NO04G05210, NO04G05210 (gene) Nannochloropsis oceanica

Overview
NameNO04G05210
Unique NameNO04G05210
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2188
Alignment locationchr4:1462215..1464402 +

Link to JBrowse

Properties
Property NameValue
DescriptionCDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:1462215..1464402 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0008444CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0032049cardiolipin biosynthetic process
GO:0009987cellular process
GO:0009058biosynthetic process
GO:0006629lipid metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR001736PLipase_D/transphosphatidylase
IPR016270PLipase-D_PtdSer-synthase-type
Homology
BLAST of NO04G05210 vs. NCBI_GenBank
Match: XP_005856023.1 (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, partial [Nannochloropsis gaditana CCMP526] >EKU20337.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 274.6 bits (701), Expect = 6.800e-70
Identity = 155/256 (60.55%), Postives = 180/256 (70.31%), Query Frame = 0
Query:   46 PTPPALLSSLFDRAPSPRPPLFPLPPSSISFLREPSEFYHTLFESISRCRDRLTLSALYLGHGPMEQALVQHITAACAKYPSLQVHILLDHSRGTRGHSHHASSLTTLAPLLSL----PSFSS--PNVRVSLFRMPQLSGPLARRFLPSPVNEAVAVSHVKVMAFDDEEILITGANLSQDYFTTRQDRYVHIRGXXXXXXXXXXXXXXXXXXXACFYHELIETLGRYAVSPLVALSQEHRSVV-DFQALKTELTDL 295
            P+P A LSSL + A +PR PLFPL  SS+SFL +P  FY TL ++I+R  DR+TLSALYLGHGPMEQALVQHI AAC K P+L+V ILLDHSRGTRGH    SSLTTLAPLLSL    PS +S  P   V+L RMPQLSGP ARRF+PSP+NE +AVSHVK +AFDDEEIL+TGANLS DYF+ RQDRYVH+RG                     FYH L+ETL  + +SP  AL+   + VV DF ALK  L  L
Sbjct:   71 PSPHAFLSSLLENAHAPRTPLFPLRASSVSFLPDPPAFYQTLLDAIARSHDRITLSALYLGHGPMEQALVQHILAACHKKPNLRVQILLDHSRGTRGHRQGTSSLTTLAPLLSLTRTRPSSTSLQPQAHVALLRMPQLSGPWARRFIPSPLNEVLAVSHVKALAFDDEEILLTGANLSHDYFSRRQDRYVHVRG-PWPNFSGADGGDGRLASLPLFYHGLVETLMPFGLSPAQALAPASQGVVRDFGALKVALGGL 325          
BLAST of NO04G05210 vs. NCBI_GenBank
Match: EWM28909.1 (phosphatidylglycerophosphate synthase 1 [Nannochloropsis gaditana])

HSP 1 Score: 245.7 bits (626), Expect = 3.400e-61
Identity = 131/191 (68.59%), Postives = 150/191 (78.53%), Query Frame = 0
Query:   46 PTPPALLSSLFDRAPSPRPPLFPLPPSSISFLREPSEFYHTLFESISRCRDRLTLSALYLGHGPMEQALVQHITAACAKYPSLQVHILLDHSRGTRGHSHHASSLTTLAPLLSL----PSFSS--PNVRVSLFRMPQLSGPLARRFLPSPVNEAVAVSHVKVMAFDDEEILITGANLSQDYFTTRQDRYVH 231
            P+P A LSSL + A +PR PLFPL  SS+SFL +P  FY TL ++I+R  DR+TLSALYLGHGPMEQALVQHI AAC K P+L+V ILLDHSRGTRGH    SSLTTLAPLLSL    PS +S  P   V+L RMPQLSGP ARRF+PSP+NE +AVSHVK +AFDDEEIL+TGANLS DYF+ RQDR  H
Sbjct:   71 PSPHAFLSSLLENAHAPRTPLFPLRASSVSFLPDPPAFYQTLLDAIARSHDRITLSALYLGHGPMEQALVQHILAACHKKPNLRVQILLDHSRGTRGHRQGTSSLTTLAPLLSLTRTRPSSTSLQPQAHVALLRMPQLSGPWARRFIPSPLNEVLAVSHVKALAFDDEEILLTGANLSHDYFSRRQDRRWH 261          
BLAST of NO04G05210 vs. NCBI_GenBank
Match: XP_008611223.1 (hypothetical protein SDRG_07181 [Saprolegnia diclina VS20] >EQC35473.1 hypothetical protein SDRG_07181 [Saprolegnia diclina VS20])

HSP 1 Score: 222.2 bits (565), Expect = 4.000e-54
Identity = 174/489 (35.58%), Postives = 231/489 (47.24%), Query Frame = 0
Query:   46 PTPPALLSSLFDRAPSPRPPLFPLPPSSISFLREPSEFYHTLFESISRCRDRLTLSALYLGHGPMEQALVQHITAACAKYPSLQVHILLDHSRGTRGHSHHASSLTTLAPLLSLPSFSSPNVRVSLFRMPQLSGPLARRFLPSPVNEAVAVSHVKVMAFDDEEILITGANLSQDYFTTRQDRYVHIRGXXXXXXXXXXXXXXXXXXXACFYHELIETLGRYA--VS-----PLVALSQEHRSVVDFQALKTELTDLFSSTSPSLPPSFSDEHVCWAMPTVQCGPLGLRLDQTLLHALLSASPSPSSASQHMSLATAYLNPPLSFLEDLQTWQQGGTXXXXXXXXXXXXXXXXXXXXXXXXXRHLSILCPSAETHGFAGARGIKAFIPLAYALHEQRVRKHFRPSLPPSLPLSLYRYTRPGWTFHGKGLWLLEGEEEGEGGREGEGVALTVAGSSNYGHRSFERDLESQVWLVSADGGLKERMREERASL 528
            P+P   +  +FD      P  FPL   ++S L  P  FY  L  +I   R R++LS+LY+G   + +ALV  +  A A  PSL+V I+LD+SRG RG +   SS+  LAPLL +      NVR+ L+R+PQL    A+R LP P +E + VSH KV   DD  ++++GANLS DYFT RQDRYV I                     A FYH  +E +  +A  VS     PLV  +    S  DF    ++L    S T PS           WAMPT+Q  PL +  DQ  L  L+   P  SS    + +A+ YLN P    E L                                   L +L  +   +GF    GIK  +P+AY+L E      F P L     L+L  Y R  WTFHGKGLW+ +             V LT+ GSSN+G RS+ RDLESQV+L + D  L+   + E   L
Sbjct:    2 PSPKVTVEGVFDDLALSNPS-FPLDSDAVSVLTSPDAFYQQLLTNIRAARRRISLSSLYIGTDDLSRALVATLQEAVAANPSLEVSIVLDYSRGQRGGNTAKSSVAVLAPLLDV---HPGNVRLHLYRVPQLEHWAAKR-LPPPFDETMGVSHSKVYLCDD-TLIMSGANLSGDYFTQRQDRYVQIHS----------------THLAAFYHTFVEVMAEHAHGVSMSNGVPLV--NAPLGSAADFANALSDLQQYPSVTEPS-------NATTWAMPTIQFSPLRIVQDQHTLSRLVGLLPEHSS----VDIASGYLNFPPFLTEAL-----------------------------VDRGVPLDVLTAAPMANGFFNGNGIKGALPMAYSLIEAGFYDRFGPEL-----LTLREYNRSNWTFHGKGLWVHDC---------NGAVPLTIVGSSNFGQRSYGRDLESQVYLFTTDPALQTTFQGEYEQL 412          
BLAST of NO04G05210 vs. NCBI_GenBank
Match: OWZ06060.1 (Phosphatidylglycerolphosphate synthase, partial [Phytophthora megakarya])

HSP 1 Score: 221.1 bits (562), Expect = 8.900e-54
Identity = 166/484 (34.30%), Postives = 235/484 (48.55%), Query Frame = 0
Query:   66 LFPLPPSSISFLREPSEFYHTLFESISRCRDRLTLSALYLGHGPMEQALVQHITAACAKYPSLQVHILLDHSRGTRGHSHHASSLTTLAPLLSLPSFSSPNVRVSLFRMPQLSGPLARRFLPSPVNEAVAVSHVKVMAFDDEEILITGANLSQDYFTTRQDRYVHIRGXXXXXXXXXXXXXXXXXXXACFYHELIETLGRYAVS----------PLVALSQEHRSVVDFQALKTELTDLFSSTSPSLPPSFSDEHVCWAMPTVQCGPLGLRLDQTLLHALLSASPSPSSASQHMSLATAYLNPPLSFLEDLQTWQQGGTXXXXXXXXXXXXXXXXXXXXXXXXXRHLSILCPSAETHGFAGARGIKAFIPLAYALHEQRVRKHFRPSLPPSLPLSLYRYTRPGWTFHGKGLWLLEGEEEGEGGREGEGVAL-----TVAGSSNYGHRSFERDLESQVWLVSADGGLKERMREERASLLRECSSV 535
            LFPL  S ++ L  P++FY  L  +I R   R+++S+LYLG G +E+ALV  + A     P LQV I+LD+SRG RG    ASS+T LAPLL    F   NV + LFR+PQLSG  A+  LP P NE + VSH KV    DE ++++GANLS DYFT RQDRYV +                     A FYH+ +E +  ++             L++    H S     A++     L   T+        +    WA PT+Q  P+ +  DQ +L   +   P  S     + +A+ YLN P  FL +L    + G                            L ++  +   +GF  ARG+K  IP+AY+L EQ     F  +L    P  +  + RPGWTFHGKG+W          G +   VAL     TV GSSN+G RS+  DLES + + + +  L+ R+++E  +L R+   V
Sbjct:    5 LFPLRSSDVALLASPTDFYQQLLRNIQRAEHRVSISSLYLGTGQLERALVDALAARLRDKPKLQVQIVLDYSRGQRG-GVSASSVTMLAPLLK--EFPD-NVELFLFRVPQLSGLKAK--LPPPFNETLGVSHAKVYLV-DETLVLSGANLSADYFTNRQDRYVQL---------------TDCGALAQFYHQFVELVTGFSYKVKLSTKKNDYELMSPELAHDSEQAKAAMRXXXEKLVDPTNHEQERKNDELTDAWAFPTLQFTPISMDHDQRVLSEFVKNLPRGS----QLQIASGYLNFP-PFLSELLGCCEAG----------------------------LDVISAAPRANGFYDARGVKGAIPMAYSLIEQ---DFFERTLGREFPTIMREFNRPGWTFHGKGMWWRPPPSPVTNGHK---VALGLPQITVVGSSNFGQRSYGCDLESNLVMFTRNPELQRRLQDEYDALTRDAEVV 427          
BLAST of NO04G05210 vs. NCBI_GenBank
Match: XP_002899133.1 (CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase, putative [Phytophthora infestans T30-4] >EEY62497.1 CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase, putative [Phytophthora infestans T30-4])

HSP 1 Score: 219.9 bits (559), Expect = 2.000e-53
Identity = 166/482 (34.44%), Postives = 238/482 (49.38%), Query Frame = 0
Query:   66 LFPLPPSSISFLREPSEFYHTLFESISRCRDRLTLSALYLGHGPMEQALVQHITAACAKYPSLQVHILLDHSRGTRGHSHHASSLTTLAPLLSLPSFSSPNVRVSLFRMPQLSGPLARRFLPSPVNEAVAVSHVKVMAFDDEEILITGANLSQDYFTTRQDRYVHIRGXXXXXXXXXXXXXXXXXXXACFYHELIETLG----RYAVSPLVALSQEHRSVV-----DFQALKTEL-TDLFSSTSPSLPPSFSDE--HVCWAMPTVQCGPLGLRLDQTLLHALLSASPSPSSASQHMSLATAYLNPPLSFLEDLQTWQQGGTXXXXXXXXXXXXXXXXXXXXXXXXXRHLSILCPSAETHGFAGARGIKAFIPLAYALHEQRVRKHFRPSLPPSLPLSLYRYTRPGWTFHGKGLWLLEGEEEGEGGREGEGV-ALTVAGSSNYGHRSFERDLESQVWLVSADGGLKERMREERASLLRECSSV 535
            LFPL  S ++ L  P++FY  L  +I     R+++S+LYLG G +E  LV  + A   + P LQV I+LD+SRG RG    ASS+T LAPLL    F + NV + LFR+PQLSG  A+  LP P NE + VSH KV   DD  ++++GANLS DYFT RQDRYV +                     A FYH+ ++ +     R  +  L +   +++ +      D +A KT +  DL     PS      D+     WA PT+Q  P+ +  D+ +L   +   P  S     + +A+ YLN P  FL  L    Q G                            L ++  +   +GF  ARG+K  +P+AY+L EQ     F  ++    P  L  + RP WTFHGKG+W        +G     G+  LTV GSSN+G RS+  DLES + L + +  L+ R+++E  +L R+   V
Sbjct:   23 LFPLRSSDVTLLATPTDFYQQLVHNIQLAETRISISSLYLGTGQLESDLVDALAARLKERPQLQVQIVLDYSRGQRG-GVTASSVTMLAPLLK--QFPN-NVELFLFRVPQLSGLKAK--LPPPFNETLGVSHAKVYLVDD-TLVLSGANLSNDYFTNRQDRYVQLTN---------------CGALAQFYHQFVQLVTGFSYRVKLESLTSAKSDYKLLAPQLAHDSEAAKTAMRRDLEKLVDPSQYQQDKDDARTDAWAFPTLQFTPISMDHDERVLSEFVRQLPRGS----QLQIASGYLNFP-PFLSGLLEHCQAG----------------------------LDVISAAPRANGFYDARGVKGALPMAYSLIEQ---DFFERTISREYPTVLREFNRPNWTFHGKGMW---WRPPSDGRSSARGLPQLTVVGSSNFGQRSYGCDLESNLVLFTRNSELQHRLQDEYDALTRDAEVV 443          
BLAST of NO04G05210 vs. NCBI_GenBank
Match: XP_012204516.1 (hypothetical protein SPRG_20814 [Saprolegnia parasitica CBS 223.65] >KDO24777.1 hypothetical protein SPRG_20814 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 219.2 bits (557), Expect = 3.400e-53
Identity = 174/496 (35.08%), Postives = 234/496 (47.18%), Query Frame = 0
Query:   46 PTPPALLSSLFDRAPSPRPPLFPLPPSSISFLREPSEFYHTLFESISRCRDRLTLSALYLGHGPMEQALVQHITAACAKYPSLQVHILLDHSRGTRGHSHHASSLTTLAPLLSLPSFSSPNVRVSLFRMPQLSGPLARRFLPSPVNEAVAVSHVKVMAFDDEEILITGANLSQDYFTTRQDRYVHIRGXXXXXXXXXXXXXXXXXXXACFYHELIETLGRYA--VS-----PLVALSQEHRSVVDFQALKTELTDLFSSTSPSLPPSFSDEHVCWAMPTVQCGPLGLRLDQTLLHALLSASPSPSSASQHMSLATAYLNPPLSFLEDLQTWQQGGTXXXXXXXXXXXXXXXXXXXXXXXXXRHLSILCPSAETHGFAGARGIKAFIPLAYALHEQRVRKHFRPSLPPSLPLSLYRYTRPGWTFHGKGLWLLEGEEEGEGGREGEGVALTVAGSSNYGHRSFERDLESQVWLVSADGGLKERMREERASLLRECSSV 535
            P+P A + ++FD      P  FPL   ++S L  P  FY  L  +I   + R++LS+LY+G   + +ALV  +  A A  P L+V I+LD+SRG RG +   SS+  L PLL        NVR+ L+R+PQL    A+R LP P +E + VSH KV   DD  ++++GANLS DYFT RQDRYV I                     A FYH  +E +  +A  VS     PLV  +    S  DF    ++L    S T PS           WAMPT+Q  PL +  DQ  L  L+   P  +S    + +A+ YLN P    E L                                   L +L  +   +GF    GIK  +P+AY+L E      F P L     L+L  Y R  WTFHGKGLW+ +        R G  V LT+ GSSN+G RS+ RDLESQV+L + D  L+   + E   L     +V
Sbjct:    2 PSPKATVEAVFDDLALSNPS-FPLESDAVSVLTSPDAFYQQLLTNIRAAQRRISLSSLYIGTDELSRALVATLQEAVAANPCLEVSIVLDYSRGQRGGNTAKSSVAVLTPLLEA---HPGNVRLHLYRVPQLEHWAAKR-LPPPFDETMGVSHSKVYLCDD-TLIMSGANLSGDYFTQRQDRYVQI----------------DSKHLAAFYHTFVEVMAEHAHGVSMSGGVPLV--NAPMGSPADFANALSDLQQYPSVTEPS-------NATTWAMPTIQFSPLRIVQDQHTLSRLVGLLPEHAS----LDIASGYLNFPPFLTEAL-----------------------------VDRGVPLDVLTAAPMANGFFNGNGIKGALPMAYSLIEAGFYDRFGPEL-----LTLREYNRSDWTFHGKGLWVHD--------RNG-AVPLTIVGSSNFGQRSYGRDLESQVYLFTTDPALQTTFQGEYEQLRTHSETV 419          
BLAST of NO04G05210 vs. NCBI_GenBank
Match: OQR98093.1 (CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase [Achlya hypogyna])

HSP 1 Score: 216.9 bits (551), Expect = 1.700e-52
Identity = 161/484 (33.26%), Postives = 228/484 (47.11%), Query Frame = 0
Query:   46 PTPPALLSSLFDRAPSPRPPLFPLPPSSISFLREPSEFYHTLFESISRCRDRLTLSALYLGHGPMEQALVQHITAACAKYPSLQVHILLDHSRGTRGHSHHASSLTTLAPLLSLPSFSSPNVRVSLFRMPQLSGPLARRFLPSPVNEAVAVSHVKVMAFDDEEILITGANLSQDYFTTRQDRYVHIRGXXXXXXXXXXXXXXXXXXXACFYHELIETLGRYAVSPLV------ALSQEHRSVVDFQALKTELTDLFSSTSPSLPPSFSDEHVCWAMPTVQCGPLGLRLDQTLLHALLSASPSPSSASQHMSLATAYLNPPLSFLEDLQTWQQGGTXXXXXXXXXXXXXXXXXXXXXXXXXRHLSILCPSAETHGFAGARGIKAFIPLAYALHEQRVRKHFRPSLPPSLPLSLYRYTRPGWTFHGKGLWLLEGEEEGEGGREGEGVALTVAGSSNYGHRSFERDLESQVWLVSADGGLKERMREE 524
            P+P   + + FD      P  FP+   +IS L+ P+EFY  L  +I     R++LS+LY+G   + + LV  +  A A  P L+V I+LD+SRG RG +   SS+  L PLL+       NVR+ L+R+PQL    A+R LP P +E + VSH KV   DD  ++++GANLS DYFT RQDRYV +                     A FYH  +E +  +A +  +       +S       +F    ++L    S T PS           W MPT+Q  PL +  DQ  L  L++  P+ +S    + +A+ YLN P    E L                                   L +L  +   +GF    GIK  +P+AY+L E      F   L     L+L  Y RP WTFHGKGLW+    +          V LT+ GSSN+G RS+ RDLESQV++ + D  L+   R+E
Sbjct:    2 PSPQLTVEAAFDDLALSNPS-FPIASDAISVLQSPTEFYDRLLHNIRHATRRISLSSLYIGTDELSRGLVAALVEAVAANPQLEVTIVLDYSRGQRGGNTRNSSVAVLQPLLAA---HPANVRLHLYRVPQLEHWAAKR-LPPPFDETIGVSHSKVYLCDD-TLIMSGANLSGDYFTQRQDRYVQLES----------------RHLALFYHTFVEVMATHAHAVAIDRAGAPVVSPPAADAAEFANALSDLQQFPSVTEPS-------NATTWLMPTIQFSPLRVLQDQHTLSRLVALLPAAAS----IDIASGYLNFPPFLTEAL-----------------------------VDRGLALDVLTAAPSANGFFNGNGIKGALPMAYSLIEANFYDRFDRDL-----LTLREYNRPNWTFHGKGLWVHSAPD--------GPVDLTIVGSSNFGQRSYGRDLESQVYIFTKDPVLQATFRDE 410          
BLAST of NO04G05210 vs. NCBI_GenBank
Match: XP_009531443.1 (phosphatidylglycerolphosphate synthase [Phytophthora sojae] >EGZ14014.1 phosphatidylglycerolphosphate synthase [Phytophthora sojae])

HSP 1 Score: 216.1 bits (549), Expect = 2.900e-52
Identity = 165/486 (33.95%), Postives = 239/486 (49.18%), Query Frame = 0
Query:   66 LFPLPPSSISFLREPSEFYHTLFESISRCRDRLTLSALYLGHGPMEQALVQHITAACAKYPSLQVHILLDHSRGTRGHSHHASSLTTLAPLLSLPSFSSPNVRVSLFRMPQLSGPLARRFLPSPVNEAVAVSHVKVMAFDDEEILITGANLSQDYFTTRQDRYVHIRGXXXXXXXXXXXXXXXXXXXACFYHELIETLGRYAVS-PLVALSQEHRSVVDFQALKTELT------------DLFSSTSPSLPPSFSDEHV--CWAMPTVQCGPLGLRLDQTLLHALLSASPSPSSASQHMSLATAYLNPPLSFLEDLQTWQQGGTXXXXXXXXXXXXXXXXXXXXXXXXXRHLSILCPSAETHGFAGARGIKAFIPLAYALHEQRVRKHFRPSLPPSLPLSLYRYTRPGWTFHGKGLWLLEGEEEGEGGREGE-GV-ALTVAGSSNYGHRSFERDLESQVWLVSADGGLKERMREERASLLRECSSV 535
            LFPL  S ++ L  PS FY  L  +I     R+++S+LYLG G +E+ALV  + +   + P LQV ++LD+SRG RG    ASS+T LAPLL    F   NV + LFR+PQLSG  A+  LP P NE + VSH KV   DD  ++++GANLS DYFT RQDRYV +                     A FYH+ +E +  ++    L  L+ E     D++ ++  L             D+ S   P       ++ +   WA PT+Q  P+ +  D+ +L   +   P  S     + +A+ YLN P  FL DL      G                            L ++  +   +GF  ARG+K  +P+AY+L EQ     F  +L    P  L  + RPGWTFHGKG+W          G + E G+  +TV GSSN+G RS+  DLES + + + +  L+ R+++E  +L R+   V
Sbjct:   22 LFPLRSSDVALLPSPSAFYRQLLRNIQHAERRVSISSLYLGTGQLEEALVDALASRLRERPELQVQVVLDYSRGQRG-GLTASSVTMLAPLLK--EFPD-NVELFLFRVPQLSGIKAK--LPPPFNETLGVSHAKVYLVDD-TLVLSGANLSDDYFTNRQDRYVQL---------------TQCGGLAQFYHQFVELVTGFSYKVKLETLTGEKN---DYELIEPVLAHDSDEAKAAMRKDMESLVDPDKHHEDKEDELTDAWAFPTLQFTPMSMDHDERVLSMFVKNLPRGS----QLQIASGYLNFP-PFLSDLLEKCDAG----------------------------LDVISAAPRANGFYDARGVKGALPMAYSLIEQ---DFFERTLGREFPTVLREFNRPGWTFHGKGMWWRPPPLPVTNGYKAELGLPQVTVVGSSNFGQRSYGCDLESNLVVFTRNPDLQRRLQDEYDALTRDSEVV 446          
BLAST of NO04G05210 vs. NCBI_GenBank
Match: XP_012752437.1 (hypothetical protein SAMD00019534_079430 [Acytostelium subglobosum LB1] >GAM24768.1 hypothetical protein SAMD00019534_079430 [Acytostelium subglobosum LB1])

HSP 1 Score: 214.9 bits (546), Expect = 6.400e-52
Identity = 159/493 (32.25%), Postives = 239/493 (48.48%), Query Frame = 0
Query:   65 PLFPLPPSSISFLREPSEFYHTLFESISRCRDRLTLSALYLGHGPMEQALVQHITAACAKYPSLQVHILLDHSRGTRGHSH------HASSLTTLAPLLSLPSFSSPNVRVSLFRMPQLSGPLARRFLPSPVNEAVAVSHVKVMAFDDEEILITGANLSQDYFTTRQDRYVHIRGXXXXXXXXXXXXXXXXXXXACFYHELIETLG----RYAVSPLVAL-----------------SQEHRSVVDFQALKTELTDLFSSTSP--SLPPSFSDEHVCWAMPTVQCGPLGLRLDQTLLHALLSASPSPSSASQHMSLATAYLNPPLSFLEDLQTWQQGGTXXXXXXXXXXXXXXXXXXXXXXXXXRHLSILCPSAETHGFAGARGIKAFIPLAYALHEQRVRKHFRPSLPPSLPLSLYRYTRPGWTFHGKGLWLLEGEEEGEGGREGEGV-ALTVAGSSNYGHRSFERDLESQVWLVSADGGLKERMREERASL 528
            P F +  +++ F+REP++FY  L E + RC  R+ LS+LYLG G  E  LV+ + AAC ++P+LQVHILLD  RGTR   H      H SS T L PLL         V +S+F  P L+G + +R LP  +NE + V+H+K   FDD  +LI+GANLS+DYFT RQDRY  +R                    A ++  +I T+G    +  VS  V L                 +Q+  S +    +   + D  S+ SP  SL  S    +  W  PT+Q G   +R D+     +  + P  S     + + + Y N   ++L  L + +                               + I+  S ET+GF GA+GI   IP +YA+ E+   +  + +   S  + +  Y R  WT+H KGLW+           +G+ V ++T+ GS N+G RS E+DLE+Q+ L++ D  L+ +M +ERA L
Sbjct:   64 PAFAVDSNNVEFIREPNDFYEQLIEGVKRCERRVVLSSLYLGTGKQEIRLVEELVAACKRHPNLQVHILLDGLRGTRKSPHDTDPTKHVSSATMLQPLLQQ---FPDRVVISMFHTPNLNG-ILKRVLPQRINEVIGVNHIKAYVFDD-NLLISGANLSKDYFTNRQDRYAWVRS---------------SSALAEYFSRVIGTIGDLSMKLDVSGHVRLPTGLLDPVSDSSAFKQHAQQRLSTLLQPNVFHPINDDGSACSPTNSLEASAICNNKTWIFPTIQMGLFNIRHDEQCTSYMFESVPPTSK----LYITSPYFNLTKNYLRLLLSGKPA-----------------------------MDIITCSPETNGFYGAKGISGVIPDSYAIIERNFLQRVKDT-HNSARIKVDEYIRSKWTYHAKGLWIT---------AQGQAVPSVTMIGSPNFGSRSCEKDLEAQIILITEDPTLQRKMDDERAYL 493          
BLAST of NO04G05210 vs. NCBI_GenBank
Match: KUF76281.1 (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [Phytophthora nicotianae] >KUF99811.1 hypothetical protein AM588_10009740 [Phytophthora nicotianae])

HSP 1 Score: 213.8 bits (543), Expect = 1.400e-51
Identity = 164/485 (33.81%), Postives = 236/485 (48.66%), Query Frame = 0
Query:   66 LFPLPPSSISFLREPSEFYHTLFESISRCRDRLTLSALYLGHGPMEQALVQHITAACAKYPSLQVHILLDHSRGTRGHSHHASSLTTLAPLLSLPSFSSPNVRVSLFRMPQLSGPLARRFLPSPVNEAVAVSHVKVMAFDDEEILITGANLSQDYFTTRQDRYVHIRGXXXXXXXXXXXXXXXXXXXACFYHELIETLGRYAVS-------------PLVALSQEHRSVVDFQALKTELTDLFSSTSPSLPPSFSDEHV-CWAMPTVQCGPLGLRLDQTLLHALLSASPSPSSASQHMSLATAYLNPPLSFLEDLQTWQQGGTXXXXXXXXXXXXXXXXXXXXXXXXXRHLSILCPSAETHGFAGARGIKAFIPLAYALHEQRVRKHFRPSLPPSLPLSLYRYTRPGWTFHGKGLWLLEGEEEGEGGREGE-GV-ALTVAGSSNYGHRSFERDLESQVWLVSADGGLKERMREERASLLRECSSV 535
            LFPL  S ++ L  P++FY  L  +I     R+++S+LYLG G +E+ LV  +     + P LQV I+LD+SRG RG    ASS+T LAPLL    F + NV + LFR+PQLSG  A+  LP P NE + VSH KV   DD  ++++GANLS DYFT RQDRYV +                     A FYH+ +E +  ++                L+A    H S     A++ +L  L  S+         DE    WA PT+Q  P+ +  D+ +L   +   P  S     + +A+ YLN P    E L+  + G                             L ++  +   +GF  ARG+K  +P+AY+L EQ     F  +L    P  L  + R GWTFHGKG+W          G +   G+  LTV GSSN+G RS+  DLES + L + +  L++R+++E  +L R+   V
Sbjct:   23 LFPLRSSDVALLATPTDFYQQLVHNIQHAERRISISSLYLGTGHLERDLVDALATRLKERPQLQVQIVLDYSRGQRG-GVTASSVTMLAPLLK--QFPN-NVELFLFRVPQLSGLKAK--LPPPFNETLGVSHAKVYLVDD-TLVLSGANLSNDYFTNRQDRYVQLTS---------------CGALAQFYHQFVELVTGFSYKVKLDSLTSDKNDYELLAPVLAHDSEKAKTAMRRDLEKLVDSS--KYQQDKDDELTDAWAFPTLQFTPISMDHDERVLSEFVRHLPRGS----QLQIASGYLNFPPFLSELLERCEAG-----------------------------LDVISAAPRANGFYDARGVKGALPMAYSLIEQ---DFFERTLGREFPTVLREFNRLGWTFHGKGMWWRPPPPAVTNGHQSAVGLPQLTVVGSSNFGQRSYGCDLESNLVLFTRNADLQQRLQDEYDALTRDAEVV 447          
The following BLAST results are available for this feature:
BLAST of NO04G05210 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005856023.16.800e-7060.55CDP-diacylglycerol--glycerol-3-phosphate 3-phospha... [more]
EWM28909.13.400e-6168.59phosphatidylglycerophosphate synthase 1 [Nannochlo... [more]
XP_008611223.14.000e-5435.58hypothetical protein SDRG_07181 [Saprolegnia dicli... [more]
OWZ06060.18.900e-5434.30Phosphatidylglycerolphosphate synthase, partial [P... [more]
XP_002899133.12.000e-5334.44CDP-diacylglycerol-glycerol-3-phosphate 3-phosphat... [more]
XP_012204516.13.400e-5335.08hypothetical protein SPRG_20814 [Saprolegnia paras... [more]
OQR98093.11.700e-5233.26CDP-diacylglycerol-glycerol-3-phosphate 3-phosphat... [more]
XP_009531443.12.900e-5233.95phosphatidylglycerolphosphate synthase [Phytophtho... [more]
XP_012752437.16.400e-5232.25hypothetical protein SAMD00019534_079430 [Acytoste... [more]
KUF76281.11.400e-5133.81CDP-diacylglycerol--glycerol-3-phosphate 3-phospha... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL080nonsL080Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR007ncniR007Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR110ngnoR110Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR107ngnoR107Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G05210.1NO04G05210.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_101156g2gene1701Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G05210.1NO04G05210.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G05210 ID=NO04G05210|Name=NO04G05210|organism=Nannochloropsis oceanica|type=gene|length=2188bp
CTCCTACATGCGCTATCGCCCCGCCACGCCCCTAAACCCAACACGCAGCA
CATCCAATTACCACCGCACAACATCACACTGACACACATAGAGTAATAGC
TACGTTCTGCTGCCCTTGGTGCACCTATACGGGAGGACCGCTGCCTGTAC
TATTATTTTCGCCTCCATTTGCCTGCCGACTCCCTTGATTCAACTGATGA
TTCCCTGCGTCCGCCGCTCCGTACATCAGCGCCTCTACTCTACCCCCAGC
CACTTCAAGACAGCCAATCTCCGTCCCTACTTAGCTACCAACACCCCTTG
TGTTTGCTCCTACTCTTCGTCAACATCACCTCCCACTCCCCCAGCCCTCC
TGTCTTCCCTCTTCGACCGTGCCCCGTCCCCTCGTCCCCCTCTTTTCCCC
CTCCCCCCTTCTTCCATCTCCTTCCTCCGCGAGCCCTCCGAATTCTACCA
CACCCTCTTCGAGAGCATCAGTCGCTGTCGGGACCGCCTGACCCTCTCGG
CGCTCTACCTTGGACATGGCCCCATGGAACAAGCCCTCGTCCAGCACATC
ACCGCCGCTTGCGCCAAGTACCCCTCCCTGCAAGTCCACATCCTCCTCGA
TCATTCCCGCGGTACCCGCGGCCATAGTCATCACGCCTCCTCCCTTACGA
CCCTCGCCCCCCTCCTCTCCCTCCCCTCCTTTTCCTCCCCAAACGTCCGC
GTCTCCCTCTTCCGCATGCCCCAGCTTTCTGGCCCTCTTGCCCGACGCTT
CCTCCCAAGTCCTGTGAACGAAGCCGTGGCCGTCTCTCACGTCAAGGTCA
TGGCGTTTGACGACGAGGAGATCTTAATCACAGGAGCCAATTTATCGCAA
GATTATTTTACCACCAGGCAGGATCGCTACGTTCATATACGAGGGGGAGG
GGGAGGAGGAGGAAGAGAGGGAGGAAGGGGGGGAGGGCCGCCTGAGAGTC
TGGCTTGTTTCTACCACGAGTTAATTGAAACGCTAGGGCGTTATGCAGTC
TCCCCTCTCGTAGCTCTGAGTCAAGAACATCGGAGCGTCGTCGACTTCCA
AGCGCTCAAAACCGAACTAACGGACCTCTTTTCCTCCACTTCGCCCTCCC
TCCCTCCGTCTTTCTCGGACGAGCACGTCTGCTGGGCCATGCCCACCGTT
CAATGTGGCCCTCTGGGACTCCGACTTGACCAAACTCTCCTCCACGCCCT
CCTTTCCGCCTCCCCCTCCCCCTCCTCGGCCTCGCAGCACATGAGCCTTG
CCACGGCCTACCTCAACCCTCCCCTGTCCTTCCTCGAGGACCTACAGACG
TGGCAACAGGGAGGGACGGAGGAAGGGACAGAAGGAGGGCTCCAAGGAGA
GCAACAATGTAATGAAACGGGGAGGAAGAGAGGGAGGGAGAGAAGACATC
TGAGCATTCTATGTCCTTCGGCTGAGACGCACGGGTTCGCCGGTGCCCGA
GGCATCAAAGCCTTCATTCCCCTGGCATACGCCCTCCACGAACAGCGCGT
CCGCAAACACTTTCGCCCCTCCCTCCCTCCCTCCCTTCCTCTCTCCCTCT
ATCGATACACTCGCCCGGGCTGGACCTTCCATGGGAAGGGGCTGTGGCTG
CTTGAGGGGGAGGAAGAGGGGGAGGGAGGGAGGGAGGGAGAGGGGGTGGC
CTTGACGGTGGCGGGGAGTTCGAATTACGGGCATCGGTCGTTTGAGCGTG
ATTTGGAGTCGCAGGTGTGGCTGGTGAGCGCGGATGGAGGGCTGAAGGAG
AGGATGAGGGAGGAGAGGGCGTCCTTGCTTAGAGAGTGCTCTTCGGTAGG
GCAGGGGGAGGGAGGGAGGGAGGGAGGGGAGGAAGAGGAGGAAGCGCTGT
TGAGGGGTCATTGGAAGGTATGGGCCCCCACGTTGACGACGTGGACGCAG
GGGCTACTGTGAGGGAGGGAGCGAGGGAGGGGCAGAGGGAGGGAGGGAAG
GTGGGAGGGGTGGGACTGACATGGTGGATGATTTAAGACACTGAGAGTGA
AAGAGACAATCGATTGGAAGGAGAGTAACAAGATAATGACAGTAAAGAGA
GAGAGAGTAAAGAGAGAGTGCGCAGAGAGAGTAGAGAGAGGGAGAGTAGA
GAAAGAGGACTACAGGTGCGAGGAACAAATGCATATGTCAACAACCTTAG
AAAACCCCAAAATACCACCAAATAAAGAAAGAAATTAA
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protein sequence of NO04G05210.1

>NO04G05210.1-protein ID=NO04G05210.1-protein|Name=NO04G05210.1|organism=Nannochloropsis oceanica|type=polypeptide|length=572bp
MIPCVRRSVHQRLYSTPSHFKTANLRPYLATNTPCVCSYSSSTSPPTPPA
LLSSLFDRAPSPRPPLFPLPPSSISFLREPSEFYHTLFESISRCRDRLTL
SALYLGHGPMEQALVQHITAACAKYPSLQVHILLDHSRGTRGHSHHASSL
TTLAPLLSLPSFSSPNVRVSLFRMPQLSGPLARRFLPSPVNEAVAVSHVK
VMAFDDEEILITGANLSQDYFTTRQDRYVHIRGGGGGGGREGGRGGGPPE
SLACFYHELIETLGRYAVSPLVALSQEHRSVVDFQALKTELTDLFSSTSP
SLPPSFSDEHVCWAMPTVQCGPLGLRLDQTLLHALLSASPSPSSASQHMS
LATAYLNPPLSFLEDLQTWQQGGTEEGTEGGLQGEQQCNETGRKRGRERR
HLSILCPSAETHGFAGARGIKAFIPLAYALHEQRVRKHFRPSLPPSLPLS
LYRYTRPGWTFHGKGLWLLEGEEEGEGGREGEGVALTVAGSSNYGHRSFE
RDLESQVWLVSADGGLKERMREERASLLRECSSVGQGEGGREGGEEEEEA
LLRGHWKVWAPTLTTWTQGLL*
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Synonyms
Publications