NO04G04030, NO04G04030 (gene) Nannochloropsis oceanica

Overview
NameNO04G04030
Unique NameNO04G04030
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2608
Alignment locationchr4:1079132..1081739 -

Link to JBrowse

Properties
Property NameValue
DescriptionG-protein beta subunit 1
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:1079132..1081739 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036155Crypto/Photolyase_N_sf
IPR036134Crypto/Photolyase_FAD-like_sf
IPR006050DNA_photolyase_N
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
Homology
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BLAST of NO04G04030 vs. NCBI_GenBank
Match: EWM28754.1 (g-protein beta subunit 1 [Nannochloropsis gaditana])

HSP 1 Score: 665.2 bits (1715), Expect = 2.200e-187
Identity = 359/639 (56.18%), Postives = 418/639 (65.41%), Query Frame = 0 
Query:   14 LPPGVHRNRLKWLKGGDSHALIVPPNRAALSSAPSPSSYSP------------------------SAAPQCVVYWMQRSVRSTLNHALEMSIHHANNLGLPLIVVFAIVTSYPGANERGFAFLFEGLSEVQSLLAKRGIRMVVREAKPXXXXXXXXXXXXXXXXXXXXXVPDVVLDTCRRLNAPLLIMDRAYERLLRTWRDIVCTCINCPVLLVESDVVVPVEAASPRPLASAAALRRAHAPLLAQYLQPLPD-----------------TTTFAFDELDLSDPHALLSSLSGIDRSVPRITFKRGGPTQAKLHLARFLRDRLEGYQNKRKEAGERHQSFLSPYLHFGHISPLYVVEKVKKHTRSSAEDRRRFVDELVTWREMACHFVWWNREGYDRWEGAVPRWARETLLEGWRQAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAYSLEELEEGRTHDVLWNAAQMEMRVTGYMHNYLRMFWCKSIILWTAEGPEEAYRRSLYLNDRYFLDGRDCNGYMGVGWCFGLYDRPMPGRSPVFGKVRRMTTSGVRSKMDVGKYVEQVRHLARKVREEGREGSEG-------------------LKVEDAIYATPMKRSIETFIS 593
            LP GVH  RLKWL G +          A L    S SS+ P                        S+ P+CVVYWMQRSVRS+ NHALE++IH+AN L +PL+VV+AIVTSYPGANERGFAFLFEGL E Q+ LA RGIR+VVREAK                      VP  ++DTC+R+ APLL+MDRAYERLLRTWR+ VC  + CPVL+VESDVVVPV+  SP+PL+SAAALRRAHAPLL+QYL PLP+                  +    DEL++ DP ALLSSL+ +DRSVPR++FKRGG TQAKL LARFLRDRL GYQ +RKEA  RHQSFLSPYLHFGHISP+YV  KV++H  S+ +DRRRF DEL+TWREMA HFV+ +RE YDR+EG +PRWARE+L E                                                  HAYSL ELEEGRTHD+LWNAAQ EMRVTGYM+NY+RMFWCKSII WTAEGP EAYRRSL+LND+YFLDGRDCNGYMGV WCFGLYDRPMPG SP+FGKVRRMT +GVR+K DVG Y+ QV+ LA KV    R G EG                   L VEDAIYA P+   ++ F+S
Sbjct:   15 LPSGVHHTRLKWLNGCE----------ARLYCHTSSSSFPPRSXXXXXXXXXXXXXNITTPVAKDSSVPRCVVYWMQRSVRSSFNHALEVAIHYANQLDVPLLVVYAIVTSYPGANERGFAFLFEGLHEAQTSLANRGIRLVVREAK--------VVGENSTRGAAATAVPLTIVDTCKRVKAPLLVMDRAYERLLRTWREDVCARVACPVLMVESDVVVPVDVVSPQPLSSAAALRRAHAPLLSQYLLPLPEGSLRHPSHALPACSPSAPSPLFPDELEMHDPLALLSSLADLDRSVPRVSFKRGGSTQAKLLLARFLRDRLRGYQARRKEAVARHQSFLSPYLHFGHISPIYVALKVRQHASSTPQDRRRFCDELLTWREMAVHFVYHHRESYDRYEG-IPRWARESLEEA-------------------------------------------AEGERRHAYSLTELEEGRTHDLLWNAAQEEMRVTGYMNNYMRMFWCKSIIAWTAEGPREAYRRSLFLNDKYFLDGRDCNGYMGVAWCFGLYDRPMPGFSPIFGKVRRMTANGVRAKQDVGAYICQVKDLAAKVERASRWGREGGGKGHCGDGNIEEHQNGAMLGVEDAIYAKPLSHRVDAFLS 591
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BLAST of NO04G04030 vs. NCBI_GenBank
Match: WP_086985638.1 (deoxyribodipyrimidine photolyase [Trichococcus collinsii] >CZQ88685.1 dna photolyase class 2 [Trichococcus collinsii] >SEA46493.1 deoxyribodipyrimidine photo-lyase [Trichococcus collinsii])

HSP 1 Score: 339.7 bits (870), Expect = 2.100e-89
Identity = 199/508 (39.17%), Postives = 277/508 (54.53%), Query Frame = 0 
Query:   61 VVYWMQRSVRSTLNHALEMSIHHANNLGLPLIVVFAIVTSYPGANERGFAFLFEGLSEVQSLLAKRGIRMVVREAKPXXXXXXXXXXXXXXXXXXXXXVPDVVLDTCRRLNAPLLIMDRAYERLLRTWRDIVCTCINCPVLLVESDVVVPVEAASPRPLASAAALRRAHAPLLAQYLQPLPDTT--------TFAFDELDLSDPHALLSSLSGIDRSVPRITFKRGGPTQAKLHLARFLRDRLEGYQNKRKEAGERHQSFLSPYLHFGHISPLYVVEKVKKHTRSSAEDRRRFVDELVTWREMACHFVWWNREGYDRWEGAVPRWARETLLEGWRQAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAYSLEELEEGRTHDVLWNAAQMEMRVTGYMHNYLRMFWCKSIILWTAEGPEEAYRRSLYLNDRYFLDGRDCNGYMGVGWCFGLYDRPMPGRSPVFGKVRRMTTSGVRSKMDVGKYVEQVRHLARK 561
            VVYWMQ S R+  NHALE +I  AN L  PL+V F I   +P ANER +AF+ EGL E ++ L +RGI+M++R+  P                                  A L+++DR Y R+ R WR ++     C V+ +ES+VVVPVE ASP+   SAA LR     +L   L PL +T            F+  D+SD    L+ L+ IDRSVPR++   GG ++AK  L  F++++L GY  ++   GE   S LSPYLHFG ISPLYV  ++       +E ++ F++ELV  RE+A +FV++N E YD +  AVP WA++TL +                                                  + YSL+ELE  +THD  WNAAQ+EM +TG MH Y+RM+W K I+ W++  PEEAYR+++YLN++Y LDGRD NG+ GV WCFG +DRP  G   +FG VR M   G++ K D+  Y++QV   +RK
Sbjct:   22 VVYWMQSSQRAEYNHALEYAIRQANRLEKPLVVYFGITDGFPEANERHYAFMLEGLKETKAALEQRGIQMLIRKISPEQGALEISEL------------------------AALMVVDRGYLRIERQWRAVLAASTECAVVQIESNVVVPVELASPKEEYSAATLRSKLKKILPHCLAPLEETVCQHPSIAEKLPFEAYDISDTKLALAGLA-IDRSVPRVSDYIGGTSEAKCWLEDFIKNKLAGYSEQKNRPGESVTSNLSPYLHFGQISPLYVYRRL---MGMDSESQQSFLEELVVRRELAINFVYYN-EQYDSF-AAVPDWAKKTLAK-------------------------------------------HLADEREYLYSLKELEVAKTHDDYWNAAQLEMNLTGKMHGYMRMYWAKKILEWSST-PEEAYRKAIYLNNKYLLDGRDPNGFAGVSWCFGKHDRPW-GERAIFGNVRFMNDKGLKRKFDMQLYMDQVAERSRK 454
[Close]
BLAST of NO04G04030 vs. NCBI_GenBank
Match: CZR09658.1 (dna photolyase class 2 [Trichococcus sp. ES5] >SHG11609.1 deoxyribodipyrimidine photo-lyase [Trichococcus flocculiformis])

HSP 1 Score: 339.7 bits (870), Expect = 2.100e-89
Identity = 202/508 (39.76%), Postives = 272/508 (53.54%), Query Frame = 0 
Query:   61 VVYWMQRSVRSTLNHALEMSIHHANNLGLPLIVVFAIVTSYPGANERGFAFLFEGLSEVQSLLAKRGIRMVVREAKPXXXXXXXXXXXXXXXXXXXXXVPDVVLDTCRRLNAPLLIMDRAYERLLRTWRDIVCTCINCPVLLVESDVVVPVEAASPRPLASAAALRRAHAPLLAQYLQPLPDT--------TTFAFDELDLSDPHALLSSLSGIDRSVPRITFKRGGPTQAKLHLARFLRDRLEGYQNKRKEAGERHQSFLSPYLHFGHISPLYVVEKVKKHTRSSAEDRRRFVDELVTWREMACHFVWWNREGYDRWEGAVPRWARETLLEGWRQAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAYSLEELEEGRTHDVLWNAAQMEMRVTGYMHNYLRMFWCKSIILWTAEGPEEAYRRSLYLNDRYFLDGRDCNGYMGVGWCFGLYDRPMPGRSPVFGKVRRMTTSGVRSKMDVGKYVEQVRHLARK 561
            VVYWMQ S R+  NHALE +I  AN L  PL+V F I   +P ANER +AF+ EGL E ++ L +RGI+M++R+  P                                  A LL++DR Y R+ R WR  +     C V+ +ES+VVVPVE ASP+   SAA LR     +L   L PL +T            F+  D+SD    L+ L  IDRSVPR++   GG T AK  L  F+ ++L GY  ++   GE   S LSPYLHFG ISPLY+  ++       +E ++ F++ELV  RE+A +FV++N E YD +  AVP WA++TL                                                    + YS+EELE  +THD  WNAAQ+EM +TG MH Y+RM+W K I+ W++  PEEAYR+++YLN++Y LDGRD NG+ GV WCFG +DRP  G   +FG VR M   G++ K D+  Y+EQV   ARK
Sbjct:   39 VVYWMQSSQRAEYNHALEYAIRQANRLEKPLVVYFGITDGFPEANERHYAFMLEGLKETKAALEQRGIQMLIRKISPEQGALEISEL------------------------AALLVVDRGYLRIERKWRATLAEGAECAVVQIESNVVVPVELASPKEEYSAATLRSKLKKILPHCLAPLEETVCQHPSVAAELPFEAYDVSDTEKALAGLD-IDRSVPRVSDYIGGTTVAKRWLEDFIENKLAGYSERKNRPGESFTSNLSPYLHFGQISPLYIYRRL---MGMDSESQQSFLEELVVRRELAVNFVYYN-EQYDSY-AAVPDWAKKTL-------------------------------------------DKHLADEREYLYSVEELEAAKTHDDYWNAAQLEMNLTGKMHGYMRMYWAKKILEWSST-PEEAYRKAIYLNNKYLLDGRDPNGFAGVSWCFGKHDRPW-GERAIFGNVRFMNDKGLKRKFDMQLYLEQVAERARK 471
[Close]
BLAST of NO04G04030 vs. NCBI_GenBank
Match: WP_068562518.1 (MULTISPECIES: deoxyribodipyrimidine photolyase [Trichococcus])

HSP 1 Score: 339.7 bits (870), Expect = 2.100e-89
Identity = 202/508 (39.76%), Postives = 272/508 (53.54%), Query Frame = 0 
Query:   61 VVYWMQRSVRSTLNHALEMSIHHANNLGLPLIVVFAIVTSYPGANERGFAFLFEGLSEVQSLLAKRGIRMVVREAKPXXXXXXXXXXXXXXXXXXXXXVPDVVLDTCRRLNAPLLIMDRAYERLLRTWRDIVCTCINCPVLLVESDVVVPVEAASPRPLASAAALRRAHAPLLAQYLQPLPDT--------TTFAFDELDLSDPHALLSSLSGIDRSVPRITFKRGGPTQAKLHLARFLRDRLEGYQNKRKEAGERHQSFLSPYLHFGHISPLYVVEKVKKHTRSSAEDRRRFVDELVTWREMACHFVWWNREGYDRWEGAVPRWARETLLEGWRQAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAYSLEELEEGRTHDVLWNAAQMEMRVTGYMHNYLRMFWCKSIILWTAEGPEEAYRRSLYLNDRYFLDGRDCNGYMGVGWCFGLYDRPMPGRSPVFGKVRRMTTSGVRSKMDVGKYVEQVRHLARK 561
            VVYWMQ S R+  NHALE +I  AN L  PL+V F I   +P ANER +AF+ EGL E ++ L +RGI+M++R+  P                                  A LL++DR Y R+ R WR  +     C V+ +ES+VVVPVE ASP+   SAA LR     +L   L PL +T            F+  D+SD    L+ L  IDRSVPR++   GG T AK  L  F+ ++L GY  ++   GE   S LSPYLHFG ISPLY+  ++       +E ++ F++ELV  RE+A +FV++N E YD +  AVP WA++TL                                                    + YS+EELE  +THD  WNAAQ+EM +TG MH Y+RM+W K I+ W++  PEEAYR+++YLN++Y LDGRD NG+ GV WCFG +DRP  G   +FG VR M   G++ K D+  Y+EQV   ARK
Sbjct:   22 VVYWMQSSQRAEYNHALEYAIRQANRLEKPLVVYFGITDGFPEANERHYAFMLEGLKETKAALEQRGIQMLIRKISPEQGALEISEL------------------------AALLVVDRGYLRIERKWRATLAEGAECAVVQIESNVVVPVELASPKEEYSAATLRSKLKKILPHCLAPLEETVCQHPSVAAELPFEAYDVSDTEKALAGLD-IDRSVPRVSDYIGGTTVAKRWLEDFIENKLAGYSERKNRPGESFTSNLSPYLHFGQISPLYIYRRL---MGMDSESQQSFLEELVVRRELAVNFVYYN-EQYDSY-AAVPDWAKKTL-------------------------------------------DKHLADEREYLYSVEELEAAKTHDDYWNAAQLEMNLTGKMHGYMRMYWAKKILEWSST-PEEAYRKAIYLNNKYLLDGRDPNGFAGVSWCFGKHDRPW-GERAIFGNVRFMNDKGLKRKFDMQLYLEQVAERARK 454
[Close]
BLAST of NO04G04030 vs. NCBI_GenBank
Match: WP_107995579.1 (deoxyribodipyrimidine photolyase [Trichococcus paludicola])

HSP 1 Score: 338.6 bits (867), Expect = 4.600e-89
Identity = 202/508 (39.76%), Postives = 278/508 (54.72%), Query Frame = 0 
Query:   61 VVYWMQRSVRSTLNHALEMSIHHANNLGLPLIVVFAIVTSYPGANERGFAFLFEGLSEVQSLLAKRGIRMVVREAKPXXXXXXXXXXXXXXXXXXXXXVPDVVLDTCRRLNAPLLIMDRAYERLLRTWRDIVCTCINCPVLLVESDVVVPVEAASPRPLASAAALRRAHAPLLAQYLQPLPDT--------TTFAFDELDLSDPHALLSSLSGIDRSVPRITFKRGGPTQAKLHLARFLRDRLEGYQNKRKEAGERHQSFLSPYLHFGHISPLYVVEKVKKHTRSSAEDRRRFVDELVTWREMACHFVWWNREGYDRWEGAVPRWARETLLEGWRQAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAYSLEELEEGRTHDVLWNAAQMEMRVTGYMHNYLRMFWCKSIILWTAEGPEEAYRRSLYLNDRYFLDGRDCNGYMGVGWCFGLYDRPMPGRSPVFGKVRRMTTSGVRSKMDVGKYVEQVRHLARK 561
            VVYWMQ S R+  NHALE +I  AN L  PL+V F I   +P ANER +AF+ EGL E ++ L +RGI++++R+  P                          L   R   A LL++DR Y R+ R WR  +     C V+ +E++VVVPVE ASP+   SAA LR     +L Q L PL  T        +   F+  D+SD    L+ L+ IDRSVPR++   GG ++AK  L  F+ ++L GY  +R   GE   S LSPYLHFG ISPLY+  ++       +E ++ F++ELV  RE+A +FV++N E YD +  AVP WA++TL +                                                  + YSLEELE  +THD  WNAAQ+EM +TG MH Y+RM+W K I+ W++  PEEAYR+++YLN++Y LDGRD NG+ GV WCFG +DRP  G   +FG VR M   G++ K D+  Y++QV   +RK
Sbjct:   22 VVYWMQSSQRAEYNHALEYAIRQANRLEKPLVVYFGITDGFPEANERHYAFMLEGLKETKAALEQRGIQLLIRKISPEQG----------------------ALQISRL--AALLVVDRGYLRIERQWRAALAKGAECAVVQIETNVVVPVELASPKEEYSAATLRSKLKKILPQCLAPLEATVCQHPSLASKLPFEAYDVSDTEKALTGLA-IDRSVPRVSDYIGGTSEAKRWLEDFIENKLSGYGERRNRPGESFTSNLSPYLHFGQISPLYIYRRL---MGMDSESQQSFLEELVVRRELAINFVYYN-EQYDSF-AAVPDWAKKTLAK-------------------------------------------HLADEREYLYSLEELEVAKTHDDYWNAAQLEMNLTGKMHGYMRMYWAKKILEWSST-PEEAYRKAIYLNNKYLLDGRDPNGFAGVSWCFGKHDRPW-GERAIFGNVRFMNDKGLKRKFDMPLYMDQVAERSRK 454
[Close]
BLAST of NO04G04030 vs. NCBI_GenBank
Match: WP_068623318.1 (MULTISPECIES: deoxyribodipyrimidine photolyase [Trichococcus] >CZR02830.1 dna photolyase class 2 [Trichococcus ilyis] >SEJ67192.1 deoxyribodipyrimidine photo-lyase [Trichococcus sp. DSM 22150])

HSP 1 Score: 337.0 bits (863), Expect = 1.300e-88
Identity = 201/507 (39.64%), Postives = 274/507 (54.04%), Query Frame = 0 
Query:   61 VVYWMQRSVRSTLNHALEMSIHHANNLGLPLIVVFAIVTSYPGANERGFAFLFEGLSEVQSLLAKRGIRMVVREAKPXXXXXXXXXXXXXXXXXXXXXVPDVVLDTCRRLNAPLLIMDRAYERLLRTWRDIVCTCINCPVLLVESDVVVPVEAASPRPLASAAALRRAHAPLLAQYLQPLPDTT--------TFAFDELDLSDPHALLSSLSGIDRSVPRITFKRGGPTQAKLHLARFLRDRLEGYQNKRKEAGERHQSFLSPYLHFGHISPLYVVEKVKKHTRSSAEDRRRFVDELVTWREMACHFVWWNREGYDRWEGAVPRWARETLLEGWRQAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAYSLEELEEGRTHDVLWNAAQMEMRVTGYMHNYLRMFWCKSIILWTAEGPEEAYRRSLYLNDRYFLDGRDCNGYMGVGWCFGLYDRPMPGRSPVFGKVRRMTTSGVRSKMDVGKYVEQVRHLAR 560
            VVYWMQ S R+  NHALE +I  AN LG PLIV F I   +P ANER +AF+ EGL E ++ L +RGI++++R+  P                                  A LL++DR Y R+ R WR  V     C V+ VES+VVVPVE ASP+   SAA LR     +L   L PL ++T           F+  D+SD  A L+ L+ IDRSVPR+    GG ++AK  L  F+  +L GY  ++   GE   S LSPYLHFG ISPLYV  ++       +E ++ F++ELV  RE+A +FV++N E YD +  AVP WA++TL +                                                  + Y+LEELE  +THD  WNAAQ+EM +TG MH Y+RM+W K I+ W++  PE+AYR++++LN++Y LDGRD NG+ GV WCFG +DRP  G   +FG VR M   G++ K D+  Y++QV    R
Sbjct:   22 VVYWMQSSQRAEYNHALEYAIRQANRLGKPLIVFFGITDGFPEANERHYAFMLEGLKETKAALEQRGIQLLIRKISPEQGALELSGL------------------------AALLVVDRGYLRIERQWRAAVAEGAKCAVVQVESNVVVPVELASPKEEYSAATLRSKVKKVLPLCLAPLEESTCKHPSIALELPFEAYDVSDTGAALTGLN-IDRSVPRVADYVGGTSEAKRRLEDFIEHKLAGYSERKNRPGESFTSNLSPYLHFGQISPLYVYRRL---MGMDSESQQSFLEELVVRRELAVNFVYYN-EQYDSF-AAVPDWAKKTLAK-------------------------------------------HLVDEREYLYTLEELEAAKTHDDYWNAAQLEMNLTGKMHGYMRMYWAKKILEWSST-PEDAYRKAIHLNNKYLLDGRDPNGFAGVSWCFGKHDRPW-GERAIFGNVRFMNDKGLKRKFDMPLYLDQVAKRTR 453
[Close]
BLAST of NO04G04030 vs. NCBI_GenBank
Match: PKN32881.1 (deoxyribodipyrimidine photolyase [Deltaproteobacteria bacterium HGW-Deltaproteobacteria-19])

HSP 1 Score: 335.1 bits (858), Expect = 5.100e-88
Identity = 205/525 (39.05%), Postives = 275/525 (52.38%), Query Frame = 0 
Query:   35 IVPPNRAALSSAPSPSSYSPSAAPQCVVYWMQRSVRSTLNHALEMSIHHANNLGLPLIVVFAIVTSYPGANERGFAFLFEGLSEVQSLLAKRGIRMVVREAKPXXXXXXXXXXXXXXXXXXXXXVPDVVLDTCRRLNAPLLIMDRAYERLLRTWRDIVCTCINCPVLLVESDVVVPVEAASPRPLASAAALRRAHAPLLAQYLQPLPDTTT------FAFDELDLSDPHALLSSLSGIDRSVPRITFKRGGPTQAKLHLARFLRDRLEGYQNKRKEAGERHQSFLSPYLHFGHISPLYVVEKVKKHTRSSAEDRRRFVDELVTWREMACHFVWWNREGYDRWEGAVPRWARETLLEGWRQAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAYSLEELEEGRTHDVLWNAAQMEMRVTGYMHNYLRMFWCKSIILWTAEGPEEAYRRSLYLNDRYFLDGRDCNGYMGVGWCFGLYDRPMPGRSPVFGKVRRMTTSGVRSKMDVGKYVEQ 554
            ++ P R  L +  SP         + V+YWMQ S R+T NHALE ++  AN +GLP++V F +   +P AN R   FL EGL EV++ L KRGI +V+R   P                          L+ CR  +A L + DR Y R+ + WR+ V     CP++ VESDV+VPVE+ASP+   SAA LR      L  +L PL +T             L L+DP A+L  L  +DR VP +   RGG  +A+  L RFL   L+ Y   R   G    S LSPYLHFGHISPL +V  V+   R +   +  F++EL+  RE+A +FV +N   YD ++GAVP WA+ TL E  R                                               +AYS  +LEE  THD  WNAAQ EM  TG MH Y+RM+W K I+ W+A  P EA+R +L LN+R+ LDGRD NG+ GV WCFG +DRP  G  P+FGKVR M  +G++ K D+  Y+++
Sbjct:    1 MIHPERITLLNRQSPRK------GRWVLYWMQASQRATGNHALEFAVREANGMGLPVVVFFGLTPDFPEANLRHCRFLLEGLREVRNDLDKRGIALVIRAVSPEKG----------------------ALELCR--DAALAVTDRGYLRIQKAWREAVAREAPCPLIRVESDVIVPVESASPKEEFSAATLRPKIRTRLGDFLHPLEETPVKRDSLGLRLPGLSLNDPEAILRDLP-VDRGVPPVDSFRGGSGEARKFLKRFLAHALDRYDKDRNVPGSDAVSNLSPYLHFGHISPLEIVLAVRASRRGNPAAKESFLEELIVRRELALNFVHYN-PAYDAYKGAVPAWAQRTLEEHGRD-------------------------------------------RREYAYSFRDLEEACTHDPYWNAAQREMVRTGKMHGYMRMYWGKKILEWSA-SPAEAFRTALALNNRWELDGRDPNGFAGVAWCFGKHDRPW-GERPIFGKVRYMNAAGLKRKFDMRPYLDR 448
[Close]
BLAST of NO04G04030 vs. NCBI_GenBank
Match: WP_086943174.1 (deoxyribodipyrimidine photolyase [Trichococcus pasteurii] >SFE52975.1 deoxyribodipyrimidine photo-lyase [Trichococcus pasteurii] >SLM52413.1 dna photolyase class 2 [Trichococcus pasteurii])

HSP 1 Score: 334.3 bits (856), Expect = 8.700e-88
Identity = 200/508 (39.37%), Postives = 271/508 (53.35%), Query Frame = 0 
Query:   61 VVYWMQRSVRSTLNHALEMSIHHANNLGLPLIVVFAIVTSYPGANERGFAFLFEGLSEVQSLLAKRGIRMVVREAKPXXXXXXXXXXXXXXXXXXXXXVPDVVLDTCRRLNAPLLIMDRAYERLLRTWRDIVCTCINCPVLLVESDVVVPVEAASPRPLASAAALRRAHAPLLAQYLQPLPDTTT--------FAFDELDLSDPHALLSSLSGIDRSVPRITFKRGGPTQAKLHLARFLRDRLEGYQNKRKEAGERHQSFLSPYLHFGHISPLYVVEKVKKHTRSSAEDRRRFVDELVTWREMACHFVWWNREGYDRWEGAVPRWARETLLEGWRQAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAYSLEELEEGRTHDVLWNAAQMEMRVTGYMHNYLRMFWCKSIILWTAEGPEEAYRRSLYLNDRYFLDGRDCNGYMGVGWCFGLYDRPMPGRSPVFGKVRRMTTSGVRSKMDVGKYVEQVRHLARK 561
            VVYWMQ S R   NHALE +I  AN L  PL+V F I   +P ANER +AF+ EGL E ++ L +RGI++++R+  P                                  A LL++DR Y R+ R WR  +     C V+ VES+VVVPVE ASP+   SAA LR     +L   L PL +T +          F+  D+SD    LS L  IDRSVPR++   GG ++AK  L  F+ ++L GY  ++   GE   S LSPYLHFG ISPLYV   +       +E ++ F++ELV  RE+A +FV++N E YD +  AVP WA++TL +                                                  + YS+EELE  +THD  WN AQMEM +TG MH Y+RM+W K I+ W++  PEEAYR+++YLN++Y LDGRD NG+ GV WCFG +DRP  G   +FG VR M   G++ K D+  Y++QV   + K
Sbjct:   22 VVYWMQSSQREEYNHALEYAIRQANRLEKPLVVYFGITDGFPEANERHYAFMLEGLKETKAALEQRGIQLLIRKISPEQGALEISGL------------------------AALLVVDRGYLRIERQWRATLANGAECAVVQVESNVVVPVELASPKEEYSAATLRSKLKKILPLCLAPLEETVSQHPSLALELPFEAYDVSDTEKALSRLI-IDRSVPRVSDYIGGTSEAKRWLGDFIENKLAGYSERKNRPGESFSSNLSPYLHFGQISPLYVYRSL---MGMDSESQQSFLEELVVRRELAINFVYYN-EQYDSF-AAVPDWAKKTLAK-------------------------------------------HLADEREYLYSVEELEAAKTHDDYWNTAQMEMNLTGKMHGYMRMYWAKKILEWSST-PEEAYRKAIYLNNKYLLDGRDPNGFAGVSWCFGKHDRPW-GERAIFGNVRFMNDKGLKRKFDMQLYMDQVAERSLK 454
[Close]
BLAST of NO04G04030 vs. NCBI_GenBank
Match: WP_106449228.1 (deoxyribodipyrimidine photolyase [Trichococcus alkaliphilus])

HSP 1 Score: 334.3 bits (856), Expect = 8.700e-88
Identity = 198/508 (38.98%), Postives = 275/508 (54.13%), Query Frame = 0 
Query:   61 VVYWMQRSVRSTLNHALEMSIHHANNLGLPLIVVFAIVTSYPGANERGFAFLFEGLSEVQSLLAKRGIRMVVREAKPXXXXXXXXXXXXXXXXXXXXXVPDVVLDTCRRLNAPLLIMDRAYERLLRTWRDIVCTCINCPVLLVESDVVVPVEAASPRPLASAAALRRAHAPLLAQYLQPLPDT--------TTFAFDELDLSDPHALLSSLSGIDRSVPRITFKRGGPTQAKLHLARFLRDRLEGYQNKRKEAGERHQSFLSPYLHFGHISPLYVVEKVKKHTRSSAEDRRRFVDELVTWREMACHFVWWNREGYDRWEGAVPRWARETLLEGWRQAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAYSLEELEEGRTHDVLWNAAQMEMRVTGYMHNYLRMFWCKSIILWTAEGPEEAYRRSLYLNDRYFLDGRDCNGYMGVGWCFGLYDRPMPGRSPVFGKVRRMTTSGVRSKMDVGKYVEQVRHLARK 561
            VVYWMQ S R+  NHALE +I  AN L   L+V F +   +P ANER +AF+ EGL E ++ L +RGI++++R+  P                                  A LL++DR Y R+ R WR  +     C V+ +ES+VVVPVE ASP+   SAA LR     +L Q L PL +T        +   F+  D+SD    L+ L+ IDRSVPR++   GG ++AK  L  F+ ++L GY  ++   GE   S LSPYLHFG ISPLYV  ++       +E ++ F++ELV  RE+A +FV++N E YD +  AVP WA++TL +                                                  + YSLEELE  +THD  WNAAQ+EM +TG MH Y+RM+W K I+ W++  PEEAY +++YLN++Y LDGRD NG+ GV WCFG +DRP  G   +FG VR M   G++ K D+  Y++QV   +RK
Sbjct:   22 VVYWMQSSQRAEYNHALEYAIRQANRLEKSLVVYFGVTDGFPEANERHYAFMLEGLKETKAALEQRGIQLLIRKISPEQGALEMSGL------------------------AALLVVDRGYLRIDRQWRTALAEGARCAVVQIESNVVVPVELASPKEEYSAATLRSKLKKILPQCLAPLEETVCQHPSLASELPFEAYDVSDTEKALAGLA-IDRSVPRVSDYIGGTSEAKRWLEDFIENKLAGYSERKNRPGELFTSNLSPYLHFGQISPLYVYRRL---MGMDSESQQSFLEELVVRRELAINFVYYN-EQYDSFV-AVPDWAKKTLAK-------------------------------------------HLADEREYLYSLEELEAAKTHDDYWNAAQLEMNLTGKMHGYMRMYWAKKILEWSST-PEEAYSKAIYLNNKYLLDGRDPNGFAGVSWCFGKHDRPW-GERAIFGNVRFMNDKGLKRKFDMQLYMDQVAERSRK 454
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BLAST of NO04G04030 vs. NCBI_GenBank
Match: CZR04257.1 (dna photolyase class 2 [Trichococcus flocculiformis] >SFI20143.1 deoxyribodipyrimidine photo-lyase [Trichococcus flocculiformis])

HSP 1 Score: 334.0 bits (855), Expect = 1.100e-87
Identity = 200/508 (39.37%), Postives = 271/508 (53.35%), Query Frame = 0 
Query:   61 VVYWMQRSVRSTLNHALEMSIHHANNLGLPLIVVFAIVTSYPGANERGFAFLFEGLSEVQSLLAKRGIRMVVREAKPXXXXXXXXXXXXXXXXXXXXXVPDVVLDTCRRLNAPLLIMDRAYERLLRTWRDIVCTCINCPVLLVESDVVVPVEAASPRPLASAAALRRAHAPLLAQYLQPLPDTT--------TFAFDELDLSDPHALLSSLSGIDRSVPRITFKRGGPTQAKLHLARFLRDRLEGYQNKRKEAGERHQSFLSPYLHFGHISPLYVVEKVKKHTRSSAEDRRRFVDELVTWREMACHFVWWNREGYDRWEGAVPRWARETLLEGWRQAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAYSLEELEEGRTHDVLWNAAQMEMRVTGYMHNYLRMFWCKSIILWTAEGPEEAYRRSLYLNDRYFLDGRDCNGYMGVGWCFGLYDRPMPGRSPVFGKVRRMTTSGVRSKMDVGKYVEQVRHLARK 561
            VVYWMQ S R+  NHALE +I  AN L  PL V F I   +P ANER +AF+ EGL E ++ L +RGI+M++R+  P                                    LL++DR Y R+ R WR  +     C V+ VES+VVVPVE ASP+   SAA LR     +L   L  L +T            F+  D+SD    L+ L+ IDRSVPR++   GG  +AK  LA F+ ++L GY  ++   GE   S LSPYLHFG ISPLY+  ++       +E ++ F++ELV  RE+A +FV++N E YD +  AVP WA++TL                                                    + YS+EELE  +THD  WNAAQ+EM +TG MH Y+RM+W K I+ W++  PEEAYR+++YLN++Y LDGRD NG+ GV WCFG +DRP  G   +FG VR M   G++ K D+  Y++QV   ARK
Sbjct:   39 VVYWMQSSQRAEYNHALEYAIRQANLLEKPLFVYFGITDGFPEANERHYAFMLEGLKETKAALEQRGIQMLIRKISPEQGALEISGL------------------------TALLVVDRGYLRIERQWRAALAEGAECAVVQVESNVVVPVELASPKEEYSAATLRSKLKKILPHCLTSLEETVCQHPSLAFELPFEAYDVSDTEKALAGLA-IDRSVPRVSDYIGGTAEAKRWLADFIENKLAGYSERKNRPGESFTSNLSPYLHFGQISPLYIYRRL---MGMDSESQQSFLEELVVRRELAVNFVYYN-EQYDSY-AAVPDWAKKTL-------------------------------------------DKHLADEREYLYSVEELEAAKTHDDYWNAAQLEMNLTGKMHGYMRMYWAKKILEWSST-PEEAYRKAIYLNNKYLLDGRDPNGFAGVSWCFGKHDRPW-GERAIFGNVRFMNDKGLKRKFDMQLYLDQVAERARK 471
The following BLAST results are available for this feature:
BLAST of NO04G04030 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28754.12.200e-18756.18g-protein beta subunit 1 [Nannochloropsis gaditana... [more]
WP_086985638.12.100e-8939.17deoxyribodipyrimidine photolyase [Trichococcus col... [more]
CZR09658.12.100e-8939.76dna photolyase class 2 [Trichococcus sp. ES5] >SHG... [more]
WP_068562518.12.100e-8939.76MULTISPECIES: deoxyribodipyrimidine photolyase [Tr... [more]
WP_107995579.14.600e-8939.76deoxyribodipyrimidine photolyase [Trichococcus pal... [more]
WP_068623318.11.300e-8839.64MULTISPECIES: deoxyribodipyrimidine photolyase [Tr... [more]
PKN32881.15.100e-8839.05deoxyribodipyrimidine photolyase [Deltaproteobacte... [more]
WP_086943174.18.700e-8839.37deoxyribodipyrimidine photolyase [Trichococcus pas... [more]
WP_106449228.18.700e-8838.98deoxyribodipyrimidine photolyase [Trichococcus alk... [more]
CZR04257.11.100e-8739.37dna photolyase class 2 [Trichococcus flocculiformi... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL082nonsL082Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL080nonsL080Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR058ncniR058Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR110ngnoR110Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009392NSK009392Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G04030.1NO04G04030.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|660086gene_2185Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G04030.1NO04G04030.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G04030 ID=NO04G04030|Name=NO04G04030|organism=Nannochloropsis oceanica|type=gene|length=2608bp
ATGTCTGTCACAACTGCTACCAGCACCAGCACGCTGCCCTTACCGCCAGG
CGTGCATCGAAATCGTCTGAAGTGGCTCAAGGGAGGTGACTCACACGCAT
TAATTGTACCTCCCAACCGGGCCGCTTTGTCATCAGCGCCCTCCCCGTCT
TCCTACTCTCCCTCCGCCGCACCGCAATGCGTTGTCTACTGGATGCAACG
CAGCGTCCGTTCCACCCTTAATCATGCATTGGAAATGTCAATTCATCACG
CTAACAACCTAGGCCTCCCCCTTATTGTCGTTTTTGCAATCGTCACCTCC
TACCCAGGGGCAAACGAGCGAGGCTTTGCCTTCCTTTTTGAAGGGCTAAG
TGAAGTGCAGTCCCTGTTGGCCAAACGTGGAATTCGGATGGTGGTTCGTG
AAGCTAAACCTAAGGGTAGTGGTGATGGCGCAGGAGCAGCAGCAGATTCA
GCAGCGGCAGCAGCTTCAACAGCTGTACCAGACGTCGTCCTTGACACGTG
CCGTCGCCTCAATGCCCCCCTCCTAATAATGGATCGGGCGTATGAACGCC
TTTTAAGGACATGGCGTGATATCGTATGTACTTGCATCAATTGTCCTGTG
TTATTGGTCGAAAGCGACGTAGTCGTCCCTGTCGAAGCCGCCTCCCCTCG
TCCCCTGGCATCAGCAGCAGCTTTGCGACGTGCCCACGCCCCCTTGCTCG
CGCAATATTTGCAGCCATTGCCGGAgttagtcctgacgcacccttcagtg
gatttaccctgcttcgctccttctattcaccctaattcttccgcctcctt
gagcatgaaagccactcctaacccttcctccctcccccccccgacctctc
ttcccccccatccccaagCACCACCACCTTCGCTTTCGACGAGCTTGATC
TTTCAGACCCTCACGCTCTCCTTTCTTCCCTCTCCGGGATCGATCGCTCT
GTCCCCCGTATCACCTTCAAACGTGGTGGCCCTACTCAAGCCAAGCTTCA
CCTCGCTCGTTTTCTTCGTGACCGTCTTGAGGGATACCAGAACAAGAGGA
AAGAGGCGGGAGAACGACACCAGAGTTTCCTAAGTCCCTATCTACATTTC
GGGCATATCTCCCCTCTGTATGTGGTGGAAAAGGTGAAGAAACATACGCG
GAGTAGTGCGGAGGATAGAAGGCGGTTTGTCGATGAATTGGTTACATGGA
GAGAGATGGCTTGTCACTTCGTGTGGTGGAACAGGGAGGGTTATGATAGG
TGGGAGGGGGCCGTGCCGAGGTGGGCAAGGGAGACCTTGCTAGAGGGATG
GAGGCAAGCAGGGGGAGGAAGAGAGGAGGAGGGAGAAGGAGCTGGAGGGG
CGTCTGGTGGGAGTGGGGCGAGCGTTCTGGCGAGGGATGGAGGTGGAGGA
GGTGGGGGAGGAGGAAGAGGAGCTGGAGGAGGAGGAGGCCGCACTCATGC
ATATAGCTTGGAGGAGTTGGAGGAGGGACGGACGCATGACGTGCTTTGGA
ATGCGGCACAGATGGAGATGAGGGTGACGGGCTATATGCATAATTATCTG
AGAATGTTCTGgtgagtgtttgtgcttcctccttccttccatccttccct
ccatccttccctcacttcttccgatggataaagttccttttggctgtttt
gttgtttgtacgacgtgcattaatccgagcatccttcgcttcacatctct
ctctaccccttcctagGTGTAAAAGCATAATTCTTTGGACTGCCGAGGGG
CCGGAGGAGGCGTACCGGCGTTCTCTCTACCTCAACGATCGGTATTTTCT
CGATGGACGTGACTGCAATGGCTACATGGGCGTGGGATGGTGCTTTGGCT
TATACGATAGACCCATGCCGGGTCGGAGCCCCGTCTTCGGAAAGGTAAGG
CGAATGACGACGAGTGGTGTGCGGTCAAAAATGGATGTGGGAAAATATGT
AGAGCAAGTGAGGCATCTGGCAAGGAAGGTGAGAGAGGAAGGGAGGGAGG
GTAGTGAGGGACTGAAGGTGGAAGACGCTATCTATGCGACCCCAATGAAG
AGGAGCATAGAGACCTTTATTTCGTGGGATAGTGGTGAAGAAAGAGGAAG
AGGAGGAGGAGGAAGAGGAAGAGGAGGAGGAGGAGGAGGAAGAGGAGGAG
GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA
GGAGGCGGAGGCGGGGCAACACCGGCACCAGGGACGGAATATAGCGTAAG
TGGTGGTCGCCTGCCGCTGCTGCCGCCGAAAGGAGCAACAGATACCAAAA
AGCAGAAAATTACCGACTTTTTCTTTGGTGGAAGCGGCGGACGCGGAGGG
AAGAAGGAAGGAAAATAATGAGGAGCAGGTAGAATGTGAAGGCTTACACA
GATGCGTGTTCATAAACACCGACAGCGTTAGAGACAAAGCACCGGGTCAA
AAAAGCACAGACATCCCCACTAAAAACGAAGAATGCGCAAGGGGGAATAA
GAAGAATACAACATACAAAAAGCCGGAATTAGCAATTAGGCAGGTGAGGC
AGGAGGTTGGTCGAAAAATGGGCCCAGTGTAACTAAAACGCCGCGTCGTC
CCCTTTTT
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protein sequence of NO04G04030.1

>NO04G04030.1-protein ID=NO04G04030.1-protein|Name=NO04G04030.1|organism=Nannochloropsis oceanica|type=polypeptide|length=690bp
MSVTTATSTSTLPLPPGVHRNRLKWLKGGDSHALIVPPNRAALSSAPSPS
SYSPSAAPQCVVYWMQRSVRSTLNHALEMSIHHANNLGLPLIVVFAIVTS
YPGANERGFAFLFEGLSEVQSLLAKRGIRMVVREAKPKGSGDGAGAAADS
AAAAASTAVPDVVLDTCRRLNAPLLIMDRAYERLLRTWRDIVCTCINCPV
LLVESDVVVPVEAASPRPLASAAALRRAHAPLLAQYLQPLPDTTTFAFDE
LDLSDPHALLSSLSGIDRSVPRITFKRGGPTQAKLHLARFLRDRLEGYQN
KRKEAGERHQSFLSPYLHFGHISPLYVVEKVKKHTRSSAEDRRRFVDELV
TWREMACHFVWWNREGYDRWEGAVPRWARETLLEGWRQAGGGREEEGEGA
GGASGGSGASVLARDGGGGGGGGGRGAGGGGGRTHAYSLEELEEGRTHDV
LWNAAQMEMRVTGYMHNYLRMFWCKSIILWTAEGPEEAYRRSLYLNDRYF
LDGRDCNGYMGVGWCFGLYDRPMPGRSPVFGKVRRMTTSGVRSKMDVGKY
VEQVRHLARKVREEGREGSEGLKVEDAIYATPMKRSIETFISWDSGEERG
RGGGGRGRGGGGGGRGGGGGGGGGGGGGGGGGGGGGGGGATPAPGTEYSV
SGGRLPLLPPKGATDTKKQKITDFFFGGSGGRGGKKEGK*
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Synonyms
Publications