NO04G03140, NO04G03140 (gene) Nannochloropsis oceanica

Overview
NameNO04G03140
Unique NameNO04G03140
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1960
Alignment locationchr4:857311..859270 +

Link to JBrowse

Properties
Property NameValue
DescriptionSphingosine kinase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:857311..859270 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
GO:0016301kinase activity
GO:0003951NAD+ kinase activity
Vocabulary: INTERPRO
TermDefinition
IPR016064NAD/diacylglycerol_kinase
IPR001206Diacylglycerol_kinase_cat_dom
Vocabulary: Biological Process
TermDefinition
GO:0016310phosphorylation
Homology
BLAST of NO04G03140 vs. NCBI_GenBank
Match: EWM28757.1 (sphingosine kinase [Nannochloropsis gaditana])

HSP 1 Score: 470.3 bits (1209), Expect = 6.900e-129
Identity = 249/462 (53.90%), Postives = 326/462 (70.56%), Query Frame = 0
Query:    6 SFIDYRTQKLVRLVMDGIEPYIDIEGSVRTLLRDVVGSSVIETLDQTQGCKLLVFAYPRRTDRNCLCGNKRLSLERQAQHLRLTAPASSVAKHWDALIKK------WCRGGHQGXXXXXXXXXXXXXXXXXVNPKSGKQQAHSIYTAVVAPMLAQADIEHEMVVTMRMQHAKDMIYALDVEAWDGVVAIGGDGLLSDVINGLFSRDPENQRALLELPVAIVNGGTGNGFFSSLLHRQNEAFNPISATFLLLKAKSTLPADLSLVETADGQRHISFLSLSFGLIADVDLESEVIRWAGALRMDLFSLYAIFRSRTYRARLSFWSCEEGESSFADAIHLPPLHTPLPMKNEWISIEDDFLTILISHVSHIAEAVHSAPGKKMGDGTFQLMVLRRQSSLSRMRLISLFMALEHGDHVPLKEVEIYHARAYRLEPLTDQGRYSLDGETIPFGHVQGKILPLALQVL 462
            +FID  ++K V+LV+ G +P I++ G ++  L DV+GS+VIET  Q++G KLLV+AYPR   R   CG      +R+ Q+L    P + +AK WD  IK+      W                        +NP +G+ Q+ ++YT+VVAPML QA + HE+VVT + Q AK +++ L+ EAWD VVAIGGDGLLS+++ GL+S+DP +   L  LP+AIV  GTGNG  +S L++Q E   PI+A FL+LKAKST+PADLSLVE +DGQR +SFL+LSFGL+ADVDLESEVIRWAG+ RMDLF+LYAI R R+YRARLS+   +EG    A A  LPPL   LP  + W+ +E DFL +LISHVSHIAE+ HS PGK+MGDGT Q++VLRRQ SLSR+RLISLF+ALE G HV   EVEIY+A AYRLE LT++G Y+LDGE +P G +QG+ILP A+++L
Sbjct:  119 AFIDLISKKRVQLVIKGGDPCIEVGGGLQVSLYDVIGSAVIET-QQSEGTKLLVYAYPRSVGRQYPCGKVYPIAKRRPQYLHFMTPKAQLAKRWDQRIKELAWRESWLSRQDGLDGTHKSKRWRQRRLLVVLNPAAGRGQSQAVYTSVVAPMLEQAGVAHELVVTRKAQEAKSLMHNLNTEAWDCVVAIGGDGLLSEIVQGLYSQDPVSCHPLTRLPLAIVPSGTGNGMAASFLYQQAEVPCPINAMFLILKAKSTVPADLSLVEASDGQR-MSFLALSFGLVADVDLESEVIRWAGSFRMDLFALYAILRLRSYRARLSYLPSKEGPPPRAAA--LPPLRARLPDASGWVHMEHDFLMVLISHVSHIAESAHSNPGKRMGDGTLQILVLRRQPSLSRLRLISLFLALERGYHVTADEVEIYNAVAYRLESLTERGVYTLDGEAVPCGSIQGRILPQAMRIL 576          
BLAST of NO04G03140 vs. NCBI_GenBank
Match: OEU09515.1 (DAGK_cat-domain-containing protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 241.9 bits (616), Expect = 4.000e-60
Identity = 124/336 (36.90%), Postives = 198/336 (58.93%), Query Frame = 0
Query:  131 VNPKSGKQQAHSIYTAVVAPMLAQADIEHEMVVTMRMQHAKDMIYA-------LDVEAWDGVVAIGGDGLLSDVINGLFSRDPENQRALLELPVAIVNGGTGNGFFSSLLHRQNEAFNPISATFLLLKAKSTLPADLSLVETADGQRHISFLSLSFGLIADVDLESEVIRWAGALRMDLFSLYAIFRSRTYRARLSFWSCEEGESSFADAIHLPPLHTPLPMKNEWISIEDDFLTILISHVSHIAEAVHSAPGKKMGDGTFQLMVLRRQSSLSRMRLISLFMALEHGDHVPLKEVEIYHARAYRLEPLTDQGRYSLDGETIPFGHVQGKILPLALQ 460
            VNP SG++   S Y  ++ PML +A + H+ ++T   +HA++ +          DV  + G+V +GGDG + +++ G+  RD +  + L  + + ++  GT NGF +SL H   E+ +P+ + F+++K  S+   DLS  +T     + SFL+ S+ +IAD+D+ESE IRWAG LRMD++ +  +   R YRA+ S+    E + +    + LPPL TPL     W+++EDDF+   +S V+H  E +  +P  KM DG FQ+ V+R   ++SR+RL  + +A+EHG HV +  VE     AYRLEP+T      LDGE I  G +Q  +LP ++Q
Sbjct:  202 VNPCSGQKMGVSEYEKMLLPMLEEAGVAHDCLITTHTKHAEERMRKQCTPSDFKDVSKYTGIVVVGGDGTIHEIMQGIHQRD-DRDKILESIKLGMIGAGTSNGFSASLAHASKESMSPLDSAFVIVKGMSSW-IDLSRYDTKSSS-YTSFLTFSWAMIADIDIESECIRWAGFLRMDIWGVVRVLFLRKYRAKFSYLPPTEDKKT----VILPPLSTPLSENEGWVTVEDDFVLFWVSQVTHAGEQMFQSPSCKMNDGVFQIFVVR--GNVSRLRLALILLAMEHGGHVGMNGVEFIQCSAYRLEPITQGSYNDLDGEVIESGPIQASVLPSSIQ 528          
BLAST of NO04G03140 vs. NCBI_GenBank
Match: WP_019504583.1 (hypothetical protein [Pleurocapsa sp. PCC 7319])

HSP 1 Score: 210.7 bits (535), Expect = 9.800e-51
Identity = 139/427 (32.55%), Postives = 222/427 (51.99%), Query Frame = 0
Query:   36 LLRDVVGSSVIETLDQTQGCKLLVFAYPRRTDRNCLCGNKRLSLERQAQHLRLTAPASSVAKHWDALIKKWCRGGHQGXXXXXXXXXXXXXXXXXVNPKSGKQQAHSIYTAVVAPMLAQADIEHEMVVTMRMQHAKDMIYALDVEAWDGVVAIGGDGLLSDVINGLFSRDPENQRALLELPVAIVNGGTGNGFFSSLLHRQNEAFNPISATFLLLKAKSTLPADLSLVETADGQRHISFLSLSFGLIADVDLESEVIRWAGALRMDLFSLYAIFRSRTYRARLSFWSCEEGESSFADAIHLPPLHTPLPMKNEWISIEDDFLTILISHVSHIAEAVHSAPGKKMGDGTFQLMVLRRQSSLSRMRLISLFMALEHGDHVPLKEVEIYHARAYRLEPLTDQGRYSLDGETIPFGHVQGKILPLALQVLC 463
            +L DVVG S++   ++   C L+V +YP   + N L  +K+   +R  +    T P   V   W   I     G                     VNP SGKQ+A  I    V P+  ++++E+ +  T      K+ +  LD+   +G+V +GGDG + D I GL SR P+ + A +++P+ ++ GGTGNG   +LL    EA++P++A FL+ K K     DL+ V   +G  + SFLSL++GLI+DVD+ESE +++ G+LR DL+SL  I   RTY+ R SF    + + +             +  + +W  IED+F+ +   + S  A  ++  P  ++ DG   ++++RR    SR+ L+   M    G H+ L  +E Y  RA+RLEPLT++G   +DGE I +  V  K++P    V C
Sbjct:   41 VLDDVVGVSLVNLGEEQIPC-LVVHSYP-VIETNYLHLSKK--SQRVLKEYCFTCPNREVRSQWQQAINNTLLG------QPIDEIIKPRHLQIIVNPASGKQKAAQILEQ-VRPLFDRSNLEYSIKETSSSSDTKNFVNHLDLVTTNGLVVVGGDGTIHDAIAGLMSR-PDRETA-IKIPIGVIPGGTGNGLCKTLLELSGEAYDPLNAAFLIAKGKQQ-AFDLASV-NQNGSEYYSFLSLAWGLISDVDIESEKLKFLGSLRFDLYSLMLICLLRTYKGRFSFIPHPDCQLAH---------QLGITQQGKWHIIEDEFIFLWAMNTSWAAHDMNVTPHAQLNDGAMDVLIMRR--GTSRIELLKALMRCGKGQHLSLPHMEYYKVRAFRLEPLTNKGILVIDGELIDYSPVAIKVIPDLACVNC 441          
BLAST of NO04G03140 vs. NCBI_GenBank
Match: XP_024146115.1 (sphingosine kinase 1 isoform X2 [Oryzias melastigma])

HSP 1 Score: 207.6 bits (527), Expect = 8.300e-50
Identity = 147/457 (32.17%), Postives = 226/457 (49.45%), Query Frame = 0
Query:   37 LRDVVGSSVIETLDQTQ-GCKLLVFAYPRRTDRNCLCGNKRLSLERQAQHLRLTA---PASSV--AKHWDALIKKWCRGGHQGXXXXXXXXXXXXXXXXXVNPKSGKQQAHSIYTAVVAPMLAQADIEHEMVVTMRMQHAKDMIYALDVEAWDGVVAIGGDGLLSDVINGLFSRDPENQRALLELPVAIVNGGTGNGFFSSLLHRQ--NEAFNP---ISATFLLLKAKSTLPADLSLVETADGQRHISFLSLSFGLIADVDLESEVIRWAGALRMDLFSLYAIFRSRTYRARLSF-----------------WSCEEGESSFADAIH----------LPPLHTPLPMKNEWISI-EDDFLTILISHVSHIAEAVHSAPGKKMGDGTFQLMVLRRQSSLSRMRLISLFMALEHGDHVPLKEVEIYHA--RAYRLEPLTDQGRYSLDGETIPFGHVQGK 453
            LRD VG    +  D+         + YP +    C   + R+S +R  Q  RL+A   P +++  A+ W   +++  R   Q                  VNP+SGK QA ++Y + + PML  A I H M+ T    HA++ +   D+  WD +V + GDGLL +VINGL  R   +    +  P+ I+ GG+GN   +S+ H    +  F     +S  FLL +A +  P DL  V  + GQR  SFLSL++G +ADVD+ESE  R  G+ R  + +L  +   R YR RL++                  SC    S+ +  +           LPPL  PLP  ++W+++ E DF+ +L  H SH+AE + +AP   + DG   L  +   + +SR  L+ LF A+E G H+      + HA  RA RLEPL+ +G  ++DGE + +G +Q +
Sbjct:   57 LRDCVGCRAYQKEDKADPAAYFAAYFYPLK----CRRVSSRVSRQRVEQCFRLSALQDPRANLEEAEKWARAVRE--RSARQQQPGDGVLLSCPCRMLLLVNPQSGKGQALTLYNSQIKPMLNDAGIRHTMLPTEHQNHAREFVKGADLSQWDALVIMSGDGLLYEVINGLLER--SDWEEAIRTPLGILPGGSGNALAASIHHYSGASPVFGEDLLVSCGFLLCRA-AVFPMDLVSVHLSSGQRLFSFLSLAWGFVADVDVESEKYRHFGSARFTVGTLVRLASLRIYRGRLAYLPAGSSTVLHRGAPLPVQSCPSRNSNNSVTLRRTEGGPPDSLLPPLDQPLP--DDWVAVREQDFVLMLAMHQSHLAEDLLAAPDASLSDGVIHLFYV--TAGISRAALLRLFRAMEKGTHLAAPCQHLVHAKVRALRLEPLSPKGVITVDGEVVEYGPLQAE 500          
BLAST of NO04G03140 vs. NCBI_GenBank
Match: XP_002287632.1 (sphingosine kinase [Thalassiosira pseudonana CCMP1335] >EED95075.1 sphingosine kinase [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 206.5 bits (524), Expect = 1.800e-49
Identity = 142/456 (31.14%), Postives = 227/456 (49.78%), Query Frame = 0
Query:   17 RLVMDGIEPYIDIEGSVRTLLRDVVGSSVIETLDQTQGCKLLVFAYPRRTDRNCLCGNKRLSLERQAQHLRLTAPASSVAKHWDA-----LIKKWCRGGH----QGXXXXXXXXXXXXXXXXXVNPKSG------KQQAHSIYTAVVAPMLAQADIEHEMVVTMRMQHAKDMIYALDVEAWDGVVAIGGDGLLSDVINGLFSRDPENQRALLELPVAIVNGGTGNGFFSSLLHRQNEAFNPISATFLLLKAKSTLPADLSLVETADGQR-HISFLSLSFGLIADVDLESEVIRWAGALRMDLFSLY-AIFRSRTYRARLSFWSCEEGESSFADAIHLPPLHTPLPMKNEWISIEDDFLTILISHVSHIAEAVHSAPGKKMGDGTFQLMVLRRQSSLSRMRLISLFMALEHGDHVPLKEVEIYHARAYRLEPLTDQGRYSLDGETIPFGHVQGKILP 456
            R V+D   P+ D+ GS  +L  ++   +    ++     KLLV++YP+ ++     G      +R+A+H    A         D       I+      H    +                  +NP SG      K  A  IY  ++ PML QA +EH+ +VT R                  ++A+GGDG+L +++ G+ SR  E +  + +L   IV  GT NG   SLLH   E + P+ + F + K  +T P D++  + A+  + + SFL+ S+GLIAD DL+SE +RW G +R D++++Y  I   + YRAR S+       +       +P +   LP   EW++IEDDF+   + +VSH +  +++ P  KM DG F ++++R  +S SR++L+ + + LE G H+  KE+E+    AYRLEPLT      LDGE I  G +Q  +LP
Sbjct:   96 RTVLDSFHPH-DVIGSHLSLEYNMHNPNTFHGMESYACAKLLVYSYPKSSNTKKKGG--ECIGKREARHKTYVADPRCCENFSDVRSIVQAIRSLASLEHNLPIRNANIASSNNNKPVKYLVILNPFSGGGGESSKTGARHIYETMLKPMLEQAGVEHDALVTRR----------------GAIIAMGGDGILFEIMQGVHSRLDEKE-LMQKLKFGIVGCGTSNGLAKSLLHWSGEKYGPLESIFQICKG-NTSPLDIASYQLANTTKTYTSFLTFSWGLIADCDLDSECLRWLGPIRSDIWAVYRGILCRKKYRARFSYLPPNTKST-------VPKIEEYLP--KEWVTIEDDFIVFWVCNVSHASYNMYNCPMAKMNDGLFHILIVR--ASCSRLQLLLMLLKLETGYHIGCKELEVIDCTAYRLEPLTHNSHNDLDGELIEAGPIQAHVLP 519          
BLAST of NO04G03140 vs. NCBI_GenBank
Match: WP_106233662.1 (sphingosine kinase [Pleurocapsa sp. CCALA 161] >PSB11402.1 sphingosine kinase [Pleurocapsa sp. CCALA 161])

HSP 1 Score: 200.7 bits (509), Expect = 1.000e-47
Identity = 131/426 (30.75%), Postives = 218/426 (51.17%), Query Frame = 0
Query:   37 LRDVVGSSVIETLDQTQGCKLLVFAYPRRTDRNCLCGNKRLSLERQAQHLR---LTAPASSVAKHWDALIKKWCRGGHQGXXXXXXXXXXXXXXXXXVNPKSGKQQAHSIYTAVVAPMLAQADIEHEMVVTMRMQHAKDMIYALDVEAWDGVVAIGGDGLLSDVINGLFSRDPENQRALLELPVAIVNGGTGNGFFSSLLHRQNEAFNPISATFLLLKAKSTLPADLSLVETADGQRHISFLSLSFGLIADVDLESEVIRWAGALRMDLFSLYAIFRSRTYRARLSFWSCEEGESSFADAIHLPPLHTPLPMKNE----WISIEDDFLTILISHVSHIAEAVHSAPGKKMGDGTFQLMVLRRQSSLSRMRLISLFMALEHGDHVPLKEVEIYHARAYRLEPLTDQGRYSLDGETIPFGHVQGKILP 456
            L DVVG+++I   D  + C L+V AYP++T          L +++Q + LR    T         W   I     G                     +NP SG++ A  ++   V P+L ++++ + +  T      K+++  L++ A DG+V +GGDG + D I GL SR   ++   ++LP+ I+ GGTGNG   S+L    E++NP++ATF++ K K     DL+ V T +GQ + SFLSL++GLI+DVD+ESE +++ GALR D++++  +   RTY+ R S+             +  P        +N     W  +EDDF+ +   +    A  ++  P   + DG   ++V+R+    SR  L+   +    G H+ L  +E Y   A++LEPLTD+G   +DGE + +  ++ KI+P
Sbjct:   42 LDDVVGTTLINQGDNNRPC-LVVSAYPKQT--------VGLLVKKQRRILREYYFTCEDLPKRSQWQKAINNTLVG------KAVDADIKCRKLQIVINPNSGQKLASKVFEQ-VRPLLDRSNLTYTVTETSSAADTKNLVRNLNLSALDGLVIVGGDGTIHDAIAGLMSRG--DRETAIKLPLGIIPGGTGNGLCKSILESARESYNPLTATFMIAKGKQQ-SFDLASV-TQNGQEYYSFLSLAWGLISDVDIESEKLKFLGALRFDVYAVMLLSLLRTYKGRFSY-------------LPHPDFEQIQKQENSSLTGWQVMEDDFIFLWAMNTPWAAHDMNITPNASLNDGAIDVLVMRQ--GTSRWELLQALLRCGKGKHLNLPHMEYYKVSAFKLEPLTDEGILVVDGEPVDYTPIEMKIMP 432          
BLAST of NO04G03140 vs. NCBI_GenBank
Match: XP_024146114.1 (sphingosine kinase 1 isoform X1 [Oryzias melastigma])

HSP 1 Score: 200.3 bits (508), Expect = 1.300e-47
Identity = 148/482 (30.71%), Postives = 227/482 (47.10%), Query Frame = 0
Query:   37 LRDVVGSSVIETLDQTQ-GCKLLVFAYPRRTDRNCLCGNKRLSLERQAQHLRLTA---PASSV--AKHWDALIKKWCRGGHQGXXXXXXXXXXXXXXXXXVNPKSGKQQAHSIYTAVVAPMLAQADIEHEMVVTMRMQHAKDMIYALDVEAWDGVVAIGGDGLLSDVINGLFSRDPENQRALLELPVAIVNGGTGNGFFSSLLH---------------------------RQNEAFNP---ISATFLLLKAKSTLPADLSLVETADGQRHISFLSLSFGLIADVDLESEVIRWAGALRMDLFSLYAIFRSRTYRARLSF-----------------WSCEEGESSFADAIH----------LPPLHTPLPMKNEWISI-EDDFLTILISHVSHIAEAVHSAPGKKMGDGTFQLMVLRRQSSLSRMRLISLFMALEHGDHVPLKEVEIYHA--RAYRLEPLTDQGRYSLDGETIPFGHVQGK 453
            LRD VG    +  D+         + YP +    C   + R+S +R  Q  RL+A   P +++  A+ W   +++  R   Q                  VNP+SGK QA ++Y + + PML  A I H M+ T    HA++ +   D+  WD +V + GDGLL +VINGL  R   +    +  P+ I+ GG+GN   +S+ H                           R +  F     +S  FLL +A +  P DL  V  + GQR  SFLSL++G +ADVD+ESE  R  G+ R  + +L  +   R YR RL++                  SC    S+ +  +           LPPL  PLP  ++W+++ E DF+ +L  H SH+AE + +AP   + DG   L  +   + +SR  L+ LF A+E G H+      + HA  RA RLEPL+ +G  ++DGE + +G +Q +
Sbjct:   57 LRDCVGCRAYQKEDKADPAAYFAAYFYPLK----CRRVSSRVSRQRVEQCFRLSALQDPRANLEEAEKWARAVRE--RSARQQQPGDGVLLSCPCRMLLLVNPQSGKGQALTLYNSQIKPMLNDAGIRHTMLPTEHQNHAREFVKGADLSQWDALVIMSGDGLLYEVINGLLER--SDWEEAIRTPLGILPGGSGNALAASIHHYSGWGRLCPXXXXXXXXXXXXXXDYTTRASPVFGEDLLVSCGFLLCRA-AVFPMDLVSVHLSSGQRLFSFLSLAWGFVADVDVESEKYRHFGSARFTVGTLVRLASLRIYRGRLAYLPAGSSTVLHRGAPLPVQSCPSRNSNNSVTLRRTEGGPPDSLLPPLDQPLP--DDWVAVREQDFVLMLAMHQSHLAEDLLAAPDASLSDGVIHLFYV--TAGISRAALLRLFRAMEKGTHLAAPCQHLVHAKVRALRLEPLSPKGVITVDGEVVEYGPLQAE 525          
BLAST of NO04G03140 vs. NCBI_GenBank
Match: WP_096719878.1 (sphingosine kinase [Chondrocystis sp. NIES-4102] >BAZ44818.1 putative sphingosine kinase 2 [Chondrocystis sp. NIES-4102])

HSP 1 Score: 199.9 bits (507), Expect = 1.700e-47
Identity = 130/426 (30.52%), Postives = 219/426 (51.41%), Query Frame = 0
Query:   37 LRDVVGSSVIETLDQTQGCKLLVFAYPRRTDRNCLCGNKRLSLERQAQHLRLTAPASSVAKHWDALIKKWCRGGHQGXXXXXXXXXXXXXXXXXVNPKSGKQQAHSIYTAVVAPMLAQADIEHEMVVTMRMQHAKDMIYALDVEAWDGVVAIGGDGLLSDVINGLFSRDPENQRALLELPVAIVNGGTGNGFFSSLLHRQNEAFNPISATFLLLKAKSTLPADLSLVETADGQRHISFLSLSFGLIADVDLESEVIRWAGALRMDLFSLYAIFRSRTYRARLSFWSCEEGESSFADAIHLPPLHTPLPMKNEWISIEDDFLTILISHVSHIAEAVHSAPGKKMGDGTFQLMVLRRQSSLSRMRLISLFMALEHGDHVPLKEVEIYHARAYRLEPLTDQGRYSLDGETIPFGHVQGKILPLALQVLC 463
            L+DVVG S+++   +  G  L+V AYP  T      G      +R  +    T P   V   W   I     G                     +NP SGK QA  I+  V+ P+L ++++ + +  T+     K+++  L++   DG+V +GGDG + D I GL SR   ++   +++P+ ++ GGTGNG   ++L     +++P+ A FL++K K     DL+ V+  + Q + SFLSL++GLI+DVD+ESE  ++ G+LR DL++L  I   RTY+ + +F      + S       P L T    + +W  IED+F+ +   +    A  ++ AP  ++ DG   ++++R+    SR+ L+   M L  G H+ L  +E Y  R++RLEPLT +G   +DGE + +  ++  ++P    V C
Sbjct:   42 LKDVVGVSLVKQKAELPG--LVVHAYPIVT-----TGYIFKKQQRVLKEYYFTCPNLEVRSQWQRAINNTLVG------QPPDLNIPPRHLQIIINPISGKGQAPRIFQQVL-PLLDRSNLTYTVTETLSAADTKNLVAKLNLADTDGIVIVGGDGTIHDAIAGLMSR--SDRDLAIKIPLGVIPGGTGNGLCKTILELSATSYDPLDAAFLIVKGKQQ-SFDLAAVK-QNNQDYYSFLSLAWGLISDVDIESEKFKFLGSLRFDLYALMLICLLRTYKGKFAFIPHPNCQLS-------PDLKT--ARQGKWHIIEDEFIFLWAMNTPWAAHDMNVAPYAQLNDGAMDVLLMRK--GTSRLELLKALMRLGKGKHLSLPHMEYYQVRSFRLEPLTKKGILVVDGEAVDYAPIEMTVIPNLASVNC 438          
BLAST of NO04G03140 vs. NCBI_GenBank
Match: XP_012682912.1 (PREDICTED: sphingosine kinase 1 [Clupea harengus])

HSP 1 Score: 199.1 bits (505), Expect = 2.900e-47
Identity = 128/342 (37.43%), Postives = 192/342 (56.14%), Query Frame = 0
Query:  131 VNPKSGKQQAHSIYTAVVAPMLAQADIEHEMVVTMRMQHAKDMIYALDVEAWDGVVAIGGDGLLSDVINGLFSRDPENQRALLELPVAIVNGGTGNGFFSSLLH---RQNEAFNP--ISATFLLLKAKSTLPADLSLVETADG------QRHISFLSLSFGLIADVDLESEVIRWAGALRMDLFSLYAIFRSRTYRARLSFWSCE-EGESSFADAIHLPP--LHTPL--PMKNEWISI-EDDFLTILISHVSHIAEAVHSAPGKKMGDGTFQLMVLRRQSSLSRMRLISLFMALEHGDHVPLKEVEIYHA--RAYRLEPLTDQGRYSLDGETIPFGHVQGKI 454
            +NP SGK QA S++T  V  ML +A + H +VVT R  HA++++   D+  WD +V + GDGLL +VINGL  R  E+    ++ P+ I+ GG+GN   +S+ H    Q  A     +S  FLL K    L A L L     G      QR  SFLSL++G +ADVD+ESE  R  GA R  + +L  +   R Y+ +L++   E  G+ + A     PP  L  PL  P+ ++W  + E+DF+ +L  + SH+AE +H+AP   M DG   L  ++  + +SR  L+ LF+A+E G H+      + +A  RA RLEP + +G  ++DGE + +G VQ +I
Sbjct:  286 LNPHSGKGQALSLFTGHVQHMLQEAGVPHSLVVTERQNHARELVREADLSEWDALVIMSGDGLLFEVINGLMDR--EDWEEAIQTPLGILPGGSGNALAASIHHYAGSQPVASEELLVSCGFLLCKG---LVARLDLTSVCLGSGGPQQQRLFSFLSLAWGFVADVDIESEKYRHVGAARFTVGTLVRLASLRVYQGKLAYLPAESRGDLAPASTPRGPPDSLLVPLDQPVPSDWTVVPEEDFVLVLAMYQSHLAEDLHAAPNSTMEDGLIHLFYIK--AGISRATLLRLFLAMEKGAHLATNCPHLVYAKVRALRLEPYSAKGTITVDGELVDYGPVQAQI 620          
BLAST of NO04G03140 vs. NCBI_GenBank
Match: XP_002667585.3 (sphingosine kinase 1 [Danio rerio])

HSP 1 Score: 198.4 bits (503), Expect = 5.000e-47
Identity = 123/347 (35.45%), Postives = 197/347 (56.77%), Query Frame = 0
Query:  131 VNPKSGKQQAHSIYTAVVAPMLAQADIEHEMVVTMRMQHAKDMIYALDVEAWDGVVAIGGDGLLSDVINGLFSRDPENQRALLELPVAIVNGGTGNGFFSSLLH--RQNEAFNP---ISATFLLLKAKSTLPADLSLVETADGQRHISFLSLSFGLIADVDLESEVIRWAGALRMDLFSLYAIFRSRTYRARLSFWSCEE-------GESSFADAIHLPPLHTPLPMKNEWISIED-DFLTILISHVSHIAEAVHSAPGKKMGDGTFQLMVLRRQSSLSRMRLISLFMALEHGDHVPLKEVEIYH--ARAYRLEPLTDQGRYSLDGETIPFGHVQGKILPLALQVLC 463
            VNP+SG+ QA + Y   V  ML +ADI H +V+T R  HA+D++ + D+  WD ++ + GDGLL +V+NGL  R P+ ++A ++ P+ I+ GG+GN   +S+ H  R +  +      S  FLL K   +   DL  V+ + G R  SFLSL++G +ADVD+ESE  R  GALR  L +L  +   R Y+ +L++    E       GE+   D + + P   P+P    W  +E+ +F+ +L    SH++E + +APG +  DG   L  L   + +SR  L+ LF A++ G H+      + +  A+A RLEPL+  G  ++DGE + +G VQ ++   A +++C
Sbjct:  155 VNPQSGRGQAMAQYNGHVQRMLTEADIPHTLVITERQNHARDLVRSTDLSQWDALIILSGDGLLFEVVNGLMER-PDWEKA-IQTPLGILPGGSGNALAASVHHYTRASPVWGEDLLTSCGFLLCKGLVS-GLDLISVQLSSGARLFSFLSLAWGFVADVDIESETFRQIGALRFILGTLVRLASLRIYQGKLAYLPAGETDSVSSTGENLLNDHL-MAPFGQPVP--QNWTLVEEREFVLVLAMFQSHLSEDLMAAPGARADDGIIHLFYL--TAGVSRATLLRLFRAMQSGTHLDCGCAHLVYVRAQAIRLEPLSADGVLTVDGERVHYGPVQAQVHRAAARIIC 493          
The following BLAST results are available for this feature:
BLAST of NO04G03140 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28757.16.900e-12953.90sphingosine kinase [Nannochloropsis gaditana][more]
OEU09515.14.000e-6036.90DAGK_cat-domain-containing protein [Fragilariopsis... [more]
WP_019504583.19.800e-5132.55hypothetical protein [Pleurocapsa sp. PCC 7319][more]
XP_024146115.18.300e-5032.17sphingosine kinase 1 isoform X2 [Oryzias melastigm... [more]
XP_002287632.11.800e-4931.14sphingosine kinase [Thalassiosira pseudonana CCMP1... [more]
WP_106233662.11.000e-4730.75sphingosine kinase [Pleurocapsa sp. CCALA 161] >PS... [more]
XP_024146114.11.300e-4730.71sphingosine kinase 1 isoform X1 [Oryzias melastigm... [more]
WP_096719878.11.700e-4730.52sphingosine kinase [Chondrocystis sp. NIES-4102] >... [more]
XP_012682912.12.900e-4737.43PREDICTED: sphingosine kinase 1 [Clupea harengus][more]
XP_002667585.35.000e-4735.45sphingosine kinase 1 [Danio rerio][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL076nonsL076Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR058ncniR058Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR106ngnoR106Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009451NSK009451Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G03140.1NO04G03140.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|579004gene_2086Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100002g79gene1853Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G03140.1NO04G03140.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G03140 ID=NO04G03140|Name=NO04G03140|organism=Nannochloropsis oceanica|type=gene|length=1960bp
ATGACTGCGACCACATCTTTCATTGACTACAGGACGCAAAAGgtaaggag
agtatcgcgactggatgatccttgcatgatgcttcaacagagccgactat
acagcccgcaattttcggccaacagcacaccagcagccgtccaccgaacc
cttcaataacaagggttctagcccgccgcatcttctgtttcctagataag
caggcaatccgaaatggtgctgttgaaaccttcgatctgaatcagctcat
ctttgccagtcctgcctcaccgcttggccatgaagtatcaacaaaatcac
ttctctcgttgtccttcaacccacacacatatgatagCTTGTCCGCTTGG
TTATGGACGGCATTGAACCTTATATCGACATCGAGGGCAGTGTGCGCACT
TTGCTTAGGGACGTGGTGGGGTCTTCTGTAATCGAGACTCTCGATCAAAC
GCAAGGCTGCAAGCTCCTCGTGTTCGCCTACCCCCGCAGGACGGATCGGA
ACTGTCTTTGCGGCAACAAACGGCTGTCCTTGGAGCGGCAGGCCCAACAC
CTCAGGTTAACAGCACCAGCATCCAGTGTTGCAAAGCACTGGGACGCGTT
GATCAAGAAATGGTGTCGGGGAGGACACCAGGGTGGTGAGGAAGACACCC
AACTGCAGCGGCGACGGAGACGACTGgtaagaaagcaagcgggtgagtgg
aatgtgaggcggcagaacagaagtctcttttcatttgaagtggaatcaat
tcctacttgcatcgcttcgaaactcctaaatcctatatacagCTCGTTTT
GGTAAATCCGAAGTCAGGAAAGCAGCAAGCACATTCCATCTACACCGCCG
TGGTCGCCCCTATGCTCGCTCAAGCAGACATAGAGCACGAGATGGTCGTG
ACAATGCGCATGCAGCACGCCAAGGATATGATATACGCGCTGGACGTGGA
AGCGTGGGATGGCGTCGTCGCCATAGGAGGAGATGGTCTCCTTAGCGATG
TTATTAATGGGCTTTTCTCTCGTGACCCTGAAAACCAACGCGCCCTTTTG
GAGCTTCCGGTGGCCATTGTTAACGGTGGTACAGGAAACGGATTCTTCTC
TTCCCTTCTTCACCGGCAAAACGAGGCCTTCAATCCAATCTCTGCCACTT
TCCTTTTGCTAAAAGCAAAGTCTACATTGCCTGCGGACCTCTCGCTCGTC
GAGACGGCAGATGGCCAGCGGCACATCAGCTTTCTGTCCCTCTCTTTCGG
GCTTATAGCCGACGTTGATTTGGAAAGTGAAGTAATTAGGTGGGCAGGGG
CGTTACGAATGGACTTATTCTCTCTCTACGCTATTTTTAGGAGTAGGACA
TACCGCGCCCGGCTTAGTTTTTGGTCATGCGAGGAGGGAGAAAGCTCCTT
CGCCGACGCCATTCATCTACCGCCGCTACACACGCCGCTCCCAATGAAGA
ACGAATGGATCAGCATAGAGGATGATTTTTTAACGgtacgtgcgaagggt
gcgatatgcatagagagcggacggaataatttaatcgagggtgataagct
gtgtcattgacaagagggccagttattcccctactgtgcgtcactcacat
acaactgtctgttcattcccaccccttcaaaaaacatagATATTGATCTC
GCATGTGAGTCATATCGCAGAAGCGGTGCATTCAGCACCTGGGAAGAAGA
TGGGCGACGGGACTTTCCAGCTTATGGTATTACGCCGGCAGTCTTCTCTC
TCTCGCATGCGGCTCATTTCTCTCTTCATGGCACTGGAGCACGGGGACCA
CGTACCTTTAAAGGAAGTGGAAATTTATCATGCCCGGGCATATCGGCTGG
AGCCCTTGACAGATCAGGGACGCTACTCGCTCGATGGAGAGACCATCCCC
TTTGGACACGTGCAAGGCAAGATCCTTCCTCTCGCCCTGCAAGTACTCTG
CGATTCGTAG
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protein sequence of NO04G03140.1

>NO04G03140.1-protein ID=NO04G03140.1-protein|Name=NO04G03140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=465bp
MTATTSFIDYRTQKLVRLVMDGIEPYIDIEGSVRTLLRDVVGSSVIETLD
QTQGCKLLVFAYPRRTDRNCLCGNKRLSLERQAQHLRLTAPASSVAKHWD
ALIKKWCRGGHQGGEEDTQLQRRRRRLLVLVNPKSGKQQAHSIYTAVVAP
MLAQADIEHEMVVTMRMQHAKDMIYALDVEAWDGVVAIGGDGLLSDVING
LFSRDPENQRALLELPVAIVNGGTGNGFFSSLLHRQNEAFNPISATFLLL
KAKSTLPADLSLVETADGQRHISFLSLSFGLIADVDLESEVIRWAGALRM
DLFSLYAIFRSRTYRARLSFWSCEEGESSFADAIHLPPLHTPLPMKNEWI
SIEDDFLTILISHVSHIAEAVHSAPGKKMGDGTFQLMVLRRQSSLSRMRL
ISLFMALEHGDHVPLKEVEIYHARAYRLEPLTDQGRYSLDGETIPFGHVQ
GKILPLALQVLCDS*
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Synonyms
Publications