NO05G00200, NO05G00200 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G00200 vs. NCBI_GenBank
Match: XP_009825208.1 (hypothetical protein H257_03015 [Aphanomyces astaci] >ETV85190.1 hypothetical protein H257_03015 [Aphanomyces astaci]) HSP 1 Score: 105.9 bits (263), Expect = 3.700e-19 Identity = 54/172 (31.40%), Postives = 86/172 (50.00%), Query Frame = 0 Query: 182 SPSKIISLRALEAWLNARPPFDVVLDAPNIAYYGQNFGDGRFNFNQIDIVLKALKAQGKRAFLVIPVKYTSRRIRDHVHREEGQGRGGGRVRALDDEETAMLERWTDEGIVYRIPRGQLDDLYWMYATVAARSDTASSPMIAISNDCMRDHWLDLLEARPFLRWKTTQVQSY 354 S +I A + WL+ PFDV++DA N+ Y+ QNF G F++ QI VLKA + +G++ +V+ RR +DH + + AM+++W + +++ G DD YW+YA V T + +SND MRDH ++ + F RWK + Y Sbjct: 286 SDERIEQWTAFKTWLDEHGPFDVIIDAANVGYFNQNFEGGGFSYPQIQTVLKAYQDKGQKPLIVL----HKRRTKDH---------------QVPEPHRAMVQQWKHDNVMFNCQYGNNDDWYWLYAAVKLSGRT-----LVVSNDEMRDHHFQMIHNQDFHRWKERHLVHY 433
BLAST of NO05G00200 vs. NCBI_GenBank
Match: OQR97935.1 (hypothetical protein ACHHYP_09428 [Achlya hypogyna]) HSP 1 Score: 105.9 bits (263), Expect = 3.700e-19 Identity = 55/166 (33.13%), Postives = 83/166 (50.00%), Query Frame = 0 Query: 191 ALEAWLNARPPFDVVLDAPNIAYYGQNFGDGRFNFNQIDIVLKALKAQGKRAFLVIPVKYTSRRIRDHVHREEGQGRGGGRVRALDDEETAMLERWTDEGIVYRIPRGQLDDLYWMYATVAARSDTASSPMIAISNDCMRDHWLDLLEARPFLRWKTTQVQSYRFD 357 A + WL+ PFDV+LDA NI Y+ QN+ G F++ QI VL A +A+GK+ +V+ + TS R + ++ +++ W D+G++Y G DD YW+YA V T + +SND MRDH ++ F RWK + Y D Sbjct: 287 AFKEWLDTNGPFDVILDAANIGYFSQNYEGGGFSYRQIQRVLSAYQARGKKVLIVLHKRRTSD-------------------RQVPEDLRPLVQAWRDDGVMYNCLPGNNDDWYWLYAAVKLGGRT-----LVVSNDEMRDHHFQMIHNVDFHRWKERHLVHYDKD 428
BLAST of NO05G00200 vs. NCBI_GenBank
Match: EJK45394.1 (hypothetical protein THAOC_35992 [Thalassiosira oceanica]) HSP 1 Score: 105.5 bits (262), Expect = 4.800e-19 Identity = 88/340 (25.88%), Postives = 147/340 (43.24%), Query Frame = 0 Query: 44 YASQGPTVFRQHLDDISCLLNLLGNKLVLNVTDAGIETLLNAFPSGGRGGGKV---AAARVRI-PGSGVCPHCQGQLRPLRLDQEERKELRERLLVLAEEKQAAWKSAGKLVLSSLASPGSGXXXXXXXXXXXXXXXXXXGPSPSKIISLRALEAWLNARPPFDVVLDAPNIAYYGQNFGDGRFNFNQIDIVLKALKAQGKRAFLVIPVKYTSRRIRDHVHREEGQGRGGGRVRALDDEETAMLERWTDEGIVYRIPRGQLDDLYWMYATVAARSDTASS------------------PMIAISNDCMRDHWLDLLEARPFLRWKTTQVQSYRFDYSVED 362 Y GP L D++ + VL ++ E L F G G V + +RV I + CP LR + L+ +R +R+ L+ +A EK + + L + G G +++++ + PF ++D N+AY FG G+ N +Q+ + AL+ QG+ +V P+KYT + H+ G V+ L +EE +L+ + G++Y +P LDDLYWM A+V+ ++ + PM+ I+ND MRDH L+LL+ R F RW + + +Y F +E+ Sbjct: 90 YPESGPDFLNALLSDMA--------EDVLEISSESAEVLQIGFAYGFHASGDVEGLSCSRVTIDENTAKCPMTDAILRLITLEPAQRNHVRDTLIKMAREKSLEY-------TAKLTAQGRG-----------PRDEDEKAEEATRMLAKFSERLDTREGKPFTAIVDGANVAY----FGFGKVNLHQLMHAVNALQDQGEHPLVVFPLKYTRKSF--HLRY--------GVVQVLGEEELGLLQDLKERGLLYVVPPMCLDDLYWMLASVSDQTTSRKGVSIDVPKHDNSGRFPGLRPMV-ITNDRMRDHKLELLDERAFRRWCCSHIVNYNFTQFIEN 388
BLAST of NO05G00200 vs. NCBI_GenBank
Match: XP_014527821.1 (hypothetical protein JH06_1709 [Blastocystis sp. subtype 4] >KNB44378.1 hypothetical protein JH06_1709 [Blastocystis sp. subtype 4]) HSP 1 Score: 105.5 bits (262), Expect = 4.800e-19 Identity = 82/346 (23.70%), Postives = 148/346 (42.77%), Query Frame = 0 Query: 2 YTPVLTRLWKAGNVTAAKEVWEGMMERGAVPNEE-HVVSMVECYASQGPTVFRQHLDDISCLLNLLGNKLVLNVTDAGIETLLNAFPSGGRGGGKVAAARVRIPGSGVCPHCQGQLRPLRLDQEERKELRERLLVLAEEKQAAWKSAGKLVLSSLASPGSGXXXXXXXXXXXXXXXXXXGPSPSKIISLRALEAWLNARPPFDVVLDAPNIAYYGQNFGDGRFNFNQIDIVLKALKAQGKRAFLVIPVKYTSRRIRDHVHREEGQGRGGGRVRALDDEETAMLERWTDEGIVYRIPRGQLDDLYWMYATVAARSDTASSPMIAISNDCMRDHWLDLLEARPFLRWK 347 Y P+L + K G++T E+ + M G +E + + C P F + L+++ + +L + + V LN + +I SGVC C + L L +++++ +++ L E + + K L S+ S SG P ++ + + +L + P+D++LD NIA+Y QNF G F++NQID++ L +QG + +V+ H H + T + E W ++G+ Y++ +G DD YWMYA +++ +T + +SND MRDH+ + F W+ Sbjct: 132 YLPLLKSVSKRGDLTLLTELCDHMRSHGIEFDESVYCYILNACINGSNPDQFIRSLNEMLKEVEVLQTEESIEVLQRFSFLSLNP---------RWVLRECQILSSGVCSVCGSTMSKLTLSVTDKRDIAQKVERLIESSRKSMK------LQSIGSKESG---------------------PDRLKNFLEFKEFLKKKGPYDILLDGANIAHYKQNFEGGSFDYNQIDMLATYLISQGYKILIVL-----------HEHH-------------FGKDYTTLPESWLEKGLAYKVVKGNNDDWYWMYAAMSSSHNT-----MVLSNDQMRDHFFQIDNDPRFQVWR 412
BLAST of NO05G00200 vs. NCBI_GenBank
Match: XP_008867682.1 (hypothetical protein H310_04913 [Aphanomyces invadans] >ETW03453.1 hypothetical protein H310_04913 [Aphanomyces invadans]) HSP 1 Score: 104.8 bits (260), Expect = 8.200e-19 Identity = 54/172 (31.40%), Postives = 86/172 (50.00%), Query Frame = 0 Query: 182 SPSKIISLRALEAWLNARPPFDVVLDAPNIAYYGQNFGDGRFNFNQIDIVLKALKAQGKRAFLVIPVKYTSRRIRDHVHREEGQGRGGGRVRALDDEETAMLERWTDEGIVYRIPRGQLDDLYWMYATVAARSDTASSPMIAISNDCMRDHWLDLLEARPFLRWKTTQVQSY 354 S ++ A +AWL+ PFDV++DA N+ Y+ QNF G FN+ QI V++A +++G +V+ RR +D+ + + AM+++W DE ++ G DD YW+YA V T + +SND MRDH ++ + F RWK + Y Sbjct: 287 SDERVAQWAAFKAWLDEHGPFDVIIDAANVGYFNQNFEGGGFNYGQIQTVVQAYQSKGLTPLIVL----HKRRTKDN---------------QVPAQHRAMVQQWKDEKTMFNCEYGNNDDWYWLYAAVKLGGRT-----LVVSNDEMRDHHFQMIHNQDFHRWKERHLVHY 434
BLAST of NO05G00200 vs. NCBI_GenBank
Match: XP_008867683.1 (hypothetical protein, variant 1 [Aphanomyces invadans] >ETW03454.1 hypothetical protein, variant 1 [Aphanomyces invadans]) HSP 1 Score: 104.8 bits (260), Expect = 8.200e-19 Identity = 54/172 (31.40%), Postives = 86/172 (50.00%), Query Frame = 0 Query: 182 SPSKIISLRALEAWLNARPPFDVVLDAPNIAYYGQNFGDGRFNFNQIDIVLKALKAQGKRAFLVIPVKYTSRRIRDHVHREEGQGRGGGRVRALDDEETAMLERWTDEGIVYRIPRGQLDDLYWMYATVAARSDTASSPMIAISNDCMRDHWLDLLEARPFLRWKTTQVQSY 354 S ++ A +AWL+ PFDV++DA N+ Y+ QNF G FN+ QI V++A +++G +V+ RR +D+ + + AM+++W DE ++ G DD YW+YA V T + +SND MRDH ++ + F RWK + Y Sbjct: 227 SDERVAQWAAFKAWLDEHGPFDVIIDAANVGYFNQNFEGGGFNYGQIQTVVQAYQSKGLTPLIVL----HKRRTKDN---------------QVPAQHRAMVQQWKDEKTMFNCEYGNNDDWYWLYAAVKLGGRT-----LVVSNDEMRDHHFQMIHNQDFHRWKERHLVHY 374
BLAST of NO05G00200 vs. NCBI_GenBank
Match: OAO14410.1 (hypothetical protein AV274_3895 [Blastocystis sp. ATCC 50177/Nand II]) HSP 1 Score: 104.4 bits (259), Expect = 1.100e-18 Identity = 89/349 (25.50%), Postives = 148/349 (42.41%), Query Frame = 0 Query: 2 YTPVLTRLWKAGNVTAAKEVWEGMMERGAVPNEEHV--VSMVECYASQGPTVFRQHLDDISCLLNLLGNKLVLNVTDAGIETLLNAFPSGGRGGGKVAAARVRIPGSGVCPHCQGQLRPLRLDQEERKELRERL--LVLAEEKQAAWKSAGKLVLSSLASPGSGXXXXXXXXXXXXXXXXXXGPSPSKIISLRALEAWLNARPPFDVVLDAPNIAYYGQNFGDGRFNFNQIDIVLKALKAQGKRAFLVIPVKYTSRRIRDHVHREEGQGRGGGRVRALDDEETAMLERWTDEGIVYRIPRGQLDDLYWMYATVAARSDTASSPMIAISNDCMRDHWLDLLEARPFLRWK 347 Y P+L + G++ A ++V M E +P +E+V M C A + +F L ++ ++L+ + ++++ A +E ++ V V I SG C C QLR L + EL + L+L++ ++ ++ + A +A+L P+D+ LD NIA+Y QNF G FN+ QI +V + L Q KR +V+ H H G T + E+W + G+ Y++ +G DDLYWMYA +AA +D + +SND MRDH+ + R F +W+ Sbjct: 145 YLPLLQGISDRGDIPAMRKVIAHMRENN-IPFDENVYYYEMKTCLAGKDEELFVVCLKELMKAVDLVETEPMVDLLKAFVERQASSIDVTRSYPSWVLKPCV-ILASGCCDVCGKQLRKEPLSLAAKHELASEVESLILSQTRKT---------------------------------------KEDRVENFLAFKAFLAKTGPYDIFLDGANIAHYKQNFDGGCFNYQQIQMVAEYLLRQKKRILIVL-----------HEHHFNQAG-------------TTLPEQWLERGLAYKVVKGNNDDLYWMYAALAADNDA-----MILSNDQMRDHFFHINNDRRFQKWR 423
BLAST of NO05G00200 vs. NCBI_GenBank
Match: XP_012897193.1 (LOW QUALITY PROTEIN: uncharacterized protein [Blastocystis hominis] >CBK23145.2 unnamed protein product [Blastocystis hominis]) HSP 1 Score: 101.3 bits (251), Expect = 9.000e-18 Identity = 65/244 (26.64%), Postives = 107/244 (43.85%), Query Frame = 0 Query: 103 IPGSGVCPHCQGQLRPLRLDQEERKELRERLLVLAEEKQAAWKSAGKLVLSSLASPGSGXXXXXXXXXXXXXXXXXXGPSPSKIISLRALEAWLNARPPFDVVLDAPNIAYYGQNFGDGRFNFNQIDIVLKALKAQGKRAFLVIPVKYTSRRIRDHVHREEGQGRGGGRVRALDDEETAMLERWTDEGIVYRIPRGQLDDLYWMYATVAARSDTASSPMIAISNDCMRDHWLDLLEARPFLRWK 347 I SG C HC Q++ + L E+ EL + + +++ + + G G ++ + R +A+L A PFD+ +D NIA+Y QNF G FN+ QID++ L+ QG + +V+ H H D T + ERW ++ + Y++ +G DD YWMYA +++R+D + +SND MRDH+ + F W+ Sbjct: 6 IVDSGECTHCGKQMQRIILPTAEKLELASEIEQVIQQRSGFDR-------MKRSKEGDG----------------------ERMENFRRFKAFLEANGPFDIFIDGANIAHYKQNFEGGTFNYQQIDMIASYLQQQGYKVLIVL-----------HEHH-------------FDQPTTDLPERWLEQKLAYKVVKGNNDDWYWMYAALSSRNDA-----MILSNDKMRDHFFQIHNDLRFQAWR 191
BLAST of NO05G00200 vs. NCBI_GenBank
Match: OQR90317.1 (hypothetical protein THRCLA_09375 [Thraustotheca clavata]) HSP 1 Score: 98.2 bits (243), Expect = 7.600e-17 Identity = 51/162 (31.48%), Postives = 81/162 (50.00%), Query Frame = 0 Query: 193 EAWLNARPPFDVVLDAPNIAYYGQNFGDGRFNFNQIDIVLKALKAQGKRAFLVIPVKYTS-RRIRDHVHREEGQGRGGGRVRALDDEETAMLERWTDEGIVYRIPRGQLDDLYWMYATVAARSDTASSPMIAISNDCMRDHWLDLLEARPFLRWKTTQVQSY 354 ++W++ P+DV+LDA NI Y+ QN+ G FN+ QI VL+A + +GK+ +V+ + TS + + +H+ +M+ W D+ +Y G DD YW+YA V S + +SND MRDH ++ F RWK + Y Sbjct: 284 KSWIDENGPYDVLLDAANIGYFNQNYEGGGFNYKQIQRVLQAYQRRGKKVLIVLHKRRTSDKEVPEHLR--------------------SMVAGWRDKNEMYNCRPGNNDDWYWLYAAV-----NFSGRTLVVSNDEMRDHHFQMISGVDFHRWKERHLVRY 420
BLAST of NO05G00200 vs. NCBI_GenBank
Match: PSC70853.1 (pentatricopeptide repeat [Micractinium conductrix]) HSP 1 Score: 97.8 bits (242), Expect = 1.000e-16 Identity = 91/360 (25.28%), Postives = 138/360 (38.33%), Query Frame = 0 Query: 2 YTPVLTRLWKAGNVTAAKEVWEGMMERGAVPNEEHVVSMVECYAS------QGPTVFRQHLDDISCLLNLLGNKLVLNVTDAGIETLLNAFPSGGRGGGKVAAARVRIPGSGVCPHCQGQLRPLRLDQEERKELRERLLVLAEEKQAAWKSAGKLVLSSLASPGSGXXXXXXXXXXXXXXXXXXGPSPSKIISLRALEAWLNARPPFDVVLDAPNIAYYGQNFGDGRFNFNQIDIVLKALKAQGKRAFLVIPVKYTSRRIRDHVHREEGQGRGGGRVRALDDEETAMLERWTDEGIVYRIPRGQLDDLYWMYATVAARSDTASSPMIAISNDCMRDHWLDLLEARPFLRWKTTQVQSYRF 356 Y+P L +AGN A EV + + E +++ A+ + +V R+ +++ L ++ AG GG V A I +GVC C GQL L + +E E + +AE ++ + + +AWL PF V+D N+A YGQNF G FNF QI V+ LK++ ++ + HV R + +A + A+L++ T E Y P G DD YW+YA+V TA + + +SND MRDH LL + FL+WK Y F Sbjct: 230 YSPALIAFAEAGNANKAFEVDAAIAAQQLDLTEAEFARLLQAAAAAPSPWGRAASVLRRIGGELTVLQPDTLARVRALFASAGAAXXXXXXXXXXXGGWDVGA--TTISPTGVCVSCAGQLAALDMSGDELVAFAEGIAAIAERQE------------------------------------------KRPNDFQQFKAWLERHGPFGAVIDGANVALYGQNFETGGFNFGQIRAVINHLKSRHPDLKPLLML---------HVGRTKAP-------QAKAPDAQALLKQLTAEHSFYTTPAGSNDDWYWIYASV-----TAGAKGLLVSNDEMRDHIFQLLAPKYFLKWKQRHQVKYHF 524 The following BLAST results are available for this feature:
BLAST of NO05G00200 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
The following polypeptide feature(s) derives from this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G00200 ID=NO05G00200|Name=NO05G00200|organism=Nannochloropsis oceanica|type=gene|length=4624bpback to top protein sequence of NO05G00200.4 >NO05G00200.4-protein ID=NO05G00200.4-protein|Name=NO05G00200.4|organism=Nannochloropsis oceanica|type=polypeptide|length=579bpback to top protein sequence of NO05G00200.3 >NO05G00200.3-protein ID=NO05G00200.3-protein|Name=NO05G00200.3|organism=Nannochloropsis oceanica|type=polypeptide|length=716bpback to top protein sequence of NO05G00200.2 >NO05G00200.2-protein ID=NO05G00200.2-protein|Name=NO05G00200.2|organism=Nannochloropsis oceanica|type=polypeptide|length=614bpback to top protein sequence of NO05G00200.1 >NO05G00200.1-protein ID=NO05G00200.1-protein|Name=NO05G00200.1|organism=Nannochloropsis oceanica|type=polypeptide|length=502bpback to top Synonyms
Publications
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