NO04G04020, NO04G04020 (gene) Nannochloropsis oceanica

Overview
NameNO04G04020
Unique NameNO04G04020
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1210
Alignment locationchr4:1077610..1078819 -

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Properties
Property NameValue
DescriptionG-protein beta subunit 1
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:1077610..1078819 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
GO:0007165signal transduction
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR017986WD40_repeat_dom
IPR016346Guanine_nucleotide-bd_bsu
IPR001680WD40_repeat
IPR020472G-protein_beta_WD-40_rep
IPR001632Gprotein_B
Homology
BLAST of NO04G04020 vs. NCBI_GenBank
Match: EWM28754.1 (g-protein beta subunit 1 [Nannochloropsis gaditana])

HSP 1 Score: 385.6 bits (989), Expect = 1.700e-103
Identity = 235/285 (82.46%), Postives = 249/285 (87.37%), Query Frame = 0
Query:    7 SLAERIEQAKTKAQTLKTEIEEIRKQKDNATLPGAARSQSLPKFEDKMPRVRRVLKGHFGKVYSMHWAHDGTQLISASQDGKLIIWNAHTTNKNQSISLRSSWVMTCCFEQTTGSLVACGGLDNVCSVYRVGGPGSSASSSAAAQSAVRPAHELMAHDGYLSCCRFLDEGSLLTSSGDSTCIFWDVEKNEAITSFADHGGDVMSLSVLPSVSRQVFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNAVGTGSDDSTCRLFDLRSYGEVNVFGNDK 292
            SL +RIEQAK KAQTLK EIEE+RKQKDNA LPGAA +Q LP F++K+ R+RR+LKGHFGKVYSMHWA   TQL+SASQDGKLIIWNAHTTNK QSI LRSSWVMTCCFEQT G+LVACGGLDNVCSVYRV GPG  A SS   QSA+RPAHEL+AHDGYLSCCRF+DE SLLTSSGDSTCIFWDVEKNEAITSFADHGGDVMSLSVLPS      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       SDDSTCRLFD+RSYG VNVFGNDK
Sbjct:  728 SLGDRIEQAKCKAQTLKKEIEEVRKQKDNAMLPGAANNQQLPDFKNKIIRIRRILKGHFGKVYSMHWAQKSTQLVSASQDGKLIIWNAHTTNKVQSIPLRSSWVMTCCFEQTNGALVACGGLDNVCSVYRVSGPGMPAPSSPTGQSAIRPAHELIAHDGYLSCCRFIDEQSLLTSSGDSTCIFWDVEKNEAITSFADHGGDVMSLSVLPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDSTCRLFDIRSYGAVNVFGNDK 1012          
BLAST of NO04G04020 vs. NCBI_GenBank
Match: CBJ48797.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 268.5 bits (685), Expect = 3.100e-68
Identity = 178/288 (61.81%), Postives = 210/288 (72.92%), Query Frame = 0
Query:    6 SSLAERIEQAKTKAQTLKTEIEEIRKQKDNATLPGAARSQSLPKFEDKMPRVRRVLKGHFGKVYSMHWAHDGTQLISASQDGKLIIWNAHTTNKNQSISLRSSWVMTCCFEQTTGSLVACGGLDNVCSVYRVGGPGSSASSSAAAQSAVRPAHELMAHDGYLSCCRFLDEGSLLTSSGDSTCIFWDVEKNEAITSFADHGGDVMSLSVLPSVSRQVFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNAVGTGSDDSTCRLFDLRSYGEVNVFGNDKIV 294
            + + ER+  A+ KA+ LK+EI + +  K + ++  AA    L      + + RRVLKGHFGKVY+MHW+ D   L+SASQDGKLIIWN +TTNK Q+I LRSSWVMTC FE T G  VACGGLDN+CS+Y +G             + +R   EL AHDGYLSCCRF+++ S+LTSSGDSTCI WDVE       F DHGGDVMS+S+LPS      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG A GTGSDDS+CRLFD+R YGE N FGNDKI+
Sbjct:    2 ADMTERLAVARKKAEALKSEIAKAQNDKKDCSIQEAAAQIDLKNLGPGL-KARRVLKGHFGKVYAMHWSGDNQNLVSASQDGKLIIWNGYTTNKVQAIPLRSSWVMTCAFEPTQGRFVACGGLDNLCSIYELG-----------QSTVMRATRELAAHDGYLSCCRFVNQESILTSSGDSTCIIWDVEMGVTTAHFTDHGGDVMSVSILPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKAFGTGSDDSSCRLFDMRCYGEANYFGNDKIL 277          
BLAST of NO04G04020 vs. NCBI_GenBank
Match: XP_002293634.1 (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >EED89370.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 262.7 bits (670), Expect = 1.700e-66
Identity = 174/272 (63.97%), Postives = 211/272 (77.57%), Query Frame = 0
Query:   22 LKTEIEEIRKQKDNATLPGAARSQSLPKF-EDKMPRVRRVLKGHFGKVYSMHWAHDGTQLISASQDGKLIIWNAHTTNKNQSISLRSSWVMTCCFEQTTGSLVACGGLDNVCSVYRVGGPGSSASSSAAAQSAVRPAHELMAHDGYLSCCRFLDEGSLLTSSGDSTCIFWDVEKNEAITSFADHGGDVMSLSVLPSVSRQVFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNAVGTGSDDSTCRLFDLRSYGEVNVFGNDKI 293
            LK++IE+ R  K N+T+   A S+SL    +    ++RR LKGHFGKVY+MHW  D   L+SASQDGKLIIWNA TTNK Q+I LRSSWVMTC FEQ+ G+L+ACGGLDNVCS+Y         ++  A+ S  R + EL+AHDGYLSCCRF+DEG ++TSSGDSTCI+WDV   E + +F+DH  DVMS+++ P  +  +FXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  A GTGSDD++CRLFD+RSYGEVN F +DKI
Sbjct:    2 LKSQIEKARASKQNSTMGSIASSKSLRDIRKPPQTKLRRTLKGHFGKVYAMHWNSDSQTLVSASQDGKLIIWNAFTTNKVQAIPLRSSWVMTCAFEQSKGNLIACGGLDNVCSIY---------NTQQASTSNARASKELVAHDGYLSCCRFVDEGHVVTSSGDSTCIYWDVNSGEVLKTFSDHKSDVMSVAISPE-NNNIFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFGTGSDDASCRLFDMRSYGEVNKFKSDKI 263          
BLAST of NO04G04020 vs. NCBI_GenBank
Match: XP_008879352.1 (hypothetical protein H310_13580 [Aphanomyces invadans] >XP_009843691.1 hypothetical protein H257_16817 [Aphanomyces astaci] >ETV66888.1 hypothetical protein H257_16817 [Aphanomyces astaci] >ETV92055.1 hypothetical protein H310_13580 [Aphanomyces invadans])

HSP 1 Score: 257.7 bits (657), Expect = 5.500e-65
Identity = 173/282 (61.35%), Postives = 209/282 (74.11%), Query Frame = 0
Query:   12 IEQAKTKAQTLKTEIEEIRKQKDNATLPGAARSQSLPKFEDKMPRVRRVLKGHFGKVYSMHWAHDGTQLISASQDGKLIIWNAHTTNKNQSISLRSSWVMTCCFEQTTGSLVACGGLDNVCSVYRVGGPGSSASSSAAAQSAVRPAHELMAHDGYLSCCRFLDEGSLLTSSGDSTCIFWDVEKNEAITSFADHGGDVMSLSVLPSVSRQVFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNAVGTGSDDSTCRLFDLRSYGEVNVFGNDKIV 294
            + + K K   LK +I+ +R  K N        ++++P      P+ RRVLKGHFGK+Y+M W  D T L+SASQDGKLI+WNA TTNK Q+I LRSSWVMTC +EQ   ++VACGGLDN+CS+Y++G               +R   EL AHDGYLSCCRFLDE +++TSSGDSTCI WDVE  E  T+F DH GDVMS+S+ P   + + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNA+GTGSDDS+CRLFDLR+YGE+N F NDKI+
Sbjct:    4 VAELKKKCDGLKDKIQSVRTAKSNGGFENDG-TKAIP----PAPKCRRVLKGHFGKIYAMQWGGDSTSLVSASQDGKLIVWNAQTTNKVQAIPLRSSWVMTCAYEQKQRNMVACGGLDNLCSIYQLG-----------QAQVMRATKELAAHDGYLSCCRFLDEANIITSSGDSTCILWDVESGEVKTTFKDHTGDVMSVSINPH-HQNMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNALGTGSDDSSCRLFDLRAYGELNNFSNDKIL 268          
BLAST of NO04G04020 vs. NCBI_GenBank
Match: OQR82884.1 (guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta [Achlya hypogyna])

HSP 1 Score: 255.4 bits (651), Expect = 2.700e-64
Identity = 172/282 (60.99%), Postives = 209/282 (74.11%), Query Frame = 0
Query:   12 IEQAKTKAQTLKTEIEEIRKQKDNATLPGAARSQSLPKFEDKMPRVRRVLKGHFGKVYSMHWAHDGTQLISASQDGKLIIWNAHTTNKNQSISLRSSWVMTCCFEQTTGSLVACGGLDNVCSVYRVGGPGSSASSSAAAQSAVRPAHELMAHDGYLSCCRFLDEGSLLTSSGDSTCIFWDVEKNEAITSFADHGGDVMSLSVLPSVSRQVFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNAVGTGSDDSTCRLFDLRSYGEVNVFGNDKIV 294
            + + K K + LK +I+ +R QK N        ++++P      P+ RRVLKGHFGK+Y+M W  D + L+SASQDGKLI+WNA TTNK Q+I LRSSWVMTC +EQ   ++VACGGLDN+CS+Y +G               +R A EL AHDGYLSCCRF+DE +++TSSGDSTCI WDVE  E  T+F DH GDVMS+++ P     + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG A+GTGSDDS+CRLFDLR+YGEVN F NDKI+
Sbjct:    4 VAELKKKCEALKDKIQSVRTQKSNGGFENDG-TKAIP----PAPKCRRVLKGHFGKIYAMQWGGDSSSLVSASQDGKLIVWNAMTTNKVQAIPLRSSWVMTCAYEQKQRNMVACGGLDNLCSIYHLG-----------QAQVMRAAKELAAHDGYLSCCRFIDETNIITSSGDSTCILWDVESGEVKTTFKDHTGDVMSVAINPH-HPNMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTALGTGSDDSSCRLFDLRAYGEVNNFSNDKIL 268          
BLAST of NO04G04020 vs. NCBI_GenBank
Match: OQS02095.1 (guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta [Thraustotheca clavata])

HSP 1 Score: 255.0 bits (650), Expect = 3.600e-64
Identity = 172/282 (60.99%), Postives = 208/282 (73.76%), Query Frame = 0
Query:   12 IEQAKTKAQTLKTEIEEIRKQKDNATLPGAARSQSLPKFEDKMPRVRRVLKGHFGKVYSMHWAHDGTQLISASQDGKLIIWNAHTTNKNQSISLRSSWVMTCCFEQTTGSLVACGGLDNVCSVYRVGGPGSSASSSAAAQSAVRPAHELMAHDGYLSCCRFLDEGSLLTSSGDSTCIFWDVEKNEAITSFADHGGDVMSLSVLPSVSRQVFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNAVGTGSDDSTCRLFDLRSYGEVNVFGNDKIV 294
            +   K K + LK +I+ +R QK N        ++++P      P+ RRVLKGHFGK+Y+M W  D T L+SASQDGKLI+WNA +TNK Q+I LRSSWVMTC +EQ   ++VACGGLDN+CS+Y +G               +R A EL AHDGYLSCCRF+DE +++TSSGDSTCI WDVE  E  T+F DH GDVMS+++ P     + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG A+GTGSDDS+CRLFDLR+YGEVN F NDKI+
Sbjct:    4 VADLKKKCEALKDKIQSVRSQKSNGGFENDG-TKAIP----PAPKCRRVLKGHFGKIYAMQWGGDSTSLVSASQDGKLIVWNAMSTNKVQAIPLRSSWVMTCAYEQKQRNMVACGGLDNLCSIYHLG-----------QAQVMRAAKELAAHDGYLSCCRFIDETNIITSSGDSTCILWDVESGEVKTTFKDHTGDVMSVAINPH-HPNMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTALGTGSDDSSCRLFDLRAYGEVNNFSNDKIL 268          
BLAST of NO04G04020 vs. NCBI_GenBank
Match: XP_008607886.1 (guanine nucleotide-binding protein subunit beta [Saprolegnia diclina VS20] >XP_012198423.1 guanine nucleotide-binding protein subunit beta [Saprolegnia parasitica CBS 223.65] >XP_012210573.1 guanine nucleotide-binding protein subunit beta [Saprolegnia parasitica CBS 223.65] >EQC38294.1 guanine nucleotide-binding protein subunit beta [Saprolegnia diclina VS20] >KDO18713.1 guanine nucleotide-binding protein subunit beta [Saprolegnia parasitica CBS 223.65] >KDO30721.1 guanine nucleotide-binding protein subunit beta [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 253.4 bits (646), Expect = 1.000e-63
Identity = 166/282 (58.87%), Postives = 205/282 (72.70%), Query Frame = 0
Query:   12 IEQAKTKAQTLKTEIEEIRKQKDNATLPGAARSQSLPKFEDKMPRVRRVLKGHFGKVYSMHWAHDGTQLISASQDGKLIIWNAHTTNKNQSISLRSSWVMTCCFEQTTGSLVACGGLDNVCSVYRVGGPGSSASSSAAAQSAVRPAHELMAHDGYLSCCRFLDEGSLLTSSGDSTCIFWDVEKNEAITSFADHGGDVMSLSVLPSVSRQVFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNAVGTGSDDSTCRLFDLRSYGEVNVFGNDKIV 294
            + + K K + LK +I+ +R QK N        ++++P      P+ RRVLKGHFGK+Y+M W  D + L+SASQDGKLI+WNA TTNK Q+I LRSSWVMTC +EQ   ++VACGGLDN+CS+Y +G               +R A EL AHDGYLSCCRF+DE +++TSSGDSTCI WDVE  E  T+F DH GDVMS+++  ++   + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     G A+GTGSDDS+CRLFDLR+YGEVN F NDKI+
Sbjct:    4 VAELKKKCEGLKDKIQAVRSQKSNGGFENDG-TKAIP----AAPKCRRVLKGHFGKIYAMQWGGDSSSLVSASQDGKLIVWNAMTTNKVQAIPLRSSWVMTCAYEQKQRNMVACGGLDNLCSIYHLG-----------QAQVMRAAKELAAHDGYLSCCRFIDETNIITSSGDSTCILWDVESGEVKTTFKDHTGDVMSVAI-SALHPNMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFFPNGTALGTGSDDSSCRLFDLRAYGEVNNFSNDKIL 268          
BLAST of NO04G04020 vs. NCBI_GenBank
Match: EJK61374.1 (hypothetical protein THAOC_18152 [Thalassiosira oceanica])

HSP 1 Score: 252.3 bits (643), Expect = 2.300e-63
Identity = 165/237 (69.62%), Postives = 191/237 (80.59%), Query Frame = 0
Query:   56 RVRRVLKGHFGKVYSMHWAHDGTQLISASQDGKLIIWNAHTTNKNQSISLRSSWVMTCCFEQTTGSLVACGGLDNVCSVYRVGGPGSSASSSAAAQSAVRPAHELMAHDGYLSCCRFLDEGSLLTSSGDSTCIFWDVEKNEAITSFADHGGDVMSLSVLPSVSRQVFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNAVGTGSDDSTCRLFDLRSYGEVNVFGNDKI 293
            ++RR LKGHFGKVY+MHWA D   L+SASQDGKLIIWNA+TTNK Q+I LRSSWVMTC FEQT G L+ACGGLDNVCS+Y +    ++A          R   EL+AHDGYLSCCRF+DEG +LTSSGDS+CI+WDV   + + +F DH  DVMS++V P+ +  VFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX NA  TGSDDS+CRLFD+RSYGEVN F +DKI
Sbjct:   68 KMRRTLKGHFGKVYAMHWASDSQTLVSASQDGKLIIWNAYTTNKVQAIPLRSSWVMTCAFEQTKGDLIACGGLDNVCSIYNINQQTANA----------RATTELVAHDGYLSCCRFIDEGHILTSSGDSSCIYWDVSSGDVLKTFTDHTSDVMSVAVSPN-NPSVFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAFSTGSDDSSCRLFDMRSYGEVNKFKSDKI 293          
BLAST of NO04G04020 vs. NCBI_GenBank
Match: ETL25877.1 (hypothetical protein L916_20344 [Phytophthora parasitica] >ETP01902.1 hypothetical protein F441_20939 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 248.8 bits (634), Expect = 2.600e-62
Identity = 169/280 (60.36%), Postives = 206/280 (73.57%), Query Frame = 0
Query:   14 QAKTKAQTLKTEIEEIRKQKDNATLPGAARSQSLPKFEDKMPRVRRVLKGHFGKVYSMHWAHDGTQLISASQDGKLIIWNAHTTNKNQSISLRSSWVMTCCFEQTTGSLVACGGLDNVCSVYRVGGPGSSASSSAAAQSAVRPAHELMAHDGYLSCCRFLDEGSLLTSSGDSTCIFWDVEKNEAITSFADHGGDVMSLSVLPSVSRQVFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNAVGTGSDDSTCRLFDLRSYGEVNVFGNDKIV 294
            + K K ++LK  IE+ R+ K +     A  S    K     P+ RR+LKGHFGK+Y+M W  D + L+SASQDGKLI+WNA TTNK Q+I LRSSWVMTC FEQ   ++VACGGLDN+CS++ +           + +  +R   EL AHDGYLSCCRF+DE S++TSSGDS CI WDVE  E  T+F +H GDVMS+S+ P  +  + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX NA+GTGSDDS+CRLFDLR+YGE+N F NDKI+
Sbjct:    6 ELKKKCESLKETIEKTREAKSDGGFQSANASAG-AKAIPAPPKCRRLLKGHFGKIYAMQWGGDSSSLVSASQDGKLIVWNAQTTNKIQAIPLRSSWVMTCAFEQKQRNMVACGGLDNLCSIFHL-----------SQEQVMRATKELAAHDGYLSCCRFIDEASIVTSSGDSNCILWDVESGEVKTTFREHSGDVMSVSINPH-NPSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNALGTGSDDSSCRLFDLRAYGELNNFSNDKIL 272          
BLAST of NO04G04020 vs. NCBI_GenBank
Match: GBG26632.1 (Guanine nucleotide-binding protein subunit beta-1 [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 248.8 bits (634), Expect = 2.600e-62
Identity = 130/283 (45.94%), Postives = 172/283 (60.78%), Query Frame = 0
Query:   13 EQAKTKAQTLKTEIEEIRKQKDNATLPGAARSQSLPKFEDKMPRVRRVLKGHFGKVYSMHWA--HDGTQLISASQDGKLIIWNAHTTNKNQSISLRSSWVMTCCFEQTTGSLVACGGLDNVCSVYRVGGPGSSASSSAAAQSAVRPAHELMAHDGYLSCCRFLDEGSLLTSSGDSTCIFWDVEKNEAITSFADHGGDVMSLSVLPSVSRQVFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNAVGTGSDDSTCRLFDLRSYGEVNVFGNDKIV 294
            +  K K Q L+ E++ ++++  N T+     +Q++    +   + RR LKGHFGKVY+MHWA      +L+SASQDGKLI+WNA TT K Q+I LRSSWVMTC FEQ T  +VACGGLDN+CS+Y+V G  ++ S         R   EL AHDGYLSCCRF+   ++LTSSGDSTCI+WD+E+ E ++SF DH GDVMS++V P+  R +F                                      G   GTGSDDS+CR+FDLR Y EVN F +D+I+
Sbjct:    4 KDGKAKLQALREELQSLKEKGHNGTM----ETQTISPLPNSTFKARRQLKGHFGKVYAMHWAGKSSAEELVSASQDGKLIVWNAQTTFKKQAIPLRSSWVMTCAFEQDTNQMVACGGLDNLCSIYKVDGETTTTS---------RATKELQAHDGYLSCCRFIGSQNILTSSGDSTCIYWDIERGEPLSSFTDHNGDVMSVAVHPT-DRNLFVSGSCDATSKLFDIRQQGCVATFVGHESDINAVNFFPNGMCFGTGSDDSSCRMFDLRCYQEVNTFMSDRIL 272          
The following BLAST results are available for this feature:
BLAST of NO04G04020 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28754.11.700e-10382.46g-protein beta subunit 1 [Nannochloropsis gaditana... [more]
CBJ48797.13.100e-6861.81conserved unknown protein [Ectocarpus siliculosus][more]
XP_002293634.11.700e-6663.97predicted protein, partial [Thalassiosira pseudona... [more]
XP_008879352.15.500e-6561.35hypothetical protein H310_13580 [Aphanomyces invad... [more]
OQR82884.12.700e-6460.99guanine nucleotide-binding protein G(I)/G(S)/G(T) ... [more]
OQS02095.13.600e-6460.99guanine nucleotide-binding protein G(I)/G(S)/G(T) ... [more]
XP_008607886.11.000e-6358.87guanine nucleotide-binding protein subunit beta [S... [more]
EJK61374.12.300e-6369.62hypothetical protein THAOC_18152 [Thalassiosira oc... [more]
ETL25877.12.600e-6260.36hypothetical protein L916_20344 [Phytophthora para... [more]
GBG26632.12.600e-6245.94Guanine nucleotide-binding protein subunit beta-1 ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL082nonsL082Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL080nonsL080Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR058ncniR058Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR110ngnoR110Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009393NSK009393Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G04020.1NO04G04020.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|660082gene_2184Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100002g133gene1805Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G04020.1NO04G04020.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G04020 ID=NO04G04020|Name=NO04G04020|organism=Nannochloropsis oceanica|type=gene|length=1210bp
ATGGGGGAAGTGGGCAGCAGTTTGGCCGAACGCATAGAACAAGCCAAAAC
GAAGGCACAGACGCTAAAAACGGAGATTGAGGAAATAAGAAAACAAAAAG
ACAATGCTACCCTGCCAGGTGCTGCTAGGAGCCAGTCTTTGCCCAAATTT
GAGGACAAAATGCCCAGGGTACGAAGGGTGCTCAAAGGCCATTTTGGCAA
GGTCTACTCCATGCATTGGGCGCACGACGGCACACAGCTCATCTCGGCCT
CGCAAGACGGCAAGCTCATCATTTGGAACGCTCACACCACAAACAAGAAT
CAATCCATCTCCCTTCGCTCCTCTTGGGTCATGACCTGCTGCTTCGAACA
AACGACGGGCTCTTTGGTGGCGTGCGGCGGGTTGGACAATGTTTGCTCTG
TCTACCGCGTTGGCGGGCCCGGGAGCTCCGCTTCCTCCTCTGCCGCAGCA
CAATCGGCGGTGAGACCTGCCCATGAGCTCATGGCTCACGACGGATATCT
GTCTTGCTGCCGCTTTTTGGACGAGGGAAGCTTGTTGACCTCCTCGGGGG
ACTCAACGTGCATTTTTTGGGATGTGGAGAAGAATGAGGCGATTACTTCT
TTCGCGGACCATGGAGGGGATGTGATGAGCCTTTCGGTTTTACCCAGCGT
GAGTCGACAGGTGTTCGTCTCGGGATCGTGCGATGCGACGGCTAAGGTGT
GGGACATCCGGTCGGGGAAGTGTGTACAGACATTCATAGGGCATGAAAGT
GACGTGAACTCGGTGCAGTTTTTCCCAGACGGGAATGCTGTCGGCACTGG
ATCGGACGATTCGACATGCCGTCTGTTTGATTTGCGGTCATACGGCGAGG
TGAATGTGTTTGGGAACGATAAAATTGTTTCAGGGGTCACGAGTGTGGCG
TTCTCAGCCTCGGGCCGGGTGCTATTCGCCGGCCACGATGATTCGAGTTG
TGTGGGTTGGGATACGATTGGGGAGGGAAAGAACGTCGCTTTTCAATTGG
CAGGGCATGACAGCCGCGTATCGTGCCTTGGAATGAATAGCAAGGGGGAG
GCTTTGTGCACGGGCTCGTGGGATTCGTTGTTAAAGGTGTGGGCGTAGTA
GGAGGCAGGAAGGGAAGGGAGGGGCATGACCATATGGTGTGAGTGAATGT
GTGCGTGCTCGGAAAAAATGGAAAAGGAAAAGGAAAAGAGAAGAAAGCGT
GGGTATAGGG
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protein sequence of NO04G04020.1

>NO04G04020.1-protein ID=NO04G04020.1-protein|Name=NO04G04020.1|organism=Nannochloropsis oceanica|type=polypeptide|length=366bp
MGEVGSSLAERIEQAKTKAQTLKTEIEEIRKQKDNATLPGAARSQSLPKF
EDKMPRVRRVLKGHFGKVYSMHWAHDGTQLISASQDGKLIIWNAHTTNKN
QSISLRSSWVMTCCFEQTTGSLVACGGLDNVCSVYRVGGPGSSASSSAAA
QSAVRPAHELMAHDGYLSCCRFLDEGSLLTSSGDSTCIFWDVEKNEAITS
FADHGGDVMSLSVLPSVSRQVFVSGSCDATAKVWDIRSGKCVQTFIGHES
DVNSVQFFPDGNAVGTGSDDSTCRLFDLRSYGEVNVFGNDKIVSGVTSVA
FSASGRVLFAGHDDSSCVGWDTIGEGKNVAFQLAGHDSRVSCLGMNSKGE
ALCTGSWDSLLKVWA*
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Synonyms
Publications