NO04G04820, NO04G04820 (gene) Nannochloropsis oceanica

Overview
NameNO04G04820
Unique NameNO04G04820
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2525
Alignment locationchr4:1316599..1319123 +

Link to JBrowse

Properties
Property NameValue
Description2-isopropylmalate synthase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:1316599..1319123 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0046873metal ion transmembrane transporter activity
GO:0016740transferase activity
GO:0005215transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0030001metal ion transport
GO:0009987cellular process
GO:0009058biosynthetic process
GO:0006810transport
Vocabulary: INTERPRO
TermDefinition
IPR001046NRAMP_fam
Homology
BLAST of NO04G04820 vs. NCBI_GenBank
Match: EWM28880.1 (2-isopropylmalate synthase [Nannochloropsis gaditana])

HSP 1 Score: 948.3 bits (2450), Expect = 1.200e-272
Identity = 496/640 (77.50%), Postives = 537/640 (83.91%), Query Frame = 0
Query:    2 SSDDENAVHTALVPTDATAXXXXXXXLL----PTSGEARRSLEELEADDPEYRETHTHPRPGHDHEKPPKSGIFSFLYAVEGGDPDGEVDVVHELEDEVG--EMGPGGHRVGAPCFSFRTLMSYTGPGFLMCIAYLDPGNLEADLQVGAYTGYDLLWMLALATFMGFALQCMAARLGVVTGKNLARVCKEHYSHAISMVLWVLIELAIIGNDLQEIIGSAIAFQILFGFPLWLGCLVTFIDTFTFLAIHYFGIRKLEGLFVVLVAIMTVCFFINFGKQPPPPGLIAEGFVPQIKPFAVLSAVGLIGAVIMPHNIYLHSALVLSRKVNRRKPAHVIEANKYFAIDSGIALLVSFVINLAVVSVFAYHFFDDGCANIVGGPLACLSRDAEGACICSTIGLAGAHDALADALGKSAKYIWGVGLLAAGQASTMTGTYAGQYVMEGFLDLKIPLWARVTFTRFVAIGPGLVVAILTENNQNLSDMFQEAINVFNSVLLSFALLPVLHFTSSSAIMGEHVSGLPLTVTIWSLAFMVLAINIYLVVLRIGGGQPWWMYVLTAIGGIIYLRFSYALVADDVVKGYWGVVEMMPEGWEVRRRLLERRKAREVEGGKEG--GGKGVIIVASGHHRLDNPLIESVSDGEG 634
            S D+E+AVHTALVP  +               P+S EA RSL+ELEADD EY +THTHPRPGHDHEKPP +GI SFLYA EGGDPD EVDVVH  ++E G  E  P       P FSFRTL+SYTGPGFLMCIAYLDPGNLEADLQVGAYTGYDLLWMLALATFMGFALQCMA RLGVVTGKNLARVCKE Y+ A SM LW+LIELAI+G DLQEI+GSAIAFQILFGFPLWLGCL+TFIDTFTFL IHYFG+RKLE +FV+LVAIMTVCFFINFGK PPP   IAEGFVPQI+P+AVLSAVGLIGAVIMPHNIYLHSALVLSRKV+RR+PAHV EANKYFAIDS IAL VSFVINLAVVSVFAYHFFD GCA   GGPLACLSR  EG C C  IGLAGAHDALA+ALGKSAKYIW VGLLAAGQASTMTGTYAGQYVMEGFLDL+IPLWARVTFTRFVAIGPGLVVAILTENNQNLSD FQEAINVFNSVLLSF+LLPVLHFTSSS IMGEHVS LPLT+TIW LAF VLAINIYLVVLRIG GQPWW+YV+TA+ G+IYL FSY+LV +D+  G W VVE +P GW ++RRLL  R+ R+V   KEG  GG G+  V+  H R    LIESV D +G
Sbjct:  785 SIDEEHAVHTALVPPTSAEVSIPSAGAASTAHPSSTEAMRSLQELEADDTEYSQTHTHPRPGHDHEKPPTAGILSFLYAFEGGDPDSEVDVVHAFQEEGGVPERKP-------PVFSFRTLLSYTGPGFLMCIAYLDPGNLEADLQVGAYTGYDLLWMLALATFMGFALQCMAVRLGVVTGKNLARVCKEQYNRATSMTLWILIELAIVGCDLQEIVGSAIAFQILFGFPLWLGCLITFIDTFTFLGIHYFGVRKLESVFVLLVAIMTVCFFINFGKSPPPSRDIAEGFVPQIRPYAVLSAVGLIGAVIMPHNIYLHSALVLSRKVDRRRPAHVKEANKYFAIDSAIALTVSFVINLAVVSVFAYHFFDHGCATAPGGPLACLSRTEEGVCDCQLIGLAGAHDALAEALGKSAKYIWAVGLLAAGQASTMTGTYAGQYVMEGFLDLQIPLWARVTFTRFVAIGPGLVVAILTENNQNLSDRFQEAINVFNSVLLSFSLLPVLHFTSSSVIMGEHVSSLPLTITIWVLAFGVLAINIYLVVLRIGAGQPWWVYVVTAVVGLIYLAFSYSLVQEDIENGAWAVVEGLPVGWPLKRRLLAWRERRKVR--KEGLIGGDGISNVSPKHQR----LIESVGDSDG 1411          
BLAST of NO04G04820 vs. NCBI_GenBank
Match: CBN78636.1 (divalent metal transporter [Ectocarpus siliculosus])

HSP 1 Score: 487.3 bits (1253), Expect = 7.400e-134
Identity = 258/477 (54.09%), Postives = 328/477 (68.76%), Query Frame = 0
Query:  115 TLMSYTGPGFLMCIAYLDPGNLEADLQVGAYTGYDLLWMLALATFMGFALQCMAARLGVVTGKNLARVCKEHYSHAISMVLWVLIELAIIGNDLQEIIGSAIAFQILFGFPLWLGCLVTFIDTFTFLAIHYFGIRKLEGLFVVLVAIMTVCFFINFGKQPPPPGLIAEGFVPQIKPFAVLSAVGLIGAVIMPHNIYLHSALVLSRKVNRRKPAHVIEANKYFAIDSGIALLVSFVINLAVVSVFAYHFFDDGCANIVGGPLACL-------------SRDAEGACICSTIGLAGAHDALADALGKSAKYIWGVGLLAAGQASTMTGTYAGQYVMEGFLDLKIPLWARVTFTRFVAIGPGLVVAILTENNQNLSDMFQEAINVFNSVLLSFALLPVLHFTSSSAIMGEHVSGLPLTVTIWSLAFMVLAINIYLVV-------LRIGGGQPWWMYVLTAIGGIIYLRFSYALVADDVVK 572
            TL +Y GPGFL+CIAYLDPGNLEADLQ GAYTGY LLW+L LA  +G  LQ +AAR+GVVTG +LA VC+ HY    +++LWV++E+AIIG+D+QE++GSAI  QILFG PLW+GCL+T +DTFTFL IH FG+RKLE LFVVLV+IMTV FFI+F   PP P  +AEGF    + +A + A+GLIGAVIMPHNIYLHSALVLSR V+R +P  + EA KY+ IDSGIAL+V+F+INLAVV  FA  F+D+ CA     P AC              S DA+G  +C  IGL+ A  AL   LG SAKY+W VGLLAAGQ+STMTGTYAGQ+VMEGFL LKIP W RV  TR +A+GP L V +    +   +D     +NV  S+ L FA++P+L F +S  +MGE      +T  +W ++  ++ INI +V+       +   G    W+Y  TAIG  +YL F   L+ +D+ K
Sbjct:   92 TLAAYVGPGFLVCIAYLDPGNLEADLQTGAYTGYQLLWVLLLAHILGLVLQSLAARIGVVTGTHLADVCRTHYDRPAALLLWVMMEVAIIGSDIQEVLGSAIGLQILFGIPLWVGCLLTALDTFTFLFIHVFGVRKLEALFVVLVSIMTVAFFIDFFMSPPSPADVAEGFSFTAESYATVPALGLIGAVIMPHNIYLHSALVLSRVVDRTRPRKLWEATKYYTIDSGIALMVAFMINLAVVCTFAKQFYDETCAT-ASEPSACFVGDSIDPTQPSYGSCDADGTGLCQEIGLSAAAAALRGTLGSSAKYVWAVGLLAAGQSSTMTGTYAGQFVMEGFLQLKIPKWQRVLVTRIIALGPALAVTVFMGGDIRATDRLSAWLNVLQSLQLPFAIIPLLTFCNSPHVMGEFTITSSMTAFVWMVSIGIIGINISIVLGFLFDEGISSEGAAAPWLYACTAIGASLYLGFILFLMREDLQK 567          
BLAST of NO04G04820 vs. NCBI_GenBank
Match: ETK94195.1 (hypothetical protein L915_02704 [Phytophthora parasitica] >ETL47586.1 hypothetical protein L916_02679 [Phytophthora parasitica] >ETP24156.1 hypothetical protein F441_02802 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 449.1 bits (1154), Expect = 2.200e-122
Identity = 259/521 (49.71%), Postives = 329/521 (63.15%), Query Frame = 0
Query:   96 VGEMGPGGHRVGAPCFSFRTLMSYTGPGFLMCIAYLDPGNLEADLQVGAYTGYDLLWMLALATFMGFALQCMAARLGVVTGKNLARVCKEHYSHAISMVLWVLIELAIIGNDLQEIIGSAIAFQILFGFPLWLGCLVTFIDTFTFLAIHYFGIRKLEGLFVVLVAIMTVCFFINFGKQPPPPGLIAEGFVPQIKPFAVLSAVGLIGAVIMPHNIYLHSALVLSRKVNRRKPAHVIEANKYFAIDSGIALLVSFVINLAVVSVFAYHFFDDGC--------ANIVGGPLACLSRDAEGAC--------ICSTIGLAGAHDALADALGKSAKYIWGVGLLAAGQASTMTGTYAGQYVMEGFLDLKIPLWARVTFTRFVAIGPGLVVAILTENNQNLSDMFQEAINVFNSVLLSFALLPVLHFTSSSAIMGEHVSGLPLTVTIWSLAFMVLAINIYLVVLRIGGGQPWWMYVLTAIGGIIYLRFSYALVADDVVKGYWGVVEMMPEGWEVRRRLLERRKAREVE 601
            VGE+           FS+RTL +Y GPG+LM IAY+DPGNLE+DLQ GAY GY L W+L  AT MG  LQ +AARLGVVTGKNLA +C   Y    S+ LW++ E+AI+G+D+QE++GS+IAFQ+LFGFPLW+GCL+T  DTFTFL +H +GIRKLE  FV L+ +M VCF  N  +     G +  GFVP++  +AV  AVG++GAVIMPHNI+LHSALV +R+VNR     V EANKYFAI+SG AL VSF+INLAV++VFA  FF   C         N    P A  S D  G C        +C  IGL+ A  AL+  LG+ A  IW +GLLAAGQ+STMTGTYAGQ+VMEGFL L +  W RV  TR V++ P + VAIL++ N   SD   E +NV  S+ L FALLPVL FTSSS IMG+  +     VT W L  +V  IN+YL+   + G     + ++ A+GG   L F +         GY    +M       R     RR +++VE
Sbjct:   41 VGEIQAPDEEPTTRGFSWRTLWAYAGPGWLMSIAYVDPGNLESDLQAGAYAGYQLTWVLFGATAMGLFLQVLAARLGVVTGKNLAEMCTAVYPRWASLTLWIMTEIAIVGSDIQEVLGSSIAFQVLFGFPLWIGCLITGFDTFTFLLLHRYGIRKLEAFFVSLIIVMLVCFCANLVRGEVASGDVLRGFVPRVDRYAVTQAVGILGAVIMPHNIFLHSALVQTRQVNRHDGRKVREANKYFAIESGFALFVSFLINLAVLAVFAKGFFSSDCTTSYDTNGVNTACVPGAIASGDTYGYCQLASGGEGMCQEIGLSQAGVALSGMLGQYADTIWAIGLLAAGQSSTMTGTYAGQFVMEGFLQLHLSPWKRVALTRCVSLVPAMTVAILSQQNPADSDHMDELLNVLQSIQLPFALLPVLIFTSSSEIMGDFANSKATVVTGWLLGGLVCVINLYLLFTNLEGLALGGIGIV-ALGGTCCLYFGFL--------GYLVRADMTLSAQRARTASSSRRISQDVE 552          
BLAST of NO04G04820 vs. NCBI_GenBank
Match: XP_009536103.1 (hypothetical protein PHYSODRAFT_527737 [Phytophthora sojae] >EGZ07931.1 hypothetical protein PHYSODRAFT_527737 [Phytophthora sojae])

HSP 1 Score: 448.7 bits (1153), Expect = 2.900e-122
Identity = 252/486 (51.85%), Postives = 318/486 (65.43%), Query Frame = 0
Query:   93 EDEVGEMGPGGHRVGAPCFSFRTLMSYTGPGFLMCIAYLDPGNLEADLQVGAYTGYDLLWMLALATFMGFALQCMAARLGVVTGKNLARVCKEHYSHAISMVLWVLIELAIIGNDLQEIIGSAIAFQILFGFPLWLGCLVTFIDTFTFLAIHYFGIRKLEGLFVVLVAIMTVCFFINFGKQPPPPGLIAEGFVPQIKPFAVLSAVGLIGAVIMPHNIYLHSALVLSRKVNRRKPAHVIEANKYFAIDSGIALLVSFVINLAVVSVFAYHFFDDGC--------ANIVGGPLACLSRDAEGAC--------ICSTIGLAGAHDALADALGKSAKYIWGVGLLAAGQASTMTGTYAGQYVMEGFLDLKIPLWARVTFTRFVAIGPGLVVAILTENNQNLSDMFQEAINVFNSVLLSFALLPVLHFTSSSAIMGEHVSGLPLTVTIWSLAFMVLAINIYLVVLRIGGGQPWWMYVLTAIGGIIYLRFSY 563
            E +  + GP  H      FS+RTL +Y GPG+LM IAY+DPGNLE+DLQ GAY GY L W+L  AT MGF LQ +AARLGVVTGKNLA +C   Y    S+ LW++ E+AI+G+D+QE++GS+IAFQ+LFGFPLW+GCL+T  DTFTFL +H +GIRKLE  FV L+ +M VCF  N  +       +  GFVP++  +AV  AVG++GAVIMPHNI+LHSALV +R+VNR     V EANKYFAI+SG+AL VSF+INLAV++VFA  FF   C         N    P A  S D  G C        +C  IGL+ A  AL+  LG+ A  IW +GLLAAGQ+STMTGTYAGQ+VMEGFL L +  W RV  TR V++ P + VAIL++ N   SD   E +NV  S+ L FALLPVL FTSS +IMG+  +     VT W L  +V  IN+YL+   +  G       L A+GG   L F +
Sbjct:   45 EVQAPDEGPTQHG-----FSWRTLWAYAGPGWLMSIAYVDPGNLESDLQAGAYAGYQLTWVLFGATAMGFFLQVLAARLGVVTGKNLAEMCTAAYPRWASLTLWIMTEIAIVGSDVQEVLGSSIAFQVLFGFPLWVGCLITGFDTFTFLLLHRYGIRKLEAFFVSLIVVMLVCFCANLVRGEVASADVVSGFVPRVDRYAVTQAVGILGAVIMPHNIFLHSALVQTRQVNRHDGRKVHEANKYFAIESGLALFVSFLINLAVLAVFAKGFFSSDCTTSYTTSGVNTACVPGAIASGDTYGHCQLASGGEGMCQEIGLSQAGVALSGMLGEYADTIWAIGLLAAGQSSTMTGTYAGQFVMEGFLQLHLSPWKRVALTRCVSLVPAMTVAILSQQNPADSDHMDELLNVLQSIQLPFALLPVLIFTSSPSIMGDFANSRATVVTGWLLGGLVCVINLYLIFTNL-EGLALGAVGLVALGGTCCLYFGF 524          
BLAST of NO04G04820 vs. NCBI_GenBank
Match: ETI54351.1 (hypothetical protein F443_02814 [Phytophthora parasitica P1569] >ETM53859.1 hypothetical protein L914_02700 [Phytophthora parasitica] >ETO83095.1 hypothetical protein F444_02826 [Phytophthora parasitica P1976] >ETP52148.1 hypothetical protein F442_02798 [Phytophthora parasitica P10297])

HSP 1 Score: 446.0 bits (1146), Expect = 1.900e-121
Identity = 258/521 (49.52%), Postives = 328/521 (62.96%), Query Frame = 0
Query:   96 VGEMGPGGHRVGAPCFSFRTLMSYTGPGFLMCIAYLDPGNLEADLQVGAYTGYDLLWMLALATFMGFALQCMAARLGVVTGKNLARVCKEHYSHAISMVLWVLIELAIIGNDLQEIIGSAIAFQILFGFPLWLGCLVTFIDTFTFLAIHYFGIRKLEGLFVVLVAIMTVCFFINFGKQPPPPGLIAEGFVPQIKPFAVLSAVGLIGAVIMPHNIYLHSALVLSRKVNRRKPAHVIEANKYFAIDSGIALLVSFVINLAVVSVFAYHFFDDGC--------ANIVGGPLACLSRDAEGAC--------ICSTIGLAGAHDALADALGKSAKYIWGVGLLAAGQASTMTGTYAGQYVMEGFLDLKIPLWARVTFTRFVAIGPGLVVAILTENNQNLSDMFQEAINVFNSVLLSFALLPVLHFTSSSAIMGEHVSGLPLTVTIWSLAFMVLAINIYLVVLRIGGGQPWWMYVLTAIGGIIYLRFSYALVADDVVKGYWGVVEMMPEGWEVRRRLLERRKAREVE 601
            VGE+           FS+RTL +Y GPG+LM IAY+DPGNLE+DLQ GAY GY L W+L  AT MG  LQ +AARLGVVTGKNLA +C   Y    S+ LW++ E+AI+G+D+QE++GS+IAFQ+LFGFPLW+GCL+T  DTFTFL +H +GIRKLE  FV L+ +M VCF  N  +       +  GFVP++  +AV  AVG++GAVIMPHNI+LHSALV +R+VNR     V EANKYFAI+SG AL VSF+INLAV++VFA  FF   C         N    P A  S D  G C        +C  IGL+ A  AL+  LG+ A  IW +GLLAAGQ+STMTGTYAGQ+VMEGFL L +  W RV  TR V++ P + VAIL++ N   SD   E +NV  S+ L FALLPVL FTSSS IMG+  +     VT W L  +V  IN+YL+   + G     + ++ A+GG   L F +         GY    +M       R     RR +++VE
Sbjct:   41 VGEIQAPDEEPTTRGFSWRTLWAYAGPGWLMSIAYVDPGNLESDLQAGAYAGYQLTWVLFGATAMGLFLQVLAARLGVVTGKNLAEMCTAVYPRWASLTLWIMTEIAIVGSDIQEVLGSSIAFQVLFGFPLWIGCLITGFDTFTFLLLHRYGIRKLEAFFVSLIIVMLVCFCANLVRGEVASEDVLRGFVPRVDRYAVTQAVGILGAVIMPHNIFLHSALVQTRQVNRHDGRKVREANKYFAIESGFALFVSFLINLAVLAVFAKGFFSSDCTTSYDTNGVNTACVPGAIASGDTYGYCQLASGGEGMCQEIGLSQAGVALSGMLGQYADTIWAIGLLAAGQSSTMTGTYAGQFVMEGFLQLHLSPWKRVALTRCVSLVPAMTVAILSQQNPADSDHMDELLNVLQSIQLPFALLPVLIFTSSSEIMGDFANSKATVVTGWLLGGLVCVINLYLLFTNLEGLALGGIGIV-ALGGTCCLYFGFL--------GYLVRADMTLSAQRARTASSSRRISQDVE 552          
BLAST of NO04G04820 vs. NCBI_GenBank
Match: ETM00675.1 (hypothetical protein L917_02619 [Phytophthora parasitica])

HSP 1 Score: 444.5 bits (1142), Expect = 5.500e-121
Identity = 258/521 (49.52%), Postives = 330/521 (63.34%), Query Frame = 0
Query:   96 VGEMGPGGHRVGAPCFSFRTLMSYTGPGFLMCIAYLDPGNLEADLQVGAYTGYDLLWMLALATFMGFALQCMAARLGVVTGKNLARVCKEHYSHAISMVLWVLIELAIIGNDLQEIIGSAIAFQILFGFPLWLGCLVTFIDTFTFLAIHYFGIRKLEGLFVVLVAIMTVCFFINFGKQPPPPGLIAEGFVPQIKPFAVLSAVGLIGAVIMPHNIYLHSALVLSRKVNRRKPAHVIEANKYFAIDSGIALLVSFVINLAVVSVFAYHFFDDGCA---NIVGGPLACL-----SRDAEGAC--------ICSTIGLAGAHDALADALGKSAKYIWGVGLLAAGQASTMTGTYAGQYVMEGFLDLKIPLWARVTFTRFVAIGPGLVVAILTENNQNLSDMFQEAINVFNSVLLSFALLPVLHFTSSSAIMGEHVSGLPLTVTIWSLAFMVLAINIYLVVLRIGGGQPWWMYVLTAIGGIIYLRFSYALVADDVVKGYWGVVEMMPEGWEVRRRLLERRKAREVE 601
            VGE+           FS+RTL +Y GPG+LM IAY+DPGNLE+DLQ GAY GY L W+L  AT MG  LQ +AARLGVVTGKNLA +C   Y    S+ LW++ E+AI+G+D+QE++GS+IAFQ+LFGFPLW+GCL+T  DTFTFL +H +GIRKLE  FV L+ +M VCF  N  +       +  GFVP++  +AV  AVG++GAVIMPHNI+LHSALV +R+VNR     V EANKYFAI+SG AL VSF+INLAV++VFA  FF   C    +  G   AC+     S D  G C        +C  IGL+ A  AL+  LG+ A  IW +GLLAAGQ+STMTGTYAGQ+VMEGFL L +  W RV  TR V++ P + VAIL++ N   SD   E +NV  S+ L FALLPVL FTSSS IMG+  +     VT W L  +V  IN+YL+   + G     + ++ A+GG   L F +         GY    +M       R     RR +++VE
Sbjct:   41 VGEIQAPDEEPTTRGFSWRTLWAYAGPGWLMSIAYVDPGNLESDLQAGAYAGYQLTWVLFGATAMGLFLQVLAARLGVVTGKNLAEMCTAVYPRWASLTLWIMTEIAIVGSDIQEVLGSSIAFQVLFGFPLWIGCLITGFDTFTFLLLHRYGIRKLEAFFVSLIIVMLVCFCANLVRGEVASEDVLRGFVPRVDRYAVTQAVGILGAVIMPHNIFLHSALVQTRQVNRHDGRKVREANKYFAIESGFALFVSFLINLAVLAVFAKGFFSSDCTTSYDTNGVNTACVSGAIASGDTYGYCQLASGGEGMCQEIGLSQAGVALSGMLGQYADTIWAIGLLAAGQSSTMTGTYAGQFVMEGFLQLHLSPWKRVALTRCVSLVPAMTVAILSQQNPADSDHMDELLNVLQSIQLPFALLPVLIFTSSSEIMGDFANSKATVVTGWLLGGLVCVINLYLLFTNLEGLALGGIGIV-ALGGTCCLYFGFL--------GYLVRADMTLSAQRARTASSSRRISQDVE 552          
BLAST of NO04G04820 vs. NCBI_GenBank
Match: OWZ21558.1 (Metal Ion (Mn2 -iron) Transporter [Phytophthora megakarya])

HSP 1 Score: 444.1 bits (1141), Expect = 7.200e-121
Identity = 244/461 (52.93%), Postives = 306/461 (66.38%), Query Frame = 0
Query:   96 VGEMGPGGHRVGAPCFSFRTLMSYTGPGFLMCIAYLDPGNLEADLQVGAYTGYDLLWMLALATFMGFALQCMAARLGVVTGKNLARVCKEHYSHAISMVLWVLIELAIIGNDLQEIIGSAIAFQILFGFPLWLGCLVTFIDTFTFLAIHYFGIRKLEGLFVVLVAIMTVCFFINFGKQPPPPGLIAEGFVPQIKPFAVLSAVGLIGAVIMPHNIYLHSALVLSRKVNRRKPAHVIEANKYFAIDSGIALLVSFVINLAVVSVFAYHFFDDGC--------ANIVGGPLACLSRDAEGAC--------ICSTIGLAGAHDALADALGKSAKYIWGVGLLAAGQASTMTGTYAGQYVMEGFLDLKIPLWARVTFTRFVAIGPGLVVAILTENNQNLSDMFQEAINVFNSVLLSFALLPVLHFTSSSAIMGEHVSGLPLTVTIWSLAFMVLAINIYLVVLRIGG 541
            VGE+           FS+RTL +Y GPG+LM IAY+DPGNLE+DLQ GAY GY L W+L  AT MG  LQ +AARLGVVTGKNLA +C   Y    S+ LW++ E+AI+G+D+QE++GS+IAFQ+LFGFPLW+GCL+T  DTFTFL +H +GIRKLE  FV L+ +M VCF  N  +       +  GFVP++  +AV  AVG++GAVIMPHNI+LHSALV +R+VNR     V EANKYFAI+SG AL VSF+INLAV++VFA  FF   C         N    P A  + D  G+C        +C  IGL+ A  AL+  LGK A  IW +GLLAAGQ+STMTGTYAGQ+VMEGFL L +  W RV  TR V++ P + VAIL++ N   SD   E +NV  S+ L FALLPVL FTSS  IMG+  +     VT W L  +V  IN+YL+   + G
Sbjct:   34 VGEVQAPDEEPTTRGFSWRTLWAYAGPGWLMSIAYVDPGNLESDLQAGAYAGYQLTWVLFGATAMGLFLQVLAARLGVVTGKNLAEMCTAVYPRWASLTLWIMTEIAIVGSDVQEVLGSSIAFQVLFGFPLWVGCLITGFDTFTFLLLHRYGIRKLEAFFVSLIVVMLVCFCANLVRGEVATEDVMSGFVPRVDRYAVTQAVGILGAVIMPHNIFLHSALVQTRQVNRHDGRKVREANKYFAIESGFALFVSFMINLAVLAVFAKGFFSADCTATYDVNGVNTACVPGAMANSDTYGSCQLASGGEGMCQEIGLSQAGVALSGMLGKYADIIWAIGLLAAGQSSTMTGTYAGQFVMEGFLQLHLSPWKRVALTRCVSLVPAMTVAILSQENPADSDHMDELLNVLQSIQLPFALLPVLIFTSSPEIMGDFANSKATVVTGWFLGGLVCVINLYLIFTNLEG 494          
BLAST of NO04G04820 vs. NCBI_GenBank
Match: XP_002906059.1 (Metal Ion (Mn2 -iron) Transporter (Nramp) Family [Phytophthora infestans T30-4] >EEY67411.1 Metal Ion (Mn2 -iron) Transporter (Nramp) Family [Phytophthora infestans T30-4])

HSP 1 Score: 443.0 bits (1138), Expect = 1.600e-120
Identity = 249/483 (51.55%), Postives = 315/483 (65.22%), Query Frame = 0
Query:   96 VGEMGPGGHRVGAPCFSFRTLMSYTGPGFLMCIAYLDPGNLEADLQVGAYTGYDLLWMLALATFMGFALQCMAARLGVVTGKNLARVCKEHYSHAISMVLWVLIELAIIGNDLQEIIGSAIAFQILFGFPLWLGCLVTFIDTFTFLAIHYFGIRKLEGLFVVLVAIMTVCFFINFGKQPPPPGLIAEGFVPQIKPFAVLSAVGLIGAVIMPHNIYLHSALVLSRKVNRRKPAHVIEANKYFAIDSGIALLVSFVINLAVVSVFAYHFFDDGC--------ANIVGGPLACLSRDAEGAC--------ICSTIGLAGAHDALADALGKSAKYIWGVGLLAAGQASTMTGTYAGQYVMEGFLDLKIPLWARVTFTRFVAIGPGLVVAILTENNQNLSDMFQEAINVFNSVLLSFALLPVLHFTSSSAIMGEHVSGLPLTVTIWSLAFMVLAINIYLVVLRIGGGQPWWMYVLTAIGGIIYLRFSY 563
            VGE+      +    FS+RTL +Y GPG+LM IAY+DPGNLE+DLQ GAY GY L W+L  AT MG  LQ +AARLGVVTGKNLA +C   Y    S+ LW++ E+AI+ +D+QE++GS+IAFQ+LFGFPLW+GCL+T  DTFTFL +H +GIRKLE  FV L+ +M VCF  N  +       +  GFVP++  +AV  AVG++GAVIMPHNI+LHSALV +R+VNR     V EANKYFAI+S  AL VSF+INLAV++VFA  FF   C         N    P A    D  G+C        +C  IGL+ A  AL+  LG+ A  IW +GLLAAGQ+STMTGTYAGQ+VMEGFL L +  W RV  TR V++ P + VAIL++ N   SD   E +NV  S+ L FALLPVL FTSSS IMG+  +     VT W L  +V  IN+YL+   +  G    +  LTA+GG   L F +
Sbjct:   42 VGEIQAPDEELTTRGFSWRTLWAYAGPGWLMSIAYVDPGNLESDLQAGAYAGYQLTWVLFGATAMGLFLQILAARLGVVTGKNLAEMCTAVYPRWASLTLWIMTEIAIVASDVQEVLGSSIAFQVLFGFPLWVGCLITGFDTFTFLLLHRYGIRKLEAFFVSLIIVMLVCFCANLVRGDVASEDVMRGFVPRVDRYAVTQAVGILGAVIMPHNIFLHSALVQTRQVNRHDGRKVREANKYFAIESSFALFVSFLINLAVLAVFAKGFFSSDCTTSYDTDGVNTACVPGAIAHGDTYGSCHLASGGEGMCQEIGLSQAGVALSGMLGQYADTIWAIGLLAAGQSSTMTGTYAGQFVMEGFLQLHLSPWKRVALTRCVSLVPAMTVAILSQENPADSDHMDELLNVLQSIQLPFALLPVLIFTSSSEIMGDFANSKATVVTGWLLGGLVCVINLYLLFTNL-EGLALGVIGLTALGGTCCLYFGF 523          
BLAST of NO04G04820 vs. NCBI_GenBank
Match: XP_009536098.1 (hypothetical protein PHYSODRAFT_306066 [Phytophthora sojae] >EGZ07926.1 hypothetical protein PHYSODRAFT_306066 [Phytophthora sojae])

HSP 1 Score: 439.1 bits (1128), Expect = 2.300e-119
Identity = 242/446 (54.26%), Postives = 302/446 (67.71%), Query Frame = 0
Query:  111 FSFRTLMSYTGPGFLMCIAYLDPGNLEADLQVGAYTGYDLLWMLALATFMGFALQCMAARLGVVTGKNLARVCKEHYSHAISMVLWVLIELAIIGNDLQEIIGSAIAFQILFGFPLWLGCLVTFIDTFTFLAIHYFGIRKLEGLFVVLVAIMTVCFFINFGKQPPPPGLIAEGFVPQIKPFAVLSAVGLIGAVIMPHNIYLHSALVLSRKVNRRKPAHVIEANKYFAIDSGIALLVSFVINLAVVSVFAYHFFDDGCA--------NIVGGPLACLSRDAEGAC--------ICSTIGLAGAHDALADALGKSAKYIWGVGLLAAGQASTMTGTYAGQYVMEGFLDLKIPLWARVTFTRFVAIGPGLVVAILTENNQNLSDMFQEAINVFNSVLLSFALLPVLHFTSSSAIMGEHVSGLPLTVTIWSLAFMVLAINIYLVVLRIGG 541
            FS+RTL +Y GPG+LM IAY+DPGNLE+DLQ  AY G  L W+L  AT MGF LQ +AARLGVVTGKNLA VC + Y    S+ LW++ E+AI+G+D+QE++GS+IAFQ+LFGFPLW+GCL+T  DTFTFL +H +GIRKLE  F  L+ IM VCF  N  +       +A GFVP++K +AV  AVG++GAVIMPHNI+LH ALV SR+VNR     V EANKYFAI+S IAL VSF+INLAV++VFA  FF   C+        N    P A    D  GAC        +C  IGL+ A  AL+  LG+ +  IW +GLLAAGQ+STMTGTYAGQ+VMEGFL+L I  W R   TR V++ P + VAIL++ N   SD   E +NV  S+ L FALLP+L FTSS  IMG+ V+     V  W L  +V  IN+YLV   + G
Sbjct:   44 FSWRTLWAYAGPGWLMSIAYVDPGNLESDLQ-AAYAGCQLTWVLFGATAMGFFLQVLAARLGVVTGKNLAEVCTDVYPRWASLTLWIMAEIAIVGSDIQEVLGSSIAFQVLFGFPLWIGCLITGFDTFTFLLLHRYGIRKLEAFFASLIVIMLVCFCANLVRGDVASADVARGFVPRVKSYAVTQAVGIVGAVIMPHNIFLHWALVQSRQVNRHDVRKVREANKYFAIESAIALFVSFLINLAVLAVFAKGFFSSDCSATFEADGLNTACVPGAAADGDVYGACRLANGGEGMCQEIGLSQAGVALSGMLGEYSDVIWAIGLLAAGQSSTMTGTYAGQFVMEGFLNLHIAPWKRGALTRCVSLVPAMAVAILSQRNPGDSDTMDEMLNVLQSIQLPFALLPILIFTSSPGIMGDFVNSKATVVGGWLLGGLVCIINLYLVFTNLEG 488          
BLAST of NO04G04820 vs. NCBI_GenBank
Match: XP_009839835.1 (hypothetical protein H257_13854 [Aphanomyces astaci] >ETV70770.1 hypothetical protein H257_13854 [Aphanomyces astaci])

HSP 1 Score: 434.1 bits (1115), Expect = 7.500e-118
Identity = 247/503 (49.11%), Postives = 325/503 (64.61%), Query Frame = 0
Query:   84 GEVDVVHELEDEVGEMGPGGHRVGAPCFSFRTLMSYTGPGFLMCIAYLDPGNLEADLQVGAYTGYDLLWMLALATFMGFALQCMAARLGVVTGKNLARVCKEHYSHAISMVLWVLIELAIIGNDLQEIIGSAIAFQILFGFPLWLGCLVTFIDTFTFLAIHYFGIRKLEGLFVVLVAIMTVCFFINFGKQPPPPGLIAEGFVPQI-KPFAVLSAVGLIGAVIMPHNIYLHSALVLSRKVNRRKPAHVIEANKYFAIDSGIALLVSFVINLAVVSVFAYHFFDDGCA---NIVGGPLACLSRDAE-----GAC-------ICSTIGLAGAHDALADALGKSAKYIWGVGLLAAGQASTMTGTYAGQYVMEGFLDLKIPLWARVTFTRFVAIGPGLVVAILTENNQNLSDMFQEAINVFNSVLLSFALLPVLHFTSSSAIMGEHVSGLPLTVTIWSLAFMVLAINIYLVVLRIG-GGQPWWMYVLTAIGGIIYLRFSYALVADDV 570
            GEV V  +++ E   +G          FS+ TL +Y GPG+LM IA++DPGNLE+DLQ GAY GY L+W+L  AT MGF LQ ++ARLGVVTGKNLA +C   Y    S VLW + E+AI+G+D+QE++GSAIA QILF  PLW+GCL+T +DTFTFL +H+FG+RKLE  F+ LVA+M VCF  N  +  P    + +GFVP I K +A   AVG++GAVIMP+N++LHS LV SR V+R+    + +ANKYFAI+  +AL VSF+INLAVV VFA  FF   C    +I G   ACL   A      G C       +C  IGL+GA  AL   L   ++ IW VGLLAAGQ+STM GTYAGQ+VMEGFL +++P W R+  TR VA+ P L VA+ +E+  + SD   E +NV  SV L FAL+P+LHFTS+  +MG   +G  + +  W++  +V  +NIYLVV ++            T  GG+ Y  F   LVA +V
Sbjct:   48 GEVGVPDDIDSEYNILG------FKFAFSWATLWAYAGPGWLMSIAFVDPGNLESDLQAGAYGGYQLIWVLLGATIMGFFLQVLSARLGVVTGKNLAEMCHLMYPRWTSRVLWFMAEVAIVGSDIQEVLGSAIALQILFKLPLWIGCLITAVDTFTFLLLHHFGVRKLEAFFMALVAVMLVCFCTNAIQGNPDTTQVLQGFVPSIPKRYATTQAVGILGAVIMPYNLFLHSGLVQSRSVDRQDGRKLAQANKYFAIEGAVALFVSFLINLAVVCVFAQSFFSLDCLPSFDIHGINTACLPLGASDSLIYGRCDLAGTPGVCQEIGLSGAGIALRGVLNSYSETIWAVGLLAAGQSSTMAGTYAGQFVMEGFLSIRLPPWKRMALTRAVALVPALSVAMWSESRPSESDSMNEFLNVLQSVQLPFALIPILHFTSNPVVMGTFANGRTMRLVGWAMTLVVCFVNIYLVVDKVPLATLAPLAQTATVGGGLAYFAFLTYLVALEV 544          
The following BLAST results are available for this feature:
BLAST of NO04G04820 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28880.11.200e-27277.502-isopropylmalate synthase [Nannochloropsis gadita... [more]
CBN78636.17.400e-13454.09divalent metal transporter [Ectocarpus siliculosus... [more]
ETK94195.12.200e-12249.71hypothetical protein L915_02704 [Phytophthora para... [more]
XP_009536103.12.900e-12251.85hypothetical protein PHYSODRAFT_527737 [Phytophtho... [more]
ETI54351.11.900e-12149.52hypothetical protein F443_02814 [Phytophthora para... [more]
ETM00675.15.500e-12149.52hypothetical protein L917_02619 [Phytophthora para... [more]
OWZ21558.17.200e-12152.93Metal Ion (Mn2 -iron) Transporter [Phytophthora me... [more]
XP_002906059.11.600e-12051.55Metal Ion (Mn2 -iron) Transporter (Nramp) Family [... [more]
XP_009536098.12.300e-11954.26hypothetical protein PHYSODRAFT_306066 [Phytophtho... [more]
XP_009839835.17.500e-11849.11hypothetical protein H257_13854 [Aphanomyces astac... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL080nonsL080Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR058ncniR058Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR110ngnoR110Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009293NSK009293Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G04820.1NO04G04820.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|524416gene_2269Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G04820.1NO04G04820.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G04820 ID=NO04G04820|Name=NO04G04820|organism=Nannochloropsis oceanica|type=gene|length=2525bp
ATGTCGAGCGACGATGAGAATGCGGTGCACACGGCCCTTGTCCCCACGGA
TGCCACTGCTACTGCTGCTGCTGCAGCTGCGCTCCTTCCTACTTCAGGTG
AAGCCCGCCGGTCCTTAGAGGAGCTGGAGGCAGACGACCCCGAATACAGA
GAGACGCACACGCACCCACGGCCAGGGCATGACCACGAGAAGCCGCCGAA
ATCAGGGATATTCTCCTTTTTGTACGCTGTCGAGGGTGGTGACCCGGATG
GAGAAGTGGATGTAGTGCATGAATTGGAGGATGAAGTCGGGGAGATGGGA
CCAGGGGGACACCGAGTGGGGGCACCATGCTTTAGTTTTCGGACGCTCAT
GTCGTATACGGGGCCCGGGTTCTTGATGTGCATTGCTTACTTGGATCCGG
GCAATTTGGAGGCGGATTTGCAGGTTGGCGCGTACACGGgtacgtatgct
ggaaaggggcggagaggaggaggaggaggagcatgaggacgaggaggagg
gaggagtgggagggctgtgcttctttttcctactttgttttgcggccttt
tagccctattattgcctcaagacaacttccccctctcctcacgtcttcac
ttccttcctccctcccttcttcttttcctcaccttacctgcagGCTACGA
CCTGCTATGGATGTTGGCCCTGGCCACGTTTATGGGCTTTGCTCTTCAAT
GCATGGCAGCACGCCTAGGGGTGGTGACAGGCAAGAATCTTGCGCGAGTC
TGCAAGgtacgtgttagtggactttccggcatttctgattaatgtggagt
ggtgctggtagatgctctcctgcgacatttcgtttatgccctcttcttcc
tccttcccttcgccacttggttgtagggtattagattctgcaaagactcc
gtttaagcccacccctcaccctccttccctccttccctctctctccctcc
ttcccagGAGCACTACAGCCACGCCATTTCCATGGTCCTGTGGGTTCTTA
TCGAACTGGCCATCATTGGCAATGACCTCCAAGAAATCATTGGGTCGGCC
ATCGCCTTTCAGATCCTCTTCGGCTTCCCCCTGTGGCTTGGGTGCTTGGT
GACCTTCATCGACACCTTCACCTTCCTCGCGATCCACTACTTCGGCATTC
GGAAGCTCGAAGGGCTCTTCGTCGTGCTGGTGGCCATCATGACGGTGTGC
TTTTTTATTAATTTTGGGAAACAACCACCACCGCCGGGACTGATCGCCGA
AGGTTTTGTGCCCCAAATCAAACCGTTTGCCGTCTTGTCGGCAGTCGGGC
TGATTGgtaaggaagggagggagggagggagggagggagggatccggcca
tggttctgattcactattgtctacctgccttgggccctcgtcctctccca
gaaggcttggccattgcaagcctgcggatggcaagacaatcggcaaagta
aactccccccaccctctcaccctccctccctctcacccttcctccctccc
tttcttccccagGCGCGGTGATCATGCCTCACAACATCTACCTGCACTCG
GCCCTTGTCCTCTCTCGGAAAGTGAACCGCCGCAAGCCCGCGCACGTCAT
TGAAGCCAACAAGTACTTCGCGATCGACTCGGGCATTGCCTTGTTGGTGT
CTTTTGTGATCAACCTGGCCGTGGTCTCCGTCTTCGCCTACCATTTTTTC
GACGACGGGTGCGCCAACATAGTGGGGGGTCCACTGGCTTGCCTCTCCCG
GGACGCGGAAGGTGCATGTATATGCAGCACCATCGGCCTCGCTGGAGCTC
ATGATGCCCTGGCTGACGCTCTGGGAAAAAGCGCGAAGTACATCTGGGGG
GTCGGGTTGTTGGCAGCAGGACAAGCGAGCACCATGACGGGGACGTATGC
CGGACAGTATGTAATGGAAGGTTTCCTCGACCTAAAGATTCCCTTGTGGG
CGCGTGTGACCTTCACACGATTCGTGGCCATTGGGCCGGGGCTGGTCGTT
GCGATTCTGACGGAGAACAACCAAAATTTGAGTGACATGTTCCAAGAAGC
CATCAATGTCTTCAATTCGGTGTTGCTGTCGTTTGCGCTCTTGCCCGTGC
TGCATTTCACGTCCTCTTCGGCAATTATGGGGGAGCACGTGTCAGGCCTG
CCTTTAACAGTGACCATCTGGTCGTTGGCTTTCATGGTCTTGGCAATAAA
TATCTATCTGGTGGTGCTGCGGATAGGGGGGGGGCAACCGTGGTGGATGT
ATGTCCTGACAGCGATCGGAGGGATCATTTATTTGAGGTTCTCGTATGCA
TTGGTGGCTGATGATGTGGTGAAGGGCTATTGGGGTGTGGTGGAAATGAT
GCCTGAAGGGTGGGAGGTGCGGCGACGGCTGTTGGAGAGGAGAAAGGCGA
GGGAGGTGGAGGGAGGGAAGGAAGGAGGGGGGAAAGGGGTGATCATAGTG
GCGTCAGGGCACCATAGGCTGGATAACCCGTTGATTGAGAGTGTGAGTGA
TGGGGAAGGCGAGGCGTCGACGTAG
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protein sequence of NO04G04820.1

>NO04G04820.1-protein ID=NO04G04820.1-protein|Name=NO04G04820.1|organism=Nannochloropsis oceanica|type=polypeptide|length=638bp
MSSDDENAVHTALVPTDATATAAAAAALLPTSGEARRSLEELEADDPEYR
ETHTHPRPGHDHEKPPKSGIFSFLYAVEGGDPDGEVDVVHELEDEVGEMG
PGGHRVGAPCFSFRTLMSYTGPGFLMCIAYLDPGNLEADLQVGAYTGYDL
LWMLALATFMGFALQCMAARLGVVTGKNLARVCKEHYSHAISMVLWVLIE
LAIIGNDLQEIIGSAIAFQILFGFPLWLGCLVTFIDTFTFLAIHYFGIRK
LEGLFVVLVAIMTVCFFINFGKQPPPPGLIAEGFVPQIKPFAVLSAVGLI
GAVIMPHNIYLHSALVLSRKVNRRKPAHVIEANKYFAIDSGIALLVSFVI
NLAVVSVFAYHFFDDGCANIVGGPLACLSRDAEGACICSTIGLAGAHDAL
ADALGKSAKYIWGVGLLAAGQASTMTGTYAGQYVMEGFLDLKIPLWARVT
FTRFVAIGPGLVVAILTENNQNLSDMFQEAINVFNSVLLSFALLPVLHFT
SSSAIMGEHVSGLPLTVTIWSLAFMVLAINIYLVVLRIGGGQPWWMYVLT
AIGGIIYLRFSYALVADDVVKGYWGVVEMMPEGWEVRRRLLERRKAREVE
GGKEGGGKGVIIVASGHHRLDNPLIESVSDGEGEAST*
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Synonyms
Publications