NO05G00860, NO05G00860 (gene) Nannochloropsis oceanica

Overview
NameNO05G00860
Unique NameNO05G00860
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2679
Alignment locationchr5:266768..269446 -

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Properties
Property NameValue
DescriptionGtp-binding protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:266768..269446 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR031166G_ENGA
IPR032859KH_dom-like
IPR006073GTP_binding_domain
Homology
BLAST of NO05G00860 vs. NCBI_GenBank
Match: EWM28267.1 (gtp-binding protein [Nannochloropsis gaditana])

HSP 1 Score: 932.6 bits (2409), Expect = 7.300e-268
Identity = 506/682 (74.19%), Postives = 541/682 (79.33%), Query Frame = 0
Query:   14 PCGVCRRERRRRKRPASALHPPSSMRLTLLMAACVGWTASRSCVQAFVGPTAPLKSCSSRTSGFVQQHQTSSSITSLLQQQKISRSFSDAVTPLGMARGRSGTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLFFNSAMSGPVADXXXXXXXXLDEEGDDYVFNPADFPMLEGEIDFFGDMDGLEXXXXXXXXXXXXXXXXXXPTTSVPKRAAKLPVIAVIGRPNVGKSTIVNRLCKTMSTEPDAIVYDYEGVTRDRIYRKAEWNGRMFEVVDTGGLIFDEDQDNLFAPQIREQALLALEESVAAILVVDGQVGVTTLDEEIAKFLRLKKNKPIYVVVNKCETQNMGEAMASMFWKLGLGEPYPVSGLHGTGVAEVLEAMLPHIYHVDEAERDEAIKVAIVGRPNVGKSSLLNRLYGKERAIVSDIAGTTRDAVDAMVEANGKMYKFIDTAGIRRRKKVEYGNEFLMVNRALKAVRRADVVLLVVDVVEGVNDQDKILAQRIADDGRACVIVANKWDAVEKDDKTFNEAVVYVKEELFAVSWADVLFTSALTGQRCHKVFEAVDKAAKAHRMRVKTSILNEVLGEALKWQRPPTVKSSQQGRVYYCNQVATEPPAVVVFCNNPKLFPDSYKRYLDRKFRESLDLTGTPIRWHFRGKKLRQLAKTGSPVPYGMPGS 696
            P G      R R RP  A   P  +R  + +AAC  WT   S VQ F  P  PL +        VQ   T+ S +   +Q  + R+    +T L MARG SG  S                           XXXXXX              XXXXXXXX       YVFNPADFP+LEGEIDFFGD+DGLE                    T   K+A KLPV+AVIGRPNVGKSTIVNRLC+TMSTEPDAIVYDYEGVTRDRIYRKAEWNGR+FEVVDTGGLIFDEDQDNLFAPQIREQALLALEESVAAILVVDGQVGVTTLDEE+AKFLRL+KNKPI+V VNKCET NMGEAMASMFWKLGLGEP+PVSGLHGTGVAE+LE MLPHIY V+EAER+EAIKVAIVGRPNVGKSSLLNRLYGKERAIVSD+AGTTRDAVDA+VE NGK Y+FIDTAGIRRRKKVEYGNEFLMVNRALKAVRRADVVLLVVDVVEG+NDQDKILAQRIA+DGRACVIVANKWDAVEKDD+TFNEAVVYVKEELFAVSWADVLFTSALTGQRCHK+F+A+DKA+ AHR RVKTSILNEVLGEAL WQRPPTVKSSQQGRVYYCNQVATEPP+VVVFCNNPKLFPDSYKRYLDRKFRESLDLTGTPIRW+FRGKKLRQLAK GSPVPYGMPGS
Sbjct:   10 PSGSDNWRLRPRSRPGMAHRQPFHVRFFISVAACAAWTGRYSSVQGFAPPARPLHTKIEGMHCHVQPLSTAQSFSVHREQPHLDRTPKRKLTLLTMARGNSGGRS-------TGKGKQRGRKDTTAPGSPPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYVFNPADFPLLEGEIDFFGDLDGLEETEESRVLPGAQPLDTSGGITP-KKKAVKLPVLAVIGRPNVGKSTIVNRLCRTMSTEPDAIVYDYEGVTRDRIYRKAEWNGRVFEVVDTGGLIFDEDQDNLFAPQIREQALLALEESVAAILVVDGQVGVTTLDEEVAKFLRLQKNKPIFVAVNKCETPNMGEAMASMFWKLGLGEPFPVSGLHGTGVAEMLERMLPHIYEVEEAEREEAIKVAIVGRPNVGKSSLLNRLYGKERAIVSDVAGTTRDAVDALVEVNGKSYRFIDTAGIRRRKKVEYGNEFLMVNRALKAVRRADVVLLVVDVVEGINDQDKILAQRIAEDGRACVIVANKWDAVEKDDRTFNEAVVYVKEELFAVSWADVLFTSALTGQRCHKIFDAIDKASAAHRQRVKTSILNEVLGEALVWQRPPTVKSSQQGRVYYCNQVATEPPSVVVFCNNPKLFPDSYKRYLDRKFRESLDLTGTPIRWYFRGKKLRQLAKQGSPVPYGMPGS 683          
BLAST of NO05G00860 vs. NCBI_GenBank
Match: CBN77863.1 (PEngA, plastid EngA GTPase [Ectocarpus siliculosus])

HSP 1 Score: 571.6 bits (1472), Expect = 3.300e-159
Identity = 282/463 (60.91%), Postives = 361/463 (77.97%), Query Frame = 0
Query:  234 KLPVIAVIGRPNVGKSTIVNRLCKTMSTEPDAIVYDYEGVTRDRIYRKAEWNGRMFEVVDTGGLIFDEDQDNLFAPQIREQALLALEESVAAILVVDGQVGVTTLDEEIAKFLRLKKNKPIYVVVNKCETQNMGEAMASMFWKLGLGEPYPVSGLHGTGVAEVLEAMLPHIYHVDE-AERDEAIKVAIVGRPNVGKSSLLNRLYGKERAIVSDIAGTTRDAVDAMVEANGKMYKFIDTAGIRRRKKVEYGNEFLMVNRALKAVRRADVVLLVVDVVEGVNDQDKILAQRIADDGRACVIVANKWDAVE-KDDKTFNEAVVYVKEELFAVSWADVLFTSALTGQRCHKVFEAVDKAAKAHRMRVKTSILNEVLGEALKWQRPPTVKSS--QQGRVYYCNQVATEPPAVVVFCNNPKLFPDSYKRYLDRKFRESLDLTGTPIRWHFRGKKLRQLAKTG--SPVPY 691
            + PV+AVIGRPNVGKST+VNRL K    +  +IV+D  GVTRDR Y++A + G+ F+VVDTGGL+FD+   ++FA +IR+QAL+ALEE+ A I+VVDG VG   LD+EIA+FLR +K  P+ + VNKCE+Q  GE   + FW LGLGEP+P+SGLHG G+ ++++ +  H+Y VDE AE ++ I VAIVGRPNVGKSSLLNRL+G+ R+IVSD+ GTTRD++DAM E  G+ Y+ +DTAGIRR+ KV+YGNEF MVNRA KA+RRADVVLL+VDV  G+ DQD++LA RI  DGRACV+V NKWD VE KDD ++N+AV Y ++ L  V WA+V FTSA TGQRC K+F+ VD+ A  HR RVKTS+LNEVL +A+ WQ PP+ KSS   QG++YYCNQ+AT PP V VFCNNPKLF D+YKRYLDRKFRE L L  TPIR+ +RGK+LR++ +    +P PY
Sbjct:  218 RFPVVAVIGRPNVGKSTVVNRLAKRF--KDGSIVFDESGVTRDRTYKRAWYCGKDFDVVDTGGLVFDDKGGDVFAKEIRQQALIALEEATAVIMVVDGIVGCNVLDQEIARFLRQQK-VPVVLAVNKCESQKYGEIQTAEFWCLGLGEPWPISGLHGDGIYDMMDNVAEHLYEVDENAEEEDNINVAIVGRPNVGKSSLLNRLFGETRSIVSDVPGTTRDSIDAMFERGGRTYRLVDTAGIRRKGKVDYGNEFFMVNRAFKAIRRADVVLLMVDVEAGITDQDRVLADRIQSDGRACVVVCNKWDLVEDKDDSSYNKAVEYARQMLSPVKWAEVCFTSAKTGQRCTKLFDLVDEVAVQHRRRVKTSVLNEVLRDAVLWQAPPSKKSSGASQGKIYYCNQIATRPPTVAVFCNNPKLFGDNYKRYLDRKFREQLGLKSTPIRFLWRGKRLRRMEQDNRRNPKPY 677          
BLAST of NO05G00860 vs. NCBI_GenBank
Match: OEU08856.1 (GTP-binding protein EngA [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 535.0 bits (1377), Expect = 3.400e-148
Identity = 268/479 (55.95%), Postives = 347/479 (72.44%), Query Frame = 0
Query:  234 KLPVIAVIGRPNVGKSTIVNRLCKTMSTEPDAIVYDYEGVTRDRIYRKAEWNGRMFEVVDTGGLIFDEDQDNLFAPQIREQALLALEESVAAILVVDGQVGVTTLDEEIAKFLR---LKKNKPIYVVVNKCETQNMGEAMASMFWKLGLGEPYPVSGLHGTGVAEVLEAMLPHIYH-----------------VDEAERDEAIKVAIVGRPNVGKSSLLNRLYGKERAIVSDIAGTTRDAVDAMVEANG-------KMYKFIDTAGIRRRKKVEYGNEFLMVNRALKAVRRADVVLLVVDVVEGVNDQDKILAQRIADDGRACVIVANKWDA-VEKDDKTFNEAVVYVKEELFAVSWADVLFTSALTGQRCHKVFEAVDKAAKAHRMRVKTSILNEVLGEALKWQRPPTVKSSQQGRVYYCNQVATEPPAVVVFCNNPKLFPDSYKRYLDRKFRESLD-LTGTPIRWHFRGKKLRQLAK 684
            K P++A++GRPNVGKS  VNR+C T +    AIV D EG+TRDR YR A + G  F+VVDTGGL+F +D+  LFA +IREQA++A++ES   +LVVDG++G+T +D++IA+FLR   L +N P+ + VNKCE++ +G   A+ FW LGLGEP PVS LHG G AEVLE +   I                    DE ER E I VAIVGRPNVGKSSLLN L+G +RAIVS +AGTTRD++DA++E  G        +Y+F+DTAGIRRR KVEYG EF MVNRAL+A+RRADVVLLV+D   GV +QD+ILAQ+IADDGRAC I+ NKWDA V+KD  T++++V Y++ E+  + WA +LF SA TGQR  K++  VD A  AHR R+ TS+LNEVL +A+ WQ PP  ++  Q ++YYCNQV+T PP +VVFCN+PKL  D+YKRYLDRKFRESLD    TP+RW FRG++ R + +
Sbjct:   18 KEPLVAILGRPNVGKSAFVNRICGTQN--GGAIVADEEGITRDRTYRDANFLGENFQVVDTGGLVFADDESTLFAREIREQAMVAIDESSGVVLVVDGKIGMTAMDQQIAEFLRKDVLSRNLPVILAVNKCESETVGALNAAEFWNLGLGEPIPVSALHGVGTAEVLERLFEEIKQKQSAALPGFGTKDALAAFDELERPEEINVAIVGRPNVGKSSLLNALFGDQRAIVSKMAGTTRDSIDAVMERPGDNEGDLPTIYRFVDTAGIRRRAKVEYGPEFFMVNRALRAIRRADVVLLVMDATAGVTEQDRILAQKIADDGRACAIICNKWDAVVDKDSSTYDKSVKYIRAEMPQIRWAPILFISAETGQRVGKIYNVVDDAIGAHRKRISTSVLNEVLRDAILWQPPPARRNGAQAKIYYCNQVSTRPPTIVVFCNDPKLVNDNYKRYLDRKFRESLDGFEATPVRWIFRGRRARDIMR 494          
BLAST of NO05G00860 vs. NCBI_GenBank
Match: XP_002176526.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC50989.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 534.6 bits (1376), Expect = 4.400e-148
Identity = 264/466 (56.65%), Postives = 349/466 (74.89%), Query Frame = 0
Query:  234 KLPVIAVIGRPNVGKSTIVNRLCKTMSTEPDAIVYDYEGVTRDRIYRKAEWNGRMFEVVDTGGLIFDEDQDNLFAPQIREQALLALEESVAAILVVDGQVGVTTLDEEIAKFLRLKKNKPIYVVVNKCETQNMGEAMASMFWKLGLGEPYPVSGLHGTGVAEVLEAMLPHIYH---VDEAERDEAIKVAIVGRPNVGKSSLLNRLYGKERAIVSDIAGTTRDAVDAMVEAN--------GKMYKFIDTAGIRRRKKVEYGNEFLMVNRALKAVRRADVVLLVVDVVEGVNDQDKILAQRIADDGRACVIVANKWDA-VEKDDKTFNEAVVYVKEELFAVSWADVLFTSALTGQRCHKVFEAVDKAAKAHRMRVKTSILNEVLGEALKWQRPPTVKSSQQGRVYYCNQVATEPPAVVVFCNNPKLFPDSYKRYLDRKFRESLD-LTGTPIRWHFRGKKLRQLAKTGS 687
            K P+IA++GRPNVGKS +VNR+  + S    AIV D  G+TRDR YR AE+ G  F +VDTGGL+FD+D+  LFA +IREQA++A+EES A I+VVDGQ G+T +D  IA+FLR + + P++V VNKCE++  G   A+ FW LGLGEP+PVS LHG G AE++E +   I      D  +R E I +AI+GRPNVGKSSLLN ++G  RAIVS++AGTTRD++DA++E            +Y+F+DTAGIRR+ KV++G EF MVNRAL+A+RRADVVLL++D   GV +QD++LAQ+IADDGRACVIV NKWDA V+KD  T++++V Y +EEL  + WA +LF SA TGQR  K++ A+D A +AHR R+ T+ILNEVL +A+ WQ PPT ++  Q ++YYCNQV+T PP VVVFCN+PKL  D+Y+RYLDRKFRESLD    TPIRW FRG+++R + +  S
Sbjct:   68 KEPLIAIVGRPNVGKSALVNRIAGSQS--GGAIVADESGITRDRTYRPAEFLGERFMIVDTGGLVFDDDESTLFAKEIREQAMVAIEESAAVIMVVDGQTGLTGMDLMIAEFLRKEVDIPVHVAVNKCESEKTGAMSAADFWGLGLGEPFPVSALHGVGTAEIMETIFDSIAEKKTFDAEDRPEEINIAIIGRPNVGKSSLLNSIFGDTRAIVSEMAGTTRDSIDAVMERPPPPGSDDLSTIYRFVDTAGIRRKGKVDFGPEFFMVNRALRAIRRADVVLLILDATSGVAEQDRVLAQKIADDGRACVIVCNKWDAVVDKDSTTYDKSVQYFREELPMIRWAPILFISAATGQRVGKIYSAIDGAIEAHRKRISTAILNEVLRDAILWQPPPTRRNGSQAKIYYCNQVSTRPPTVVVFCNDPKLVNDNYRRYLDRKFRESLDGFEATPIRWIFRGRRVRDVMRNRS 531          
BLAST of NO05G00860 vs. NCBI_GenBank
Match: XP_002287171.1 (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >EED94614.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 524.2 bits (1349), Expect = 6.000e-145
Identity = 265/461 (57.48%), Postives = 341/461 (73.97%), Query Frame = 0
Query:  236 PVIAVIGRPNVGKSTIVNRLCKTMSTEPDAIVYDYEGVTRDRIYRKAEWNGRMFEVVDTGGLIFDEDQDNLFAPQIREQALLALEESVAAILVVDGQVGVTTLDEEIAKFLR--LKKNKPIYVVVNKCETQNMGEAMASMFWKLGLGEPYPVSGLHGTGVAEVLEAMLPHIYHV--DEAERDEAIKVAIVGRPNVGKSSLLNRLYGKERAIVSDIAGTTRDAVDAMVEANGK-------MYKFIDTAGIRRRKKVEYGNEFLMVNRALKAVRRADVVLLVVDVVEGVNDQDKILAQRIADDGRACVIVANKWDAV-EKDDKTFNEAVVYVKEELFAVSWADVLFTSALTGQRCHKVFEAVDKAAKAHRMRVKTSILNEVLGEALKWQRPPTVKSSQQGRVYYCNQVATEPPAVVVFCNNPKLFPDSYKRYLDRKFRESLD-LTGTPIRWHFRGKKLRQLAK 684
            P+IAV+GRPNVGKS +VNRL  T S    AIV D EG+TRDR YR AE+ G  F++VDTGGL+FD D D LFA +IREQA++A+EES   ILVVDGQ+G T++DE++A FLR  + K  P+ + VNKCE+   G  +AS FW LGLGEP+ VS LHG G AEV+E M   I      E + DE I VAI+GRPNVGKSSL+N ++G  RAIVSD+AGTTRD++DA++E           +Y+F+DTAGIRR+ K+E+G EF MVNRAL+A+RRADVVLLV+D   GV +QD++LAQ+I+DDGRACVI+ NKWDAV +KD  T++++V Y +EEL  + WA +LF SA TGQR  K++EAVD A  AHR R+ TS+LNEVL +A  WQ PP  ++  Q ++YY +QV+T PP +VVF N+P L  D+YKRYLDRK RESLD    TPIRW FRG+++R + +
Sbjct:    1 PLIAVVGRPNVGKSALVNRLAGTQS--GGAIVADEEGITRDRTYRNAEFLGEAFQLVDTGGLVFD-DNDALFAKEIREQAMIAIEESAGVILVVDGQMGPTSMDEQLAIFLRKEVLKKMPVILAVNKCESDKNGAYLASQFWNLGLGEPFAVSALHGVGTAEVMEKMFDDIAKPLDGEDDTDEEINVAIIGRPNVGKSSLINTIFGSNRAIVSDVAGTTRDSIDAIMERPSSDPEGLPTIYRFVDTAGIRRKGKIEFGPEFFMVNRALRAIRRADVVLLVLDATAGVTEQDRVLAQKISDDGRACVILCNKWDAVIDKDSSTYDQSVKYFREELPQIRWAPILFVSAATGQRVGKIYEAVDSAVNAHRRRISTSVLNEVLRDATLWQPPPARRNGAQAKIYYGSQVSTRPPTIVVFVNDPNLINDNYKRYLDRKMRESLDGFESTPIRWMFRGRRVRDVTR 458          
BLAST of NO05G00860 vs. NCBI_GenBank
Match: WP_106171093.1 (ribosome biogenesis GTPase Der [filamentous cyanobacterium CCP2] >PSB21834.1 ribosome biogenesis GTPase Der [filamentous cyanobacterium CCP2] >PSB60944.1 ribosome biogenesis GTPase Der [filamentous cyanobacterium CCP1])

HSP 1 Score: 521.5 bits (1342), Expect = 3.900e-144
Identity = 256/449 (57.02%), Postives = 336/449 (74.83%), Query Frame = 0
Query:  235 LPVIAVIGRPNVGKSTIVNRLCKTMSTEPDAIVYDYEGVTRDRIYRKAEWNGRMFEVVDTGGLIFDEDQDNLFAPQIREQALLALEESVAAILVVDGQVGVTTLDEEIAKFLRLKKNKPIYVVVNKCETQNMGEAMASMFWKLGLGEPYPVSGLHGTGVAEVLEAMLPHIYHVDEAERDEAIKVAIVGRPNVGKSSLLNRLYGKERAIVSDIAGTTRDAVDAMVEANGKMYKFIDTAGIRRRKKVEYGNEFLMVNRALKAVRRADVVLLVVDVVEGVNDQDKILAQRIADDGRACVIVANKWDAVEKDDKTFNEAVVYVKEELFAVSWADVLFTSALTGQRCHKVFEAVDKAAKAHRMRVKTSILNEVLGEALKWQRPPTVKSSQQGRVYYCNQVATEPPAVVVFCNNPKLFPDSYKRYLDRKFRESLDLTGTPIRWHFRGKKLRQLAK 684
            LPV+A+IGRPNVGKST+VNRL    +   DAIV+D  GVTRDR YR+A W  R F VVDTGGL+FD+D +  F P IREQAL+AL E+ AAILVVDGQ GVT  DE IA +LR ++  P+ + VNKCE+ + G   AS FW+LG+GEP+ VSG+HG G  E+L+A+L H+   +E E  + I+VAIVGRPNVGKSSLLN   G++R+IVS I+GTTRDA+D +VE  G  Y+ +DTAGIR++K VEYG EF  +NRA KA+RRADVVLLVVD ++G+ +QD+ LA RI +DGRACV+V NKWDA+EKD  T  E   ++K+ L    WA  ++ SA+TGQR  K+ E V+ AA+ H+ RV T++LNEVL EAL W  PPT +  +QG++YY  QVA++PP + +F N+PKLF D+Y+RY++R+FR+ L  TGTPIR  +RGKKLR++ +
Sbjct:    3 LPVVAIIGRPNVGKSTLVNRL----AGGKDAIVHDEPGVTRDRTYRQAYWQDRDFLVVDTGGLVFDDDTE--FLPLIREQALMALAEASAAILVVDGQAGVTGADETIAAWLR-QQTVPVLLAVNKCESPDQGLVQASEFWRLGIGEPFAVSGIHGNGTGELLDALLAHLPPTEELEEPDEIRVAIVGRPNVGKSSLLNAFVGEQRSIVSPISGTTRDAIDMVVEQGGHRYRLVDTAGIRKKKNVEYGPEFFGINRAFKAIRRADVVLLVVDALDGITEQDQKLAGRIIEDGRACVVVVNKWDAIEKDSHTIYEYERHLKDRLHFTEWAPTIYVSAMTGQRIDKILELVNTAAEQHKRRVSTAVLNEVLEEALNWHTPPTTRQGRQGKIYYGTQVASQPPTIALFVNDPKLFNDNYRRYIERQFRQQLGFTGTPIRIFWRGKKLREVER 444          
BLAST of NO05G00860 vs. NCBI_GenBank
Match: WP_017290366.1 (ribosome biogenesis GTPase Der [Leptolyngbya boryana] >BAS55113.1 ribosome-associated GTPase EngA [Leptolyngbya boryana IAM M-101] >BAS61461.1 ribosome-associated GTPase EngA [Leptolyngbya boryana dg5] >BAY58745.1 EngA protein [Leptolyngbya boryana NIES-2135])

HSP 1 Score: 520.4 bits (1339), Expect = 8.600e-144
Identity = 252/453 (55.63%), Postives = 335/453 (73.95%), Query Frame = 0
Query:  235 LPVIAVIGRPNVGKSTIVNRLCKTMSTEPDAIVYDYEGVTRDRIYRKAEWNGRMFEVVDTGGLIFDEDQDNLFAPQIREQALLALEESVAAILVVDGQVGVTTLDEEIAKFLRLKKNKPIYVVVNKCETQNMGEAMASMFWKLGLGEPYPVSGLHGTGVAEVLEAMLPHIYHVDEAERDEAIKVAIVGRPNVGKSSLLNRLYGKERAIVSDIAGTTRDAVDAMVEANGKMYKFIDTAGIRRRKKVEYGNEFLMVNRALKAVRRADVVLLVVDVVEGVNDQDKILAQRIADDGRACVIVANKWDAVEKDDKTFNEAVVYVKEELFAVSWADVLFTSALTGQRCHKVFEAVDKAAKAHRMRVKTSILNEVLGEALKWQRPPTVKSSQQGRVYYCNQVATEPPAVVVFCNNPKLFPDSYKRYLDRKFRESLDLTGTPIRWHFRGKKLRQLAKTGSP 688
            LP++A+IGRPNVGKST+VNRL +      DAIV+D  GVTRDR Y++A W  R F+VVDTGGL+FD+D +  F P IREQA+ AL ES AAI VVDGQ G+T  DEEIA++LR ++  P+ + VNKCE+ + G   A+ FW+LGLGEP+ VS +HG+G  ++L+ ++ H    DE E    IKVAI GRPNVGKSSLLN   G+ R+IVS I+GTTRDA+D +VE + KMY+ IDTAGIR++K VEYG EF  +NRA KA+ R+DVVLLV+D ++GV +QD+ LA RI D+GRACV++ NKWDA+EKD  T  E    +++ L  V WA+ +F SA TGQR  K+FE VD+AA+ H+ R+ TS++NEVL +AL W  PPT +  +QG++YY  QV++ PP + +F N+P LF D+Y+RY+DRKFRESL   GTP+R  +RGKKLR++ +  SP
Sbjct:    3 LPIVAIIGRPNVGKSTLVNRLAQVQ----DAIVFDQPGVTRDRTYKRAFWRDREFQVVDTGGLVFDDDTE--FLPLIREQAMAALAESKAAIFVVDGQAGLTQADEEIARWLR-QQPVPVLIAVNKCESVDQGLVQAAEFWELGLGEPFAVSSIHGSGTGDLLDRVVEHFPPTDEIEESPEIKVAIAGRPNVGKSSLLNAFVGENRSIVSPISGTTRDAIDMLVERDDKMYRLIDTAGIRKKKNVEYGPEFFGINRAFKAIDRSDVVLLVIDALDGVTEQDQKLAGRIDDEGRACVVIVNKWDAIEKDSHTIYEYDQQIRDRLHFVEWAESIFISAKTGQRVEKIFELVDRAAEQHKRRISTSVINEVLEDALSWHTPPTTRQGRQGKIYYGTQVSSAPPTIALFVNDPHLFNDNYRRYIDRKFRESLGFQGTPLRLLWRGKKLREVERGNSP 448          
BLAST of NO05G00860 vs. NCBI_GenBank
Match: WP_006670724.1 (MULTISPECIES: ribosome biogenesis GTPase Der [Arthrospira] >EDZ91995.1 small GTP-binding protein [Arthrospira maxima CS-328])

HSP 1 Score: 520.4 bits (1339), Expect = 8.600e-144
Identity = 256/451 (56.76%), Postives = 334/451 (74.06%), Query Frame = 0
Query:  236 PVIAVIGRPNVGKSTIVNRLCKTMSTEPDAIVYDYEGVTRDRIYRKAEWNGRMFEVVDTGGLIFDEDQDNLFAPQIREQALLALEESVAAILVVDGQVGVTTLDEEIAKFLRLKKNKPIYVVVNKCETQNMGEAMASMFWKLGLGEPYPVSGLHGTGVAEVLEAMLPHIYHVDEAERDEAIKVAIVGRPNVGKSSLLNRLYGKERAIVSDIAGTTRDAVDAMVEANGKMYKFIDTAGIRRRKKVEYGNEFLMVNRALKAVRRADVVLLVVDVVEGVNDQDKILAQRIADDGRACVIVANKWDAVEKDDKTFNEAVVYVKEELFAVSWADVLFTSALTGQRCHKVFEAVDKAAKAHRMRVKTSILNEVLGEALKWQRPPTVKSSQQGRVYYCNQVATEPPAVVVFCNNPKLFPDSYKRYLDRKFRESLDLTGTPIRWHFRGKKLRQLAKTGS 687
            P++A+IGRPNVGKST+VNRL +T     DAIV+D  G+TRDR YR A W  R F VVDTGGL+FD+D +  F P IREQAL+AL E+ AAILVVDGQ G T  DE IA +LR +K  PI + VNKCE+   G   A+ FW+LGLG P+P+S +HG+G  E+L+A++ ++    + E  E ++VAIVGRPNVGKSSLLN   G+ERAIVS I+GTTRDA+D +VE NG  Y+ +DTAGIRR+K VEYG EF  +NRA KA+RRADVVL V+D VEGV DQD+ LA RI+DDGRACVIV NKWDAVEKD  T  E    ++  L+ + WAD++F SA+TGQR  K+F+ VDKAA+ +R RV TS++NEV+ EA++W  PPT +  +QG++YY  QV + PP +V+F N+PK F D+Y+RY++ +FR+ L   GTPIR  +RGK +R++ +  S
Sbjct:    4 PIVAIIGRPNVGKSTLVNRLTQTQ----DAIVHDQPGMTRDRTYRSAYWQDREFTVVDTGGLVFDDDTE--FLPLIREQALMALAEATAAILVVDGQTGPTGGDEAIASWLRQQK-VPILLAVNKCESPTQGLTQAAQFWELGLGNPFPISSIHGSGTGELLDALIENLPASTDNEDSEELRVAIVGRPNVGKSSLLNTFLGQERAIVSPISGTTRDAIDTIVEHNGNTYRLVDTAGIRRKKHVEYGAEFFGINRAFKAIRRADVVLFVIDAVEGVTDQDQKLAGRISDDGRACVIVVNKWDAVEKDSYTILEYEKVMRSRLYFLDWADMIFVSAMTGQRVEKIFKLVDKAAEENRRRVSTSVINEVIEEAVRWHSPPTSRQGRQGKIYYGTQVTSSPPTIVLFVNDPKRFGDNYRRYMESQFRQQLGFAGTPIRLLWRGKAMREVERNSS 447          
BLAST of NO05G00860 vs. NCBI_GenBank
Match: WP_009631866.1 (ribosome biogenesis GTPase Der [Synechocystis sp. PCC 7509])

HSP 1 Score: 520.0 bits (1338), Expect = 1.100e-143
Identity = 251/453 (55.41%), Postives = 337/453 (74.39%), Query Frame = 0
Query:  235 LPVIAVIGRPNVGKSTIVNRLCKTMSTEPDAIVYDYEGVTRDRIYRKAEWNGRMFEVVDTGGLIFDEDQDNLFAPQIREQALLALEESVAAILVVDGQVGVTTLDEEIAKFLRLKKNKPIYVVVNKCETQNMGEAMASMFWKLGLGEPYPVSGLHGTGVAEVLEAMLPHIYHVDEAERDEAIKVAIVGRPNVGKSSLLNRLYGKERAIVSDIAGTTRDAVDAMVEANGKMYKFIDTAGIRRRKKVEYGNEFLMVNRALKAVRRADVVLLVVDVVEGVNDQDKILAQRIADDGRACVIVANKWDAVEKDDKTFNEAVVYVKEELFAVSWADVLFTSALTGQRCHKVFEAVDKAAKAHRMRVKTSILNEVLGEALKWQRPPTVKSSQQGRVYYCNQVATEPPAVVVFCNNPKLFPDSYKRYLDRKFRESLDLTGTPIRWHFRGKKLRQLAKTGSP 688
            LP++A+IGRPNVGKSTIVNRL  T +    AIVYD  G+TRDR Y  A W  R F VVDTGGL+FD+D +  F PQIREQA LAL+E+ AA+ +VDGQ G+   DEEIA++LR +++ P+ + VNKCE+  +G + AS FW+LGLGEP+P+SG+HG G  E+L+A++ H+   ++    + +K+AIVGRPNVGKSSLLN   G+ RAIVS I+GTTRDA+D ++E +GK Y+ IDTAGIRR+K VEYG EF  +NRA KA+RRADVVLLV+D  +GV +QD+ L  RI ++GR+CV+V NKWDAVEKD  T  +    +KE L+ + WA+++F SA TGQR  K+ E  D AA AH+ RV TS++NEVL EA++W  PPT +  +QG++YY  QV+T+PPA+ +F N    FP++YKRY++R+FR+ L   GTPIR  +R KK+R++  TGSP
Sbjct:    3 LPIVAIIGRPNVGKSTIVNRLAGTGA----AIVYDEPGITRDRTYVNAYWGDRDFVVVDTGGLVFDDDTE--FLPQIREQAALALKEASAALFIVDGQAGICAADEEIAQWLR-QQSVPVVLAVNKCESAELGLSQASQFWELGLGEPFPMSGIHGNGTGELLDAVVAHLPLAEDLPDVDEVKIAIVGRPNVGKSSLLNAFVGENRAIVSPISGTTRDAIDTVIERDGKTYRLIDTAGIRRKKNVEYGAEFFGINRAFKAIRRADVVLLVLDAEDGVTEQDQKLVARIEEEGRSCVVVINKWDAVEKDSYTIYDHEKTLKERLYFIEWAEMIFVSAKTGQRVEKILELADVAAAAHKRRVTTSVINEVLEEAVRWHSPPTSRQGRQGKIYYGTQVSTQPPAIALFVNEASRFPENYKRYIERQFRQQLGFVGTPIRLFWRSKKVREVENTGSP 448          
BLAST of NO05G00860 vs. NCBI_GenBank
Match: WP_008054740.1 (ribosome biogenesis GTPase Der [Arthrospira sp. PCC 8005] >CCE19007.1 GTP-binding protein EngA [Arthrospira sp. PCC 8005] >CDM97615.1 GTP-binding protein EngA [Arthrospira sp. PCC 8005])

HSP 1 Score: 519.2 bits (1336), Expect = 1.900e-143
Identity = 255/451 (56.54%), Postives = 334/451 (74.06%), Query Frame = 0
Query:  236 PVIAVIGRPNVGKSTIVNRLCKTMSTEPDAIVYDYEGVTRDRIYRKAEWNGRMFEVVDTGGLIFDEDQDNLFAPQIREQALLALEESVAAILVVDGQVGVTTLDEEIAKFLRLKKNKPIYVVVNKCETQNMGEAMASMFWKLGLGEPYPVSGLHGTGVAEVLEAMLPHIYHVDEAERDEAIKVAIVGRPNVGKSSLLNRLYGKERAIVSDIAGTTRDAVDAMVEANGKMYKFIDTAGIRRRKKVEYGNEFLMVNRALKAVRRADVVLLVVDVVEGVNDQDKILAQRIADDGRACVIVANKWDAVEKDDKTFNEAVVYVKEELFAVSWADVLFTSALTGQRCHKVFEAVDKAAKAHRMRVKTSILNEVLGEALKWQRPPTVKSSQQGRVYYCNQVATEPPAVVVFCNNPKLFPDSYKRYLDRKFRESLDLTGTPIRWHFRGKKLRQLAKTGS 687
            P++A+IGRPNVGKST+VNRL +T     DAIV+D  G+TRDR YR A W  R F VVDTGGL+FD+D +  F P IREQAL+AL E+ AAILVVDGQ G T  DE IA +LR +K  PI + VNKCE+   G   A+ FW+LGLG P+P+S +HG+G  E+L+A++ ++    + E  E ++VAIVGRPNVGKSSLLN   G+ERAIVS I+GTTRDA+D +VE NG  Y+ +DTAGIRR+K VEYG EF  +NRA KA+RRADVVL V+D VEGV DQD+ LA RI+DDGRACVIV NKWDAVEKD  T  E    ++  L+ + WAD++F SA+TGQR  K+F+ VDKAA+ +R RV TS++NEV+ EA++W  PPT +  +QG++YY  QV + PP +V+F N+PK F D+Y+RY++ +FR+ L   GTPIR  +RGK +R++ +  +
Sbjct:    4 PIVAIIGRPNVGKSTLVNRLTQTQ----DAIVHDQPGMTRDRTYRSAYWQDREFTVVDTGGLVFDDDTE--FLPLIREQALMALAEATAAILVVDGQTGPTGGDEAIASWLRQQK-VPILLAVNKCESPTQGLTQAAQFWELGLGNPFPISSIHGSGTGELLDALIENLPASTDNEDSEELRVAIVGRPNVGKSSLLNTFLGQERAIVSPISGTTRDAIDTIVEHNGNTYRLVDTAGIRRKKHVEYGAEFFGINRAFKAIRRADVVLFVIDAVEGVTDQDQKLAGRISDDGRACVIVVNKWDAVEKDSYTILEYEKVMRSRLYFLDWADMIFVSAMTGQRVEKIFKLVDKAAEENRRRVSTSVINEVIEEAVRWHSPPTSRQGRQGKIYYGTQVTSSPPTIVLFVNDPKRFGDNYRRYMESQFRQQLGFAGTPIRLLWRGKAMREVERNSA 447          
The following BLAST results are available for this feature:
BLAST of NO05G00860 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28267.17.300e-26874.19gtp-binding protein [Nannochloropsis gaditana][more]
CBN77863.13.300e-15960.91PEngA, plastid EngA GTPase [Ectocarpus siliculosus... [more]
OEU08856.13.400e-14855.95GTP-binding protein EngA [Fragilariopsis cylindrus... [more]
XP_002176526.14.400e-14856.65predicted protein [Phaeodactylum tricornutum CCAP ... [more]
XP_002287171.16.000e-14557.48predicted protein, partial [Thalassiosira pseudona... [more]
WP_106171093.13.900e-14457.02ribosome biogenesis GTPase Der [filamentous cyanob... [more]
WP_017290366.18.600e-14455.63ribosome biogenesis GTPase Der [Leptolyngbya borya... [more]
WP_006670724.18.600e-14456.76MULTISPECIES: ribosome biogenesis GTPase Der [Arth... [more]
WP_009631866.11.100e-14355.41ribosome biogenesis GTPase Der [Synechocystis sp. ... [more]
WP_008054740.11.900e-14356.54ribosome biogenesis GTPase Der [Arthrospira sp. PC... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL087nonsL087Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL086nonsL086Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL084nonsL084Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR122ngnoR122Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR119ngnoR119Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR118ngnoR118Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003774NSK003774Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G00860.1NO05G00860.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|583648gene_2876Nannochloropsis oceanica (N. oceanica CCMP1779)gene
PEngAgene2283Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G00860.1NO05G00860.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G00860 ID=NO05G00860|Name=NO05G00860|organism=Nannochloropsis oceanica|type=gene|length=2679bp
AGATGTCCAACTCGTCGATGCTCCCGCCGTGCGACTCCATCCCCTGCGGC
GTTTGCAGAAGAGAGAGAAGGCGACGCAAACGCCCAGCTTCCGCCCTCCA
TCCCCCCTCTAGTATGCGCTTGACCCTTCTCATGGCGGCCTGTGTAGGGT
GGACAGCGAGTCGTTCGTGCGTGCAAGCATTCGTGGGGCCCACCGCACCT
CTCAAAAGTTGCAGCAGCCGGACCAGCGGCTTTGTCCAGgtaggaagagc
agtgattggacgacaggagtgttgggggaagagaggcatagccaaaagtg
tgctgctgctgcggcaggcgcgagatattattcacatggagagagtctcc
gcatttgaagagcgaggggatcctatgttttaatgctttctcgtcttgtg
gccccatgaatatttgtggaatcatcatgcgacagtcattgcctcccatg
attggcaaacccacttacccacgctccgccccacccatacacagCAGCAT
CAGACCTCTTCCTCTATCACCTCCCTCCTCCAGCAGCAGAAAATAAGCAG
GAGCTTTAGCGACGCCGTCACTCCCCTCGGTATGGCCCGTGGTCGCAGCG
GCACCAGCAGCAGCGGCAAGGGCAAGCAACGCACCAGGAAGGAAGCATCC
CGCCCTTCCAACCCTTCCTCTCCCTCCTCCCCCAGCAGCAAAAGCCAGGA
GGAAGAGGATTTACTATTTTTCAATAGTGCCATGAGTGGTCCTGTTGCCG
ATGACGAGGACGACGATGGCTCGTCGTTGGATGAGGAGGGAGACGACTAC
GTGTTTAATCCTGCAGATTTCCCAATGCTCGAGGGAGAGATTGATTTCTT
TGGGGATATGGATGGGTTGGAGGAAGAGTCTGCCACCCCTGCTGCAGCAG
CAGCAGCGGCGGCGACCGATGTGGCACCTACCACGTCCGTGCCTAAGCGT
GCGGCGAAGCTGCCGGTCATTGCAGTGATAGGCCGACCGAACGTCGGGAA
ATCCACGATTGTGAACCGACTTTGCAAGACCATGAGCACTGAGCCTGATG
CCATCGTGTACGACTACGAGGGGGTGACCCGTGATCGGATCTATAGGAAG
GCGGAGTGGAACGGGAGAATGTTCGAGGTAGTGGATACAGGCGGACTTAT
CTTTGATGAAGACCAGGACAACCTGTTTGCGCCGCAGATTCGGGAGCAGG
CCTTGTTGGCGCTTGAGGAGAGTGTGGCGGCTATACTGGTGGTCGATGGA
CAGGTTGGGGTGACGACGTTGGACGAGGAAATTGCCAAATTCTTGAGGTT
GAAGAAGAACAAGCCGATTTATGTGGTGGTCAACAAGTGTGAGACACAGA
ACATGGGCGAGGCCATGGCGTCCATGTTCTGGAAATTGGGTCTGGGGGAA
CCGTATCCCGTGAGTGGGCTGCACGGGACGGGGGTAGCGGAGGTGCTTGA
AGCCATGTTGCCGCATATCTACCACGTGGACGAGGCGGAGAGGGATGAAG
CGATTAAGGTGGCCATTGTAGGTAGGCCGAACGTAGGGAAAAGCTCGCTT
TTGAACCGGTTGTATGGGAAGGAGCGGGCGATTGTTTCGGACATTGCCGG
CACGACTCGCGACGCGGTCGATGCAATGGTGGAGGCGAATGGAAAGATGT
ATAAGTTTATTGATACGGCGGGGATCCGGCGGAGGAAGAAGGTGGAATAT
GGGAATGAGTTTTTGATGGTCAATCGGGCGTTGAAGGCGGTGAGACGCGC
GGATGTTGTCTTGCTGGTGGTGGATGTTGTGGAGGGGGTGAACGACCAGG
ACAAGATCCTGGCGCAGCGCATCGCGGACGATGGACGGGCGTGTGTGATT
GTGGCGAACAAGTGGGATGCAGTCGAGAAGGACGACAAGACGTTCAACGA
GGCTGTGGTCTACGTGAAAGAGGAGCTGTTCGCCGTCAGTTGGGCTGACG
TCCTCTTCACCTCCGCCCTGACGGGGCAGCGCTGCCACAAGGTTTTCGAG
GCTGTTGACAAGGCAGCAAAGGCCCATCGCATGCGCGTCAAGACCAGCAT
CTTGAATGAAGTCCTGGGCGAGGCGTTGAAATGGCAACGACCGCCCACCG
TGAAAAGCTCTCAGCAAGGCCGCGTGTACTATTGCAATCAGGTTGCGACC
GAGCCCCCCGCAGTGGTAGTGTTCTGCAACAACCCAAAGCTGTTCCCTGA
TTCCTATAAAAGGTATTTAGATCGTAAATTCCGGGAGTCTCTTGACTTGA
CTGGCACGCCGATTAGATGGCATTTCCGGGGGAAGAAATTGAGGCAGCTG
GCTAAGACTGGCAGCCCCGTGCCTTATGGCATGCCTGGGAGTTAAAGAGA
CGGAGGGGAGGGAGAAGGGAGGAGGGAGAGAGGGGGGGAGTGGTGGGCAC
ATACAATCGGTAGGTGGGAGGCCTGGGGGAGTTACGGAGGAGGGGATGGA
GGACTGGAGAGAAAGAGGGAGGGAGGGATTGAGATCTGCATGTAAGTAAA
TAACGAAGGGGATGATCTAGGGAGAGGAAGGACTTGGGCGGAGGGGGTCT
TGGTGGTAAGAACACAGAGTGCATTCTGGATTAAGAAAAAGGGCACGATC
GAGATGGCAAATAAAAATAAAGAGAAAGAAGGAAAAAGCTGAATGCAACG
CACAGCTACTTGACTTGGCAGTGATGACG
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protein sequence of NO05G00860.1

>NO05G00860.1-protein ID=NO05G00860.1-protein|Name=NO05G00860.1|organism=Nannochloropsis oceanica|type=polypeptide|length=696bp
MSNSSMLPPCDSIPCGVCRRERRRRKRPASALHPPSSMRLTLLMAACVGW
TASRSCVQAFVGPTAPLKSCSSRTSGFVQQHQTSSSITSLLQQQKISRSF
SDAVTPLGMARGRSGTSSSGKGKQRTRKEASRPSNPSSPSSPSSKSQEEE
DLLFFNSAMSGPVADDEDDDGSSLDEEGDDYVFNPADFPMLEGEIDFFGD
MDGLEEESATPAAAAAAAATDVAPTTSVPKRAAKLPVIAVIGRPNVGKST
IVNRLCKTMSTEPDAIVYDYEGVTRDRIYRKAEWNGRMFEVVDTGGLIFD
EDQDNLFAPQIREQALLALEESVAAILVVDGQVGVTTLDEEIAKFLRLKK
NKPIYVVVNKCETQNMGEAMASMFWKLGLGEPYPVSGLHGTGVAEVLEAM
LPHIYHVDEAERDEAIKVAIVGRPNVGKSSLLNRLYGKERAIVSDIAGTT
RDAVDAMVEANGKMYKFIDTAGIRRRKKVEYGNEFLMVNRALKAVRRADV
VLLVVDVVEGVNDQDKILAQRIADDGRACVIVANKWDAVEKDDKTFNEAV
VYVKEELFAVSWADVLFTSALTGQRCHKVFEAVDKAAKAHRMRVKTSILN
EVLGEALKWQRPPTVKSSQQGRVYYCNQVATEPPAVVVFCNNPKLFPDSY
KRYLDRKFRESLDLTGTPIRWHFRGKKLRQLAKTGSPVPYGMPGS*
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Synonyms
Publications