NO05G00910, NO05G00910 (gene) Nannochloropsis oceanica

Overview
NameNO05G00910
Unique NameNO05G00910
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2875
Alignment locationchr5:280057..282931 +

Link to JBrowse

Properties
Property NameValue
DescriptionArgininosuccinate synthetase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:280057..282931 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004055argininosuccinate synthase activity
GO:0005524ATP binding
GO:0003824catalytic activity
GO:0000166nucleotide binding
Vocabulary: Biological Process
TermDefinition
GO:0006526arginine biosynthetic process
GO:0009987cellular process
GO:0009058biosynthetic process
Vocabulary: INTERPRO
TermDefinition
IPR001518Arginosuc_synth
Homology
BLAST of NO05G00910 vs. NCBI_GenBank
Match: XP_005853695.1 (argininosuccinate synthetase [Nannochloropsis gaditana CCMP526] >EKU22666.1 argininosuccinate synthetase [Nannochloropsis gaditana CCMP526] >EWM28271.1 argininosuccinate synthase [Nannochloropsis gaditana])

HSP 1 Score: 737.6 bits (1903), Expect = 2.100e-209
Identity = 356/383 (92.95%), Postives = 371/383 (96.87%), Query Frame = 0
Query:   16 MAEKPKCVLAYSGGLDTSVILVWLIEKGFDVICYCANVGQYKEDFEKVREKAMKCGASKVYIEDLREEFVKEYVFWAVKANAQYEGRYLLGTSLARPVIAKRQVEIAQKEGAKWLSHGATGKGNDQVRFELCALALDATIQTLAPWREKEFIEQFKGRQDLLDYAAAHNIQVEATKKAPYSVDENLYHTSYESGMLEDPMVPPLKEMFKMTVDPEDAPDKSEKIRIDFQAGVPVKVTNHDDGTVKTDALELFLYLNDLAGKHGVGRIDIVENRFVGIKSRGVYETPGGQILREAHMDLEGLCIDREVLRLKEGHQLEFSRLCYNGFWFAPEMELTMAAIDWTQKHVTGGVELSLYKGNVTVLGRESPFSLYSADLASMDIEGG 399
            MA KPKCVLAYSGGLDTSVILVWLIEKGFDVICYCANVGQ KEDF+KVREKA+KCGASKVYIEDLREEFVK+YVFWAVKANAQYEGRYLLGTSLARPVIAKRQVEIAQKEGAKWLSHGATGKGNDQVRFELCA ALDA IQTLAPWRE EFIE+FKGRQDLLDYAAAHNIQVEATKKA YSVDENLYHTSYESGMLEDPMVPPLKEMFKMTVDPEDAPDK+EK+RIDF+ GVPVKVTNHDDGTVKT+ LELFLYLN+LAGKHGVGRIDIVENRFVGIKSRGVYETPGGQILR AHMDLEGLC+DREVLRLKEGHQLEFSRLCYNGFWFAPEMELT A+ID+TQ+ V GGVELSLYKGNVTVLGRESP+SLYSADLASM+IEGG
Sbjct:    1 MAGKPKCVLAYSGGLDTSVILVWLIEKGFDVICYCANVGQLKEDFDKVREKALKCGASKVYIEDLREEFVKDYVFWAVKANAQYEGRYLLGTSLARPVIAKRQVEIAQKEGAKWLSHGATGKGNDQVRFELCAQALDAAIQTLAPWRETEFIERFKGRQDLLDYAAAHNIQVEATKKASYSVDENLYHTSYESGMLEDPMVPPLKEMFKMTVDPEDAPDKAEKVRIDFEEGVPVKVTNHDDGTVKTEPLELFLYLNELAGKHGVGRIDIVENRFVGIKSRGVYETPGGQILRVAHMDLEGLCVDREVLRLKEGHQLEFSRLCYNGFWFAPEMELTKASIDFTQRRVAGGVELSLYKGNVTVLGRESPYSLYSADLASMEIEGG 383          
BLAST of NO05G00910 vs. NCBI_GenBank
Match: GAX98959.1 (argininosuccinate synthase [Pythium insidiosum])

HSP 1 Score: 575.9 bits (1483), Expect = 1.000e-160
Identity = 279/379 (73.61%), Postives = 324/379 (85.49%), Query Frame = 0
Query:   21 KCVLAYSGGLDTSVILVWLIEKGFDVICYCANVGQYKEDFEKVREKAMKCGASKVYIEDLREEFVKEYVFWAVKANAQYEGRYLLGTSLARPVIAKRQVEIAQKEGAKWLSHGATGKGNDQVRFELCALALDATIQTLAPWREKEFIEQFKGRQDLLDYAAAHNIQVEATKKAPYSVDENLYHTSYESGMLEDPMVPPLKEMFKMTVDPEDAPDKSEKIRIDFQAGVPVKVTNHDDGTVK-TDALELFLYLNDLAGKHGVGRIDIVENRFVGIKSRGVYETPGGQILREAHMDLEGLCIDREVLRLKEGHQLEFSRLCYNGFWFAPEMELTMAAIDWTQKHVTGGVELSLYKGNVTVLGRESPFSLYSADLASMDIEGG 399
            K VLAYSGGLDTSVIL WL+ KGF+VICYCANVGQ+ E+++KV+EKA+  GA KVYIEDLREEFV+ Y+F AVKANA YE RYLLGTSLARPVIAK+QVEIAQ EGA+++SHGATGKGNDQVRFELCA ALDA ++T+APWR+ EFI+QFKGR DLL YAA  NI V+AT KAPYSVDENLYHTSYE+GMLEDPM  P+KEMFKMTVDP+DAP+  E+I I F+ GVPV V N    T   T AL+LFL LN LAGKHG+GRIDIVENRFVGIKSRGVYETPGG ILREAH+DLEGLC+DREV++L++G   +F+  CYNGFWFAPEME    AI+++Q+++TG V L LYKGNVTV+GR+S F+LYSADLASMD EGG
Sbjct:   57 KVVLAYSGGLDTSVILKWLVNKGFEVICYCANVGQHGENYDKVKEKALALGAKKVYIEDLREEFVQGYIFEAVKANAIYESRYLLGTSLARPVIAKKQVEIAQAEGAQYVSHGATGKGNDQVRFELCAQALDARLKTIAPWRDAEFIKQFKGRPDLLKYAAEQNIPVDATPKAPYSVDENLYHTSYEAGMLEDPMTAPMKEMFKMTVDPKDAPNTPEQISITFEKGVPVSVKNLTANTAPVTGALDLFLELNKLAGKHGIGRIDIVENRFVGIKSRGVYETPGGTILREAHLDLEGLCMDREVMKLRDGLSAKFAEFCYNGFWFAPEMEFVRNAINFSQQNITGEVHLELYKGNVTVIGRKSDFALYSADLASMDQEGG 435          
BLAST of NO05G00910 vs. NCBI_GenBank
Match: CBN78379.1 (argininosuccinate synthetase [Ectocarpus siliculosus])

HSP 1 Score: 567.8 bits (1462), Expect = 2.800e-158
Identity = 273/378 (72.22%), Postives = 318/378 (84.13%), Query Frame = 0
Query:   21 KCVLAYSGGLDTSVILVWLIEKGFDVICYCANVGQYKEDFEKVREKAMKCGASKVYIEDLREEFVKEYVFWAVKANAQYEGRYLLGTSLARPVIAKRQVEIAQKEGAKWLSHGATGKGNDQVRFELCALALDATIQTLAPWREKEFIEQFKGRQDLLDYAAAHNIQVEATKKAPYSVDENLYHTSYESGMLEDPMVPPLKEMFKMTVDPEDAPDKSEKIRIDFQAGVPVKVTNHDDGTVKTDALELFLYLNDLAGKHGVGRIDIVENRFVGIKSRGVYETPGGQILREAHMDLEGLCIDREVLRLKEGHQLEFSRLCYNGFWFAPEMELTMAAIDWTQKHVTGGVELSLYKGNVTVLGRESPFSLYSADLASMDIEGG 399
            K VLAYSGGLDTSVIL WL  +GF+VICYCANVGQ  ED++ + +KA  CGASKVYIEDL EEFV ++VF AVKANAQYEGRYLLGTSLARPVIAKRQVEIAQKEGAK++SHGATGKGNDQVRFE+CA ALD+ I T+APWR+ EF+E+FKGR DLL YA    I V +T KA YS+DENLYHTSYESG+LEDPM  P  EMFKMTVDP  APDK E +RI+F  G+PVKVTN  DGTVK   LELF YLN++AG++G+GRIDIVENRFVGIKSRG+YETP G +LRE H+DLEGLC+D+EV+R+++    EF+RLCYNGFW+APEMEL   AID++Q+ V G VE++LYKGN+TV GRES  SLYSADLASM+IE G
Sbjct:   17 KVVLAYSGGLDTSVILKWLSGQGFEVICYCANVGQQGEDYDAITKKAKDCGASKVYIEDLCEEFVTDFVFEAVKANAQYEGRYLLGTSLARPVIAKRQVEIAQKEGAKYVSHGATGKGNDQVRFEMCAQALDSKITTIAPWRDAEFLEKFKGRGDLLAYATEQGIPVSSTPKASYSIDENLYHTSYESGILEDPMTAPPPEMFKMTVDPLKAPDKVESLRIEFAKGIPVKVTNKTDGTVKEKPLELFCYLNEVAGRNGIGRIDIVENRFVGIKSRGIYETPAGTLLREVHLDLEGLCLDKEVVRIRDQLSEEFARLCYNGFWYAPEMELVKHAIDFSQRDVEGAVEVALYKGNMTVTGRESAKSLYSADLASMEIENG 394          
BLAST of NO05G00910 vs. NCBI_GenBank
Match: XP_002999029.1 (argininosuccinate synthase [Phytophthora infestans T30-4] >EEY69175.1 argininosuccinate synthase [Phytophthora infestans T30-4])

HSP 1 Score: 565.8 bits (1457), Expect = 1.100e-157
Identity = 272/379 (71.77%), Postives = 319/379 (84.17%), Query Frame = 0
Query:   21 KCVLAYSGGLDTSVILVWLIEKGFDVICYCANVGQYKEDFEKVREKAMKCGASKVYIEDLREEFVKEYVFWAVKANAQYEGRYLLGTSLARPVIAKRQVEIAQKEGAKWLSHGATGKGNDQVRFELCALALDATIQTLAPWREKEFIEQFKGRQDLLDYAAAHNIQVEATKKAPYSVDENLYHTSYESGMLEDPMVPPLKEMFKMTVDPEDAPDKSEKIRIDFQAGVPVKVTNHDDGTVK-TDALELFLYLNDLAGKHGVGRIDIVENRFVGIKSRGVYETPGGQILREAHMDLEGLCIDREVLRLKEGHQLEFSRLCYNGFWFAPEMELTMAAIDWTQKHVTGGVELSLYKGNVTVLGRESPFSLYSADLASMDIEGG 399
            K VLAYSGGLDTS+IL WL  KGF+VICYCANVGQ+ ED+EKVR KAM  GA KVYIEDLREEFVK Y+F AVK+NA YE RYLLGTSLARPVIAK+QVEIAQ EGAK+++HGATGKGNDQVRFELCA ALDA ++T+APWR+ EFIE+FKGR DL+ YA   NI ++AT KAPYSVDENLYHTSYE+GMLEDPM  P+ EMFKMTVDP+DAPD +E+I++ F+ G+PV VTN    T + T ALELFL LN LAGKHG+GRIDIVENRFVGIKSRG YETPGG ILR AH+DLEGLC+DREV+++++    +F+  CYNGFWFAPEM+    A+D++Q+++TG V L LYKGNVTV+GR S  +LYSADLASMD EGG
Sbjct:   48 KVVLAYSGGLDTSIILKWLTNKGFEVICYCANVGQHGEDYEKVRAKAMSLGAKKVYIEDLREEFVKHYIFEAVKSNAIYESRYLLGTSLARPVIAKKQVEIAQAEGAKYVAHGATGKGNDQVRFELCAQALDAQLKTIAPWRDAEFIEKFKGRADLIQYAKEQNIPIDATPKAPYSVDENLYHTSYEAGMLEDPMTAPMVEMFKMTVDPKDAPDAAEQIQVRFEKGIPVGVTNLTAKTPELTGALELFLELNKLAGKHGIGRIDIVENRFVGIKSRGCYETPGGTILRHAHLDLEGLCMDREVMKVRDSLSAKFAEFCYNGFWFAPEMDFVRNAVDFSQQNITGFVNLELYKGNVTVIGRYSDEALYSADLASMDQEGG 426          
BLAST of NO05G00910 vs. NCBI_GenBank
Match: XP_012196551.1 (argininosuccinate synthase [Saprolegnia parasitica CBS 223.65] >KDO32901.1 argininosuccinate synthase [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 564.7 bits (1454), Expect = 2.400e-157
Identity = 274/380 (72.11%), Postives = 320/380 (84.21%), Query Frame = 0
Query:   21 KCVLAYSGGLDTSVILVWLIEKGFDVICYCANVGQYKEDFEKVREKAMKCGASKVYIEDLREEFVKEYVFWAVKANAQYEGRYLLGTSLARPVIAKRQVEIAQKEGAKWLSHGATGKGNDQVRFELCALALDATIQTLAPWREKEFIEQFKGRQDLLDYAAAHNIQVEATKKAPYSVDENLYHTSYESGMLEDPMVPPLKEMFKMTVDPEDAPDKSEKIRIDFQAGVPVKVTN--HDDGTVKTDALELFLYLNDLAGKHGVGRIDIVENRFVGIKSRGVYETPGGQILREAHMDLEGLCIDREVLRLKEGHQLEFSRLCYNGFWFAPEMELTMAAIDWTQKHVTGGVELSLYKGNVTVLGRESPFSLYSADLASMDIEGG 399
            K VLAYSGGLDTS+IL WL+ KGF V+CYCANVGQ+ E+FEKV+ KAM  GA+KVYIEDLR+EFV +Y++ AV+ANA YE RYLLGTSLARPVIAK+ VEIA+KEG K+++HGATGKGNDQVRFELCA AL+A+++T+APWR+ EFIE FKGRQDLL YA AHNI V+AT KAPYSVDENLYHTSYESGMLEDPM  PL EMFKMTVDP+ APD +EKIRI F+ GVPVKV N       V TD LELFL LN L GKHGVGRIDIVENRFVGIKSRGVYETPGG ILR+AH+DLEGLC+DREV++L++   ++F+  CYNGFWFAPEM+    AI ++QK + G V++ LYKGNVT+ GR S  +LYSADLASMD+EGG
Sbjct:   10 KVVLAYSGGLDTSIILKWLVNKGFQVVCYCANVGQFGENFEKVQAKAMALGAAKVYIEDLRKEFVVDYLWPAVQANAIYESRYLLGTSLARPVIAKKMVEIAEKEGCKYVAHGATGKGNDQVRFELCAQALNASLKTIAPWRDPEFIEAFKGRQDLLAYAKAHNIPVDATPKAPYSVDENLYHTSYESGMLEDPMTGPLPEMFKMTVDPKVAPDAAEKIRITFENGVPVKVANLTTPSSPVLTDPLELFLELNRLGGKHGVGRIDIVENRFVGIKSRGVYETPGGTILRDAHLDLEGLCMDREVMKLRDALSVKFAEFCYNGFWFAPEMDFVRHAIAFSQKAIAGHVDVELYKGNVTITGRYSDVALYSADLASMDMEGG 389          
BLAST of NO05G00910 vs. NCBI_GenBank
Match: XP_008891931.1 (argininosuccinate synthase [Phytophthora parasitica INRA-310] >XP_008916375.1 argininosuccinate synthase [Phytophthora parasitica INRA-310] >ETI49880.1 argininosuccinate synthase [Phytophthora parasitica P1569] >ETK89748.1 argininosuccinate synthase [Phytophthora parasitica] >ETL43158.1 argininosuccinate synthase [Phytophthora parasitica] >ETL96341.1 argininosuccinate synthase [Phytophthora parasitica] >ETM49506.1 argininosuccinate synthase [Phytophthora parasitica] >ETM98323.1 argininosuccinate synthase [Phytophthora parasitica INRA-310] >ETN22699.1 argininosuccinate synthase [Phytophthora parasitica INRA-310] >ETO78600.1 argininosuccinate synthase [Phytophthora parasitica P1976] >ETP19646.1 argininosuccinate synthase [Phytophthora parasitica CJ01A1] >ETP47584.1 argininosuccinate synthase [Phytophthora parasitica P10297] >KUF79336.1 Argininosuccinate synthase [Phytophthora nicotianae])

HSP 1 Score: 563.9 bits (1452), Expect = 4.100e-157
Identity = 270/379 (71.24%), Postives = 319/379 (84.17%), Query Frame = 0
Query:   21 KCVLAYSGGLDTSVILVWLIEKGFDVICYCANVGQYKEDFEKVREKAMKCGASKVYIEDLREEFVKEYVFWAVKANAQYEGRYLLGTSLARPVIAKRQVEIAQKEGAKWLSHGATGKGNDQVRFELCALALDATIQTLAPWREKEFIEQFKGRQDLLDYAAAHNIQVEATKKAPYSVDENLYHTSYESGMLEDPMVPPLKEMFKMTVDPEDAPDKSEKIRIDFQAGVPVKVTNHDDGTVK-TDALELFLYLNDLAGKHGVGRIDIVENRFVGIKSRGVYETPGGQILREAHMDLEGLCIDREVLRLKEGHQLEFSRLCYNGFWFAPEMELTMAAIDWTQKHVTGGVELSLYKGNVTVLGRESPFSLYSADLASMDIEGG 399
            K VLAYSGGLDTS+IL WL  KGF+VICYCANVGQ+ ED+EKVR KA+  GA KVYIEDLREEFVK Y+F AVK+NA YE RYLLGTSLARPVIAK+QVEIAQ EGAK+++HGATGKGNDQVRFELCA ALDA ++T+APWR+ EFIE+FKGR DL+ YA   NI ++AT KAPYSVDENLYHTSYE+GMLEDPM  P+ EMFKMTVDP+DAPD +E+I++ F+ G+PV VTN    T + T AL+LFL LN LAGKHG+GRIDIVENRFVGIKSRG YETPGG ILR AH+DLEGLC+DREV+++++    +F+  CYNGFWFAPEM+    A+D++Q+++TG V L LYKGNVTV+GR S  +LYSADLASMD EGG
Sbjct:   10 KVVLAYSGGLDTSIILKWLTNKGFEVICYCANVGQHGEDYEKVRAKALSLGAKKVYIEDLREEFVKHYIFEAVKSNAIYESRYLLGTSLARPVIAKKQVEIAQSEGAKYVAHGATGKGNDQVRFELCAQALDAQLKTIAPWRDAEFIEKFKGRADLIQYAKEQNIPIDATPKAPYSVDENLYHTSYEAGMLEDPMTAPMVEMFKMTVDPKDAPDAAEQIQVRFEKGIPVGVTNLTAKTPELTGALDLFLELNRLAGKHGIGRIDIVENRFVGIKSRGCYETPGGTILRHAHLDLEGLCMDREVMKVRDSLSAKFAEYCYNGFWFAPEMDFVRNAVDFSQQNITGFVNLELYKGNVTVIGRHSDEALYSADLASMDQEGG 388          
BLAST of NO05G00910 vs. NCBI_GenBank
Match: KUF88962.1 (voltage-gated potassium channel subunit beta [Phytophthora nicotianae])

HSP 1 Score: 563.9 bits (1452), Expect = 4.100e-157
Identity = 270/379 (71.24%), Postives = 319/379 (84.17%), Query Frame = 0
Query:   21 KCVLAYSGGLDTSVILVWLIEKGFDVICYCANVGQYKEDFEKVREKAMKCGASKVYIEDLREEFVKEYVFWAVKANAQYEGRYLLGTSLARPVIAKRQVEIAQKEGAKWLSHGATGKGNDQVRFELCALALDATIQTLAPWREKEFIEQFKGRQDLLDYAAAHNIQVEATKKAPYSVDENLYHTSYESGMLEDPMVPPLKEMFKMTVDPEDAPDKSEKIRIDFQAGVPVKVTNHDDGTVK-TDALELFLYLNDLAGKHGVGRIDIVENRFVGIKSRGVYETPGGQILREAHMDLEGLCIDREVLRLKEGHQLEFSRLCYNGFWFAPEMELTMAAIDWTQKHVTGGVELSLYKGNVTVLGRESPFSLYSADLASMDIEGG 399
            K VLAYSGGLDTS+IL WL  KGF+VICYCANVGQ+ ED+EKVR KA+  GA KVYIEDLREEFVK Y+F AVK+NA YE RYLLGTSLARPVIAK+QVEIAQ EGAK+++HGATGKGNDQVRFELCA ALDA ++T+APWR+ EFIE+FKGR DL+ YA   NI ++AT KAPYSVDENLYHTSYE+GMLEDPM  P+ EMFKMTVDP+DAPD +E+I++ F+ G+PV VTN    T + T AL+LFL LN LAGKHG+GRIDIVENRFVGIKSRG YETPGG ILR AH+DLEGLC+DREV+++++    +F+  CYNGFWFAPEM+    A+D++Q+++TG V L LYKGNVTV+GR S  +LYSADLASMD EGG
Sbjct:   10 KVVLAYSGGLDTSIILKWLTNKGFEVICYCANVGQHGEDYEKVRAKALSLGAKKVYIEDLREEFVKHYIFEAVKSNAIYESRYLLGTSLARPVIAKKQVEIAQSEGAKYVAHGATGKGNDQVRFELCAQALDAQLKTIAPWRDAEFIEKFKGRADLIQYAKEQNIPIDATPKAPYSVDENLYHTSYEAGMLEDPMTAPMVEMFKMTVDPKDAPDAAEQIQVRFEKGIPVGVTNLTAKTPELTGALDLFLELNRLAGKHGIGRIDIVENRFVGIKSRGCYETPGGTILRHAHLDLEGLCMDREVMKVRDSLSAKFAEYCYNGFWFAPEMDFVRNAVDFSQQNITGFVNLELYKGNVTVIGRHSDEALYSADLASMDQEGG 388          
BLAST of NO05G00910 vs. NCBI_GenBank
Match: XP_008609638.1 (argininosuccinate synthase [Saprolegnia diclina VS20] >EQC36857.1 argininosuccinate synthase [Saprolegnia diclina VS20])

HSP 1 Score: 562.8 bits (1449), Expect = 9.100e-157
Identity = 275/380 (72.37%), Postives = 319/380 (83.95%), Query Frame = 0
Query:   21 KCVLAYSGGLDTSVILVWLIEKGFDVICYCANVGQYKEDFEKVREKAMKCGASKVYIEDLREEFVKEYVFWAVKANAQYEGRYLLGTSLARPVIAKRQVEIAQKEGAKWLSHGATGKGNDQVRFELCALALDATIQTLAPWREKEFIEQFKGRQDLLDYAAAHNIQVEATKKAPYSVDENLYHTSYESGMLEDPMVPPLKEMFKMTVDPEDAPDKSEKIRIDFQAGVPVKVTN--HDDGTVKTDALELFLYLNDLAGKHGVGRIDIVENRFVGIKSRGVYETPGGQILREAHMDLEGLCIDREVLRLKEGHQLEFSRLCYNGFWFAPEMELTMAAIDWTQKHVTGGVELSLYKGNVTVLGRESPFSLYSADLASMDIEGG 399
            K VLAYSGGLDTS+IL WL+ KGF V+CYCANVGQ+ E+FEKV+ KAM  GA+KVYIEDLR+EFV +Y++ AV+ANA YE RYLLGTSLARPVIAKR VEIA+KEG K+++HGATGKGNDQVRFELCA AL+A+++T+APWR+ EFIE FKGRQDLL YA A NI V+AT KAPYSVDENLYHTSYESGMLEDPM  PL EMFKMTVDP+ APD +EKIRI F+ GVPVKV N       V TD LELFL LN L GKHGVGRIDIVENRFVGIKSRGVYETPGG ILR+AH+DLEGLC+DREV++L++   ++F+  CYNGFWFAPEM+    AI ++QK V G V++ LYKGNVT+ GR S  +LYSADLASMD+EGG
Sbjct:   10 KVVLAYSGGLDTSIILKWLVNKGFQVVCYCANVGQFGENFEKVQAKAMALGAAKVYIEDLRKEFVVDYLWPAVQANAIYESRYLLGTSLARPVIAKRMVEIAEKEGCKYVAHGATGKGNDQVRFELCAQALNASLKTIAPWRDPEFIEAFKGRQDLLAYAKAQNIPVDATPKAPYSVDENLYHTSYESGMLEDPMTGPLPEMFKMTVDPKVAPDAAEKIRITFENGVPVKVANLTTPSSPVFTDPLELFLELNRLGGKHGVGRIDIVENRFVGIKSRGVYETPGGTILRDAHLDLEGLCMDREVMKLRDSLSVKFAEFCYNGFWFAPEMDFVRHAIAFSQKAVAGHVDVELYKGNVTITGRYSDVALYSADLASMDMEGG 389          
BLAST of NO05G00910 vs. NCBI_GenBank
Match: XP_009519167.1 (hypothetical protein PHYSODRAFT_485399 [Phytophthora sojae] >EGZ23879.1 hypothetical protein PHYSODRAFT_485399 [Phytophthora sojae])

HSP 1 Score: 560.8 bits (1444), Expect = 3.500e-156
Identity = 271/379 (71.50%), Postives = 318/379 (83.91%), Query Frame = 0
Query:   21 KCVLAYSGGLDTSVILVWLIEKGFDVICYCANVGQYKEDFEKVREKAMKCGASKVYIEDLREEFVKEYVFWAVKANAQYEGRYLLGTSLARPVIAKRQVEIAQKEGAKWLSHGATGKGNDQVRFELCALALDATIQTLAPWREKEFIEQFKGRQDLLDYAAAHNIQVEATKKAPYSVDENLYHTSYESGMLEDPMVPPLKEMFKMTVDPEDAPDKSEKIRIDFQAGVPVKVTNHDDGTVK-TDALELFLYLNDLAGKHGVGRIDIVENRFVGIKSRGVYETPGGQILREAHMDLEGLCIDREVLRLKEGHQLEFSRLCYNGFWFAPEMELTMAAIDWTQKHVTGGVELSLYKGNVTVLGRESPFSLYSADLASMDIEGG 399
            K VLAYSGGLDTS+IL WL  KGF+VICYCANVGQ  ED+EKVR KA+  GA KVYIEDLRE+FVK+Y+F AVK+NA YE RYLLGTSLARPVIAK+QVEIAQ EGAK+++HGATGKGNDQVRFELCA ALDA ++T+APWR+ EFIE+FKGR DL+ YA   NI ++AT KAPYSVDENLYHTSYE+GMLEDPM  P+ EMFKMTVDP+DAPD +E+I I F+ G+PV VTN    T + T AL+LFL LN LAGKHG+GRIDIVENRFVGIKSRG YETPGG ILR AH+DLEGLC+DREV+++++    +F+  CYNGFWFAPEM+    A+D++Q++VTG V L LYKGNVTV+GR S  +LYSADLASMD EGG
Sbjct:   10 KVVLAYSGGLDTSIILKWLTNKGFEVICYCANVGQQGEDYEKVRAKALSLGAKKVYIEDLREDFVKDYIFEAVKSNAIYESRYLLGTSLARPVIAKKQVEIAQAEGAKYVAHGATGKGNDQVRFELCAQALDAHLKTIAPWRDAEFIEKFKGRADLIQYAKEQNIPIDATPKAPYSVDENLYHTSYEAGMLEDPMTAPMVEMFKMTVDPKDAPDAAEQISIRFEKGIPVGVTNLTAKTPELTGALDLFLELNKLAGKHGIGRIDIVENRFVGIKSRGCYETPGGTILRHAHLDLEGLCMDREVMKVRDTLSAKFAEFCYNGFWFAPEMDFVRNAVDFSQQNVTGYVNLELYKGNVTVIGRYSDEALYSADLASMDQEGG 388          
BLAST of NO05G00910 vs. NCBI_GenBank
Match: POM71027.1 (Argininosuccinate synthase [Phytophthora palmivora var. palmivora])

HSP 1 Score: 558.9 bits (1439), Expect = 1.300e-155
Identity = 273/379 (72.03%), Postives = 317/379 (83.64%), Query Frame = 0
Query:   21 KCVLAYSGGLDTSVILVWLIEKGFDVICYCANVGQYKEDFEKVREKAMKCGASKVYIEDLREEFVKEYVFWAVKANAQYEGRYLLGTSLARPVIAKRQVEIAQKEGAKWLSHGATGKGNDQVRFELCALALDATIQTLAPWREKEFIEQFKGRQDLLDYAAAHNIQVEATKKAPYSVDENLYHTSYESGMLEDPMVPPLKEMFKMTVDPEDAPDKSEKIRIDFQAGVPVKVTNHDDGTVK-TDALELFLYLNDLAGKHGVGRIDIVENRFVGIKSRGVYETPGGQILREAHMDLEGLCIDREVLRLKEGHQLEFSRLCYNGFWFAPEMELTMAAIDWTQKHVTGGVELSLYKGNVTVLGRESPFSLYSADLASMDIEGG 399
            K VLAYSGGLDTS+IL WL  KGF+VICYCANVGQ+ ED+EKVR KA+  GA KVYIEDLREEFVK Y+F AVKANA YE RYLLGTSLARPVIAK+QVEIAQ EGAK+++HGATGKGNDQVRFELCA ALDA ++T+APWR+ EFIE+FKGR DL+ YA   NI ++AT KAPYSVDENLYHTSYE+GMLEDPM  P+ EMFKMTVDP+ APD +E+I I F+ G+PV VTN    T + T ALELFL LN LAGKHG+GRIDIVENRFVGIKSRG YETPGG ILREAH+DLEGL +DREV+++++    +F+  CYNGFWFAPEM+    A+D++Q++VTG V L LYKGNVTV+GR S  +LYSADLASMD EGG
Sbjct:   10 KVVLAYSGGLDTSIILKWLTNKGFEVICYCANVGQHGEDYEKVRAKALSLGAKKVYIEDLREEFVKNYIFEAVKANAIYESRYLLGTSLARPVIAKKQVEIAQAEGAKYVAHGATGKGNDQVRFELCAQALDAHLKTIAPWRDAEFIEKFKGRADLIQYAKEQNIPIDATPKAPYSVDENLYHTSYEAGMLEDPMTAPMVEMFKMTVDPKVAPDAAEQISIRFEKGIPVGVTNLTAKTPELTGALELFLELNKLAGKHGIGRIDIVENRFVGIKSRGCYETPGGTILREAHLDLEGLTMDREVMKVRDTLSCKFAEFCYNGFWFAPEMDFVRHAVDFSQQNVTGYVHLELYKGNVTVIGRFSDEALYSADLASMDQEGG 388          
The following BLAST results are available for this feature:
BLAST of NO05G00910 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005853695.12.100e-20992.95argininosuccinate synthetase [Nannochloropsis gadi... [more]
GAX98959.11.000e-16073.61argininosuccinate synthase [Pythium insidiosum][more]
CBN78379.12.800e-15872.22argininosuccinate synthetase [Ectocarpus siliculos... [more]
XP_002999029.11.100e-15771.77argininosuccinate synthase [Phytophthora infestans... [more]
XP_012196551.12.400e-15772.11argininosuccinate synthase [Saprolegnia parasitica... [more]
XP_008891931.14.100e-15771.24argininosuccinate synthase [Phytophthora parasitic... [more]
KUF88962.14.100e-15771.24voltage-gated potassium channel subunit beta [Phyt... [more]
XP_008609638.19.100e-15772.37argininosuccinate synthase [Saprolegnia diclina VS... [more]
XP_009519167.13.500e-15671.50hypothetical protein PHYSODRAFT_485399 [Phytophtho... [more]
POM71027.11.300e-15572.03Argininosuccinate synthase [Phytophthora palmivora... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL087nonsL087Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL086nonsL086Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL084nonsL084Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR122ngnoR122Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR119ngnoR119Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR118ngnoR118Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003779NSK003779Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G00910.1NO05G00910.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|583680gene_2882Nannochloropsis oceanica (N. oceanica CCMP1779)gene
ASSgene2277Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G00910.1NO05G00910.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G00910 ID=NO05G00910|Name=NO05G00910|organism=Nannochloropsis oceanica|type=gene|length=2875bp
GCTGGCGACAGTTGTGGATGGCTTCAGGGCGAGGAGGCTATGGCGGCGGT
GGTTTCTTTGTGTCATTTCCTTTCCTCACAGTCAGATTTCTGATTTTATG
ACAACAAGATGATGCGTTATATAACTCCAGTCATGTCCATGGCTTTATCC
CAGCATCTGAGCCTTTGCATTCCCTTATCATGCAACATACACACAGATCT
ATCCATCCAATCAACCCCCAAACCATGGCCGAGAAGCCCAAGTGCGTTCT
AGCATACAGCGGTGGCTTGGATACGTCTGTAATCCTCGTCTGGCTCATTG
AAAAGgtacgttgtaaccgaattagcgtgcggatgcgcctgattgtttcg
gaggtgcatttttagttttagcctccccacccactccagccttatgtcct
caccgaacctttcttgttttccttccaacgtagGGTTTCGATGTCATTTG
CTATTGCGCCAATGTTGGCCAGTATAAAGAGGACTTTGAGAAGGTCCGAG
AGAAGGCCATGAAGTGTGGTGCATCCAAGgtaagattcggtggactaaga
agtgacggctggcgggagagtatcttttctcaaagtaaagcgggcgaaca
tgtcgcattacgcaaatagctcacatgcaaacattccccaacattcatcg
caattgtcaatagGTGTACATTGAGGATCTTCGCGAGGAGTTTGTGAAGG
AGTACGTCTTTTGGGCTGTCAAGgtgagcattagatgtgggaatcttggc
agcaggtcgacctccccttttctctctcgtgccttttcccttcttatctc
cccgcctatggacccgatcgagaacaaatggaggggttaaaattatgaag
gtagtctcctttattttgcgcatgagcagcgacatccatttctctctttt
tatgggtaacataacatataacccccccaccccccttcctccctccctcc
cttccttcccctctccctcccctcccccctcctctttccacagGCCAACG
CCCAATATGAAGGCCGCTACCTCCTCGGCACCTCCCTCGCCCGTCCTGTT
ATCGCCAAGCGCCAAGTCGAGATTGCTCAAAAAGAGGGGGCGAAGTGGTT
GTCGCACGGGGCCACCGGGAAAGGAAACGACCAAGTGCGGTTCGAGTTGT
GTGCTCTGGCGTTGGATGCCACCATTCAGACGTTAGCCCCCTGGAGGGAA
AAGGAGTTCATTGAGCAGTTTAAGGGACGACAGGACCTGTTGGATTACGC
GGCGGCACATAACATCCAGgtccaggagggagggagggacggagggaggg
tcagagggagggacggagggcgtgagggggtgcccgcttccttctttttt
ttcaagagaagtttttttcttccaggaaaaattagcatttcctgaatatg
aggaaatataaatagctttcactcattcgttatcctccctccccctccat
tgaccagGTGGAAGCGACCAAGAAAGCCCCTTACTCCGTGGACGAGAACC
TCTACCACACGTCCTACGAGAGCGGGATGCTCGAAGACCCCATGGTGCCC
CCTCTCAAGGAGATGTTCAAGATGACGGTCGACCCCGAGGATGCCCCTGA
TAAGgtatttcgtcgtcgtctctctctctctctctttctctctctctctt
tttctctctctctctttttctctctctttctttcttccttttcattcccc
ttcccctctttcctccgccctcccgccctccctgcgcctcttctcccgtt
cttcctttcctccttcatgccatgttgtttccttcactaggaatcggctg
gtattgagaggacagacgagcccacaacaggaccaagtaagcatcacaga
gtcacctctttccctcccaccctctttccctccctccctcctttccccca
gTCCGAGAAAATCCGCATTGACTTCCAGGCTGGGGTGCCCGTGAAGGTGA
CCAACCACGACGACGGCACGGTGAAGACGGACGCGCTGGAGCTGTTTTTG
TACCTAAATGACCTGGCTGGGAAGCACGGCGTAGGGCGCATAGACATAGT
GGAGAATCGCTTTGTTGGCATTAAATCCCGGGGGGTGTATGAGACCCCGG
GGGGTCAGATTCTGCGGGAGGCGCATATGGACTTGGAAGGGTTGTGCATT
GACCGAGAGGTGCTGCGGTTGAAGGAAGGGCACCAGTTGGAGTTTTCCCG
CCTGTGTTACAACGGGTTTTGGTTCGCGCCTGAAATGGAGTTAACCATGG
CAGCGATTGACTGGACGCAGAAGCACGTGACGGGAGGAGTGGAGTTGAGT
CTGTACAAGGGGAATGTGACGGTGCTGGGACGAGAGAGTCCGTTTTCGCT
ATACTCGGCGGATTTGGCGAGCATGGATATTGAGGGGGGGGTTCGGCGTT
TGATTACGACCCGATGGATGCCCAGGGATTTATTCGTATTAATGGTGTGA
GGCTCAAGGCGTACAATGCGCTGCAGAGGACGTTTCAGAAGTAATCATAT
TGAGTGATGGGGAGGGAGAAGAGGACCGGGACGGAGGAGGACTGCTGGAA
GACACAGGTGGAGGCAAACGTGACGAAAGCAGAACGTAGAAATGCAAGAG
ACGAGGAAGGGGTAAGAGAGGAAAGAGCAGAAGGAGAAAGATTAAGTTAC
AGAGGGGAGAAAGGAGTAATTGCATATCGGGAAATGCAAAGAAAAACGTT
TTTGAGGAGAGTGGACGATGAGTACTACAACCATCGAATGTGTCGCGGTG
CCGGCGATATGAGTGAGTTTTGGAATGGAGGCTTCGGAAGGAGACAGTTG
TCTGAGTCACTCGAGCAAAAGCACAACACAACATAATATGAATGCTTTGA
AGAACTACGCGAGAGTCCTTGCAGG
back to top

protein sequence of NO05G00910.1

>NO05G00910.1-protein ID=NO05G00910.1-protein|Name=NO05G00910.1|organism=Nannochloropsis oceanica|type=polypeptide|length=418bp
MQHTHRSIHPINPQTMAEKPKCVLAYSGGLDTSVILVWLIEKGFDVICYC
ANVGQYKEDFEKVREKAMKCGASKVYIEDLREEFVKEYVFWAVKANAQYE
GRYLLGTSLARPVIAKRQVEIAQKEGAKWLSHGATGKGNDQVRFELCALA
LDATIQTLAPWREKEFIEQFKGRQDLLDYAAAHNIQVEATKKAPYSVDEN
LYHTSYESGMLEDPMVPPLKEMFKMTVDPEDAPDKSEKIRIDFQAGVPVK
VTNHDDGTVKTDALELFLYLNDLAGKHGVGRIDIVENRFVGIKSRGVYET
PGGQILREAHMDLEGLCIDREVLRLKEGHQLEFSRLCYNGFWFAPEMELT
MAAIDWTQKHVTGGVELSLYKGNVTVLGRESPFSLYSADLASMDIEGGVR
RLITTRWMPRDLFVLMV*
back to top
Synonyms
Publications