NO05G00830, NO05G00830 (gene) Nannochloropsis oceanica

Overview
NameNO05G00830
Unique NameNO05G00830
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2153
Alignment locationchr5:260670..262822 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:260670..262822 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO05G00830 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL087nonsL087Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL086nonsL086Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR119ngnoR119Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR118ngnoR118Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G00830.1NO05G00830.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G00830.1NO05G00830.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G00830 ID=NO05G00830|Name=NO05G00830|organism=Nannochloropsis oceanica|type=gene|length=2153bp
ATGCAGGAGGAGAGGTTGGCGGCAAGGAAGGCAGCGAAACTGGCGGCTCG
CGCGGCGGAGAGAGGAGGAGTGGGGAGGAAAAGAGGGAAGAGGAAGGGGA
AGAAGCAGAGAGACTCTTCTCCTTCCTCGTCTTTCTCGGATGGGGGAAGC
GACGGTAGTGACAAGGAGGAGGGGGAGGGAGGGAGGGAGGGAGGGGTGGA
GGGTAAGAGGAAGAGCAGGCGAACGACGGTAAGGAGGAGGGTCAAGGGAG
TGAACAGCAACACCAGCAGCAGTAGCAGCAGCAGCTCTTCCTCCTCCTCT
TCCTCTTCGTCGGAGAGCGAAACAGAAGACGGAGGGAGGTCGGATGGGGA
GGGAGTGGATGGGGTACCTCCGGCGAAACGAGCGCGTTTAGAAGGGGACG
AGGAAGGGACGAGGAAGTTGCGGGCGTTACTGACACGTTACTTTGATGAG
GGGAAGTATAAGGATGTCCGGGTGTCGGAAATTGTGGTGGTGGCGAAGGA
GGAGTGTGGGCTAGAGGGGGTGGAGGCGGCGGTGTTGAAGACAGTGGTGA
CTGCCATGTTCAAAGAGATCGCCTTGGGGAGGATGTGGAGGAAGGCGAGA
GAGGAGGAGAGAACGGCGAGGAGGGAGGAGAGGAGGAGGGAGAAGGAGGA
GAGGAGGAGGGAGAAGGAGGAGAGGAGGAGGGAGAAGGAGGAGGAACGGA
GGGAGAGGAGGGAGAGGGAGGCGGTGATCGCTGAGAGGAAGAAGAAGGTG
GCCGACGCAGCCAAGGCACGGCGGGCCGCCAATGCAACTGCGAAAAAGGC
TCGCGCTGCTTCTGCTGCTGCTGCTGCTGCGGCTGCTTCGTCCTCTTCCT
CTTCCTCCTCTGACGAGGAAGAAGCCGACCTGAGCGGAGCCCAAAAGAAG
AGGGCTGAGGAAGGAAAGGAGGGAGGGAAGGAGGTATTGCCCGTGAGCCG
TGCCGCGATGAGTACTTACTTGGAGGAGATGCTGGAGGGAGTGTCCCTCG
AACAAACCTCCGCCAAGACCATCATGACACGTCTGCGCGATCATTTTGAA
CTAAACCCCGAGGAGTACATGGCTGTGCGCGGACCAGCAAGGGAGATTCT
GTCAGACATTGTGACTCGGGCGATGAGCTTGAGCCAGTTGGAGGCGGAGG
AGGAGGGGGGGGAGACGATGAATATGAGAGTAGAGGTCGAGGGAGGGAGG
GAGGTAGGTAGGGGTCATGGGTCTTTGGGCTCCTTCGGCGCAGGGGTGGC
GAGTGTGGGGTCGGTAGGTGGGGGGATGATGTCGCCTGCAGATATGTTTT
TAGAACAGGCGTTTGCGGTGGTAGGAGGGGAAGGGGATGAGGAAGGAATG
GAGGGTGGGCGCCTTCAGACGACGGCGGAGGAAGTGGAAGAGGACATGGC
AGCGTTGATGGCAGATTTCGATGGGGAGGAGAACGGTGGGGAGGGGGAGC
GGGAGAGGGAGGGAGAGAAACTGTCGCAGCACGAGGGAAAGTGTGCTGTG
TCCATCCCACTGGATGGGGATTTCCAGGCGGGGGATGACGAGGGGGAGGC
TGACAAGGAGAACATGGCAGCGTCGTCGTCTCTGCCTGCTCTTGCACATG
CGGGCAAGGGCATAGCGACGAAAGAGGGCACCATAAGGCAGGAGGAAGGA
GAGAAGGACGGCATGATGCTGGCTGAGCAGGAGGAGGACGAGGAGACGGG
CATAGATGCCCGAATGGCGGTGGGTGGAGGGGTGTCGCAGGATTACTAGT
CGGGATGTGACGAGAGATATAGTGGGAGGGGAAAGGATCCCTGGGCATTG
GTGGATAGAGGGGCAGGTCGAGGAAAGGACGGGCAATAAATAGAGACTTT
CATGGAAAAGAAGTGAAGTTATACCGCGACGGCGAAAAGAATGAAAATAA
GTCTATACCCCTTCACGAAGGCGTGTAAAGCAAGAATCGATATTTCCCTT
CCACACAAGGCTCACCGCCATCTTTGCAACATTAACCTCCTGACTACATG
CCCCTCGTTACAGCTTTAATACCTGTTTACGGCATCCACCAGGCCTCTGT
CATGCTGGTTCGAGGCTGTTGTAGCGTCTTCATCCGCCATGGTGGAGGTT
TTTGGTCAGTCTTCTGAGCATTGATGACCTCAAAGTGCTTATGGGCCAGT
GTC
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protein sequence of NO05G00830.1

>NO05G00830.1-protein ID=NO05G00830.1-protein|Name=NO05G00830.1|organism=Nannochloropsis oceanica|type=polypeptide|length=583bp
MQEERLAARKAAKLAARAAERGGVGRKRGKRKGKKQRDSSPSSSFSDGGS
DGSDKEEGEGGREGGVEGKRKSRRTTVRRRVKGVNSNTSSSSSSSSSSSS
SSSSESETEDGGRSDGEGVDGVPPAKRARLEGDEEGTRKLRALLTRYFDE
GKYKDVRVSEIVVVAKEECGLEGVEAAVLKTVVTAMFKEIALGRMWRKAR
EEERTARREERRREKEERRREKEERRREKEEERRERREREAVIAERKKKV
ADAAKARRAANATAKKARAASAAAAAAAASSSSSSSSDEEEADLSGAQKK
RAEEGKEGGKEVLPVSRAAMSTYLEEMLEGVSLEQTSAKTIMTRLRDHFE
LNPEEYMAVRGPAREILSDIVTRAMSLSQLEAEEEGGETMNMRVEVEGGR
EVGRGHGSLGSFGAGVASVGSVGGGMMSPADMFLEQAFAVVGGEGDEEGM
EGGRLQTTAEEVEEDMAALMADFDGEENGGEGEREREGEKLSQHEGKCAV
SIPLDGDFQAGDDEGEADKENMAASSSLPALAHAGKGIATKEGTIRQEEG
EKDGMMLAEQEEDEETGIDARMAVGGGVSQDY*
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Synonyms
Publications