NO04G03110, NO04G03110 (gene) Nannochloropsis oceanica

Overview
NameNO04G03110
Unique NameNO04G03110
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1879
Alignment locationchr4:852337..854215 +

Link to JBrowse

Properties
Property NameValue
DescriptionPhospholipid-transporting atpase id
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:852337..854215 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0005524ATP binding
GO:0000287magnesium ion binding
GO:0004012phospholipid-translocating ATPase activity
GO:0000166nucleotide binding
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0015914phospholipid transport
GO:0016043cellular component organization
GO:0006810transport
Vocabulary: INTERPRO
TermDefinition
IPR008250ATPase_P-typ_transduc_dom_A
IPR023299ATPase_P-typ_cyto_domN
IPR006539P-type_ATPase_IV
Homology
BLAST of NO04G03110 vs. NCBI_GenBank
Match: EWM28798.1 (phospholipid-transporting atpase id [Nannochloropsis gaditana])

HSP 1 Score: 314.3 bits (804), Expect = 7.200e-82
Identity = 155/218 (71.10%), Postives = 181/218 (83.03%), Query Frame = 0
Query:    1 MIQEAATDIKRHRSDDETNNRLAKVTSWQSGVAVTSETVCWRDIRVGNFLYISNKQPLPADMVILASIEEENICYIETSSIDGETNLKLRRAISYLPTDAPPMADPAEIIARLEADQPTVKCELPNGRVESFSGAFNIPQHEAQTAFDTATLQTDEFDKVIPVKFENVLLRGAVLRNTAWAVRVVVYTGKDIKLQRNSRHAPSKISKIDAAVNKAIYM 219
            M QEA TD+KRHRSDDETNNR+ KVTSW +G AVTSE+V WRD+ VG+ LY+SNKQPLPADMVILA+ E +NICYIETSSIDGETNLKLRRAI+YLPT   P+ DPA++IAR+E DQ  V+CELPN ++ESF+G F I   E   + + A  Q+ +F+KVIP+  ENVLLRGA+LRNT WAV VVVYTGKD KLQRNSRHAPSK+SKID AVNKAIYM
Sbjct:   35 MAQEAFTDVKRHRSDDETNNRMTKVTSWNTGAAVTSESVRWRDVHVGDLLYVSNKQPLPADMVILATSESDNICYIETSSIDGETNLKLRRAINYLPTHDTPLLDPADVIARVEEDQAVVRCELPNMKIESFTGTFCISHKEEHVSSEGAP-QSGDFNKVIPIDNENVLLRGAMLRNTRWAVGVVVYTGKDTKLQRNSRHAPSKLSKIDVAVNKAIYM 251          
BLAST of NO04G03110 vs. NCBI_GenBank
Match: EWM22623.1 (phospholipid-transporting atpase [Nannochloropsis gaditana])

HSP 1 Score: 312.0 bits (798), Expect = 3.600e-81
Identity = 209/569 (36.73%), Postives = 309/569 (54.31%), Query Frame = 0
Query:    1 MIQEAATDIKRHRSDDETNNRLAKVTSWQSGVAVTSETVCWRDIRVGNFLYISNKQPLPADMVILASIEEENICYIETSSIDGETNLKLRRAISYLPTDAPPM--ADPAEIIARLEADQPTVKCELPNGRVESFSGAFNIPQHEAQTAFDTATLQTDEFDKVIPVKFENVLLRGAVLRNTAWAVRVVVYTGKDIKLQRNSRHAPSKISKIDAAVNKAIYMVFLTDVVLVTISALILILQFEDAYFSGLTNLGY-CVPGVTPEWAMTARPDGMQWMAARSTFVQGFLTLIVLFNNF---CMYVTMEVCTYAHLYFINNDIEMHHAESDTPAKARSSIVT-DLGQIEYIFSDKTGTLTQNVMCFKRASIQGKGLNS--------------DAQP-------------GSQADDFLKVLALCHTVVIESDVMSSEGNIEGSGAAVIYQAESPDEKALVEFAREAGYELLCRTTSRITIEINGSAQ------SWTVLAVNKFDSDRKRMSIVVRDGEGSMRLLCKGADTAMLSRGSCGSVEEATKMVDHLKTFGQEGLRTLVLGYRDLTVDQY 530
            M +E   D+KRH +D ETN    ++ S +       +++  ++IRVG  + + +KQ +PADM++L S E E  CY+ETS+IDGETNLK+R+A          M   DPA+    L   Q TV+CELPN  + SFSG   + +HE             E ++  PV   N+LLRG+ +RNT W + +VVYTG+D K+ +NSR APSK+S ++  VN  +Y++    VVL T S +  ++  +   F     L Y C+   + E A  A   G    A   + +  + T   LFNNF    +YVTME+  Y   +FI+NDI+M+ +E+D PA AR+S +  DL  I+Y+FSDKTGTLT+NVM F+R S+ G    +              + QP             GS A  F+ VLA+CHTVV+ES        ++  G A  YQAESPDE+ALV  A + G+    R    + +++ G  +      ++ +L    F S RKRMS++V+  +G + LL KGAD  +  R       ++  +  HL+ F ++GLRTL+L  R+L   ++
Sbjct:  107 MGKEGFEDVKRHIADRETNTAPVEMLSLEK--PGEFDSMQRQEIRVGRVVRVLDKQMVPADMILLTSSEAEGSCYVETSNIDGETNLKIRQAAKTAADGVGSMWQDDPAD----LHGWQGTVECELPNSHIHSFSG---VLRHE------------KEGNRETPVDESNLLLRGSSVRNTKWVLGLVVYTGRDTKIVQNSREAPSKLSTVEHTVNNMLYLILTAQVVLATASVVCFVVWNKVRRF----KLDYICIEAASSENAFYAENCG---TAIEPSNLGMWFTFFTLFNNFVPISLYVTMEMVNYCQAFFIDNDIKMYDSEADMPAMARTSNMNGDLASIQYVFSDKTGTLTRNVMEFRRCSVAGTVFGNMEVSENAPPDKSVVEGQPLSDLAKQAISQGSGSAAYSFMLVLAVCHTVVMES--------LDDGGTA--YQAESPDEEALVSAAADLGFRFTGRGPGEVRLKVGGDDKAGGEELTFQLLCTIAFTSTRKRMSVIVKTPDGKVLLLTKGADNIVGGRAKEFHSTDSDAVDAHLRLFSEDGLRTLMLAVRELPESEF 637          
BLAST of NO04G03110 vs. NCBI_GenBank
Match: KXN72408.1 (aminophospholipid-transporting P-type ATPase [Conidiobolus coronatus NRRL 28638])

HSP 1 Score: 310.1 bits (793), Expect = 1.400e-80
Identity = 211/569 (37.08%), Postives = 296/569 (52.02%), Query Frame = 0
Query:    3 QEAATDIKRHRSDDETNNRLAKVTSWQSGVAVTSETVCWRDIRVGNFLYISNKQPLPADMVILASIEEENICYIETSSIDGETNLKLRRAISYLPTDAPPMADPAEII--ARLEADQPTVKCELPNGRVESFSGAFNIPQHEAQTAFDTATLQTDEFDKVIPVKFENVLLRGAVLRNTAWAVRVVVYTGKDIKLQRNSRHAPSKISKIDAAVNKAIYMVFLTDVVLVTISALILILQFEDAYFSGLTNLGYCVPGVTPEWAMTAR-PDGMQWM------AARSTFVQGFLTLIVLFNN---FCMYVTMEVCTYAHLYFINNDIEMHHAESDTPAKAR-SSIVTDLGQIEYIFSDKTGTLTQNVMCFKRASIQG-----------------------------KGLNSDAQPGSQADDFLKVLALCHTVVIESDVMSSEGNIEGSGAAVIYQAESPDEKALVEFAREAGYELLCRTTSRITIEINGSAQSWTVLAVNKFDSDRKRMSIVVRDGEGSMRLLCKGADTAMLSRGSCGSVEEATKMVDHLKTFGQEGLRTLVLGYRDLTVDQY 530
            +E   D KRHRSD ETN RL KV   ++G  V +    WRDI+VG+ + + N +  PAD+ + +S E E +CYIETS++DGETNLK+++A          + + AE I  A++   +  +K E PN  + +F+G              T  ++T   +K  P+    +LLRGAVLRNT W    V++TG D KL RN+  AP KI+ +    N             + I+ L LIL     + SG    GY        W   AR  D   ++       A + F +  LT I+LFNN     + VT+E        FINND++M++++SDTP+ AR SS+V +LGQIEYIFSDKTGTLT N M FK  ++ G                             K +N D +      +F  +LA+CHTV+ E +  + E         + YQA SPDE ALVE A + G+E + R    I + I G    + +L + +F+S RKRMS VVR  EG +RL CKGADT ++ R S    E   K + HL+ +  EGLRTL + YRD+  D+Y
Sbjct:  127 KEILEDSKRHRSDGETNARLTKVL--RNGEFVEAP---WRDIKVGDIVRVENGESFPADLALWSSSEPEGLCYIETSNLDGETNLKVKQA----------LPETAEFISPAQISQFKGHIKSEGPNDSLYTFTG--------------TLAMETPSGEKQYPLDPVQILLRGAVLRNTNWIYGSVIFTGHDSKLMRNANAAPVKITNVARMTN-------------IQIAYLFLILLILSVFCSG----GY--------WYYQARLSDSTGYLQLSAEYGAGTMFGRNILTFIILFNNLIPISLIVTLEFVKLQQAAFINNDLDMYYSKSDTPSLARTSSLVEELGQIEYIFSDKTGTLTCNQMDFKECTVYGTAYAEVVDTNRQSKLEGQDDTHYDFKTMLKRMNDDNETAKYLREFFTLLAVCHTVIPEKNNETGE---------ITYQAASPDEGALVEGAAKLGFEFVTRRPRTINVNILGKNLEYEILNICEFNSTRKRMSTVVRTPEGKIRLYCKGADTVIMERLSKSGNEIVEKTLGHLEEYACEGLRTLCMAYRDIPEDEY 632          
BLAST of NO04G03110 vs. NCBI_GenBank
Match: XP_019869508.1 (PREDICTED: LOW QUALITY PROTEIN: probable phospholipid-transporting ATPase IA [Aethina tumida])

HSP 1 Score: 307.0 bits (785), Expect = 1.100e-79
Identity = 203/550 (36.91%), Postives = 291/550 (52.91%), Query Frame = 0
Query:    2 IQEAATDIKRHRSDDETNNRLAKVTSWQSGVAVTSETVCWRDIRVGNFLYISNKQPLPADMVILASIEEENICYIETSSIDGETNLKLRRAISYLPTDAPPMADPAEIIARLEADQPTVKCELPNGRVESFSGAFNIPQHEAQTAFDTATLQTDEFDKVIPVKFENVLLRGAVLRNTAWAVRVVVYTGKDIKLQRNSRHAPSKISKIDAAVNKAIYMVFLTDVVLVTISALILILQFEDAYFSGLTNLGYCVPGVTPEWAMTARPDGMQWMAARSTFVQGFLTLIVLFNN---FCMYVTMEVCTYAHLYFINNDIEMHHAESDTPAKAR-SSIVTDLGQIEYIFSDKTGTLTQNVMCFKRASI---------------QGKGLNSDAQPGSQADDFLKVLALCHTVVIESDVMSSEGNIEGSGAAVIYQAESPDEKALVEFAREAGYELLCRTTSRITIEINGSAQSWTVLAVNKFDSDRKRMSIVVRDGEGSMRLLCKGADTAMLSRGSCGSVEEATK-MVDHLKTFGQEGLRTLVLGYRDLTVDQYAE 532
            I+E   DIKRHR+DDE N+R  +V    S + +      W+D+ VG+ + + N    PAD+VIL+S E + +C+IET+++DGETNLK+R+A+    T      D       L+  Q T++CE PN  +  F+G        A+                 P+  + +LLRGA+LRNT+W   +VVYTG + KL RNS  AP K S +D   N  I ++F    V+  I  +               N+ +     + EW +     G+         +  FLT ++LFNN     + VT+EV  +    FIN DIEM+HAE+DTPA AR S++  +LGQ++YIFSDKTGTLT+NVM FKR +I                 K L  + +   Q  D L +L++CHTV+ E    S +G       +V+Y A SPDE+ALV  A   GY    RT   + I+  G  + + +L V +F S RKRMS++VRD EG +RL CKGADT +  R    S +E+   ++ HL++F  EGLRTL     +L    + E
Sbjct:  120 IKEIIEDIKRHRADDEINHREVEVLRGNSWIKIQ-----WKDVIVGDIVKVLNNNFFPADLVILSSSEPQGMCFIETANLDGETNLKIRQALQ--TTAVATKTDD------LKDMQGTIECEAPNRHLYEFNGVLKQTNKTAE-----------------PLGPDQLLLRGAMLRNTSWVFGIVVYTGHETKLMRNSTKAPLKRSSVDKLTNIQIILLFGVLAVMCIICTVF--------------NMLWTRHHGSKEWYIGLEDSGV------DNVLFTFLTFLILFNNLIPISLQVTLEVVRFIQAIFINMDIEMYHAETDTPACARTSNLNEELGQVKYIFSDKTGTLTRNVMEFKRCAIGTEIYPITESVEESQMVKDLKENHKNADQIKDMLILLSVCHTVIPEK---SPDG-------SVVYHAASPDERALVYGASRYGYVFESRTPDYVQIDALGVKERYEILTVLEFTSSRKRMSVIVRDPEGKLRLFCKGADTVIYERLESRSKQESGDILLQHLESFATEGLRTLCCAVAELKEADFKE 609          
BLAST of NO04G03110 vs. NCBI_GenBank
Match: XP_002286256.1 (hypothetical protein THAPSDRAFT_26702 [Thalassiosira pseudonana CCMP1335] >EED95897.1 hypothetical protein THAPSDRAFT_26702 [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 306.6 bits (784), Expect = 1.500e-79
Identity = 215/583 (36.88%), Postives = 311/583 (53.34%), Query Frame = 0
Query:    1 MIQEAATDIKRHRSDDETNNRLAKVTSWQSGVAVTSETVCWRDIRVGNFLYISNKQPLPADMVILASIEEENICYIETSSIDGETNLKLRRAISYLPTDAPPM--ADPAEIIARLEADQPTVKCELPNGRVESFSGAFNIPQHEAQTAFDTATLQTDEFDKVIPVKFENVLLRGAVLRNTAWAVRVVVYTGKDIKLQRNSRHAPSKISKIDAAVNKAIYMVFLTDVVLV-TISALILILQFEDAYFSGLTNLGYCVPGVTPEWAMTARPDGMQWMAARSTFVQGFLTLIVLFNNFCMYVTMEVCTYAHLYFINNDIEMHHAESDTPAKARSSIVTDLGQIEYIFSDKTGTLTQNVMCFKRASIQG---------------------------------------KGLNSDAQPGSQ----ADDFLKVLALCHTVVIESDVMSSEGNIEGSGAAVIYQAESPDEKALVEFA-REAGYELLCRTTSRITIEIN--GSAQSWTVLAVNKFDSDRKRMSIVVRDGE--GSMR-LLCKGADTAMLSRGSCGSVEEATKMVDHLKTFGQEGLRTLVLGYRDLTVDQYAE 532
            + QEA TD +RHRSD  TN     V      + +  E+V   +I  G+ + + N++ +P D+++LAS  E    YIETSSIDGETNLKLR +  +LP+  P +   D +  IA       T+  E PN  V ++SG   +P            +   E  +  P+  EN+LLRGA+LRNT W V V  +TG D KL  NS   PSK S++D  +N+ + ++    ++ V ++  L L    ++       NL Y   G TP +              ++ F+  F+T++  F    +YV++E+ T   + +++ D++M+H +SDTPA ARS+IVTDLG ++YIFSDKTGTLT N+M FKR S+ G                                        G NS    G +    A+ FL+V+++CHTVV+E D        +G+ A   YQAESPDE ALV  A  E G++LL R  S + I  +     ++W++LAVNKFDSDRKRMS++VR     GS+  LLCKGAD++ML  G C  V++       L +F  EGLRTLVLG + L+ +  A+
Sbjct:   52 LAQEAYTDAQRHRSDKATNYHPCVVLK----LPIAFESVFRMNIHAGDLVVVRNREMIPVDLILLASSNEGGSAYIETSSIDGETNLKLRNS-PHLPSVRPGVTGGDNSPFIA-------TLTSEPPNTHVNNYSGKLTLP-----------PMTPGEPSENAPLNAENILLRGAMLRNTEWVVGVACFTGADTKLVMNSVATPSKFSQLDMLINRTVVLILAIMIICVCSLGGLSLTASNKE-----FDNLWYA--GTTPNY-------------LQNVFL--FVTMLSNFVPLSLYVSVEIITVMMMLYVSWDLQMYHKDSDTPASARSTIVTDLGLVDYIFSDKTGTLTCNIMEFKRCSVDGHVFGMPVAKAAPADSSQPVLDKGESNISSDSVHPLKHLLAGSNSTGVKGEKLTFNAEMFLRVMSICHTVVVEKD-------HDGAPAGYAYQAESPDEGALVSAASNEYGFQLLGRDFSGVKISCSCPSLTETWSILAVNKFDSDRKRMSVLVRSPPELGSVPILLCKGADSSMLIEGVCEGVKQ-------LDSFASEGLRTLVLGVKMLSEEAAAQ 575          
BLAST of NO04G03110 vs. NCBI_GenBank
Match: XP_019918069.1 (PREDICTED: probable phospholipid-transporting ATPase IA isoform X9 [Crassostrea gigas])

HSP 1 Score: 306.2 bits (783), Expect = 2.000e-79
Identity = 204/553 (36.89%), Postives = 294/553 (53.16%), Query Frame = 0
Query:    2 IQEAATDIKRHRSDDETNNRLAKVTSWQSGVAVTSETVCWRDIRVGNFLYISNKQPLPADMVILASIEEENICYIETSSIDGETNLKLRRAISYLPTDAPPMADPAEIIARLEADQPTVKCELPNGRVESFSGAFNIPQHEAQTAFDTATLQTDEFDKVIPVKFENVLLRGAVLRNTAWAVRVVVYTGKDIKLQRNSRHAPSKISKIDAAVNKAIYMVFLTDVVLVTISALILILQFEDAYFSGLTNLGYCVPGVTPEWAMTARPDGMQWMAARSTFVQGFLTLIVLFNN---FCMYVTMEVCTYAHLYFINNDIEMHHAESDTPAKAR-SSIVTDLGQIEYIFSDKTGTLTQNVMCFKRASIQG-------------------KGLNSDAQPGSQADDFLKVLALCHTVVIESDVMSSEGNIEGSGAAVIYQAESPDEKALVEFAREAGYELLCRTTSRITIEINGSAQSWTVLAVNKFDSDRKRMSIVVRDGEGSMRLLCKGADTAMLSRGSCGSVEEATKMVDHLKTFGQEGLRTLVLGYRDLTVDQYAE 532
            ++E   D KRHR DDE NNR  +V   ++G+      V W D+ VG+ + + + Q  PADM++L+S E + +CYIETS++DGETNLK+R+    LP  +  +    E +  L     TV+CELPN  +  F G        A                 IP+  + +LLRGA+LRNT W   +V+YTG D KL  NS  AP K S ++   N  I  +F   +VL              +  S + N  +    V  +W +  + +     +  S F   FLT I+L+NN     + VT+EV  +    FIN D++M+HAE+DTPA AR S++  +LGQ++YIFSDKTGTLT+N+M FK+ SI G                   + L  +        +FL ++A+CHTVV E        N  G   A+ YQA SPDE ALV+ A+E G+    RT + +T+E+NG+ + + +L V +F S RKRMS+VVR   G ++LLCKGADT +  R     + +    + HL+ F   GLRTL +   D+T + Y E
Sbjct:  116 LKEIIEDFKRHRQDDEVNNR--EVLVLRNGIWT---KVRWLDVIVGDLVKVISGQFFPADMILLSSSEPQAMCYIETSNLDGETNLKIRQG---LPQTSKLLTH--EDLLELTG---TVECELPNRHLYDFVGNIRPSGRMA-----------------IPLGPDQLLLRGAMLRNTKWIFGIVIYTGHDSKLMLNSTSAPLKRSHVEKVTNNQILFLFGVLIVL--------------SLASTIANRVWTSWHVDKDWYLAYQENSSNTDSPPSNFGYNFLTFIILYNNLIPISLQVTLEVVKFIQAIFINWDLDMYHAETDTPAMARTSNLNEELGQVKYIFSDKTGTLTRNIMVFKKCSIAGIPYGCGEDEVHGFSDPSLIENLKRNHVTAPVIREFLTLMAVCHTVVPE--------NKNGDPNAMEYQASSPDEGALVKGAKELGFFFKTRTPNTVTVEVNGNDEEYEILNVLEFTSTRKRMSVVVRTPSGEIKLLCKGADTVIYERLDDKQMYKDI-TIQHLEEFATLGLRTLCIASADVTEEFYDE 615          
BLAST of NO04G03110 vs. NCBI_GenBank
Match: XP_019918068.1 (PREDICTED: probable phospholipid-transporting ATPase IA isoform X8 [Crassostrea gigas])

HSP 1 Score: 306.2 bits (783), Expect = 2.000e-79
Identity = 204/553 (36.89%), Postives = 294/553 (53.16%), Query Frame = 0
Query:    2 IQEAATDIKRHRSDDETNNRLAKVTSWQSGVAVTSETVCWRDIRVGNFLYISNKQPLPADMVILASIEEENICYIETSSIDGETNLKLRRAISYLPTDAPPMADPAEIIARLEADQPTVKCELPNGRVESFSGAFNIPQHEAQTAFDTATLQTDEFDKVIPVKFENVLLRGAVLRNTAWAVRVVVYTGKDIKLQRNSRHAPSKISKIDAAVNKAIYMVFLTDVVLVTISALILILQFEDAYFSGLTNLGYCVPGVTPEWAMTARPDGMQWMAARSTFVQGFLTLIVLFNN---FCMYVTMEVCTYAHLYFINNDIEMHHAESDTPAKAR-SSIVTDLGQIEYIFSDKTGTLTQNVMCFKRASIQG-------------------KGLNSDAQPGSQADDFLKVLALCHTVVIESDVMSSEGNIEGSGAAVIYQAESPDEKALVEFAREAGYELLCRTTSRITIEINGSAQSWTVLAVNKFDSDRKRMSIVVRDGEGSMRLLCKGADTAMLSRGSCGSVEEATKMVDHLKTFGQEGLRTLVLGYRDLTVDQYAE 532
            ++E   D KRHR DDE NNR  +V   ++G+      V W D+ VG+ + + + Q  PADM++L+S E + +CYIETS++DGETNLK+R+    LP  +  +    E +  L     TV+CELPN  +  F G        A                 IP+  + +LLRGA+LRNT W   +V+YTG D KL  NS  AP K S ++   N  I  +F   +VL              +  S + N  +    V  +W +  + +     +  S F   FLT I+L+NN     + VT+EV  +    FIN D++M+HAE+DTPA AR S++  +LGQ++YIFSDKTGTLT+N+M FK+ SI G                   + L  +        +FL ++A+CHTVV E        N  G   A+ YQA SPDE ALV+ A+E G+    RT + +T+E+NG+ + + +L V +F S RKRMS+VVR   G ++LLCKGADT +  R     + +    + HL+ F   GLRTL +   D+T + Y E
Sbjct:  116 LKEIIEDFKRHRQDDEVNNR--EVLVLRNGIWT---KVRWLDVIVGDLVKVISGQFFPADMILLSSSEPQAMCYIETSNLDGETNLKIRQG---LPQTSKLLTH--EDLLELTG---TVECELPNRHLYDFVGNIRPSGRMA-----------------IPLGPDQLLLRGAMLRNTKWIFGIVIYTGHDSKLMLNSTSAPLKRSHVEKVTNNQILFLFGVLIVL--------------SLASTIANRVWTSWHVDKDWYLAYQENSSNTDSPPSNFGYNFLTFIILYNNLIPISLQVTLEVVKFIQAIFINWDLDMYHAETDTPAMARTSNLNEELGQVKYIFSDKTGTLTRNIMVFKKCSIAGIPYGCGEDEVHGFSDPSLIENLKRNHVTAPVIREFLTLMAVCHTVVPE--------NKNGDPNAMEYQASSPDEGALVKGAKELGFFFKTRTPNTVTVEVNGNDEEYEILNVLEFTSTRKRMSVVVRTPSGEIKLLCKGADTVIYERLDDKQMYKDI-TIQHLEEFATLGLRTLCIASADVTEEFYDE 615          
BLAST of NO04G03110 vs. NCBI_GenBank
Match: XP_019918070.1 (PREDICTED: probable phospholipid-transporting ATPase IA isoform X10 [Crassostrea gigas])

HSP 1 Score: 306.2 bits (783), Expect = 2.000e-79
Identity = 204/553 (36.89%), Postives = 294/553 (53.16%), Query Frame = 0
Query:    2 IQEAATDIKRHRSDDETNNRLAKVTSWQSGVAVTSETVCWRDIRVGNFLYISNKQPLPADMVILASIEEENICYIETSSIDGETNLKLRRAISYLPTDAPPMADPAEIIARLEADQPTVKCELPNGRVESFSGAFNIPQHEAQTAFDTATLQTDEFDKVIPVKFENVLLRGAVLRNTAWAVRVVVYTGKDIKLQRNSRHAPSKISKIDAAVNKAIYMVFLTDVVLVTISALILILQFEDAYFSGLTNLGYCVPGVTPEWAMTARPDGMQWMAARSTFVQGFLTLIVLFNN---FCMYVTMEVCTYAHLYFINNDIEMHHAESDTPAKAR-SSIVTDLGQIEYIFSDKTGTLTQNVMCFKRASIQG-------------------KGLNSDAQPGSQADDFLKVLALCHTVVIESDVMSSEGNIEGSGAAVIYQAESPDEKALVEFAREAGYELLCRTTSRITIEINGSAQSWTVLAVNKFDSDRKRMSIVVRDGEGSMRLLCKGADTAMLSRGSCGSVEEATKMVDHLKTFGQEGLRTLVLGYRDLTVDQYAE 532
            ++E   D KRHR DDE NNR  +V   ++G+      V W D+ VG+ + + + Q  PADM++L+S E + +CYIETS++DGETNLK+R+    LP  +  +    E +  L     TV+CELPN  +  F G        A                 IP+  + +LLRGA+LRNT W   +V+YTG D KL  NS  AP K S ++   N  I  +F   +VL              +  S + N  +    V  +W +  + +     +  S F   FLT I+L+NN     + VT+EV  +    FIN D++M+HAE+DTPA AR S++  +LGQ++YIFSDKTGTLT+N+M FK+ SI G                   + L  +        +FL ++A+CHTVV E        N  G   A+ YQA SPDE ALV+ A+E G+    RT + +T+E+NG+ + + +L V +F S RKRMS+VVR   G ++LLCKGADT +  R     + +    + HL+ F   GLRTL +   D+T + Y E
Sbjct:  116 LKEIIEDFKRHRQDDEVNNR--EVLVLRNGIWT---KVRWLDVIVGDLVKVISGQFFPADMILLSSSEPQAMCYIETSNLDGETNLKIRQG---LPQTSKLLTH--EDLLELTG---TVECELPNRHLYDFVGNIRPSGRMA-----------------IPLGPDQLLLRGAMLRNTKWIFGIVIYTGHDSKLMLNSTSAPLKRSHVEKVTNNQILFLFGVLIVL--------------SLASTIANRVWTSWHVDKDWYLAYQENSSNTDSPPSNFGYNFLTFIILYNNLIPISLQVTLEVVKFIQAIFINWDLDMYHAETDTPAMARTSNLNEELGQVKYIFSDKTGTLTRNIMVFKKCSIAGIPYGCGEDEVHGFSDPSLIENLKRNHVTAPVIREFLTLMAVCHTVVPE--------NKNGDPNAMEYQASSPDEGALVKGAKELGFFFKTRTPNTVTVEVNGNDEEYEILNVLEFTSTRKRMSVVVRTPSGEIKLLCKGADTVIYERLDDKQMYKDI-TIQHLEEFATLGLRTLCIASADVTEEFYDE 615          
BLAST of NO04G03110 vs. NCBI_GenBank
Match: XP_019918062.1 (PREDICTED: probable phospholipid-transporting ATPase IA isoform X1 [Crassostrea gigas])

HSP 1 Score: 306.2 bits (783), Expect = 2.000e-79
Identity = 204/553 (36.89%), Postives = 294/553 (53.16%), Query Frame = 0
Query:    2 IQEAATDIKRHRSDDETNNRLAKVTSWQSGVAVTSETVCWRDIRVGNFLYISNKQPLPADMVILASIEEENICYIETSSIDGETNLKLRRAISYLPTDAPPMADPAEIIARLEADQPTVKCELPNGRVESFSGAFNIPQHEAQTAFDTATLQTDEFDKVIPVKFENVLLRGAVLRNTAWAVRVVVYTGKDIKLQRNSRHAPSKISKIDAAVNKAIYMVFLTDVVLVTISALILILQFEDAYFSGLTNLGYCVPGVTPEWAMTARPDGMQWMAARSTFVQGFLTLIVLFNN---FCMYVTMEVCTYAHLYFINNDIEMHHAESDTPAKAR-SSIVTDLGQIEYIFSDKTGTLTQNVMCFKRASIQG-------------------KGLNSDAQPGSQADDFLKVLALCHTVVIESDVMSSEGNIEGSGAAVIYQAESPDEKALVEFAREAGYELLCRTTSRITIEINGSAQSWTVLAVNKFDSDRKRMSIVVRDGEGSMRLLCKGADTAMLSRGSCGSVEEATKMVDHLKTFGQEGLRTLVLGYRDLTVDQYAE 532
            ++E   D KRHR DDE NNR  +V   ++G+      V W D+ VG+ + + + Q  PADM++L+S E + +CYIETS++DGETNLK+R+    LP  +  +    E +  L     TV+CELPN  +  F G        A                 IP+  + +LLRGA+LRNT W   +V+YTG D KL  NS  AP K S ++   N  I  +F   +VL              +  S + N  +    V  +W +  + +     +  S F   FLT I+L+NN     + VT+EV  +    FIN D++M+HAE+DTPA AR S++  +LGQ++YIFSDKTGTLT+N+M FK+ SI G                   + L  +        +FL ++A+CHTVV E        N  G   A+ YQA SPDE ALV+ A+E G+    RT + +T+E+NG+ + + +L V +F S RKRMS+VVR   G ++LLCKGADT +  R     + +    + HL+ F   GLRTL +   D+T + Y E
Sbjct:  116 LKEIIEDFKRHRQDDEVNNR--EVLVLRNGIWT---KVRWLDVIVGDLVKVISGQFFPADMILLSSSEPQAMCYIETSNLDGETNLKIRQG---LPQTSKLLTH--EDLLELTG---TVECELPNRHLYDFVGNIRPSGRMA-----------------IPLGPDQLLLRGAMLRNTKWIFGIVIYTGHDSKLMLNSTSAPLKRSHVEKVTNNQILFLFGVLIVL--------------SLASTIANRVWTSWHVDKDWYLAYQENSSNTDSPPSNFGYNFLTFIILYNNLIPISLQVTLEVVKFIQAIFINWDLDMYHAETDTPAMARTSNLNEELGQVKYIFSDKTGTLTRNIMVFKKCSIAGIPYGCGEDEVHGFSDPSLIENLKRNHVTAPVIREFLTLMAVCHTVVPE--------NKNGDPNAMEYQASSPDEGALVKGAKELGFFFKTRTPNTVTVEVNGNDEEYEILNVLEFTSTRKRMSVVVRTPSGEIKLLCKGADTVIYERLDDKQMYKDI-TIQHLEEFATLGLRTLCIASADVTEEFYDE 615          
BLAST of NO04G03110 vs. NCBI_GenBank
Match: XP_019918072.1 (PREDICTED: probable phospholipid-transporting ATPase IA isoform X12 [Crassostrea gigas])

HSP 1 Score: 306.2 bits (783), Expect = 2.000e-79
Identity = 204/553 (36.89%), Postives = 294/553 (53.16%), Query Frame = 0
Query:    2 IQEAATDIKRHRSDDETNNRLAKVTSWQSGVAVTSETVCWRDIRVGNFLYISNKQPLPADMVILASIEEENICYIETSSIDGETNLKLRRAISYLPTDAPPMADPAEIIARLEADQPTVKCELPNGRVESFSGAFNIPQHEAQTAFDTATLQTDEFDKVIPVKFENVLLRGAVLRNTAWAVRVVVYTGKDIKLQRNSRHAPSKISKIDAAVNKAIYMVFLTDVVLVTISALILILQFEDAYFSGLTNLGYCVPGVTPEWAMTARPDGMQWMAARSTFVQGFLTLIVLFNN---FCMYVTMEVCTYAHLYFINNDIEMHHAESDTPAKAR-SSIVTDLGQIEYIFSDKTGTLTQNVMCFKRASIQG-------------------KGLNSDAQPGSQADDFLKVLALCHTVVIESDVMSSEGNIEGSGAAVIYQAESPDEKALVEFAREAGYELLCRTTSRITIEINGSAQSWTVLAVNKFDSDRKRMSIVVRDGEGSMRLLCKGADTAMLSRGSCGSVEEATKMVDHLKTFGQEGLRTLVLGYRDLTVDQYAE 532
            ++E   D KRHR DDE NNR  +V   ++G+      V W D+ VG+ + + + Q  PADM++L+S E + +CYIETS++DGETNLK+R+    LP  +  +    E +  L     TV+CELPN  +  F G        A                 IP+  + +LLRGA+LRNT W   +V+YTG D KL  NS  AP K S ++   N  I  +F   +VL              +  S + N  +    V  +W +  + +     +  S F   FLT I+L+NN     + VT+EV  +    FIN D++M+HAE+DTPA AR S++  +LGQ++YIFSDKTGTLT+N+M FK+ SI G                   + L  +        +FL ++A+CHTVV E        N  G   A+ YQA SPDE ALV+ A+E G+    RT + +T+E+NG+ + + +L V +F S RKRMS+VVR   G ++LLCKGADT +  R     + +    + HL+ F   GLRTL +   D+T + Y E
Sbjct:  116 LKEIIEDFKRHRQDDEVNNR--EVLVLRNGIWT---KVRWLDVIVGDLVKVISGQFFPADMILLSSSEPQAMCYIETSNLDGETNLKIRQG---LPQTSKLLTH--EDLLELTG---TVECELPNRHLYDFVGNIRPSGRMA-----------------IPLGPDQLLLRGAMLRNTKWIFGIVIYTGHDSKLMLNSTSAPLKRSHVEKVTNNQILFLFGVLIVL--------------SLASTIANRVWTSWHVDKDWYLAYQENSSNTDSPPSNFGYNFLTFIILYNNLIPISLQVTLEVVKFIQAIFINWDLDMYHAETDTPAMARTSNLNEELGQVKYIFSDKTGTLTRNIMVFKKCSIAGIPYGCGEDEVHGFSDPSLIENLKRNHVTAPVIREFLTLMAVCHTVVPE--------NKNGDPNAMEYQASSPDEGALVKGAKELGFFFKTRTPNTVTVEVNGNDEEYEILNVLEFTSTRKRMSVVVRTPSGEIKLLCKGADTVIYERLDDKQMYKDI-TIQHLEEFATLGLRTLCIASADVTEEFYDE 615          
The following BLAST results are available for this feature:
BLAST of NO04G03110 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28798.17.200e-8271.10phospholipid-transporting atpase id [Nannochlorops... [more]
EWM22623.13.600e-8136.73phospholipid-transporting atpase [Nannochloropsis ... [more]
KXN72408.11.400e-8037.08aminophospholipid-transporting P-type ATPase [Coni... [more]
XP_019869508.11.100e-7936.91PREDICTED: LOW QUALITY PROTEIN: probable phospholi... [more]
XP_002286256.11.500e-7936.88hypothetical protein THAPSDRAFT_26702 [Thalassiosi... [more]
XP_019918069.12.000e-7936.89PREDICTED: probable phospholipid-transporting ATPa... [more]
XP_019918068.12.000e-7936.89PREDICTED: probable phospholipid-transporting ATPa... [more]
XP_019918070.12.000e-7936.89PREDICTED: probable phospholipid-transporting ATPa... [more]
XP_019918062.12.000e-7936.89PREDICTED: probable phospholipid-transporting ATPa... [more]
XP_019918072.12.000e-7936.89PREDICTED: probable phospholipid-transporting ATPa... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL076nonsL076Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR058ncniR058Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR106ngnoR106Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009450NSK009450Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G03110.1NO04G03110.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|659943gene_2084Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100002g84gene1848Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G03110.1NO04G03110.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G03110 ID=NO04G03110|Name=NO04G03110|organism=Nannochloropsis oceanica|type=gene|length=1879bp
ATGATTCAGGAAGCCGCCACAGACATTAAGCGGCACCGTAGCGACGACGA
GACCAACAACCGCCTGGCCAAGGTCACCTCCTGGCAGTCTGGTGTGGCTG
TGACAAGCGAGACGGTGTGCTGGCGTGACATCCGCGTGGGAAACTTTCTG
TACATAAGCAACAAGCAGCCGTTGCCCGCTGACATGGTCATTTTGGCCAG
TATCGAGGAAGAAAACATCTGCTACATCGAGACTAGCTCAATTGACGGAG
AAACGAATTTGAAGCTCCGCCGCGCCATTAGCTACTTGCCAACCGACGCG
CCCCCGATGGCCGACCCTGCTGAGATTATCGCACGCCTAGAAGCCGATCA
ACCGACAGTGAAGTGTGAGTTGCCAAATGGGCGTGTTGAATCCTTCAGCG
GTGCTTTCAACATTCCCCAGCATGAGGCCCAAACGGCCTTCGATACCGCC
ACATTGCAAACGGACGAGTTCGACAAGGTCATCCCCGTTAAATTTGAGAA
CGTGCTCTTGCGCGGCGCTGTATTACGGAACACTGCCTGGGCTGTTCGTG
TCGTCGTTTATACTGGCAAGGACATCAAGCTGCAGgtacatgaagagtga
acattgttagcgtgctctgttttccttttttttggagtaccaatttatat
atcctctcacactgcttctcccctcctccccccccttagCGCAACTCTCG
CCATGCCCCCTCAAAAATTAGCAAAATCGATGCGGCAGTGAACAAGGCCA
TCTACATGGTCTTTCTGACGGACGTGGTGCTTGTCACAATTTCGGCCCTC
ATCCTCATCCTCCAGTTCGAAGACGCCTACTTCTCCGGCCTGACCAATCT
GGGCTACTGCGTCCCGGGCGTGACCCCTGAGTGGGCAATGACAGCCAGGC
CGGACGGCATGCAATGGATGGCGGCCCGATCCACCTTTGTTCAGGGGTTC
TTGACCTTAATTGTCCTCTTCAACAATTTTTGgtacgtaacttcggttgc
aaaatagcctactctttctgatgtgtcgtcgttctttccttttattttcc
cgatcagtgctcatcatcgctctacttaaatttccgtgcatacagtccct
atcagCATGTACGTGACGATGGAAGTGTGTACGTACGCGCACCTGTACTT
CATCAACAACGACATAGAGATGCATCATGCTGAAAGCGACACGCCCGCCA
AGGCCCGCAGCAGCATCGTTACGGACCTGGGGCAGATCGAGTACATCTTT
AGCGACAAGACAGGCACCCTCACACAGAATGTCATGTGTTTCAAGCGGGC
CTCTATCCAGGGCAAAgtacatggagcgcccgtcctcatgaccgaagcca
acgccacacttccaacattcagGGCCTCAACTCCGACGCGCAGCCCGGCT
CACAAGCTGACGACTTCCTCAAGGTGTTGGCGCTATGTCACACGGTGGTC
ATTGAGAGCGATGTCATGAGCAGCGAAGGTAATATCGAGGGCAGTGGGGC
TGCCGTCATCTACCAGGCTGAGAGCCCCGACGAGAAAGCGCTGGTCGAGT
TTGCCCGGGAGGCCGGCTACGAGCTCCTCTGTCGCACCACGTCCCGAATT
ACCATCGAGATCAATGGGTCTGCGCAGTCCTGGACGGTGCTGGCGGTCAA
CAAGTTCGACTCAGACCGGAAACGGATGAGCATAGTGGTGCGAGACGGAG
AGGGCAGCATGCGCCTGCTTTGCAAGGGTGCCGACACGGCCATGCTCTCA
CGAGGGAGTTGCGGGAGTGTGGAGGAGGCGACCAAGATGGTAGACCACCT
CAAGACGTTTGGTCAAGAAGGACTCCGTACCCTAGTGCTGGGTTACCGGG
ATCTAACTGTGGACCAGTATGCAGAGTAG
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protein sequence of NO04G03110.1

>NO04G03110.1-protein ID=NO04G03110.1-protein|Name=NO04G03110.1|organism=Nannochloropsis oceanica|type=polypeptide|length=532bp
MIQEAATDIKRHRSDDETNNRLAKVTSWQSGVAVTSETVCWRDIRVGNFL
YISNKQPLPADMVILASIEEENICYIETSSIDGETNLKLRRAISYLPTDA
PPMADPAEIIARLEADQPTVKCELPNGRVESFSGAFNIPQHEAQTAFDTA
TLQTDEFDKVIPVKFENVLLRGAVLRNTAWAVRVVVYTGKDIKLQRNSRH
APSKISKIDAAVNKAIYMVFLTDVVLVTISALILILQFEDAYFSGLTNLG
YCVPGVTPEWAMTARPDGMQWMAARSTFVQGFLTLIVLFNNFCMYVTMEV
CTYAHLYFINNDIEMHHAESDTPAKARSSIVTDLGQIEYIFSDKTGTLTQ
NVMCFKRASIQGKGLNSDAQPGSQADDFLKVLALCHTVVIESDVMSSEGN
IEGSGAAVIYQAESPDEKALVEFAREAGYELLCRTTSRITIEINGSAQSW
TVLAVNKFDSDRKRMSIVVRDGEGSMRLLCKGADTAMLSRGSCGSVEEAT
KMVDHLKTFGQEGLRTLVLGYRDLTVDQYAE*
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Synonyms
Publications