NO04G05050, NO04G05050 (gene) Nannochloropsis oceanica

Overview
NameNO04G05050
Unique NameNO04G05050
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1268
Alignment locationchr4:1407102..1408369 +

Link to JBrowse

Properties
Property NameValue
Description2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:1407102..1408369 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0046872metal ion binding
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0055114oxidation-reduction process
Vocabulary: INTERPRO
TermDefinition
IPR026992DIOX_N
IPR005123Oxoglu/Fe-dep_dioxygenase
Homology
BLAST of NO04G05050 vs. NCBI_GenBank
Match: EWM28929.1 (isopenicillin n synthase [Nannochloropsis gaditana])

HSP 1 Score: 436.0 bits (1120), Expect = 1.200e-118
Identity = 219/371 (59.03%), Postives = 259/371 (69.81%), Query Frame = 0
Query:   18 AGRPPATEAAYPTSSPLPIIDLTRPSLPALRRACETYGFFYLQGHDISPSLLRAALRECRSFFALPLATKQTLTYADHSQGYQALGTETLNKNEQSQPCTQEGFRLNLTPPSSTQPWPDATLLPHFRPVLEEYHAAMEEVAHRVTRLLQASVGLPPSYLHEDQKAFSPHASAVTRLLHYSPVVSRVEEGVFGCGSHTDWGVLTLLLTEEEGLEVLCPREGGRGEREWLRVPPCR-------EMKDDATEEGGEKKVSE-------------EEEWLLICNLGDLLQRWTNDCLQSTPHRVVNRDGKERYSVPFFFTANPAAVVECXXXXXXXXXXXXXXXXXXXXXXXXXXXPPIVVSDYIAQKYRSVTEG 369
            A  P    A   TSS  P+IDLT+PSL  LR AC+TYGFFY++GH + PSLL+AALR+CR+FFALPL  KQ L   DHSQGYQALGTE LN  EQ+QPCTQEGFRL LTPPSS QPWP  +LL  FRPVLEEYHAAME VAHRV RL+ +S+GLPP YLH+   AF P A+A TRLLHY+P+ S VE+GVFGCG+HTDWG LTLLLTE+EGLEV+C  EGG G   W+RVPPC+       ++K D      EK  S+             E EWLLICNLGDLLQRWTND L+STPHRVVNR+GK+R+S+PFFF+A+P AVVEC                           PPI+VS+Y+A++ R+ T G
Sbjct:    2 ASSPQVPLAGGITSSSFPVIDLTQPSLSNLREACKTYGFFYIKGHGVKPSLLQAALRQCRAFFALPLPQKQALAGRDHSQGYQALGTEKLNHKEQTQPCTQEGFRLLLTPPSSDQPWPAPSLLHDFRPVLEEYHAAMESVAHRVLRLIVSSIGLPPDYLHDKIHAFHPQAAATTRLLHYAPIPSSVEDGVFGCGAHTDWGCLTLLLTEDEGLEVVCRPEGGEG-GTWVRVPPCQSPGGERGKVKRDIRPGSREKAWSDGSQAGAEACGQGVESEWLLICNLGDLLQRWTNDFLRSTPHRVVNREGKDRFSIPFFFSASPTAVVECLPPFRGIGLKNGVQEEDDGKSRDGGKYPPILVSEYVAERLRTATVG 371          
BLAST of NO04G05050 vs. NCBI_GenBank
Match: GAQ82514.1 (hypothetical protein KFL_001140020 [Klebsormidium nitens])

HSP 1 Score: 198.4 bits (503), Expect = 4.200e-47
Identity = 121/355 (34.08%), Postives = 183/355 (51.55%), Query Frame = 0
Query:   30 TSSPLPIIDL----TRPSL-PALRRACETYGFFYLQGHDISPSLLRAALRECRSFFALPLATKQTLTYADHSQGYQALGTETLNKNEQSQPCTQEGFRLN----LTPPSSTQP------WPDATLLPHFRPVLEEYHAAMEEVAHRVTRLLQASVGLPPSYLHEDQKAFSPHASAVTRLLHYSPVVSRVEEGVFGCGSHTDWGVLTLLLTEE-EGLEVLCPREGGRGEREWLRVPPCREMKDDATEEGGEKKVSEEEEWLLICNLGDLLQRWTNDCLQSTPHRVVNRDGKERYSVPFFFTANPAAVVECXXXXXXXXXXXXXXXXXXXXXXXXXXXPPIVVSDYIAQKYRSVTEG 369
            ++S +P+I L    T+ S+  A+R AC   GFFY+  H +  SL++AA  +C  FF LP   K+      +++GY  L  + L+ + Q++  T+EG+ +     L  P +++P      WPD  LLP +RP +E Y AAM ++A ++T  +  ++GLP  +  +     +P    V RLLHY+   S  EEGVFG G+H+DWG+LTLL T+   GL++   ++     + WL VPP                     E   I N+GD+L+RW+ND  +ST HRVV R G+ER+S+PFFF  N   +VEC                           PP+ V +Y+  K +S   G
Sbjct:    7 SASQVPVISLADGQTKASVAAAIREACTNLGFFYVSDHGVDESLVQAAFEQCCLFFNLPEEKKRKCLQDSNNRGYTPLAEQMLDASRQTRGDTKEGYYMGREVPLDHPDASKPLHGPNVWPDPALLPDWRPTMERYQAAMIQLALKLTDFIGLALGLPEGFFKKPGMFDNP--MTVLRLLHYTEEKSAPEEGVFGAGAHSDWGMLTLLKTDSVPGLQICLEKDA--ENQTWLDVPPV--------------------EGAFIVNIGDMLERWSNDLFRSTLHRVVGR-GQERFSIPFFFEPNFDCLVEC--------------LPQCCSPSNPAKYPPVTVGEYLMGKLKSTHAG 322          
BLAST of NO04G05050 vs. NCBI_GenBank
Match: CBJ26610.1 (Gibberellin 2-beta-dioxygenase [Ectocarpus siliculosus])

HSP 1 Score: 191.4 bits (485), Expect = 5.100e-45
Identity = 119/343 (34.69%), Postives = 170/343 (49.56%), Query Frame = 0
Query:   35 PIIDLTRPSLP-ALRRACETYGFFYLQGHDISPSLLRAALRECRSFFALPLATKQTLTYADHSQGYQALGTETLNKNEQSQPCTQEGFRL--NLTPPSSTQ-----------PWPDATLLPHFRPVLEEYHAAMEEVAHRVTRLLQASVGLPPSYLHEDQKAFSPHASAVTRLLHYSPVVSRVEEGVFGCGSHTDWGVLTLLLTEE-EGLEVLCPREGGRGEREWLRVPPCREMKDDATEEGGEKKVSEEEEWLLICNLGDLLQRWTNDCLQSTPHRVVNRDGKERYSVPFFFTANPAAVVECXXXXXXXXXXXXXXXXXXXXXXXXXXXPPIVVSDYIAQKY 363
            P++D+  P  P  L +AC+  GFFY++ H +S   +R   R+ ++FF+L +  K  +    H++G+  +  E L+ ++Q +  T+EG+ +   L  PS  +            WP   L+P +R  ++ Y   M  V  R++ LL   +GL PS+    +   S  A A+ RLLHYS  VS   +GV G G+H+D+G+LTLL T+E  GL+V       R + EWL VPP                     E   ICNLGD+LQRWTND L+ST HRVVN+ G+ERYS+PFFF  N    V C                           PP+    YI  KY
Sbjct:    5 PVVDMESPEAPKVLAKACKDVGFFYVENHGVSKDAMREVFRQSKAFFSLGIDDKMAVKADRHNRGFTPMHEEILDPSKQVKGDTKEGYYIFRELPTPSDGEEDAARPLKGPNQWPSEDLVPGWRATMQSYFTTMHAVGVRLSGLLSVGLGLDPSFF---ESCTSEMAHAL-RLLHYSAEVSDPAKGVMGAGAHSDYGLLTLLATDEVPGLQV-------RLDGEWLDVPP--------------------REGAFICNLGDMLQRWTNDELRSTVHRVVNKLGRERYSIPFFFELNFDTEVVC--------------LPQCCSEENPAKYPPVTAGSYILNKY 302          
BLAST of NO04G05050 vs. NCBI_GenBank
Match: CBJ26611.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 186.4 bits (472), Expect = 1.600e-43
Identity = 108/305 (35.41%), Postives = 159/305 (52.13%), Query Frame = 0
Query:   35 PIIDLTRPSLPA-LRRACETYGFFYLQGHDISPSLLRAALRECRSFFALPLATKQTLTYADHSQGYQALGTETLNKNEQSQPCTQEGFRL---------------NLTPPSSTQPWPDATLLPHFRPVLEEYHAAMEEVAHRVTRLLQASVGLPPSYLHEDQKAFSPHASAVTRLLHYSPVVSRVEEGVFGCGSHTDWGVLTLLLTEE-EGLEVLCPREGGRGEREWLRVPPCREMKDDATEEGGEKKVSEEEEWLLICNLGDLLQRWTNDCLQSTPHRVVNRDGKERYSVPFFFTANPAAVVEC 323
            P++D+   S PA L +AC  +GFFY++ H +S  ++R   R+ + FF+L +  K ++    +++GY  +  + L+   Q++  T+EG+ +               +  P S    WP   L+P ++  ++E+   M  V  R+  LL   +GL P+        FS  A  + RLLHYS  VS   +GV G G+HTDWG++TLL T+E  GL+V       R   +WL +PP                     +   ICNLGD+LQRWTND L+ST HRVVN+ G ERYS+PFFF  N    V C
Sbjct:    5 PVVDMDSSSAPAVLAKACRDFGFFYVENHGVSEEVMREVFRQSKLFFSLGMDDKMSVRADKNNRGYTPMHEQVLDLENQTKGDTKEGYYIFREGSAGAAADGEHDDARPLSGPNQWPSEELVPGWKTTMQEHFVRMHAVGERLAGLLSVGLGLDPAVF---GTCFSEFAHTL-RLLHYSAEVSDPGKGVMGAGAHTDWGLMTLLATDEVPGLQV-------RLNGKWLDIPP--------------------RKGAFICNLGDMLQRWTNDDLRSTVHRVVNKLGLERYSIPFFFEPNFDTEVAC 278          
BLAST of NO04G05050 vs. NCBI_GenBank
Match: GAQ89396.1 (2-oxoacid-dependent dioxygenase [Klebsormidium nitens])

HSP 1 Score: 185.7 bits (470), Expect = 2.800e-43
Identity = 108/310 (34.84%), Postives = 164/310 (52.90%), Query Frame = 0
Query:   29 PTSSPLPIIDLTRPS-----LPALRRACETYGFFYLQGHDISPSLLRAALRECRSFFALPLATKQTLTYADHSQGYQALGTETLNKNEQSQPCTQEGFRLN----LTPPSSTQP------WPDATLLPHFRPVLEEYHAAMEEVAHRVTRLLQASVGLPPSYLHEDQKAFSPHASAVTRLLHYSPVVSRVEEGVFGCGSHTDWGVLTLLLTEE-EGLEVLCPREGGRGEREWLRVPPCREMKDDATEEGGEKKVSEEEEWLLICNLGDLLQRWTNDCLQSTPHRVVNRDGKERYSVPFFFTANPAAVVEC 323
            P+ S +P+I L+          A++ AC   GFFY+  H +   L++A   +CR FF+LP A K       +++GY     ETL+   Q +  T+EG+ +     L  P ++ P      WPD  +LP +RP +E Y AAM  +A R+TRL+  ++GLP  +   D+             LHY+   S  E+G+FG G+H+D+G+LTLL T++  GL++   ++     ++W+ VPP                         I NLGD+L+RW+ND  +ST HRV+ R G+ERYS+PFFF  N   +VEC
Sbjct:    7 PSPSEVPVISLSGGQDQSRIAAAIKEACVKSGFFYVADHGVDEGLVQATFEQCRLFFSLPEAEKMKYLQDSNNRGYTPFEEETLDVTRQKKGDTKEGYYIGREVPLDHPDASTPLCGPNVWPDPDVLPLWRPTMERYMAAMTALALRLTRLIGLALGLPDGFF--DRPXXXXXXXXXXXXLHYNAEPSAPEDGIFGAGAHSDYGMLTLLKTDDVPGLQICLEKDA--KVQQWIDVPPV--------------------PGAFIVNLGDMLERWSNDRFRSTLHRVIGR-GQERYSIPFFFEPNFDCLVEC 291          
BLAST of NO04G05050 vs. NCBI_GenBank
Match: XP_002176333.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC42725.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 182.2 bits (461), Expect = 3.100e-42
Identity = 111/294 (37.76%), Postives = 151/294 (51.36%), Query Frame = 0
Query:   47 LRRACETYGFFYLQGHDISPSLLRAALRECRSFFALPLATKQTLTYADHSQGYQALGTETLNKNEQSQPCTQEGFRLNL----TPPS-------STQPWPDATLLP------HFRPVLEEYHAAMEEVAHRVTRLLQASVGLPPSYLHEDQKAFSPHASAVTRLLHYSPVVSRVEEGVFGCGSHTDWGVLTLLLTEE-EGLEVLCPREGGRGEREWLRVPPCREMKDDATEEGGEKKVSEEEEWLLICNLGDLLQRWTNDCLQSTPHRVVNRDGKERYSVPFFFTANPAAVVEC 323
            +R AC   GFFYL+GH I  S+    L + +SFF LPLA+K+ L+    S+GY  +  ETL+ + QS+  T+EGF +      T P            WPD  L         FR  +E Y   +  VA RV +LL  ++G+   Y      +FS    AV RLLHYS   SR E+G+F CG+H+D+G++TLLLT+   GL++         +  WL  PP                        L+ NLGD+L+RWTN   +ST HRV+   G ERYS+PFF+  N   VVEC
Sbjct:   32 IRHACMNVGFFYLEGHGIEQSMFDTVLAQSKSFFGLPLASKRALSDKVMSRGYTGMEEETLDPSSQSKGDTKEGFYIGREIYPTDPQYNPAKFCGPNQWPDELLCSTHIECFSFRTTMELYFTTISAVALRVIQLLALAIGVDEHYF---DSSFS-DPLAVLRLLHYSGEPSRPEDGIFACGAHSDYGMITLLLTDSTPGLQIFTK------DNIWLDAPPV--------------------AGALVVNLGDMLERWTNGIFRSTKHRVLTAGGTERYSIPFFYEPNFDTVVEC 295          
BLAST of NO04G05050 vs. NCBI_GenBank
Match: XP_009518515.1 (hypothetical protein PHYSODRAFT_556079 [Phytophthora sojae] >EGZ23227.1 hypothetical protein PHYSODRAFT_556079 [Phytophthora sojae])

HSP 1 Score: 178.7 bits (452), Expect = 3.400e-41
Identity = 110/301 (36.54%), Postives = 153/301 (50.83%), Query Frame = 0
Query:   34 LPIIDLTRP-SLPALRRACETYGFFYLQGHDISPSLLRAALRECRSFFALPLATKQTLTYADHSQGYQALGTETLNKNEQSQPCTQEGFRL-NLTPPSSTQ---------PWPDATLLPHFRPVLEEYHAAMEEVAHRVTRLLQASVGLPPSYLHEDQKAFSPHASAVTRLLHYSPVVSRVEEGVFGCGSHTDWGVLTLLLTEEE-GLEVLCPREGGRGEREWLRVPPCREMKDDATEEGGEKKVSEEEEWLLICNLGDLLQRWTNDCLQSTPHRVVNRDGKERYSVPFFFTANPAAVVEC 323
            +P +D + P +   LRRAC   GFFYL  H I  +LL     E R+FF  PL  K+ +   +  +GY  +  ETL+   Q++  T+EG+ +    PP S +          +PDA   P F+  +E YHAAM  +  RV +L   + G    +   D         A  RLLHY+P  S V  GVFG G+HTD+G++TLL T+   GL++       R E +W+ VPP  E                      + N+GD+ +R+TN   +ST HRVVN  G+ERYSVPFF+  N   VVEC
Sbjct:    4 IPEVDFSSPDAAEQLRRACTDVGFFYLAHHGIPAALLAQVYAEMRAFFGQPLEEKRKVLANEQMRGYTLMNEETLDPAVQTRGDTKEGYYICRHVPPDSDEMRLPLHGPNVFPDAAAFPTFQATMETYHAAMCALGFRVAQLFAEAAGHKGRF---DGPGMFDKPMAALRLLHYAPEKSDVARGVFGAGAHTDYGLITLLSTDATGGLQI-------RHEGQWVDVPPRAE--------------------AFVVNIGDMAERFTNGRFKSTLHRVVNTSGQERYSVPFFYEPNFTCVVEC 274          
BLAST of NO04G05050 vs. NCBI_GenBank
Match: XP_008607134.1 (hypothetical protein SDRG_03281 [Saprolegnia diclina VS20] >EQC39073.1 hypothetical protein SDRG_03281 [Saprolegnia diclina VS20])

HSP 1 Score: 178.7 bits (452), Expect = 3.400e-41
Identity = 107/299 (35.79%), Postives = 150/299 (50.17%), Query Frame = 0
Query:   34 LPIID-LTRPSLPALRRACETYGFFYLQGHDISPSLLRAALRECRSFFALPLATKQTLTYADHSQGYQALGTETLNKNEQSQPCTQEGFRLNLTPP--------SSTQPWPDATLLPHFRPVLEEYHAAMEEVAHRVTRLLQASVGLPPSYLHEDQKAFSPHASAVTRLLHYSPVVSRVEEGVFGCGSHTDWGVLTLLLTEEE-GLEVLCPREGGRGEREWLRVPPCREMKDDATEEGGEKKVSEEEEWLLICNLGDLLQRWTNDCLQSTPHRVVNRDGKERYSVPFFFTANPAAVVEC 323
            +P++D     +   LR AC T GFFYL  H I  +LL     E   FF  P+  K+ +   +H +GY  +  ETL+   Q+Q  T+EG+ +   P              +PDA+  P FRP++ +Y  AM  +   V +L   + G P ++   D         A  RLLHYS   S V+ GVFG G+H+D+G+LTLL T+++ GLE+         +  W+ VPP  +                      I N+GDL +RWTN   +ST HRVVNR G+ERYSVPFF+  N   VV C
Sbjct:    4 IPVVDGFASDASTQLRHACTTVGFFYLSNHGIPAALLDDVYAEMHHFFQQPVQEKRKVLANEHMRGYTPMSEETLDPAVQTQGDTKEGYYICREPVPEDYGLPLHGPNVFPDASTHPRFRPIMTKYFDAMSALGWHVAQLFAEAAGAPGAF---DGPGMFDRPMAALRLLHYSDHKSDVDGGVFGAGAHSDYGLLTLLSTDDQSGLEI-------ELQGRWVAVPPRAD--------------------CFIVNIGDLGERWTNGLFKSTRHRVVNRVGRERYSVPFFYEPNFTCVVSC 272          
BLAST of NO04G05050 vs. NCBI_GenBank
Match: XP_005854959.1 (hypothetical protein NGA_0379600 [Nannochloropsis gaditana CCMP526] >EKU21399.1 hypothetical protein NGA_0379600 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 176.8 bits (447), Expect = 1.300e-40
Identity = 112/309 (36.25%), Postives = 154/309 (49.84%), Query Frame = 0
Query:   34 LPIIDLTRP--SLPALRRACETYGFFYLQGHDISPSLLRAALRECRSFFALPLATKQTLTYADH--SQGYQALGTETLNKNEQSQPCTQEGFRLNLT-----------PPSSTQPWPDATLLPHFRPVLEEYHAAMEEVAHRVTRLLQASVGLPPSYLHEDQKAFSPHASAVTRLLHYSPVVSRVEEGVFGCGSHTDWGVLTLLLTEE-EGLEVLCPREGGRGERE--WLRVPPCREMKDDATEEGGEKKVSEEEEWLLICNLGDLLQRWTNDCLQSTPHRVVNRDGKE--RYSVPFFFTANPAAVVEC 323
            LPI+DL  P  +   L  AC  +GFFYL  H +  +L+   L E ++FF+LPL  K+ ++   +  ++GY A   ETL+   Q++  T+EGF L              P      WPD   LP +RPV+  Y  A+  +  R  RLL  ++GLP  +L +          A  RLLHYS   S   EGV+  G+HTD+G+ T L+T+   GL+V     GG G+ +  W  VP                      E   I NLGD+LQRWTND  +ST HRVV ++  E  RYS PFF+  N   +V C
Sbjct:   22 LPIVDLAAPEEAPRILYDACRDFGFFYLINHGVPQALIDDMLTESKAFFSLPLDEKEKVSVRHNKINRGYTAFEEETLDPTRQTRGDTKEGFYLGREVAMESEEARSFPLHGPNVWPDPVKLPRWRPVMNAYFTALSSLGLRTVRLLLRALGLPEHHLDDT----FTRPMAALRLLHYSTQASNPSEGVYAAGAHTDYGMFTFLMTDHTPGLQVW---RGGAGQEDGSWQEVPAV--------------------EGAFIVNLGDMLQRWTNDVFKSTAHRVVIQEATEEGRYSAPFFYEPNFDTLVAC 303          
BLAST of NO04G05050 vs. NCBI_GenBank
Match: XP_008894881.1 (hypothetical protein PPTG_04392 [Phytophthora parasitica INRA-310] >ETN18951.1 hypothetical protein PPTG_04392 [Phytophthora parasitica INRA-310])

HSP 1 Score: 176.8 bits (447), Expect = 1.300e-40
Identity = 106/300 (35.33%), Postives = 150/300 (50.00%), Query Frame = 0
Query:   34 LPIIDLTRP-SLPALRRACETYGFFYLQGHDISPSLLRAALRECRSFFALPLATKQTLTYADHSQGYQALGTETLNKNEQSQPCTQEGFRLNLTPPSSTQP----------WPDATLLPHFRPVLEEYHAAMEEVAHRVTRLLQASVGLPPSYLHEDQKAFSPHASAVTRLLHYSPVVSRVEEGVFGCGSHTDWGVLTLLLTEEEGLEVLCPREGGRGEREWLRVPPCREMKDDATEEGGEKKVSEEEEWLLICNLGDLLQRWTNDCLQSTPHRVVNRDGKERYSVPFFFTANPAAVVEC 323
            +P +D   P +   LRRAC   GFFYL  H I  +L     +E  +FF+ PL  KQ +    + +GY  +  ETL+   Q++  T+EG+ +    P  +            +PD    P F+  +E+YH AM E+   V +L   + G    +   D         A  RLLHY+P  S V+ GVFG G+HTD+G++TLL T+  G   +C       E +W+ VPP    +DDA                 + N+GD+ +R+TN   +ST HRVVN  GKERYSVPFF+  N    VEC
Sbjct:    4 IPEVDFCSPNAAEQLRRACTDVGFFYLVNHGIPDTLKAQVYKEMATFFSQPLEEKQKVLANKYMRGYTLMNEETLDPTVQTRGDTKEGYYICRHVPLDSDEMKLPLHGPNVFPDKAKFPTFQETMEKYHVAMCELGFNVAKLFAEAAGQKGKF---DGPGMFDKPMAALRLLHYAPEKSDVDNGVFGAGAHTDYGLITLLSTDMTGGLQIC------HEGKWVDVPP----RDDA----------------FVVNIGDMAERFTNGIFKSTLHRVVNASGKERYSVPFFYEPNFTCQVEC 274          
The following BLAST results are available for this feature:
BLAST of NO04G05050 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28929.11.200e-11859.03isopenicillin n synthase [Nannochloropsis gaditana... [more]
GAQ82514.14.200e-4734.08hypothetical protein KFL_001140020 [Klebsormidium ... [more]
CBJ26610.15.100e-4534.69Gibberellin 2-beta-dioxygenase [Ectocarpus silicul... [more]
CBJ26611.11.600e-4335.41conserved unknown protein [Ectocarpus siliculosus][more]
GAQ89396.12.800e-4334.842-oxoacid-dependent dioxygenase [Klebsormidium nit... [more]
XP_002176333.13.100e-4237.76predicted protein [Phaeodactylum tricornutum CCAP ... [more]
XP_009518515.13.400e-4136.54hypothetical protein PHYSODRAFT_556079 [Phytophtho... [more]
XP_008607134.13.400e-4135.79hypothetical protein SDRG_03281 [Saprolegnia dicli... [more]
XP_005854959.11.300e-4036.25hypothetical protein NGA_0379600 [Nannochloropsis ... [more]
XP_008894881.11.300e-4035.33hypothetical protein PPTG_04392 [Phytophthora para... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL080nonsL080Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL075nonsL075Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR058ncniR058Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR110ngnoR110Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR107ngnoR107Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007611NSK007611Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G05050.1NO04G05050.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|299818gene_2297Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100142g9gene1680Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G05050.1NO04G05050.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G05050 ID=NO04G05050|Name=NO04G05050|organism=Nannochloropsis oceanica|type=gene|length=1268bp
CTCTAAAACCGGCGATCGACCTAATCCGCTATCTGAAATTTCATTCCCCC
TCTCAACACAAAAACAAAAGCAACAGACATGAAGTCACCAGGACCAACGG
CAGCTCAAGTTCTTGAAGGGGAAGCAGGTGCAGGGAGGCCACCAGCCACG
GAAGCCGCTTACCCAACCTCCTCCCCTCTTCCCATCATTGACCTAACACG
CCCGTCCCTCCCTGCCCTCCGCCGTGCCTGCGAGACCTACGGCTTCTTCT
ATCTACAAGGCCATGACATATCTCCTTCTCTTCTCCGGGCGGCTCTGCGT
GAATGCCGAAGTTTTTTTGCCCTTCCCCTGGCAACCAAACAAACTCTGAC
ATACGCCGATCACAGCCAGGGCTACCAAGCGCTCGGCACCGAGACGCTCA
ATAAGAATGAGCAAAGCCAGCCTTGCACGCAAGAAGGCTTCCGACTCAAC
CTCACGCCTCCTTCTTCTACTCAACCCTGGCCCGATGCCACCCTTCTTCC
TCATTTCCGGCCGGTGTTGGAGGAGTACCACGCAGCAATGGAAGAAGTGG
CACATCGTGTGACACGCCTCCTGCAGGCCTCTGTGGGCTTGCCGCCCTCT
TACCTTCACGAGGACCAAAAAGCATTCTCTCCGCACGCATCGGCGGTAAC
CCGTTTATTGCATTATTCTCCTGTGGTGTCACGTGTGGAGGAGGGTGTTT
TTGGCTGTGGTTCACATACAGATTGGGGGGTACTGACGCTTTTGCTGACA
GAGGAGGAGGGGTTAGAGGTGCTATGCCCAAGGGAGGGAGGAAGAGGAGA
ACGAGAATGGCTGCGAGTTCCTCCGTGTCGGGAAATGAAGGATGATGCCA
CGGAAGAAGGAGGGGAAAAAAAAGTTAGTGAGGAAGAGGAGTGGCTTTTA
ATATGTAACTTGGGTGATCTCCTTCAGCGGTGGACGAACGATTGTTTGCA
GTCTACGCCTCATCGGGTGGTGAACCGAGATGGTAAAGAGAGGTATTCAG
TACCCTTTTTCTTCACGGCGAATCCAGCGGCAGTCGTGGAATGTCTGCCA
CCATTTGAGGAGGAGGAGGAGGAGGAGGGCGGCGAGGGAAAGAGAGAGGG
CGGGAGGAGGAAGGCAGGGAAATATCCCCCGATCGTGGTATCAGACTATA
TTGCGCAGAAATATAGGAGCGTCACAGAGGGGCTGGAGGAGACAGAGATA
GCGAACGGAGGCCAGAAGAGGGGGGGGGAGGAAAGAAAGTGATTTTGTGC
GTATGGGAAGGTGAGGAA
back to top

protein sequence of NO04G05050.1

>NO04G05050.1-protein ID=NO04G05050.1-protein|Name=NO04G05050.1|organism=Nannochloropsis oceanica|type=polypeptide|length=388bp
MKSPGPTAAQVLEGEAGAGRPPATEAAYPTSSPLPIIDLTRPSLPALRRA
CETYGFFYLQGHDISPSLLRAALRECRSFFALPLATKQTLTYADHSQGYQ
ALGTETLNKNEQSQPCTQEGFRLNLTPPSSTQPWPDATLLPHFRPVLEEY
HAAMEEVAHRVTRLLQASVGLPPSYLHEDQKAFSPHASAVTRLLHYSPVV
SRVEEGVFGCGSHTDWGVLTLLLTEEEGLEVLCPREGGRGEREWLRVPPC
REMKDDATEEGGEKKVSEEEEWLLICNLGDLLQRWTNDCLQSTPHRVVNR
DGKERYSVPFFFTANPAAVVECLPPFEEEEEEEGGEGKREGGRRKAGKYP
PIVVSDYIAQKYRSVTEGLEETEIANGGQKRGGEERK*
back to top
Synonyms
Publications