NO04G03780, NO04G03780 (gene) Nannochloropsis oceanica

Overview
NameNO04G03780
Unique NameNO04G03780
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3301
Alignment locationchr4:1018775..1022075 +

Link to JBrowse

Properties
Property NameValue
Descriptioncationic amino acid transporter 9
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:1018775..1022075 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO:0006122mitochondrial electron transport, ubiquinol to cytochrome c
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0005750mitochondrial respiratory chain complex III
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR036544QCR7_sf
IPR002293AA/rel_permease1
IPR029485CAT_C
IPR003197QCR7
Homology
[Close]
BLAST of NO04G03780 vs. NCBI_GenBank
Match: OMO69588.1 (Amino acid/polyamine transporter I [Corchorus capsularis])

HSP 1 Score: 230.3 bits (586), Expect = 1.500e-56
Identity = 175/563 (31.08%), Postives = 255/563 (45.29%), Query Frame = 0 
Query:    4 SSKSASFWSHLLGRAFHKKCDAEEPGLRPPSPTESFKSSSGKDGHHVFHHLKRQLGFWQLTMLGVGGSIGAGVFSLTGVAAASAGPAVVFSFIFSGIIAAIDALCYSEMASRYPQ-AGTVFLYNHITF------------------------------------------GELPALLGHRDG----------------------------------------------------GRTKCDFDEYQ----------------VFFSYVGFDTIASSSEECKDPLRDLPRAILVSLGVCVGIYCVVCLILTGMVPYDMIDLAAPLSSAFAGLGLAWVPAVISLGGVVGLATTLLIGLFAQARIWLGIARDGLLPGFLAEIHPRFKTPFRAQMLCGVLPMCLSAFFNVKLLAELLDVGVILAYGTVCAAVLVQRSTTRVN-------TTRW---LVLLLPACALPFA---LHKYNVHTGIWAMDTILLLLPIAALVPLVRPGDYPAPAHGVCFACPAVPYLPLAGVVLNVYLGVNLNSAAWLRLAVLWAGLLVHYVWTEHQYFHGN 443
            SS  +SF+SH    A   K       L P     S++++SG+D       L R+LG   L +LG+G SIGAG+F +TG  A  AGP V  SFI +G    ++ALCY+E+ASR+P   G  +LY++  F                                          G +PA +G                                                        G  + D D +                 VFFSYVGFD +A+S+EE K P RDLP  IL SL VCV +Y  VCL++TGMVPY ++   APL+ AF   GL +V  +IS+G V GL TTLL+GL+ Q+R++LG+ RDGLLP   A++HP+  TP  +Q+  G++   L   FNV +L+ +L VG +  Y  V A V+  R   +          + W   ++ L+   +  FA   L++Y+       +  ++ LL  AAL          A +  + F+CP VP LP   +  N++L   L+  AW+R  VL   ++   ++  +  FH N
Sbjct:   12 SSSPSSFFSHFCSSALRAKT------LNP----SSYRTASGRD------DLVRRLGVLDLLLLGIGASIGAGIFVVTGTVARDAGPGVTISFILAGASCVLNALCYAELASRFPAVVGGAYLYSYTAFNEITAFLVFMQLMLDYHIGAASIARSLASYVAALFELIPGLKGNIPAWIGQGGQEFFGGTLSINILAPVLLVLLTIILCWGVGESSAVNSFMTATKVVIVIFVVIVGAFEVDVDNWSPFAPNGVKEILTGATVVFFSYVGFDAVANSAEESKRPQRDLPIGILGSLLVCVVLYVGVCLVITGMVPYYLLGEEAPLADAFTSKGLKYVSILISIGAVAGLTTTLLVGLYVQSRLYLGLGRDGLLPSLFAKVHPKRHTPIHSQIWVGIVAAVLGGIFNVHVLSHILSVGSLTGYSVVAACVVTLRWKNKTGNPASSKCVSTWCEGVICLIIVASCGFATGVLYRYDASFIYIIVAAVIALLSCAALCL------RQAYSDALGFSCPGVPVLPSVCIFFNIFLFAQLHYEAWIRFIVL--SIISVSIYAFYGQFHAN 550
[Close]
BLAST of NO04G03780 vs. NCBI_GenBank
Match: XP_013728010.1 (cationic amino acid transporter 9, chloroplastic [Brassica napus] >XP_013728011.1 cationic amino acid transporter 9, chloroplastic [Brassica napus])

HSP 1 Score: 228.8 bits (582), Expect = 4.300e-56
Identity = 174/560 (31.07%), Postives = 254/560 (45.36%), Query Frame = 0 
Query:    7 SASFWSHLLGRAFHKKCDAEEPGLRPPSPTESFKSSSGKDGHHVFHHLKRQLGFWQLTMLGVGGSIGAGVFSLTGVAAASAGPAVVFSFIFSGIIAAIDALCYSEMASRYPQ-AGTVFLYNHITFGELPALL------------------------------------------------------------------------GHRD---------------------GGRTKCDFDEYQ----------------VFFSYVGFDTIASSSEECKDPLRDLPRAILVSLGVCVGIYCVVCLILTGMVPYDMIDLAAPLSSAFAGLGLAWVPAVISLGGVVGLATTLLIGLFAQARIWLGIARDGLLPGFLAEIHPRFKTPFRAQMLCGVLPMCLSAFFNVKLLAELLDVGVILAYGTVCAAVLVQR---STTRVNTTRW--------LVLLLPACALPFALHKYNVHTGIWAMDTILLLLPIAALVPLVRPGDYP---APAHGVCFACPAVPYLPLAGVVLNVYLGVNLNSAAWLRLAVLWAGLLVHYVWTEHQYFHGN 443
            SA+++S L   A   K       L PPS   + +S+SG         L R+LG + L +LGVG SIGAGVF +TG  A  AGP V  SF+ +G    ++ALCY+E+ASR+P   G  ++Y++  F E+ A L                                                                        G R+                      G    D   +                 VFFSYVGFD +A+S+EE  +P RDLP  I+ SL VC+ +Y  VCL+LTGMVP+ ++   APL+ AF+  G+ +V  +IS+G V GL TTLL+GL+ Q+R++LG+ RDGLLP F + IHP   TP  +Q+ CG++   L+  FNV  L+ +L VG +  Y  V A V+  R   +  R ++ RW        + L++ AC+   A   Y      ++   I LLL +   V       Y    A + G  F CP VP +P   +  N++L   L+  AW+R  V+   +L   V+  +  +H +
Sbjct:   14 SATWFSQLCASARRFK------SLAPPSLETAVRSTSGDS-------LVRRLGLFDLILLGVGASIGAGVFVVTGTVARDAGPGVTISFLLAGASCVLNALCYAELASRFPAVVGGAYMYSYSAFNEITAFLVFVQLMLDYHIGAASISRSLASYAVALLELFPAFKGCIPLWIGSGQELFGGFLSFNILAPILLALLTLVLCQGVRESSAVNSVMTATKVVIVLVVICAGAFDIDVANWSPFAPNGFKAVLTGATVVFFSYVGFDAVANSAEESNNPQRDLPIGIMGSLLVCISLYIGVCLVLTGMVPFSLLSEDAPLAEAFSSKGMKFVSILISIGAVAGLTTTLLVGLYVQSRLYLGLGRDGLLPSFFSRIHPTLHTPLHSQIWCGIVAAVLAGIFNVHSLSHILSVGTLTGYSVVAACVVALRLNDNKERESSNRWTSSWHEGVICLVIIACSGFGAGVFYR-----FSASVIFLLLSVGVAVSASAVLHYRRAYAQSLGSGFCCPGVPIVPCVCIFFNIFLFAQLHYEAWIRFVVV--SVLATAVYALYGQYHAD 553
[Close]
BLAST of NO04G03780 vs. NCBI_GenBank
Match: XP_019461736.1 (PREDICTED: cationic amino acid transporter 9, chloroplastic [Lupinus angustifolius] >OIW01163.1 hypothetical protein TanjilG_17720 [Lupinus angustifolius])

HSP 1 Score: 228.8 bits (582), Expect = 4.300e-56
Identity = 170/536 (31.72%), Postives = 242/536 (45.15%), Query Frame = 0 
Query:    4 SSKSASFWSHLLGRAFHKKCDAEEPGLRPPSPTESFKSSSGKDGHHVFHHLKRQLGFWQLTMLGVGGSIGAGVFSLTGVAAASAGPAVVFSFIFSGIIAAIDALCYSEMASRYPQ-AGTVFLYNHITFGELPALL------------------------------------------GHRD--------------------------------------------------GGRTKCDFDEYQ----------------VFFSYVGFDTIASSSEECKDPLRDLPRAILVSLGVCVGIYCVVCLILTGMVPYDMIDLAAPLSSAFAGLGLAWVPAVISLGGVVGLATTLLIGLFAQARIWLGIARDGLLPGFLAEIHPRFKTPFRAQMLCGVLPMCLSAFFNVKLLAELLDVGVILAYGTVCAAVLVQRSTTRVNT-------TRWLVLLLPACALPFALHKYNVHTGIWAMDTILLLLPIAALVPLVRPGDYPAPAHGVCFACPAVPYLPLAGVVLNVYLGVNLNSAAWLRLAVL 424
            SS S+S +SH L  A   K        R  SP+E   +  G D     H L R+LG + L +LGVG SIGAG+F +TG  A   GP V  SFI +G    I+ALCY+E+ASR+P   G  +LY +  F EL A L                                          GH +                                                   G  + D   +                 VFF+YVGFD +A+S+EE K P RDLP  I+ SL +C+ +Y  VCL++TGMVPY  +   APL+ AF   GL +V  +IS+G V GL TTLL+GL+ Q+R++LG+ RDGLLP   A++H    TP  +Q+  G++   L+  FNV++L+ +L VG +  Y  V A V+  R   R N+          ++ L+    L F    +  +   +    + ++L +     LV    Y A A G  F+CP VP LP   +  N++L   L+S AW+R  ++
Sbjct:   10 SSSSSSVFSHFLSSALRTK--------RLLSPSEK-AAVDGSD-----HGLSRRLGVFDLILLGVGASIGAGIFVVTGTVARDVGPGVTISFILAGASCVINALCYAELASRFPAVVGGAYLYAYTAFNELTAFLVFAQLMLDYHIGAASIARSLASYVVNILELFPIFKDNIPNWIGHGENIGDVLSINVLAPILLMLLTLILCRGVEESSVVNSLMTITKVVIVIIVIFAGAFEVDVSNWSPFVPNGMGSVFTGATVVFFAYVGFDAVANSAEESKKPQRDLPIGIIGSLIICIALYIGVCLVITGMVPYTFLGEDAPLAEAFESKGLKFVSVLISVGAVAGLTTTLLVGLYVQSRLYLGLGRDGLLPSIFAKVHIIRHTPIHSQVWAGIVASVLAGLFNVRMLSHILSVGTLTGYSVVSACVVALRWKDRANSQVSSSSKQEGVICLIAVAVLGFGAGLFFRYDASFIFLILTIVLALGVSFALVFRQVY-AVAPG--FSCPGVPLLPAICIFFNMFLFAQLHSEAWVRFVIV 528
[Close]
BLAST of NO04G03780 vs. NCBI_GenBank
Match: XP_009111523.1 (PREDICTED: cationic amino acid transporter 9, chloroplastic isoform X1 [Brassica rapa] >XP_013696999.1 cationic amino acid transporter 9, chloroplastic [Brassica napus] >CDY65396.1 BnaAnng20490D [Brassica napus])

HSP 1 Score: 228.4 bits (581), Expect = 5.600e-56
Identity = 173/560 (30.89%), Postives = 254/560 (45.36%), Query Frame = 0 
Query:    7 SASFWSHLLGRAFHKKCDAEEPGLRPPSPTESFKSSSGKDGHHVFHHLKRQLGFWQLTMLGVGGSIGAGVFSLTGVAAASAGPAVVFSFIFSGIIAAIDALCYSEMASRYPQ-AGTVFLYNHITFGELPALL------------------------------------------------------------------------GHRD---------------------GGRTKCDFDEYQ----------------VFFSYVGFDTIASSSEECKDPLRDLPRAILVSLGVCVGIYCVVCLILTGMVPYDMIDLAAPLSSAFAGLGLAWVPAVISLGGVVGLATTLLIGLFAQARIWLGIARDGLLPGFLAEIHPRFKTPFRAQMLCGVLPMCLSAFFNVKLLAELLDVGVILAYGTVCAAVLVQR---STTRVNTTRW--------LVLLLPACALPFALHKYNVHTGIWAMDTILLLLPIAALVPLVRPGDYP---APAHGVCFACPAVPYLPLAGVVLNVYLGVNLNSAAWLRLAVLWAGLLVHYVWTEHQYFHGN 443
            SA+++S L   A   K       L PPS   + +S+SG         L R+LG + L +LG+G SIGAGVF +TG  A  AGP V  SF+ +G    ++ALCY+E+ASR+P   G  ++Y++  F E+ A L                                                                        G R+                      G    D   +                 VFFSYVGFD +A+S+EE  +P RDLP  I+ SL VC+ +Y  VCL+LTGMVP+ ++   APL+ AF+  G+ +V  +IS+G V GL TTLL+GL+ Q+R++LG+ RDGLLP F + IHP   TP  +Q+ CG++   L+  FNV  L+ +L VG +  Y  V A V+  R   +  R ++ RW        + L++ AC+   A   Y      ++   I LLL +   V       Y    A + G  F CP VP +P   +  N++L   L+  AW+R  V+   +L   V+  +  +H +
Sbjct:   14 SATWFSQLCASARRFK------SLAPPSLETAVRSTSGDS-------LVRRLGLFDLILLGIGASIGAGVFVVTGTVARDAGPGVTISFLLAGASCVLNALCYAELASRFPAVVGGAYMYSYSAFNEITAFLVFVQLMLDYHIGAASISRSLASYAVALLELFPAFKGCIPLWIGSGQELFGGFLSFNILAPILLALLTLVLCQGVRESSAVNSVMTATKVVIVLVVICAGAFDIDVANWSPFAPNGFKAVLTGATVVFFSYVGFDAVANSAEESNNPQRDLPIGIMGSLLVCISLYIGVCLVLTGMVPFSLLSEDAPLAEAFSSKGMKFVSILISIGAVAGLTTTLLVGLYVQSRLYLGLGRDGLLPSFFSRIHPTLHTPLHSQIWCGIVAAVLAGIFNVHSLSHILSVGTLTGYSVVAACVVALRLNDNKERESSNRWTSSWHEGVICLVIIACSGFGAGVFYR-----FSASVIFLLLSVGVAVSASAVLHYRRAYAQSLGSGFCCPGVPIVPCVCIFFNIFLFAQLHYEAWIRFVVV--SVLATAVYALYGQYHAD 553
[Close]
BLAST of NO04G03780 vs. NCBI_GenBank
Match: XP_021834652.1 (cationic amino acid transporter 9, chloroplastic [Prunus avium])

HSP 1 Score: 227.6 bits (579), Expect = 9.600e-56
Identity = 165/534 (30.90%), Postives = 245/534 (45.88%), Query Frame = 0 
Query:   11 WSHLLGRAFHKKCDAEEPGLRPPSPTESFKSSSGKDGHHVFHHLKRQLGFWQLTMLGVGGSIGAGVFSLTGVAAASAGPAVVFSFIFSGIIAAIDALCYSEMASRYPQ-AGTVFLYNHITFGELPALL------------------------------------------GHRD----------------------------------------------------GGRTKCDFDEYQ----------------VFFSYVGFDTIASSSEECKDPLRDLPRAILVSLGVCVGIYCVVCLILTGMVPYDMIDLAAPLSSAFAGLGLAWVPAVISLGGVVGLATTLLIGLFAQARIWLGIARDGLLPGFLAEIHPRFKTPFRAQMLCGVLPMCLSAFFNVKLLAELLDVGVILAYGTVCAAVLVQR----STTRVNTTRW----LVLLLPACALPFA--LHKYNVHTGIWAMDTILLLLPIAALVPLVRPGDYPAPAHGVCFACPAVPYLPLAGVVLNVYLGVNLNSAAWLRLAVL 424
            WSH    A   K           SP E    ++  DG      L R+LG + L +LGVG SIGAG+F +TG  A   GP V  SFI +G+   ++ALCY+E+ASR+P   G  +LY +  F EL A L                                          GH                                                       G  + D   +                 VFF+YVGFD +A+S+EE K P RDLP  I+ SL +C+ +Y  VCL++TGM+PY ++   APL++AF   GL +V  +IS+G V GL TTLL+GL+ Q+R++LG+ RDGLLP   A +HPR  TP  +Q+  G++   L+  FNV +L+ +L VG +  Y  V A V+V R    ++++V+++ W    + LL+ AC    A   ++++V      +  ++ +L + AL       D P       F+CP VP +P A +  N++L   ++  AW+R  +L
Sbjct:   22 WSHFWSSALRSK--------PLGSPLEVAVRTNSGDG------LVRRLGMFDLILLGVGASIGAGIFVVTGTVAHDVGPGVTISFILAGVSCVLNALCYAELASRFPAVVGGAYLYTYTAFNELTAFLVFAQLMLDYHIGAASIARSLASYVVTILELFPIFKENIPDWIGHGGQNFLGGAISINVLAPILLVLLTVILCRGVGESAAVNSFMTATKVIIVIIVIFAGAFEVDASNWTPFAPNGFKPILTGATVVFFAYVGFDAVANSAEESKRPQRDLPIGIIGSLLICIALYIGVCLVITGMLPYYLLGEDAPLANAFTSKGLKFVSILISVGAVAGLTTTLLVGLYVQSRLYLGLGRDGLLPSVFARVHPRRHTPVHSQVWVGIVASALAGLFNVHILSHILSVGSLTGYSVVAACVVVLRLKDKASSQVSSSTWREGVICLLIVACGGFGAGLCYRFSVSIVFLVVAVVVAILAMGALCFRQVYADLPG------FSCPGVPIVPAACIFFNMFLFAQIHHEAWVRFVIL 535
[Close]
BLAST of NO04G03780 vs. NCBI_GenBank
Match: XP_016716654.1 (PREDICTED: cationic amino acid transporter 9, chloroplastic-like [Gossypium hirsutum])

HSP 1 Score: 227.3 bits (578), Expect = 1.300e-55
Identity = 168/518 (32.43%), Postives = 236/518 (45.56%), Query Frame = 0 
Query:   30 LRPPSPTESFKSSSGKDGHHVFHHLKRQLGFWQLTMLGVGGSIGAGVFSLTGVAAASAGPAVVFSFIFSGIIAAIDALCYSEMASRYPQ-AGTVFLYNHITFGELPALL------------------------------------------GHRDG----------------------------------------------------GRTKCDFDEYQ----------------VFFSYVGFDTIASSSEECKDPLRDLPRAILVSLGVCVGIYCVVCLILTGMVPYDMIDLAAPLSSAFAGLGLAWVPAVISLGGVVGLATTLLIGLFAQARIWLGIARDGLLPGFLAEIHPRFKTPFRAQMLCGVLPMCLSAFFNVKLLAELLDVGVILAYGTVCAAVLVQR----STTRVNT---TRW----LVLLLPACA--LPFALHKYNVHTGIWAMDTILLLLPIAALVPLVRPGDYPAPAHGVCFACPAVPYLPLAGVVLNVYLGVNLNSAAWLRLAVL 424
            LR  +   S  +++  DG      L R+LG + L +LGVG SIGAG+F +TG  A  AGP V  SFI +G    ++ALCY+E+ASR+P   G  +LY +  F E+ A L                                          GH                                                       G  K D D +                 VFF+YVGFD +A+S+EE K P RDLP  IL SL VCV +Y  VCL+LTGMVPY+++   APLS AF   GL +V  +IS+G V GL TTLL+GL+ Q+R++LG+ RDGLLP   A++HP   TP  +Q+  G++   L   FNV +L+ +L VG +  Y  V A V+  R    +  RV++   + W    L + L AC       L+++  H     +  ++ ++  AAL       D P       F+CP VP +P   +  N+YL   L+  AW+R  +L
Sbjct:   28 LRAKTLKSSSSTNNSSDG------LIRRLGVFDLILLGVGASIGAGIFVVTGTVARDAGPGVTISFILAGASCVLNALCYAELASRFPAVVGGAYLYAYTAFNEITAFLVFMQLMLDYHIGAASIARSLASYVATIFELIPALKGNIPPWVGHGGQEFFGGTLSINILAPILLAVLTVILCLGVGESSAVNSFMTAAKVVIVIFVIIVGSFKVDVDNWSPFAPNGVKHIFTGATVVFFAYVGFDAVANSAEESKRPQRDLPIGILGSLLVCVILYVGVCLVLTGMVPYNLLGEDAPLSEAFTSKGLKYVSILISIGAVAGLTTTLLVGLYVQSRLYLGLGRDGLLPSIFAKVHPIRHTPIHSQIWVGIIAAVLGGLFNVHILSHILSVGSLTGYSVVAACVVTLRWKNNTGNRVSSKCISTWCEGVLCIFLVACCGFAAGVLYRFGTHFIFMIVAVVIAIMACAALCFRQAYSDPPG------FSCPWVPIVPSVCIFFNIYLFAQLHYEAWIRFIIL 533
[Close]
BLAST of NO04G03780 vs. NCBI_GenBank
Match: AVQ09325.1 (cationic amino acid transporter 9 [Camellia sinensis])

HSP 1 Score: 227.3 bits (578), Expect = 1.300e-55
Identity = 168/542 (31.00%), Postives = 243/542 (44.83%), Query Frame = 0 
Query:    4 SSKSASFWSHLLGRAFHKKCDAEEPGLRPPSPTESFKSSSGKDGHHVFHHLKRQLGFWQLTMLGVGGSIGAGVFSLTGVAAASAGPAVVFSFIFSGIIAAIDALCYSEMASRYPQ-AGTVFLYNHITFGEL------------------------------------------PALLGHRDG---------------------------------------------------GRTKCDFDEYQ----------------VFFSYVGFDTIASSSEECKDPLRDLPRAILVSLGVCVGIYCVVCLILTGMVPYDMIDLAAPLSSAFAGLGLAWVPAVISLGGVVGLATTLLIGLFAQARIWLGIARDGLLPGFLAEIHPRFKTPFRAQMLCGVLPMCLSAFFNVKLLAELLDVGVILAYGTVCAAVLVQRSTTRVN--TTRWL---------VLLLPACALPF-ALHKYNVHTGIWAMDTILLLLPIAALVPLVRPGDYPAPAHGVCFACPAVPYLPLAGVVLNVYLGVNLNSAAWLRLAVL 424
            SS S S +SH    A   K       + PP    S ++ SG DG      L R+LG + L +LG+G SIGAG+F +TG  A  AGP V  SF+ +G    ++ALCY+E+ASR+P   G  +LY +  F EL                                          P+ +GH                                                      G  K D   +                 VFF+YVGFD +A+S+EE K P RDLP  I+ SL +C  +Y  VCL+LTGMV Y  +   APL+ AF   GL +V  +IS+G V GL TTLL+GL+ Q+R++LG+ RDGLLP   A++HP   TP  +Q+  G++   L+  FNV +L+ +L VG +  Y  V A V+  R   + N  + RW+         ++++  C     A++++N       +  ++ +   AAL    R G    P     F+CP VP +P   +  N++L   L+  AW+R  VL
Sbjct:   16 SSSSLSCFSHFWSSALRSK-------ILPPHTETSVRAISG-DG------LVRRLGLFDLILLGIGASIGAGIFVVTGTVAHDAGPGVTISFMLAGASCVLNALCYAELASRFPAVVGGAYLYTYTAFNELTAFLVFAQLMLDYHIGAASIARSLASYVVAVLELFPFFKDNIPSWIGHGGEDFLGALSINALAPILLALLTLVLCLGVGESSVLNSVMTSTKVLIVIFVIIVGAFKIDVSNWTPFAPNGFKAILTGATVVFFAYVGFDAVANSAEESKRPQRDLPLGIMGSLLICAALYIGVCLVLTGMVSYQFLGEEAPLAEAFTSKGLKYVSVLISIGAVAGLTTTLLVGLYVQSRLYLGLGRDGLLPSIFAKVHPTRHTPIHSQIWVGIVACVLAGLFNVHVLSHILSVGSLTGYSVVSACVVTLRWKDKTNQVSRRWMSNWREGVLCLVIIGCCGFAAGAIYRFNASFIFLIVAVVIAIFAAAAL--YCRQGYTDPPG----FSCPWVPIVPAVCIFFNIFLFAQLHHEAWVRFIVL 537
[Close]
BLAST of NO04G03780 vs. NCBI_GenBank
Match: XP_007052288.1 (PREDICTED: cationic amino acid transporter 9, chloroplastic [Theobroma cacao] >EOX96445.1 Cationic amino acid transporter [Theobroma cacao])

HSP 1 Score: 226.9 bits (577), Expect = 1.600e-55
Identity = 167/545 (30.64%), Postives = 244/545 (44.77%), Query Frame = 0 
Query:    4 SSKSASFWSHLLGRAFHKKCDAEEPGLRPPSPTESF-KSSSGKDGHHVFHHLKRQLGFWQLTMLGVGGSIGAGVFSLTGVAAASAGPAVVFSFIFSGIIAAIDALCYSEMASRYPQ-AGTVFLYNHITF------------------------------------------GELPALLGHRD----------------------------------------------------GGRTKCDFDEYQ----------------VFFSYVGFDTIASSSEECKDPLRDLPRAILVSLGVCVGIYCVVCLILTGMVPYDMIDLAAPLSSAFAGLGLAWVPAVISLGGVVGLATTLLIGLFAQARIWLGIARDGLLPGFLAEIHPRFKTPFRAQMLCGVLPMCLSAFFNVKLLAELLDVGVILAYGTVCAAVLVQRSTTRVNT-------TRW---LVLLLPACALPFA---LHKYNVHTGIWAMDTILLLLPIAALVPLVRPGDYPAPAHGVCFACPAVPYLPLAGVVLNVYLGVNLNSAAWLRLAVL 424
            ++ S+S +SH    A           LR  +   SF +++SG DG      L R+LG   L +LGVG SIGAG+F +TG  A  AGP V  SFI +G    ++ALCY+E+ASR+P   G  +LY +  F                                          G +PA +GH                                                       G  + D D +                 VFF+YVGFD +A+S+EE K P RDLP  IL SL +CV +Y  VCL++TGMVPY+++   APL+ AF   GL +V  +IS+  V GL TTLL+GL+ Q+R++LG+ RDGLLP   A++HP+  TP  +Q+  G++   L   FNV +L+ +L VG +  Y  V A V+  R   +          + W   ++ ++      FA   L++Y        +  ++ +L  AAL       D P       F+CP VP +P   +  N++L   L+  AW+R  +L
Sbjct:    8 ATSSSSCFSHFCSSA-----------LRAKTLNPSFGRATSGGDG------LIRRLGILDLLLLGVGASIGAGIFVVTGTVARDAGPGVTISFILAGASCVLNALCYAELASRFPAVVGGAYLYAYTAFNEITAFLVFMQLMLDYHIGAASIARSLASYVATFFELIPALKGNIPAWIGHGGEEFFGGTLSINILAPILLALLTIVLCRGVGESSAVNSFMTATKIVIVIFVIIAGAFEVDVDNWSPFAPNGFKEILTGATVVFFAYVGFDAVANSAEESKRPQRDLPIGILGSLLICVALYIGVCLVITGMVPYNLLGEDAPLAEAFTSKGLKYVSILISIAAVAGLTTTLLVGLYVQSRLYLGLGRDGLLPSLFAKVHPKRHTPIHSQIWVGIIAAVLGGLFNVHILSHILSVGSLTGYSVVAACVVTLRWKNKTGNQASSKCMSTWCEGVICIVTVACCGFATGVLYRYGASFIFMIVAVVIAILACAALCYRQAYSDPPG------FSCPVVPIVPSVCIFFNIFLFAQLHYEAWIRFVIL 529
[Close]
BLAST of NO04G03780 vs. NCBI_GenBank
Match: XP_013611179.1 (PREDICTED: cationic amino acid transporter 9, chloroplastic [Brassica oleracea var. oleracea])

HSP 1 Score: 226.9 bits (577), Expect = 1.600e-55
Identity = 173/560 (30.89%), Postives = 253/560 (45.18%), Query Frame = 0 
Query:    7 SASFWSHLLGRAFHKKCDAEEPGLRPPSPTESFKSSSGKDGHHVFHHLKRQLGFWQLTMLGVGGSIGAGVFSLTGVAAASAGPAVVFSFIFSGIIAAIDALCYSEMASRYPQ-AGTVFLYNHITFGELPALL------------------------------------------------------------------------GHRD---------------------GGRTKCDFDEYQ----------------VFFSYVGFDTIASSSEECKDPLRDLPRAILVSLGVCVGIYCVVCLILTGMVPYDMIDLAAPLSSAFAGLGLAWVPAVISLGGVVGLATTLLIGLFAQARIWLGIARDGLLPGFLAEIHPRFKTPFRAQMLCGVLPMCLSAFFNVKLLAELLDVGVILAYGTVCAAVLVQR---STTRVNTTRW--------LVLLLPACALPFALHKYNVHTGIWAMDTILLLLPIAALVPLVRPGDYP---APAHGVCFACPAVPYLPLAGVVLNVYLGVNLNSAAWLRLAVLWAGLLVHYVWTEHQYFHGN 443
            SA+++S L   A   K       L PPS   + +S+SG         L R+LG   L +LG+G SIGAGVF +TG  A  AGP V  SF+ +G    ++ALCY+E+ASR+P   G  ++Y++  F E+ A L                                                                        G R+                      G    D   +                 VFFSYVGFD +A+S+EE  +P RDLP  I+ SL VC+ +Y  VCL+LTGMVP++++   APL+ AF+  G+ +V  +IS+G V GL TTLL+GL+ Q+R++LG+ RDGLLP F + IHP   TP  +Q+ CG++   L+  FNV  L+ +L VG +  Y  V A V+  R      R ++ RW        + L++ AC+   A   Y      ++   I LLL +   V       Y    A + G  F CP VP +P   +  N++L   L+  AW+R  V+   +L   V+  +  +H +
Sbjct:   14 SATWFSQLCTSARRFK------SLAPPSLETAVRSTSGDS-------LVRRLGLCDLILLGIGASIGAGVFVVTGTVARDAGPGVTISFLLAGASCVLNALCYAELASRFPAVVGGAYMYSYSAFNEITAFLVFVQLMLDYHIGAASISRSLASYAVALLELFPAFKGCIPLWIGSGQELFGGFLSFNILAPILLALLTLVLCQGVRESSAVNSVMTATKVVIVLVVICAGAFDIDVANWSPFAPNGFKAVLTGATVVFFSYVGFDAVANSAEESNNPQRDLPIGIMGSLLVCISLYIGVCLVLTGMVPFNLLSEDAPLAEAFSSKGMKFVSVLISIGAVAGLTTTLLVGLYVQSRLYLGLGRDGLLPSFFSRIHPTLHTPLHSQIWCGIVAAVLAGIFNVHSLSHILSVGTLTGYSVVAACVVALRLNDKKERESSNRWTSSWHEGVICLVIIACSGFGAGVFYR-----FSASVIFLLLSVGVAVSASAVLHYRRAYAQSLGSGFCCPGVPIVPCVCIFFNIFLFAQLHYEAWIRFVVV--SVLATAVYALYGQYHAD 553
[Close]
BLAST of NO04G03780 vs. NCBI_GenBank
Match: ONI22418.1 (hypothetical protein PRUPE_2G127800 [Prunus persica] >ONI22419.1 hypothetical protein PRUPE_2G127800 [Prunus persica])

HSP 1 Score: 226.5 bits (576), Expect = 2.100e-55
Identity = 164/534 (30.71%), Postives = 244/534 (45.69%), Query Frame = 0 
Query:   11 WSHLLGRAFHKKCDAEEPGLRPPSPTESFKSSSGKDGHHVFHHLKRQLGFWQLTMLGVGGSIGAGVFSLTGVAAASAGPAVVFSFIFSGIIAAIDALCYSEMASRYPQ-AGTVFLYNHITFGELPALL------------------------------------------GHRD----------------------------------------------------GGRTKCDFDEYQ----------------VFFSYVGFDTIASSSEECKDPLRDLPRAILVSLGVCVGIYCVVCLILTGMVPYDMIDLAAPLSSAFAGLGLAWVPAVISLGGVVGLATTLLIGLFAQARIWLGIARDGLLPGFLAEIHPRFKTPFRAQMLCGVLPMCLSAFFNVKLLAELLDVGVILAYGTVCAAV----LVQRSTTRVNTTRW----LVLLLPACALPFA--LHKYNVHTGIWAMDTILLLLPIAALVPLVRPGDYPAPAHGVCFACPAVPYLPLAGVVLNVYLGVNLNSAAWLRLAVL 424
            WSH    A   K           SP E    ++  DG      L R+LG + L +LGVG SIGAG+F +TG  A  AGP V  SFI +G+   ++ALCY+E+A R+P   G  +LY +  F EL A L                                          GH                                                       G  + D   +                 VFF+YVGFD +A+S+EE K P RDLP  I+ SL +C+ +Y  VCL++TGM+PY ++   APL++AF   GL +V  +IS+G V GL TTLL+GL+ Q+R++LG+ RDGLLP   A +HPR  TP  +Q+  G++   L+  FNV +L+ +L VG +  Y  V A V    L  +++++V+++ W    + LL+ AC    A   ++++V      +  ++ +L + AL       D P       F+CP VP +P A +  N++L   ++  AW+R  +L
Sbjct:   22 WSHFWSSALRTK--------PLGSPLEVAVRTNSGDG------LVRRLGMFDLILLGVGASIGAGIFVVTGTVAHDAGPGVTISFILAGVSCVLNALCYAELACRFPAVVGGAYLYTYTAFNELTAFLVFAQLMLDYHIGAASIARSLASYVVTILELFPIFKENIPDWIGHGGQKFLGGAISINVLAPVLLVLLTVILCRGVGESAAVNSFMTATKVIIVIIVIFAGAFEVDTSNWTPFAPDGFKPILTGATVVFFAYVGFDAVANSAEESKRPQRDLPIGIIGSLLICIALYIGVCLVITGMLPYYLLGEDAPLANAFTSKGLKFVSILISVGAVAGLTTTLLVGLYVQSRLYLGLGRDGLLPSVFARVHPRCHTPIHSQVWVGIVAAALAGLFNVHILSHILSVGSLTGYSVVAACVVALRLKDKASSQVSSSTWREGVICLLIVACGGFSAGLCYRFSVSIVFLVVAVVVAILAMGALCFRQVYADLPG------FSCPGVPIVPAACIFFNMFLFAQIHHEAWVRFVIL 535
The following BLAST results are available for this feature:
BLAST of NO04G03780 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
OMO69588.11.500e-5631.08Amino acid/polyamine transporter I [Corchorus caps... [more]
XP_013728010.14.300e-5631.07cationic amino acid transporter 9, chloroplastic [... [more]
XP_019461736.14.300e-5631.72PREDICTED: cationic amino acid transporter 9, chlo... [more]
XP_009111523.15.600e-5630.89PREDICTED: cationic amino acid transporter 9, chlo... [more]
XP_021834652.19.600e-5630.90cationic amino acid transporter 9, chloroplastic [... [more]
XP_016716654.11.300e-5532.43PREDICTED: cationic amino acid transporter 9, chlo... [more]
AVQ09325.11.300e-5531.00cationic amino acid transporter 9 [Camellia sinens... [more]
XP_007052288.11.600e-5530.64PREDICTED: cationic amino acid transporter 9, chlo... [more]
XP_013611179.11.600e-5530.89PREDICTED: cationic amino acid transporter 9, chlo... [more]
ONI22418.12.100e-5530.71hypothetical protein PRUPE_2G127800 [Prunus persic... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL080nonsL080Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR058ncniR058Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR110ngnoR110Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009419NSK009419Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G03780.1NO04G03780.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|295463gene_2161Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100002g111gene1823Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G03780.1NO04G03780.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G03780 ID=NO04G03780|Name=NO04G03780|organism=Nannochloropsis oceanica|type=gene|length=3301bp
ATGGTACCCTCCAGCAAGTCGGCATCTTTTTGGAGCCATTTATTAGGCCG
GGCCTTCCACAAGAAGTGCGACGCTGAAGAGCCAGgtgactgtttgcttg
tttgtggtgaagagtggtctcttgccccacactattctccccgcgtgtga
aagctctgtatgcggcacacaagccaaccgccaccgaattgtactagtgc
gtgtcaaaataaaagtcgactctccttgtcctttccagcgcagtgccacc
tgcttctttgctccagtacaatgatgcccccagccccatccgaggccccc
agcaatctcacgccacctcttccccccctctattccccccgacaaaacag
GCCTACGGCCCCCGTCGCCCACAGAGTCTTTCAAGTCAAGCAGCGGCAAA
GATGGCCACCATGTATTTCACCACCTAAAGCGCCAACTCGGTTTCTGGCA
GTTGACGATGCTGGGCGTCGGTGGCTCAATTGGCGCTGGCGTTTTCTCCC
TGACCGGGGTCGCTGCCGCAAGCGCGGGCCCGGCAGTCGTGTTTAGCTTC
ATCTTCAGCGGTATCATAGCGGCCATCGACGCGTTGTGCTATTCGGAGAT
GGCTTCACGGTACCCTCAAGCGGGAACTGTCTTTTTGTACAATCATATCA
CGTTTGGAGAGCTCCCTGCCCTGCTTgtgagtataaatttgttggtggat
tacactgtggctgctgctttgattgcccgctcttttgccttgtatcttgt
tgaatttctcaagcatgctggcttagggccccttccttcatggttggctt
cttggccacttacggatatcataagtctaagtcttgttgcccccctcctt
ctacttctcctcactctcgtcctgtgtagGGGCACCGAGACGGGGGCCGT
ACTAAATGTGATTTTGACGAGTATCAAGgtcggtgtcattttgattgtgt
gcgctgtagggctcttccatgtacacccgcccaattgggtgcctttcttc
ccgcatgggatcgagagtgtgtttcgaacctcttccacagTTTTTTTTTC
TTATGTAGGCTTCGACACCATAGCTTCTTCCTCTGAAGAATGCAAGGATC
CTTTGCGGGATTTGCCACGTGCAATCCTAGTGAGTCTGGGCGTGTGCGTG
GGTATCTATTGTGTTGTTTGTTTAATTTTGACTGGCATGGTGCCTTACGA
TATGATTGATCTGGCTGCACCGCTTTCGTCGGCTTTTGCGGGGTTGGGAT
TAGCGTGGGTTCCGGCTGTGATTAGTCTGGGGGGGGTTGTTGGGCTTGCG
ACTACGCTTTTGATTGGTTTGTTTGCACAGGCAAGGATCTGGTTGGGGAT
AGCCCGGGATGGTCTTTTGCCAGGCTTCCTGGCGGAGATTCACCCACGAT
TTAAAACGCCGTTTAGAGCGCAGATGTTGTGTGGTGTATTACCTATGTGT
TTGTCTGCCTTTTTCAACGTGAAATTACTGGCGGAGTTGCTGGATGTGGG
AGTTATTTTGGCGTATGGCACAGTTTGTGCGGCTGTCTTAGTGCAGCGGT
CGACGACAAGAGTAAATACGACCAGATGGCTTGTGTTGCTGCTGCCGGCG
TGTGCTTTGCCGTTTGCATTGCATAAATACAACGTACACACGGGAATTTG
GGCCATGGACACAATCCTTTTATTGCTCCCGATTGCTGCGTTGGTGCCTT
TGGTACGACCGGGAGATTACCCGGCGCCTGCGCATGGTGTGTGTTTTGCT
TGCCCGGCTGTGCCTTATCTACCGCTGGCGGGAGTGGTTCTCAACGTATA
TTTAGGGGTAAATTTGAATAGTGCCGCGTGGTTGCGTTTGGCAGTGCTGT
GGGCGGGCTTGTTGGTGCATTATGTTTGGACGGAACACCAGTATTTTCAT
GGAAATGGGGAGAAGCGTGGAAGGCAGTTTGGAGAGAGAAGTGGCAGCAG
ACGTTATGAAGGAACAGAGAACGGTGTGgtaccttaccctccgttcgaat
cgttgcggcgccgtcgtggggtcggggggggagggtcaggacaatctcag
tttggtggtggagggggggaggaggaggagggggggagaattcatctcgg
acgcccttgttggacggggacgacgccgtgtagacttacgtgtacagaca
agcacacataaaatacgatctgttcaaaaataatgcaaaagaaatgatca
aattcaaatgacgagggagaggtgatcatagaacgaccttcttcttttgt
tcgttttcaaatcgggaaagcattgccaataagcgaggcaagagcgaggg
tggacccgcaagaagtgcatccaacacccgagcaaagacaagaaccattg
caaaaccagcgccctggaggcttacagcgaccattggtccccatcccatc
cctctatattacctattttgaacgagagggctgttggaagaagttggacg
ataggcgaagtctttggctaactcgcaaacataaattcaggacaagcctt
cttaccctcacttctttcattcactcatggctggctgcactgtcaaaacc
cacactacatacgcagCACTCTACCATGTCCGTCGTGGCCAAGATCTGGG
ACAGCCTGCGAACGTCCTACACCAGGATGGTGGTGGGAGAGCTCAACAAC
TACGgtacgtcttgcttaagcctgctagacgtgggctccccccatttcta
ccggcttgttgtcgtcaagtcctgttgttctctctttctatcccttctcc
tgctgcgagatgtacgtgcacgtgtcaatggtcttgtcgtgtctgctgag
ggcaggcccttattcgagctaaactctgcctcccatcccatcatcgtgct
tggaggctgccagtatttgccatcctctacgccttgacaatgtgcgccct
atgcttgtggccacgtcaagcttttcttctcttgtagtgcaagctttttt
tatggttatctgttttgatttttccttcctccctcacatcttttcaccga
attcctctccgacgaactcacccacctacctcatatcccctccttcccct
tcccctcagGCCTGCGTTACCAAGATCTCTTCATAGAAGATCCCGCGGTG
ATCAAGGCAGTCCACCACCTTTCTCCCGAAGAACAAGTCTCCCGTGAACG
CCGAATTAAGCGCGCCATCGAGATTTCCCTTAAAAAGAAGTACTTACCCA
CGGACCTGCAAAAGATGCAAACGCCCCTCAAGCCTTACCTCAGCCACGCC
CTGGAGGAGGTAGAGGCGGAGGAGACGGAGCGCAAGTTGCTAAATCCCTA
G
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protein sequence of NO04G03780.1

>NO04G03780.1-protein ID=NO04G03780.1-protein|Name=NO04G03780.1|organism=Nannochloropsis oceanica|type=polypeptide|length=576bp
MVPSSKSASFWSHLLGRAFHKKCDAEEPGLRPPSPTESFKSSSGKDGHHV
FHHLKRQLGFWQLTMLGVGGSIGAGVFSLTGVAAASAGPAVVFSFIFSGI
IAAIDALCYSEMASRYPQAGTVFLYNHITFGELPALLGHRDGGRTKCDFD
EYQVFFSYVGFDTIASSSEECKDPLRDLPRAILVSLGVCVGIYCVVCLIL
TGMVPYDMIDLAAPLSSAFAGLGLAWVPAVISLGGVVGLATTLLIGLFAQ
ARIWLGIARDGLLPGFLAEIHPRFKTPFRAQMLCGVLPMCLSAFFNVKLL
AELLDVGVILAYGTVCAAVLVQRSTTRVNTTRWLVLLLPACALPFALHKY
NVHTGIWAMDTILLLLPIAALVPLVRPGDYPAPAHGVCFACPAVPYLPLA
GVVLNVYLGVNLNSAAWLRLAVLWAGLLVHYVWTEHQYFHGNGEKRGRQF
GERSGSRRYEGTENGVHSTMSVVAKIWDSLRTSYTRMVVGELNNYGLRYQ
DLFIEDPAVIKAVHHLSPEEQVSRERRIKRAIEISLKKKYLPTDLQKMQT
PLKPYLSHALEEVEAEETERKLLNP*
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Synonyms
Publications