nannochloropsis oceanica

Overview
NameNO05G01270
Unique NameNO05G01270
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2819
Alignment locationchr5:362267..365085 +

Link to JBrowse

Properties
Property NameValue
DescriptionArginine serine-rich splicing factor
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:362267..365085 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0003723RNA binding
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR035979RBD_domain_sf
IPR000504RRM_dom
IPR001841Znf_RING
Homology
BLAST of NO05G01270 vs. NCBI_GenBank
Match: EWM28200.1 (arginine serine-rich splicing factor [Nannochloropsis gaditana])

HSP 1 Score: 501.5 bits (1290), Expect = 4.300e-138
Identity = 320/532 (60.15%), Postives = 356/532 (66.92%), Query Frame = 0
Query:    6 GSSSTSIANPASLATATASAPSGLQALLVSSPTNQPQPRSGPPVAEDQIQNTLKCPICIDWFTDPILLDCSHSLCLDCARRLALHDGGTNTAEVTCPLCKEVTAVTGGDKAREMEDALIADALKRFDVVPPRKSRARIEDLRTCYEAFIKNGLVAIGPNDAKPTALHMWRAVVARMESQTEEALGEKRPES----------------------------PXXXXXXXXXXXXXXXXXXXXXXXXXXXDPMKQLRFKKNILLANLVAHFREQQEQRTGSPVAGITTSTRGLQEEEEAYDDDVFMEEGGEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGSRHVWVGNLPNGVKEEHLREIFKGYGGVESVRMLRRTPQSMTGFLHFKETAEAIRAKKELDGKPFVGGKLPQNAMKIQFQSRGINRPLRSIRVHNLPPKTTSADLVELFSEFGRVEVAVVNVNSNIGFLALENVEQADRAMARWHDNVWRGRHFFIDYALRENISKEDPYPRGD 510
            G+S+T+ A+PASL        S   AL     +     RS PPVAEDQI+NTLKCPICIDWF +PILLDCSHSLCLDCARRLALHD G+NTAEVTCPLCKEVTA++GGDKAREME+ALIA+ALKRFDV+PPRKSRARIEDLR CYE FIKNGLVAIGPNDAKPTALHMWRAVVARMESQT+E LGE + ES                             XXXXXXXXXXXXXXXXXXXXXXXXXXX                           + G  V G        + E+     D  +E+    XXXXXXXXXXXX                                   +GSRHV+VGNLPNGVKEEHLRE FK YGG+ESVR+LRRT Q MTGFLHFK+ AEAIRAKKELD KPFV G LP+  MKIQ+QSRG N+P RSIRVHNLP      DL ELF  FGRV + V+N NSNI FL+LE VEQA++AMARWHD  WRGRH F+DYALRE ISKEDP+ RG+
Sbjct:   19 GTSATT-AHPASLPIPPLPLSSPAAAL-----SQHAGSRSSPPVAEDQIENTLKCPICIDWFVEPILLDCSHSLCLDCARRLALHDSGSNTAEVTCPLCKEVTAISGGDKAREMEEALIAEALKRFDVIPPRKSRARIEDLRACYEGFIKNGLVAIGPNDAKPTALHMWRAVVARMESQTQETLGEAKNESSPSSSTVIETTAIHPSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHTKDGQEVEGKEEGYGSPEGEKGEAAADPSVEQXXXXXXXXXXXXXXXXSSLAPKVEQGGPGRSPGERGPSRWDAGHGKVAAGESGSRHVYVGNLPNGVKEEHLREAFKAYGGIESVRLLRRTAQCMTGFLHFKDAAEAIRAKKELDRKPFVAGHLPRQVMKIQYQSRGNNKPCRSIRVHNLPVGVRETDLSELFGAFGRVMIVVINTNSNIAFLSLETVEQAEQAMARWHDQEWRGRHLFLDYALRETISKEDPHLRGE 544          
BLAST of NO05G01270 vs. NCBI_GenBank
Match: XP_005852762.1 (arginine serine-rich splicing factor [Nannochloropsis gaditana CCMP526] >EKU23070.1 arginine serine-rich splicing factor [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 493.8 bits (1270), Expect = 8.900e-136
Identity = 318/532 (59.77%), Postives = 350/532 (65.79%), Query Frame = 0
Query:    6 GSSSTSIANPASLATATASAPSGLQALLVSSPTNQPQPRSGPPVAEDQIQNTLKCPICIDWFTDPILLDCSHSLCLDCARRLALHDGGTNTAEVTCPLCKEVTAVTGGDKAREMEDALIADALKRFDVVPPRKSRARIEDLRTCYEAFIKNGLVAIGPNDAKPTALHMWRAVVARMESQTEEALGEKRPES----------------------------PXXXXXXXXXXXXXXXXXXXXXXXXXXXDPMKQLRFKKNILLANLVAHFREQQEQRTGSPVAGITTSTRGLQEEEEAYDDDVFMEEGGEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGSRHVWVGNLPNGVKEEHLREIFKGYGGVESVRMLRRTPQSMTGFLHFKETAEAIRAKKELDGKPFVGGKLPQNAMKIQFQSRGINRPLRSIRVHNLPPKTTSADLVELFSEFGRVEVAVVNVNSNIGFLALENVEQADRAMARWHDNVWRGRHFFIDYALRENISKEDPYPRGD 510
            G+S+T+ A+PASL        S   AL     +     RS PPVAEDQI+NTLKCPICIDWF +PILLDCSHSLCLDCARRLALHD G+NTAEVTCPLCKEVTA++GGDKAREME+ALIA+ALKRFDV+PPRKSRARIEDLR CYE FIKNGLVAIGPNDAKPTALHMWRAVVARMESQT+E LGE + ES                             XXXXXXXXXXXXXXXXXXXXXXXXXXX                           + G  V G                           XXXXXXXXXXXXX                                  +GSRHV+VGNLPNGVKEEHLRE FK YGG+ESVR+LRRT Q MTGFLHFK+ AEAIRAKKELD KPFV G LP+  MKIQ+QSRG N+P RSIRVHNLP      DL ELF  FGRV + V+N NSNI FL+LE VEQA++AMARWHD  WRGRH F+DYALRE ISKEDP+ RG+
Sbjct:   19 GTSATT-AHPASLPIPPLPLSSPAAAL-----SQHAGSRSSPPVAEDQIENTLKCPICIDWFVEPILLDCSHSLCLDCARRLALHDSGSNTAEVTCPLCKEVTAISGGDKAREMEEALIAEALKRFDVIPPRKSRARIEDLRACYEGFIKNGLVAIGPNDAKPTALHMWRAVVARMESQTQETLGEAKNESSPSSSTVIETTAIHPSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHTKDGQEVEGKEEGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLAPKVEQGGPGRSPGERGPSRWDAGHGKVAAGESGSRHVYVGNLPNGVKEEHLREAFKAYGGIESVRLLRRTAQCMTGFLHFKDAAEAIRAKKELDRKPFVAGHLPRQVMKIQYQSRGNNKPCRSIRVHNLPVGVRETDLSELFGAFGRVMIVVINTNSNIAFLSLETVEQAEQAMARWHDQEWRGRHLFLDYALRETISKEDPHLRGE 544          
BLAST of NO05G01270 vs. NCBI_GenBank
Match: XP_018287932.1 (hypothetical protein PHYBLDRAFT_188184 [Phycomyces blakesleeanus NRRL 1555(-)] >OAD69892.1 hypothetical protein PHYBLDRAFT_188184 [Phycomyces blakesleeanus NRRL 1555(-)])

HSP 1 Score: 90.5 bits (223), Expect = 2.300e-14
Identity = 52/144 (36.11%), Postives = 79/144 (54.86%), Query Frame = 0
Query:  336 SRHVWVGNLPNGVKEEHLREIFKGYGGVESVRMLRRTPQSMTGFLHFKETAEAIRAKKELDGKPFVGGKLPQNAMKIQF-------QSRGINRPLRSIRVHNLPPKTTSADLVELFSEFGRVEVAVVNVNSNIGFLALENVEQA 473
            SR +W+GN+   +  E+L   F  YG +ESVR+L    +    F++F ET +AI AK E+ G+  + GK+ Q  ++I +           ++RP R++ + NLPP TTS  L +LFS FG VE   V    N  F+  E ++ A
Sbjct:  247 SRSLWIGNIDRSITTEYLTHTFIAYGPIESVRLLM---EKECAFVNFFETEDAIHAKDEVLGR--LNGKIGQCTVRIGYGRADAVSSEANVSRPTRALWLGNLPPDTTSGSLEQLFSTFGFVESVRVLSYKNCAFINFEKIDNA 385          
BLAST of NO05G01270 vs. NCBI_GenBank
Match: EPB81089.1 (hypothetical protein HMPREF1544_12216 [Mucor circinelloides f. circinelloides 1006PhL])

HSP 1 Score: 86.7 bits (213), Expect = 3.300e-13
Identity = 47/147 (31.97%), Postives = 86/147 (58.50%), Query Frame = 0
Query:  336 SRHVWVGNLPNGVKEEHLREIFKGYGGVESVRMLRRTPQSMTGFLHFKETAEAIRAKKELDGKPFVGGKLPQNAMKIQF-------QSRGINRPLRSIRVHNLPPKTTSADLVELFSEFGRVEVAVVNVNSNIGFLALENVEQADRA 476
            +R +WVGN+ + V  + L ++F  +G +ESVR+L    +   GF++F +T +A+RAK+E+ G+  +GG++ Q  ++I +           + +P R++ + N+P  TT   L  +F+ FG++E   V  + N GF+  E+V  A +A
Sbjct:  354 TRSLWVGNIDHTVTIDLLTQVFSNFGAIESVRLL---VEKECGFVNFFQTEDAVRAKEEVLGR--MGGRIGQCIVRIGYGKADAAVTETNVLQPTRALWLGNIPGNTTPTSLQSIFAVFGQIESVRVLSHKNCGFINFESVNSAVKA 495          
BLAST of NO05G01270 vs. NCBI_GenBank
Match: EIE81332.1 (hypothetical protein RO3G_06037 [Rhizopus delemar RA 99-880])

HSP 1 Score: 85.5 bits (210), Expect = 7.300e-13
Identity = 59/179 (32.96%), Postives = 94/179 (52.51%), Query Frame = 0
Query:  336 SRHVWVGNLPNGVKEEHLREIFKGYGGVESVRMLRRTPQSMTGFLHFKETAEAIRAKKELDGKPFVGGKLPQNAMKIQF-------QSRGINRPLRSIRVHNLPPKTTSADLVELFSEFGRVEVAVVNVNSNIGFLALENVEQADRAMARWHDNVWRGRHFFIDY-ALRENISKEDPYP 507
            SR +WVGN+ +GV  E L ++F  +G +ESVR+L    +    F++F    +AIRAK+  D    +GG++    ++I F           +++P R++ + N+P  TT A L  +FS FG +E   V  + N GF+   N E AD A+A   D + + + F   + A R   +K  P P
Sbjct:  310 SRSLWVGNIDSGVTIEMLTQVFSMFGPIESVRLLL---EKECAFINFFHVEDAIRAKE--DVLTHMGGRIGNCIVRIGFGKADAVVTETNVSQPTRALWLGNIPGNTTPASLQSIFSTFGTIESVRVLSHKNCGFI---NFESADDAVAA-RDALLQNKIFAPGFSAARVGFAKIPPTP 479          
BLAST of NO05G01270 vs. NCBI_GenBank
Match: OBZ85194.1 (Pumilio domain-containing protein C56F2.08c [Choanephora cucurbitarum])

HSP 1 Score: 85.1 bits (209), Expect = 9.600e-13
Identity = 49/147 (33.33%), Postives = 83/147 (56.46%), Query Frame = 0
Query:  336 SRHVWVGNLPNGVKEEHLREIFKGYGGVESVRMLRRTPQSMTGFLHFKETAEAIRAKKELDGKPFVGGKLPQNAMKIQF-------QSRGINRPLRSIRVHNLPPKTTSADLVELFSEFGRVEVAVVNVNSNIGFLALENVEQADRA 476
            SR +WVGN+   +  + L ++F  +G +ESVR+L    +   GF++F +  +AIRAK+E+ G   +GG++    ++I F           + +P R++ + N+P  TT   L ++FSE+G +E   V  + N GF+  E VE A +A
Sbjct:  340 SRSLWVGNIDQTITIDLLTQVFSAFGPIESVRLL---VEKECGFVNFFQVEDAIRAKEEILG--HMGGRIGHCIVRIGFGKADAAVTETTVLQPTRALWLGNIPGNTTPTCLQDVFSEYGTIESVRVLSHKNCGFINFETVESAIKA 481          
BLAST of NO05G01270 vs. NCBI_GenBank
Match: CEP14734.1 (hypothetical protein [Parasitella parasitica])

HSP 1 Score: 84.3 bits (207), Expect = 1.600e-12
Identity = 47/146 (32.19%), Postives = 83/146 (56.85%), Query Frame = 0
Query:  337 RHVWVGNLPNGVKEEHLREIFKGYGGVESVRMLRRTPQSMTGFLHFKETAEAIRAKKELDGKPFVGGKLPQNAMKIQF-------QSRGINRPLRSIRVHNLPPKTTSADLVELFSEFGRVEVAVVNVNSNIGFLALENVEQADRA 476
            R +WVGN+ N +  + L ++F  +G +ESVR+L    +   GF++F +  +AIRAK+E+ G+  +GG++ Q  ++I +           + +P R++ + N+P  TT   L  +F+ FG +E   V  + N GF+  E+V  A +A
Sbjct:  334 RSLWVGNIDNTITIDLLTQVFSNFGAIESVRLL---VEKECGFVNFFQIEDAIRAKEEVLGR--MGGRIGQCIVRIGYGKADAAVTETNVLQPTRALWLGNIPGNTTPTSLQGIFAVFGEIESVRVLSHKNCGFINFESVSSAVKA 474          
BLAST of NO05G01270 vs. NCBI_GenBank
Match: GAN00707.1 (hypothetical protein MAM1_0001c00129 [Mucor ambiguus])

HSP 1 Score: 82.8 bits (203), Expect = 4.800e-12
Identity = 46/146 (31.51%), Postives = 83/146 (56.85%), Query Frame = 0
Query:  337 RHVWVGNLPNGVKEEHLREIFKGYGGVESVRMLRRTPQSMTGFLHFKETAEAIRAKKELDGKPFVGGKLPQNAMKIQF-------QSRGINRPLRSIRVHNLPPKTTSADLVELFSEFGRVEVAVVNVNSNIGFLALENVEQADRA 476
            R +WVGN+ + V  + L ++F  +G +ESVR+L    +   GF++F +  +A+RAK E+ G+  +GG++ Q  ++I +           + +P R++ + N+P  TT   L  +F+ FG++E   V  + N GF+  E+V  A +A
Sbjct:  360 RSLWVGNIDHTVTIDILTQVFSNFGAIESVRLL---VEKECGFVNFFQIEDAVRAKDEVLGR--MGGRIGQCIVRIGYGKADAAVTETNVLQPTRALWLGNIPGNTTPTSLQSIFAVFGQIESVRVLSHKNCGFINFESVNSAVKA 500          
BLAST of NO05G01270 vs. NCBI_GenBank
Match: OAD07165.1 (hypothetical protein MUCCIDRAFT_77839 [Mucor circinelloides f. lusitanicus CBS 277.49])

HSP 1 Score: 82.8 bits (203), Expect = 4.800e-12
Identity = 47/146 (32.19%), Postives = 83/146 (56.85%), Query Frame = 0
Query:  337 RHVWVGNLPNGVKEEHLREIFKGYGGVESVRMLRRTPQSMTGFLHFKETAEAIRAKKELDGKPFVGGKLPQNAMKIQF-------QSRGINRPLRSIRVHNLPPKTTSADLVELFSEFGRVEVAVVNVNSNIGFLALENVEQADRA 476
            R +WVGN+   V  + L ++F  +G +ESVR+L    +   GF++F +  +AIRAK+E+ G+  +GG++ Q  ++I +           + +P R++ + N+P  TT   L  +F+ FG++E   V  + N GF+  E+V  A +A
Sbjct:  358 RSLWVGNIDPTVTIDLLTQVFSNFGAIESVRLL---VEKECGFVNFFQIEDAIRAKEEVLGR--MGGRIGQCIVRIGYGKADAAVTETNVLQPTRALWLGNIPGNTTPTSLQSIFAVFGQIESVRVLSHKNCGFINFESVNSAVKA 498          
BLAST of NO05G01270 vs. NCBI_GenBank
Match: CEG66422.1 (hypothetical protein RMATCC62417_03009 [Rhizopus microsporus])

HSP 1 Score: 82.4 bits (202), Expect = 6.200e-12
Identity = 47/144 (32.64%), Postives = 77/144 (53.47%), Query Frame = 0
Query:  336 SRHVWVGNLPNGVKEEHLREIFKGYGGVESVRMLRRTPQSMTGFLHFKETAEAIRAKKELDGKPFVGGKLPQNAMKIQF-------QSRGINRPLRSIRVHNLPPKTTSADLVELFSEFGRVEVAVVNVNSNIGFLALENVEQA 473
            SR +WVGN+ N +  E L ++F  +G +ESVR+L    +    F++F    +A+RAK+  D    +GG++    ++I F           +++P R++ + N+P  TT A L  +F  FG +E   V  + N GF+  E VE A
Sbjct:  365 SRSLWVGNIDNSITIETLTQVFSMFGPIESVRLLL---EKECAFINFFHVEDAVRAKE--DVLTHMGGRIGNCIVRIGFGKADAAVTETNVSQPTRALWLGNIPGNTTPASLQSIFGTFGTIESVRVLSHKNCGFINFETVEDA 503          
The following BLAST results are available for this feature:
BLAST of NO05G01270 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28200.14.300e-13860.15arginine serine-rich splicing factor [Nannochlorop... [more]
XP_005852762.18.900e-13659.77arginine serine-rich splicing factor [Nannochlorop... [more]
XP_018287932.12.300e-1436.11hypothetical protein PHYBLDRAFT_188184 [Phycomyces... [more]
EPB81089.13.300e-1331.97hypothetical protein HMPREF1544_12216 [Mucor circi... [more]
EIE81332.17.300e-1332.96hypothetical protein RO3G_06037 [Rhizopus delemar ... [more]
OBZ85194.19.600e-1333.33Pumilio domain-containing protein C56F2.08c [Choan... [more]
CEP14734.11.600e-1232.19hypothetical protein [Parasitella parasitica][more]
GAN00707.14.800e-1231.51hypothetical protein MAM1_0001c00129 [Mucor ambigu... [more]
OAD07165.14.800e-1232.19hypothetical protein MUCCIDRAFT_77839 [Mucor circi... [more]
CEG66422.16.200e-1232.64hypothetical protein RMATCC62417_03009 [Rhizopus m... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL087nonsL087Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL086nonsL086Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR118ngnoR118Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003743NSK003743Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G01270.1NO05G01270.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|669758gene_2919Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100004g51gene2311Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G01270.1NO05G01270.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G01270 ID=NO05G01270|Name=NO05G01270|organism=Nannochloropsis oceanica|type=gene|length=2819bp
ATGGCTTCATCCGTGGGCAGCAGCAGCACCAGCATCGCGAACCCCGCCTC
CCTCGCGACAGCTACTGCCTCGGCTCCTTCCGGCCTCCAGGCTCTCCTCG
TTTCCTCGCCCACCAACCAACCACAGCCCCGGAGCGGCCCTCCCGTAGCG
GAGGACCAGATTCAAAACACACTCAAGTGTCCTATATGCATCGATTGGTT
TACCGACCCCATCCTCCTTGACTGCAGCCATTCCCTCTGTCTGGACTGTG
CGCGCCGCCTGGCCCTCCATGATGGCGGGACAAACACCGCCGAGGTGACG
TGTCCGTTGTGCAAGGAAGTGACGGCGGTGACGGGTGGGGATAAGGCGCG
AGAAATGGAGGATGCACTGATCGCTGACGCGCTAAAGCGGTTCGACGTTG
TCCCTCCCAGGAAGAGCCGTGCCCGCATTGAAGACCTGCGAACCTGCTAC
GAGGCCTTTATCAAGAACGGCCTCGTAGCCATCGGTCCCAACGATGCTAA
gtgagtttgacattctttaaatgtgcttgtttgtcggcacggccttacaa
gcccgtcgggtggaatgctcttgagtgggctgttctcccttcccacctcg
cttgtctctctccaagaggtcttggtcagcttggctagcagtgtttatgt
actgtcccctaatgccttgtccgtccctcctttctgtcttcgtctcagcc
ttcgccctccctcttacacatttaatcaccctcccccattttctctcttc
ctcactccccacccctccgccacctacgtaccctcagGCCCACGGCCTTA
CACATGTGGCGCGCCGTCGTTGCGCGCATGGAAAGCCAAACCGAAGAGGC
CCTTGGCGAGAAGAGACCCGAGTCTCCCTCCGCATCCAGAAACGCTGCCG
ACGCCACCAGCAGTATGTCTGCGGGGGAGGATGGGGAGGAAGGGAGGGAG
GGCATGGACGACCCGATGAAGCAGCTCCGATTTAAGAAGAACATTTTGCT
TGCGAACCTTGTCGCGCATTTTAGAGAGCAGCAAGAGCAGCGTACCGGCA
GTCCAGTTGCAGGTATTACCACATCTACGAGGGGCCTCCAGGAAGAGGAA
GAGGCCTACGACGACGACGTGTTCATGGAAGAGGGAGGGGAGGGATCGGA
GGACGGGGAGGTGACAGAAGATGGGAAGGGACATGGTTCTGCACCCGTCA
AGGAAGGAGGCGGAGAGGATGGAGGGTCAGGCAACAAGCGGGGGTCTCGA
TGGGGTGGTATGAGTGGGAAAAGCGAGGCGGCTGCGGCGGGCTCACGGCA
CGTTTGGGTGGGTAATTTGCCCAACGGCGTAAAGGAGGAGCATTTGCGGG
AGATTTTCAAGGGCTACGGTGGGGTGGAGTCTGTGAGGATGCTGCGACGG
ACCCCGCAGTCCATGACGGGCTTCTTGCATTTCAAGGAGACGGCAGAGGC
AATTCGCGCCAAAAAGGAATTGGACGGGAAACCCTTTGTCGGAGGAAAGC
TCCCACAGAACGCGATGAAGATCCAGTTCCAATCTAGAGGGATAAATCGC
CCGTTGCGGAGCATTCGCGTCCACAATTTGCCACCTAAGACGACCTCAGC
GGACTTGGTGGAGCTTTTTAGTGAGTTCGGGCGGGTGGAGGTGGCGGTGG
TCAATGTGAATTCCAATATTGGCTTTTTGGCGTTGGAGAACGTTGAGCAA
GCCGACCGAGCCATGGCCCGATGGCACGACAATGTGTGGCGGGGTAGGCA
CTTTTTTATTGATTATGCCTTGCGGGAAAATATCTCCAAGGAGGATCCTT
ATCCGCGGGGGGACCGAGATCGACTCGAGAGGGAGAGAGAGCGAAGTGCA
GGGGGGGGGGGAGAGGAGGAGGAGGAGGGGGAGGTCGTGAACGTGAGAGG
GAGAGGGAAAAGGAAAGAGAAAGGGAGAGGGAAAGGGAGCGAGAGCGGTC
GCGTGACCGAGgtagggagcgcgagcgagaacggtcgatggaggggattc
gggaggggagaggagggccgccgcggccgtcacggtatgatgacagagac
agggaccgcatgcgtggcccccctctgccttttccacaagatatgccaca
tattcccaaccgcttgcttgtgctcccctcggcaaggggctgtcccccct
ttgaggtgtacgcggaagacttggagaagctgcgagagttggttgatttg
atgcaaagccacctcgcgccccaccaacgacaaaccctggaagatgccct
tcaaaaccgcgcactatacgaaggtatcacgcaactcatcggtcgcaacc
gtcgggacatgggtgctgtcctccgtgaccttcgcctagAGCTCGGCTTG
CCCCCCTCCGATCATCGGCGTGGCCCACCCTTACCACCATTACACCATCA
CCAACCTCCGCACACTTCTTTCCGTGATCATCCCATCCCTTCCCACCCTC
GCGACCGTGCCGCATCCATGCCTCTTCCTCCCCCTTTTCGGGATGGCCCA
TTTGGACCAGGGGGCGACCGAGGGCGAGATCTTCACCAAGACCGAGAGCG
CATGCGATATCATTCTCCTCCTCCCTCCGATTACCGTCGCTTTCCTCCTC
CAGGCCACCCTGACCACCATCTCCACCATTCCATTCCCCCTCCGCATCAC
TACGATCGCTCTTCTCCCCATGGTGGCTATCGAGATGACCCGCGGCTTTA
TTCCCCGGACCGACGTGGGGGGGAGCATCTGCCGCCTATCCCTCCGCCAG
GTTACCGCGACGACCGCCGCGGCCCTCCATCAGCTCTTCATCCCTCCTCC
TTGGGACCCCCTCCAATAG
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protein sequence of NO05G01270.1

>NO05G01270.1-protein ID=NO05G01270.1-protein|Name=NO05G01270.1|organism=Nannochloropsis oceanica|type=polypeptide|length=718bp
MASSVGSSSTSIANPASLATATASAPSGLQALLVSSPTNQPQPRSGPPVA
EDQIQNTLKCPICIDWFTDPILLDCSHSLCLDCARRLALHDGGTNTAEVT
CPLCKEVTAVTGGDKAREMEDALIADALKRFDVVPPRKSRARIEDLRTCY
EAFIKNGLVAIGPNDAKPTALHMWRAVVARMESQTEEALGEKRPESPSAS
RNAADATSSMSAGEDGEEGREGMDDPMKQLRFKKNILLANLVAHFREQQE
QRTGSPVAGITTSTRGLQEEEEAYDDDVFMEEGGEGSEDGEVTEDGKGHG
SAPVKEGGGEDGGSGNKRGSRWGGMSGKSEAAAAGSRHVWVGNLPNGVKE
EHLREIFKGYGGVESVRMLRRTPQSMTGFLHFKETAEAIRAKKELDGKPF
VGGKLPQNAMKIQFQSRGINRPLRSIRVHNLPPKTTSADLVELFSEFGRV
EVAVVNVNSNIGFLALENVEQADRAMARWHDNVWRGRHFFIDYALRENIS
KEDPYPRGDRDRLERERERSAGGGGEEEEEGEVVNVRGRGKRKEKGRGKG
SESGRVTESSACPPPIIGVAHPYHHYTITNLRTLLSVIIPSLPTLATVPH
PCLFLPLFGMAHLDQGATEGEIFTKTESACDIILLLPPITVAFLLQATLT
TISTIPFPLRITTIALLPMVAIEMTRGFIPRTDVGGSICRLSLRQVTATT
AAALHQLFIPPPWDPLQ*
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Synonyms
Publications