NO04G03460, NO04G03460 (gene) Nannochloropsis oceanica

Overview
NameNO04G03460
Unique NameNO04G03460
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length435
Alignment locationchr4:946823..947257 -

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Properties
Property NameValue
DescriptionProtein kinase c1 inhibitor
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:946823..947257 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016301kinase activity
Vocabulary: INTERPRO
TermDefinition
IPR036265HIT-like_sf
IPR011146HIT-like
IPR001310Histidine_triad_HIT
Homology
BLAST of NO04G03460 vs. NCBI_GenBank
Match: EWM28795.1 (protein kinase c1 inhibitor [Nannochloropsis gaditana])

HSP 1 Score: 199.9 bits (507), Expect = 5.400e-48
Identity = 92/140 (65.71%), Postives = 114/140 (81.43%), Query Frame = 0
Query:    1 MTDPSCVFCNIIAGNAPAHKVYEDEHNVAFLDIHPLADFHTLLIPKHHVARMEDIDDASAAALGIAVKRLSRIVHRLTGNRDFNILLANGQQAGQEVRHSHYHFIPREGRQDGLGYRWKTGRLPSQERIKDFCRKALSFF 141
            M + +CVFC+I A NAPAH+VYED+  +AFLD +PLADFHTLLIPK HV   ED DDA+AAA+G+++KRLS I+  L G  DFNILL+NG++AGQEV HSH+H IPREGRQDGLGYRWK G+LP+Q  I DFC KA++ +
Sbjct:  117 MGEGNCVFCSIAARNAPAHRVYEDDMTLAFLDTNPLADFHTLLIPKRHVTSFEDCDDAAAAAMGVSLKRLSCIMRELRG--DFNILLSNGKKAGQEVWHSHFHLIPREGRQDGLGYRWKAGQLPAQVEITDFCDKAMALY 254          
BLAST of NO04G03460 vs. NCBI_GenBank
Match: WP_012829589.1 (HIT family protein [Haliangium ochraceum] >ACY16991.1 histidine triad (HIT) protein [Haliangium ochraceum DSM 14365])

HSP 1 Score: 126.7 bits (317), Expect = 5.800e-26
Identity = 59/124 (47.58%), Postives = 81/124 (65.32%), Query Frame = 0
Query:    4 PSCVFCNIIAGNAPAHKVYEDEHNVAFLDIHPLADFHTLLIPKHHVARMEDIDDASAAALGIAVKRLSRIVHRLTGNRDFNILLANGQQAGQEVRHSHYHFIPREGRQDGLGYRWKTGRLPSQE 128
            P  +F  I+ G  P HKVYEDEH +AFLDI+PL+  HTL+IPK   A + ++ D SAAA+G  + R++R V   TG  D+NIL  NG+ A Q + H H+H IP+ G  DGLG  W+ G + ++E
Sbjct:    2 PETIFSKILTGELPCHKVYEDEHVLAFLDIYPLSRGHTLVIPKEEKAMLHELSDESAAAIGRVLPRIARAVMAATGTTDYNILQNNGELAHQAIFHVHFHVIPKTG-TDGLGVGWRPGNIDAEE 124          
BLAST of NO04G03460 vs. NCBI_GenBank
Match: OQX67650.1 (diadenosine tetraphosphate hydrolase [Sorangiineae bacterium NIC37A_2])

HSP 1 Score: 125.6 bits (314), Expect = 1.300e-25
Identity = 61/131 (46.56%), Postives = 84/131 (64.12%), Query Frame = 0
Query:    7 VFCNIIAGNAPAHKVYEDEHNVAFLDIHPLADFHTLLIPKHHVARMEDIDDASAAALGIAVKRLSRIVHRLTGNRDFNILLANGQQAGQEVRHSHYHFIPREGRQDGLGYRWKTGRLPSQERIKDFCRKAL 138
            +F  II G  P+HKVYED+H +AFLDI PL+  HTL+IPK  V  + ++ D SAAA+G  + RL R V ++TG  D+NIL  NG  A Q V H H+H IP+   ++GLG  WK G+L +   +    ++AL
Sbjct:    5 IFSKIIRGEIPSHKVYEDDHVLAFLDIGPLSRGHTLVIPKQAVKTVGELSDESAAAIGRVLPRLCRAVQKVTGCEDYNILQNNGAPAHQAVFHVHFHIIPKPNAEEGLGIVWKPGKLENGAELAREIQEAL 135          
BLAST of NO04G03460 vs. NCBI_GenBank
Match: KIG14879.1 (Histidine triad (HIT) nucleotide-binding protein [Enhygromyxa salina])

HSP 1 Score: 119.4 bits (298), Expect = 9.300e-24
Identity = 62/127 (48.82%), Postives = 82/127 (64.57%), Query Frame = 0
Query:    1 MTDPSCVFCNIIAGNAPAHKVYEDEHNVAFLDIHPLADFHTLLIPKHHVARMEDIDDASAAALGIAVKRLSRIVHRLTGNRDFNILLANGQQAGQEVRHSHYHFIPREGRQDGLGYRWKTGRLPSQE 128
            M+D + VF  I+ G  P H+VYEDE  +AFLDI PLA  HTL+IPK   A + ++DD SAAA+G A+ R++R V   +G  ++NIL  NG+ A Q V H H+H IP+   Q GLG  W+ G L S E
Sbjct:    1 MSDMATVFDKILDGEIPCHRVYEDERVLAFLDISPLAPGHTLVIPKQRKAFLHELDDESAAAIGRALPRVARAVMAASGASEYNILQNNGRGAHQAVFHVHFHVIPKIEHQ-GLGINWRPGALDSGE 126          
BLAST of NO04G03460 vs. NCBI_GenBank
Match: WP_053234422.1 (HIT family protein [Sandaracinus amylolyticus] >AKF07128.1 Bis(5'-nucleosyl)-tetraphosphatase [Sandaracinus amylolyticus])

HSP 1 Score: 119.0 bits (297), Expect = 1.200e-23
Identity = 59/123 (47.97%), Postives = 79/123 (64.23%), Query Frame = 0
Query:    1 MTDPSCVFCNIIAGNAPAHKVYEDEHNVAFLDIHPLADFHTLLIPKHHVARMEDIDDASAAALGIAVKRLSRIVHRLTGNRDFNILLANGQQAGQEVRHSHYHFIPREGRQDGLGYRWKTGRL 124
            MT    +F  I+ G  P H+VYEDEH +AFLDI PL++ HTL+IPK   A + ++ D SAAA+G  + RL+R V + TG   +NIL  NG +A Q V H H+H IP+ G + GLG  W+ G L
Sbjct:    1 MTQTRTIFDRILEGEIPCHRVYEDEHVLAFLDIGPLSEGHTLVIPKERKAFLHELSDESAAAIGRVLPRLARAVIQATGATAYNILQNNGAEAHQAVFHVHFHIIPKRGER-GLGVGWRPGSL 122          
BLAST of NO04G03460 vs. NCBI_GenBank
Match: WP_066286613.1 (HIT family protein [Fictibacillus arsenicus] >ANX11091.1 protein hit [Fictibacillus arsenicus])

HSP 1 Score: 116.7 bits (291), Expect = 6.000e-23
Identity = 55/125 (44.00%), Postives = 78/125 (62.40%), Query Frame = 0
Query:    3 DPSCVFCNIIAGNAPAHKVYEDEHNVAFLDIHPLADFHTLLIPKHHVARMEDIDDASAAALGIAVKRLSRIVHRLTGNRDFNILLANGQQAGQEVRHSHYHFIPREGRQDGLGYRWKTGRLPSQE 128
            D +C+FC I++G  P++KVYEDE+ +AFLDI  +   HTL+IPK H   + ++ + +AA L  AV +++  + +       N+L  NG+ AGQ V H H HFIPR G  DG G  WKT  LP+ E
Sbjct:   14 DSNCIFCKIVSGEIPSYKVYEDENVLAFLDISQVTKGHTLIIPKEHSKDVFELSEETAAKLFSAVPKIASSIKQTFNPIGLNLLNNNGEAAGQSVFHYHMHFIPRYGSGDGFGAVWKTQELPADE 138          
BLAST of NO04G03460 vs. NCBI_GenBank
Match: WP_034817775.1 (HIT family protein [Exiguobacterium alkaliphilum])

HSP 1 Score: 115.2 bits (287), Expect = 1.700e-22
Identity = 54/119 (45.38%), Postives = 74/119 (62.18%), Query Frame = 0
Query:    2 TDPSCVFCNIIAGNAPAHKVYEDEHNVAFLDIHPLADFHTLLIPKHHVARMEDIDDASAAALGIAVKRLSRIVHRLTGNRDFNILLANGQQAGQEVRHSHYHFIPREGRQDGLGYRWKT 121
            T+ +C+FC I+ G  P+HKVYEDE  VAFLDI  + + HTL+IPKHH   + ++ +A A+ +   V R++  + R TG    NIL    + AGQ V H H H IPR G  DG G +W+T
Sbjct:    3 TEDNCIFCKIVKGEIPSHKVYEDESVVAFLDISQVTNGHTLVIPKHHARNIYELPEAVASDVFKTVPRIANAIQRETGAIGMNILSNAEEIAGQTVYHFHIHLIPRFGHDDGFGAKWET 121          
BLAST of NO04G03460 vs. NCBI_GenBank
Match: GAM89323.1 (hypothetical protein ANO11243_073600 [fungal sp. No.11243])

HSP 1 Score: 115.2 bits (287), Expect = 1.700e-22
Identity = 55/129 (42.64%), Postives = 84/129 (65.12%), Query Frame = 0
Query:    5 SCVFCNIIAGNAPAHKVYEDEHNVAFLDIHPLADFHTLLIPKHHVARMEDIDDASAAALGIAVKRLSRIVHRLTGNRDFNILLANGQQAGQEVRHSHYHFIPREGRQDGLGYRWKTGRLPSQERIKDFC 134
            SC+FC II G+ P+ K++E +   AFLDI+PL+  H L+IPKHH A++ DI D S   L    K+++      +G++D+NIL  NG+ A QEV H H+HFIP+  + +GLG +W   ++ S+E ++  C
Sbjct:    3 SCIFCKIIKGDIPSMKLFESDKTFAFLDINPLSYGHALVIPKHHGAKLHDIPDESLGELLSVTKKIA----IASGSQDYNILQNNGRIAHQEVDHVHFHFIPKPNQSEGLGIQWPQQQM-SKESLQKLC 126          
BLAST of NO04G03460 vs. NCBI_GenBank
Match: WP_077363438.1 (HIT family protein [Fictibacillus arsenicus] >OOE13004.1 HIT family protein [Fictibacillus arsenicus])

HSP 1 Score: 115.2 bits (287), Expect = 1.700e-22
Identity = 55/125 (44.00%), Postives = 77/125 (61.60%), Query Frame = 0
Query:    3 DPSCVFCNIIAGNAPAHKVYEDEHNVAFLDIHPLADFHTLLIPKHHVARMEDIDDASAAALGIAVKRLSRIVHRLTGNRDFNILLANGQQAGQEVRHSHYHFIPREGRQDGLGYRWKTGRLPSQE 128
            D +C+FC I+ G  P+HKVYED++ +AFLDI  +   HTL+IPK H   + ++ + +AA L  AV +++  + +       N+L  NG+ AGQ V H H HFIPR G  DG G  WKT  LP+ E
Sbjct:   14 DSNCIFCKIVEGVIPSHKVYEDDNVLAFLDISQVTKGHTLIIPKEHSKDVFELSEETAAKLFSAVPKIASSIKQTFNPIGLNLLNNNGEAAGQSVFHYHMHFIPRYGSGDGFGAVWKTQDLPADE 138          
BLAST of NO04G03460 vs. NCBI_GenBank
Match: WP_026689068.1 (HIT family protein [Bacillus aurantiacus])

HSP 1 Score: 114.8 bits (286), Expect = 2.300e-22
Identity = 57/129 (44.19%), Postives = 78/129 (60.47%), Query Frame = 0
Query:    2 TDPSCVFCNIIAGNAPAHKVYEDEHNVAFLDIHPLADFHTLLIPKHHVARMEDIDDASAAALGIAVKRLSRIVHRLTGNRDFNILLANGQQAGQEVRHSHYHFIPREGRQDGLGYRWKT-GRLPSQERI 130
            T+P C+FC I+ G+ PA KVYED H VAF DI  +   HTL+IPKHHV  + ++D+ ++  L  AV +++  +         NIL  NG+ AGQ V H H H IPR G+ DG G  WK  G   +QE++
Sbjct:    7 TNPDCIFCKIVKGDIPASKVYEDNHVVAFFDISQVTKGHTLVIPKHHVENVYELDEETSRNLFAAVPKIANALKAEFEPIGLNILNNNGKAAGQSVFHYHLHLIPRYGKGDGFGAVWKEHGSEYTQEKL 135          
The following BLAST results are available for this feature:
BLAST of NO04G03460 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28795.15.400e-4865.71protein kinase c1 inhibitor [Nannochloropsis gadit... [more]
WP_012829589.15.800e-2647.58HIT family protein [Haliangium ochraceum] >ACY1699... [more]
OQX67650.11.300e-2546.56diadenosine tetraphosphate hydrolase [Sorangiineae... [more]
KIG14879.19.300e-2448.82Histidine triad (HIT) nucleotide-binding protein [... [more]
WP_053234422.11.200e-2347.97HIT family protein [Sandaracinus amylolyticus] >AK... [more]
WP_066286613.16.000e-2344.00HIT family protein [Fictibacillus arsenicus] >ANX1... [more]
WP_034817775.11.700e-2245.38HIT family protein [Exiguobacterium alkaliphilum][more]
GAM89323.11.700e-2242.64hypothetical protein ANO11243_073600 [fungal sp. N... [more]
WP_077363438.11.700e-2244.00HIT family protein [Fictibacillus arsenicus] >OOE1... [more]
WP_026689068.12.300e-2244.19HIT family protein [Bacillus aurantiacus][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL076nonsL076Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR058ncniR058Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR106ngnoR106Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009491NSK009491Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G03460.1NO04G03460.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|579178gene_2122Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100002g43gene1886Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G03460.1NO04G03460.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G03460 ID=NO04G03460|Name=NO04G03460|organism=Nannochloropsis oceanica|type=gene|length=435bp
ATGACAGACCCTAGTTGCGTCTTCTGTAACATCATCGCGGGCAATGCACC
GGCGCACAAAGTGTACGAGGATGAGCACAATGTGGCCTTCCTAGACATCC
ACCCCCTCGCCGATTTCCACACGCTCTTGATTCCAAAGCACCACGTCGCC
CGTATGGAAGACATCGATGATGCCAGTGCTGCTGCCTTGGGAATCGCCGT
CAAACGGCTCAGTCGGATTGTCCACCGATTGACCGGGAACAGGGACTTCA
ATATTCTTCTTGCCAACGGGCAACAGGCTGGGCAAGAAGTGAGGCACTCG
CATTACCATTTCATCCCGCGAGAAGGGCGACAAGACGGCCTAGGCTATCG
GTGGAAAACCGGGCGACTACCATCGCAAGAGAGGATCAAAGACTTTTGCA
GAAAAGCCTTGTCCTTTTTCGCTTATGCAGGATGA
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protein sequence of NO04G03460.1

>NO04G03460.1-protein ID=NO04G03460.1-protein|Name=NO04G03460.1|organism=Nannochloropsis oceanica|type=polypeptide|length=145bp
MTDPSCVFCNIIAGNAPAHKVYEDEHNVAFLDIHPLADFHTLLIPKHHVA
RMEDIDDASAAALGIAVKRLSRIVHRLTGNRDFNILLANGQQAGQEVRHS
HYHFIPREGRQDGLGYRWKTGRLPSQERIKDFCRKALSFFAYAG*
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Synonyms
Publications