NO04G02830, NO04G02830 (gene) Nannochloropsis oceanica

Overview
NameNO04G02830
Unique NameNO04G02830
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1817
Alignment locationchr4:747494..749310 -

Link to JBrowse

Properties
Property NameValue
DescriptionGlycerophosphodiester phosphodiesterase domain-containing protein 1
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:747494..749310 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008081phosphoric diester hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0006629lipid metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR017946PLC-like_Pdiesterase_TIM-brl
IPR000909PLipase_C_PInositol-sp_X_dom
IPR030395GP_PDE_dom
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO04G02830 vs. NCBI_GenBank
Match: EWM28722.1 (glycerophosphodiester phosphodiesterase domain-containing protein 1 [Nannochloropsis gaditana])

HSP 1 Score: 497.3 bits (1279), Expect = 4.600e-137
Identity = 258/411 (62.77%), Postives = 310/411 (75.43%), Query Frame = 0
Query:    1 MPPTDGFASESFSCPMIMLLWSWVIFCCTSMILHHFPSLLHRPKRRIQSNSTVAETRPAVAATMPAERHNPGVTPVSDVKVASRP-IDPRFCVQHIAHRGCRKEGIPENTLTAFAHAVAAGCDVIELDVWLTIDERVVVFHDSDLERMCGTQAXXXXXXXXXXXXXVSANAKQEQGQKENIGVSDLNYDELPKIKLNGE-HWAVNDKNRKHACRIPLFSEVLELIPLDKPMIVEVKQRDPILIRKVHDMILNKGRRDQTIWFSLAEDINADLRAYDPTIPNITSVLGMLKCILLYYTGLLPFVRLDSDILGIPVDHVDYARVREQKALKALPDALCWVLAFVLGGKPPLALIPPGLFKHLRARGIPIFFLGVNDEENLKVAEWAGSTAVLTDRPQWLRKCMADGKVALKRL 410
            M  T+   S S +  MI L+  +V FC  S++LHHFP+LLHRPK+R+       ET   V +     + + G    + + VA +  +DPRF VQHIAHRG R EG+PENTL +FAHAVAAG DVIELDVWLT DE+VVVFHD+DLERMCG  A              +        ++ +IG+ DL + ELP+I L+ E HWAV+  NR  ACRIPLFSEVL L+P  K MIVEVKQ+  +LIRKVH++I+ +GR ++TIWFSL+EDINADLRAYDP+IPNI+SV+GMLKCI  YYTG+LPFVRL+ DILGIP+D VDYARVREQKALKALPDA+C +LAFVLGGKPP ALIPPGLFKHLRARGIPIFFLGVNDEE+LKVAE AGSTAVLTDRP+WL + M +GKVALK+L
Sbjct:    1 MELTEILGSVSNASVMIHLIGMYVTFCIVSILLHHFPALLHRPKKRLYEPVVQPETLDPVKSKSLCCKVSTG----TSISVAMKSNVDPRFRVQHIAHRGSRLEGLPENTLASFAHAVAAGSDVIELDVWLTKDEKVVVFHDADLERMCGAPASRAALATVDAREATTKPGTTR--ERRSIGIPDLLFHELPEISLDSEAHWAVDAGNRAEACRIPLFSEVLALVPPHKTMIVEVKQKSAVLIRKVHELIVARGRLERTIWFSLSEDINADLRAYDPSIPNISSVVGMLKCIFFYYTGILPFVRLNEDILGIPIDRVDYARVREQKALKALPDAVCAILAFVLGGKPPSALIPPGLFKHLRARGIPIFFLGVNDEEDLKVAEVAGSTAVLTDRPRWLSQRMMEGKVALKQL 405          
BLAST of NO04G02830 vs. NCBI_GenBank
Match: XP_005803423.1 (lysophospholipase D GDPD1 [Xiphophorus maculatus])

HSP 1 Score: 153.7 bits (387), Expect = 1.300e-33
Identity = 104/317 (32.81%), Postives = 158/317 (49.84%), Query Frame = 0
Query:   89 RFCVQHIAHRGCRKEGIPENTLTAFAHAVAAGCDVIELDVWLTIDERVVVFHDSDLERMCGTQAXXXXXXXXXXXXXVSANAKQEQGQKENIGVSDLNYDELPK------IKLNGEHWAVNDKNRKHACRIPLFSEVLELIPLDKPMIVEVKQRDPILIRKVHDMILNKGRRDQTIWFSLAEDINADLRAYDPTIPNITSVLGMLKCILLYYTGLLPFVRLDSDILGIPVDHVDYARVREQKALKALPDALCWVLAFVLGGKPPLALIPPGLFKHLRARGIPIFFLGVNDEENLKVAEWAGSTAVLTDRPQWLRKCM 400
            RF  +HI+HRG   E + ENT+ AF HAV  G D++ELD  LT DE+VVV HD +L+R+CG                             N  +SDL Y ELP       +    E +    +++    RIPL  +V +  P + P+ +++K  +  LI+KV ++++   R D T+W +    I       +P IP + S   +L  + L+YTGLLPFV L    L IP+  +   ++++   L      + W+   +L  K         LF+HL ARGI ++   +NDEE+ + A   G+T V+TD P  LR+ M
Sbjct:   35 RFLSKHISHRGGAGENL-ENTMAAFKHAVDLGTDMLELDCHLTKDEQVVVSHDGNLKRVCGI----------------------------NANISDLTYAELPPYLCKLGVTFQRECFCEGGEDK----RIPLLRDVFDAFP-NTPINIDIKVNNDTLIKKVSELVVKYDREDLTVWGNSRNHIVKKCYKENPHIPVLFSFPRVLHLLGLFYTGLLPFVPLKEQFLEIPMPSL-LTKLKDPSRLTRSQRLIAWLADTLLMRK--------ALFQHLTARGIQVYIWVLNDEEDFQRAFDLGATGVMTDFPTRLREFM 308          
BLAST of NO04G02830 vs. NCBI_GenBank
Match: XP_012714824.1 (glycerophosphodiester phosphodiesterase domain-containing protein 1 [Fundulus heteroclitus])

HSP 1 Score: 152.9 bits (385), Expect = 2.100e-33
Identity = 104/317 (32.81%), Postives = 159/317 (50.16%), Query Frame = 0
Query:   89 RFCVQHIAHRGCRKEGIPENTLTAFAHAVAAGCDVIELDVWLTIDERVVVFHDSDLERMCGTQAXXXXXXXXXXXXXVSANAKQEQGQKENIGVSDLNYDELPK------IKLNGEHWAVNDKNRKHACRIPLFSEVLELIPLDKPMIVEVKQRDPILIRKVHDMILNKGRRDQTIWFSLAEDINADLRAYDPTIPNITSVLGMLKCILLYYTGLLPFVRLDSDILGIPVDHVDYARVREQKALKALPDALCWVLAFVLGGKPPLALIPPGLFKHLRARGIPIFFLGVNDEENLKVAEWAGSTAVLTDRPQWLRKCM 400
            RF  +HI+HRG   E + ENT+ AF HAV  G D++ELD  LT DE VVV HD +L+R+CG                             N  +SDL Y ELP       +    E +    +++    RIPL  +V +  P + P+ +++K  +  LI+KV +M++   R D T+W +    I       +P IP + S   +L+ + L+YTGLLPFV L  + L IP+  +   ++++   L      + W+   +L  K         LF+HL ARGI ++   +NDEE+ + A   G+T V+TD P  L++ M
Sbjct:   35 RFLGRHISHRGGAGENL-ENTMAAFKHAVDLGTDMLELDCHLTKDEEVVVSHDGNLKRVCGV----------------------------NANISDLAYAELPPYLCKLGVTFQRECFCEGGEDK----RIPLLRDVFDAFP-NTPINIDIKANNDTLIKKVSEMVVKYDREDLTVWGNSRNHIVKKCYKENPHIPVLFSFPRVLQLLGLFYTGLLPFVPLREEFLEIPMPSL-ITKLKDPDRLTRSHRFIAWLADTLLMRK--------ALFQHLTARGIQVYIWVLNDEEDFQRAFDLGATGVMTDFPTRLKEFM 308          
BLAST of NO04G02830 vs. NCBI_GenBank
Match: XP_017346572.1 (PREDICTED: glycerophosphodiester phosphodiesterase domain-containing protein 1 [Ictalurus punctatus])

HSP 1 Score: 152.5 bits (384), Expect = 2.800e-33
Identity = 109/318 (34.28%), Postives = 161/318 (50.63%), Query Frame = 0
Query:   90 FCVQHIAHRGCRKEGIPENTLTAFAHAVAAGCDVIELDVWLTIDERVVVFHDSDLERMCGTQAXXXXXXXXXXXXXVSANAKQEQGQKENIGVSDLNYDELPK------IKLNGEHWAV--NDKNRKHACRIPLFSEVLELIPLDKPMIVEVKQRDPILIRKVHDMILNKGRRDQTIWFSLAEDINADLRAYDPTIPNITSVLGMLKCILLYYTGLLPFVRLDSDILGIPVDHVDYARVREQKALKALPDALCWVLAFVLGGKPPLALIPPGLFKHLRARGIPIFFLGVNDEENLKVAEWAGSTAVLTDRPQWLRKCM 400
            F  +HI+HRG   E + ENT+ AF HAV  G D++ELD  LT DE+VVV HDS+L+R  G                VSAN            +SD+ Y +LP       +    E +    +DKN      IPL  +V E  P   P+ V++K  D  LIRKV ++++   R   T+W + ++ I       +P IP + S+  +L  + L+YTGLLPFV L    L IP+  + + ++R+ + +      + W+   +L  K         LF HL ARGI ++   +NDEE+ K A   G+T V+TD P  L++ M
Sbjct:   36 FRSRHISHRGGAGENL-ENTMAAFRHAVQLGTDMLELDCHLTKDEQVVVLHDSNLKRSTG----------------VSAN------------ISDVAYADLPPYLCKLGVTFKRECFVEGGDDKN------IPLLRDVFEAFP-KTPINVDIKVNDDTLIRKVSELVVKYDREQLTVWGNSSDQIVQKCYKENPRIPLLFSLRRVLVLMGLFYTGLLPFVPLKEQFLEIPMPSITF-KLRDSRKMTRRERFITWLADTLLMRK--------ALFDHLSARGIQVYLWVLNDEEDFKRAFNIGATGVMTDYPSKLKEFM 308          
BLAST of NO04G02830 vs. NCBI_GenBank
Match: XP_015807234.1 (PREDICTED: glycerophosphodiester phosphodiesterase domain-containing protein 1 [Nothobranchius furzeri])

HSP 1 Score: 152.1 bits (383), Expect = 3.600e-33
Identity = 100/316 (31.65%), Postives = 162/316 (51.27%), Query Frame = 0
Query:   90 FCVQHIAHRGCRKEGIPENTLTAFAHAVAAGCDVIELDVWLTIDERVVVFHDSDLERMCGTQAXXXXXXXXXXXXXVSANAKQEQGQKENIGVSDLNYDELPK------IKLNGEHWAVNDKNRKHACRIPLFSEVLELIPLDKPMIVEVKQRDPILIRKVHDMILNKGRRDQTIWFSLAEDINADLRAYDPTIPNITSVLGMLKCILLYYTGLLPFVRLDSDILGIPVDHVDYARVREQKALKALPDALCWVLAFVLGGKPPLALIPPGLFKHLRARGIPIFFLGVNDEENLKVAEWAGSTAVLTDRPQWLRKCM 400
            F  +HI+HRG   E + ENT+TAF HAV  G D++ELD  LT DE+VVV HD++L+R+CG +A                             +S + Y ELP       +    E +    +++    RIPL  +V +  P + P+ +++K  +  LI+KV ++++   R + T+W + +  I       +P IP + S+  +L+ + L+YTGLLPFV L    L IP+  +   ++++   L      + W+   +L  K         LF+HL ARGI ++   +NDEE+ + A   G+T V+TD P  L++ M
Sbjct:   36 FLSRHISHRGGAGENL-ENTMTAFKHAVDLGTDMLELDCHLTKDEQVVVSHDTNLQRVCGVEA----------------------------DISSMTYAELPPYLCKLGVTFQKECFCEGGEDK----RIPLLRDVFDAFP-NTPINIDIKVNNNTLIKKVSELVVKYDRENLTVWGNSSNQIVKKCYKENPQIPVLFSLPRVLQLLGLFYTGLLPFVPLKEQFLEIPMPSI-ITKLQDPSRLTRSQRFVAWLADTLLMRK--------SLFQHLTARGIQVYIWVLNDEEDFQRAFELGATGVMTDFPTMLKEFM 308          
BLAST of NO04G02830 vs. NCBI_GenBank
Match: XP_007564216.1 (PREDICTED: glycerophosphodiester phosphodiesterase domain-containing protein 1 [Poecilia formosa] >XP_014865082.1 PREDICTED: glycerophosphodiester phosphodiesterase domain-containing protein 1 [Poecilia mexicana])

HSP 1 Score: 151.8 bits (382), Expect = 4.800e-33
Identity = 102/317 (32.18%), Postives = 158/317 (49.84%), Query Frame = 0
Query:   89 RFCVQHIAHRGCRKEGIPENTLTAFAHAVAAGCDVIELDVWLTIDERVVVFHDSDLERMCGTQAXXXXXXXXXXXXXVSANAKQEQGQKENIGVSDLNYDELPK------IKLNGEHWAVNDKNRKHACRIPLFSEVLELIPLDKPMIVEVKQRDPILIRKVHDMILNKGRRDQTIWFSLAEDINADLRAYDPTIPNITSVLGMLKCILLYYTGLLPFVRLDSDILGIPVDHVDYARVREQKALKALPDALCWVLAFVLGGKPPLALIPPGLFKHLRARGIPIFFLGVNDEENLKVAEWAGSTAVLTDRPQWLRKCM 400
            RF  +HI+HRG   E + ENT+ AF HAV  G D++ELD  LT DE+VVV HD +L+R+CG                             N  +SDL Y ELP       +    E +    +++    RIPL  +V +  P + P+ +++K  +  LI+KV ++++   R D T+W +    I       +P IP + S   +L  + L+YTGLLPF+ L    L IP+  +   ++++   L      + W+   +L  K         LF+HL ARGI ++   +NDEE+ + A   G+T V+TD P  L++ M
Sbjct:   35 RFLSKHISHRGGAGENL-ENTMAAFKHAVDLGTDMLELDCHLTKDEQVVVSHDGNLKRLCGI----------------------------NANISDLTYAELPPYLCKLGVTFQRECFCEGGEDK----RIPLLRDVFDAFP-NTPINIDIKVNNDTLIKKVSELVVKYDREDLTVWGNSRNHIVKKCYKENPHIPVLFSFPRVLHLLGLFYTGLLPFMPLKEQFLEIPMPSL-LTKLKDPSRLTRSQRLIAWLADTLLMRK--------ALFQHLTARGIQVYIWVLNDEEDFQRAFDLGATGVMTDFPTRLKEFM 308          
BLAST of NO04G02830 vs. NCBI_GenBank
Match: XP_023675217.1 (lysophospholipase D GDPD1 [Paramormyrops kingsleyae])

HSP 1 Score: 151.8 bits (382), Expect = 4.800e-33
Identity = 105/313 (33.55%), Postives = 155/313 (49.52%), Query Frame = 0
Query:   89 RFCVQHIAHRGCRKEGIPENTLTAFAHAVAAGCDVIELDVWLTIDERVVVFHDSDLERMCGTQAXXXXXXXXXXXXXVSANAKQEQGQKENIGVSDLNYDELPK--IKLNGEHWAVNDKNRKHACRIPLFSEVLELIPLDKPMIVEVKQRDPILIRKVHDMILNKGRRDQTIWFSLAEDINADLRAYDPTIPNITSVLGMLKCILLYYTGLLPFVRLDSDILGIPVDHVDYARVREQKALKALPDALCWVLAFVLGGKPPLALIPPGLFKHLRARGIPIFFLGVNDEENLKVAEWAGSTAVLTDRPQWLRKCM 400
            +F  +HI+HRG   E + ENT+ AF HAV  G D++ELD  LT DE+VVV HD++L+R+ G  A                             +SDL YD LP    KL     + +        RIPL  EV +  P D P+ +++K  D ILI+KV +++    R   T+W + +  I       +P IP + S+  ++  + L+YTGLLPFV L    L IP+  +   +++  + +     A  W+   +L  K         LF HL ARGI ++   +NDEE  K A   G+T V+TD P  L++ M
Sbjct:   35 QFLSRHISHRGGAGENL-ENTMAAFRHAVQLGTDMLELDCHLTRDEQVVVSHDANLKRLTGINAC----------------------------ISDLPYDALPPYLCKLGVTFQSESSCEGGEDKRIPLLKEVFDSFP-DTPVNIDIKVNDNILIQKVSELVKQYNREHLTVWGNASSKIVQKCYRENPHIPILFSMRRVVMLVGLFYTGLLPFVPLREQFLEIPMPSI-IRKLKGPENMTRSQRAAVWLTDTLLMRK--------ALFDHLTARGIQVYVWVLNDEEEFKRAFNLGATGVMTDFPTKLKEFM 308          
BLAST of NO04G02830 vs. NCBI_GenBank
Match: XP_014878415.1 (PREDICTED: glycerophosphodiester phosphodiesterase domain-containing protein 1 [Poecilia latipinna])

HSP 1 Score: 151.4 bits (381), Expect = 6.200e-33
Identity = 102/317 (32.18%), Postives = 158/317 (49.84%), Query Frame = 0
Query:   89 RFCVQHIAHRGCRKEGIPENTLTAFAHAVAAGCDVIELDVWLTIDERVVVFHDSDLERMCGTQAXXXXXXXXXXXXXVSANAKQEQGQKENIGVSDLNYDELPK------IKLNGEHWAVNDKNRKHACRIPLFSEVLELIPLDKPMIVEVKQRDPILIRKVHDMILNKGRRDQTIWFSLAEDINADLRAYDPTIPNITSVLGMLKCILLYYTGLLPFVRLDSDILGIPVDHVDYARVREQKALKALPDALCWVLAFVLGGKPPLALIPPGLFKHLRARGIPIFFLGVNDEENLKVAEWAGSTAVLTDRPQWLRKCM 400
            RF  +HI+HRG   E + ENT+ AF HAV  G D++ELD  LT DE+VVV HD +L+R+CG                             N  +SDL Y ELP       +    E +    +++    RIPL  +V +  P + P+ +++K  +  LI+KV ++++   R D T+W +    I       +P IP + S   +L  + L+YTGLLPF+ L    L IP+  +   ++++   L      + W+   +L  K         LF+HL ARGI ++   +NDEE+ + A   G+T V+TD P  L++ M
Sbjct:   35 RFLSKHISHRGGAGENL-ENTMAAFKHAVDLGTDMLELDCHLTKDEQVVVSHDGNLKRLCGI----------------------------NANISDLTYAELPPYLCKLGVTFQRECFCEGGEDK----RIPLLRDVFDAFP-NTPVNIDIKVNNDTLIKKVSELVVKYDREDLTVWGNSRNHIVKKCYKENPHIPVLFSFPRVLHLLGLFYTGLLPFMPLKEQFLEIPMPSL-LTKLQDPSRLTRSQRLIAWLADTLLMRK--------ALFQHLTARGIQVYIWVLNDEEDFQRAFDLGATGVMTDFPTRLKEFM 308          
BLAST of NO04G02830 vs. NCBI_GenBank
Match: XP_015223073.1 (PREDICTED: glycerophosphodiester phosphodiesterase domain-containing protein 1 [Lepisosteus oculatus])

HSP 1 Score: 150.6 bits (379), Expect = 1.100e-32
Identity = 102/316 (32.28%), Postives = 157/316 (49.68%), Query Frame = 0
Query:   90 FCVQHIAHRGCRKEGIPENTLTAFAHAVAAGCDVIELDVWLTIDERVVVFHDSDLERMCGTQAXXXXXXXXXXXXXVSANAKQEQGQKENIGVSDLNYDELP------KIKLNGEHWAVNDKNRKHACRIPLFSEVLELIPLDKPMIVEVKQRDPILIRKVHDMILNKGRRDQTIWFSLAEDINADLRAYDPTIPNITSVLGMLKCILLYYTGLLPFVRLDSDILGIPVDHVDYARVREQKALKALPDALCWVLAFVLGGKPPLALIPPGLFKHLRARGIPIFFLGVNDEENLKVAEWAGSTAVLTDRPQWLRKCM 400
            F  +HI+HRG   E + ENT+ AF HAV  G D++ELD  LT DE+VVV HDS+L+R  G  A                             + DL+Y ELP      ++    E      K++    RIPL  +V E  P   P+ +++K  +  LIRKV +++    R   T+W + + ++       +P IP + S+  +L  + L+YTGLLPFV L    L IP+  +   ++++ + +      + W+   +L  K         LF+HL ARGI ++   +NDEE+ K A   G+T V+TD P  L++ M
Sbjct:   36 FRSRHISHRGGAGENL-ENTMAAFRHAVKLGTDMLELDCHLTKDEQVVVSHDSNLKRSTGVSAL----------------------------IRDLSYAELPPYLCKLQVTFQREGCCEGGKDK----RIPLLRDVFEAFP-STPVNIDIKANNDTLIRKVSELVTEFNREHLTVWGNASNEVVQKCYRENPRIPILFSLQRVLLLVGLFYTGLLPFVPLREQFLEIPMPSI-ITKLKDPQTMTRSQRFIAWLADALLMRK--------ALFQHLTARGIQVYVWVLNDEEDFKRAFDLGATGVMTDYPTKLKEFM 308          
BLAST of NO04G02830 vs. NCBI_GenBank
Match: XP_008423660.1 (PREDICTED: glycerophosphodiester phosphodiesterase domain-containing protein 1 [Poecilia reticulata])

HSP 1 Score: 150.2 bits (378), Expect = 1.400e-32
Identity = 102/317 (32.18%), Postives = 156/317 (49.21%), Query Frame = 0
Query:   89 RFCVQHIAHRGCRKEGIPENTLTAFAHAVAAGCDVIELDVWLTIDERVVVFHDSDLERMCGTQAXXXXXXXXXXXXXVSANAKQEQGQKENIGVSDLNYDELPK------IKLNGEHWAVNDKNRKHACRIPLFSEVLELIPLDKPMIVEVKQRDPILIRKVHDMILNKGRRDQTIWFSLAEDINADLRAYDPTIPNITSVLGMLKCILLYYTGLLPFVRLDSDILGIPVDHVDYARVREQKALKALPDALCWVLAFVLGGKPPLALIPPGLFKHLRARGIPIFFLGVNDEENLKVAEWAGSTAVLTDRPQWLRKCM 400
            RF  +HI+HRG   E + ENT+ AF HAV  G D++ELD  LT DE+VVV HD +L R+CG                             N  +SDL Y ELP       +    E +    +++     IPL  +V +  P + P+ +++K  +  LI+KV ++++   R D T+W +    I       +P IP + S   +L  + L+YTGLLPFV L    L IP+  +   ++++   L      + W+   +L  K         LF+HL ARGI ++   +NDEE+ + A   G+T V+TD P  L++ M
Sbjct:   35 RFLSKHISHRGGAGENL-ENTMAAFKHAVDLGTDMLELDCHLTKDEQVVVSHDGNLTRLCGI----------------------------NANISDLTYTELPPYLCKLGVTFQRECFCEGGEDKS----IPLLRDVFDAFP-NTPINIDIKVNNDTLIKKVSELVVKYDREDMTVWGNSRNHIVKKCYKENPHIPVLFSFPRVLHLLGLFYTGLLPFVPLKEQFLEIPMPSL-LTKLKDPSRLTRSLRLIAWLADTLLMRK--------ALFQHLTARGIQVYIWVLNDEEDFQRAFDLGATGVMTDFPTRLKEFM 308          
The following BLAST results are available for this feature:
BLAST of NO04G02830 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28722.14.600e-13762.77glycerophosphodiester phosphodiesterase domain-con... [more]
XP_005803423.11.300e-3332.81lysophospholipase D GDPD1 [Xiphophorus maculatus][more]
XP_012714824.12.100e-3332.81glycerophosphodiester phosphodiesterase domain-con... [more]
XP_017346572.12.800e-3334.28PREDICTED: glycerophosphodiester phosphodiesterase... [more]
XP_015807234.13.600e-3331.65PREDICTED: glycerophosphodiester phosphodiesterase... [more]
XP_007564216.14.800e-3332.18PREDICTED: glycerophosphodiester phosphodiesterase... [more]
XP_023675217.14.800e-3333.55lysophospholipase D GDPD1 [Paramormyrops kingsleya... [more]
XP_014878415.16.200e-3332.18PREDICTED: glycerophosphodiester phosphodiesterase... [more]
XP_015223073.11.100e-3232.28PREDICTED: glycerophosphodiester phosphodiesterase... [more]
XP_008423660.11.400e-3232.18PREDICTED: glycerophosphodiester phosphodiesterase... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL081nonsL081Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR058ncniR058Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR111ngnoR111Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009532NSK009532Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G02830.1NO04G02830.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|578889gene_2056Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100002g11gene1922Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G02830.1NO04G02830.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G02830 ID=NO04G02830|Name=NO04G02830|organism=Nannochloropsis oceanica|type=gene|length=1817bp
AAAACACATAGGCACAGGCAAAACAAAGATGCCACCAACTGACGGTTTCG
CCTCAGAGTCCTTCTCCTGCCCCATGATCATGCTGTTGTGGTCGTGGGTA
ATCTTTTGCTGTACCAGCATGATCCTCCACCATTTCCCATCCCTGCTGCA
CCGCCCGAAGCGGCGTATTCAGAGCAACAGCACAGTTGCTGAGACTAGGC
CGGCGGTGGCGGCTACCATGCCTGCAGAGCGTCATAATCCGGGTGTTACA
CCCGTATCAGATGTAAAGGTGGCGAGTCGCCCGATCGACCCACGCTTTTG
CGTGCAGCACATTGCCCATAGAGGGTGTCGTAAAGAAGGCATACCTGAAA
ATACGCTGACGGCTTTTGCTCACGCCGTTGCCGCCGGGTGCGACGTGATT
GAACTGGATGTGTGGTTGACAATAGATGAGCGGGTGGTCGTCTTTCACGA
CTCAGATTTGGAGCGCATGTGCGGGACACAAGCCGCAGCAGCAGCTGCAG
CGACAGTGGCTGCTAGGAGAGCAGTTTCCGCCAATGCGAAGCAGGAGCAA
GGGCAGAAGGAAAACATAGGCGTATCGGATTTGAATTATGATGAGCTACC
AAAAATCAAATTAAACGGTGAGCATTGGGCGGTAAATGACAAGAACCGGA
AGCACGCCTGCAGGATCCCTCTCTTTTCCGAAGTCCTCGAACTCATCCCA
CTTGACAAGCCTATGATCGTCGAGGTTAAGCAGCGGGACCCGgtgagtaa
aagataggatagagaaatcgtatgtatgggcttataaaacgacattgcac
tacggagggcatggaatgctcctttcaatctgttactcccattcatcttc
tcttctcgttcattagATTCTCATCCGGAAGGTGCACGACATGATCCTCA
ACAAGGGTCGGCGTGATCAGACAATTTGGTTTAGTCTTGCAGAAGATATC
AATGCAGACCTCCGCGCCTATGACCCCACCATCCCAAATATTACCTCCGT
CTTGGGCATGCTTAAGgtaaatagatcagcctgtgtgtgcatctccctgt
ccccacttctttcctccttgtcgcccgtgtggcgtcaactttttctgagg
aataaaagcgctcactcactcctcttatttacattcaaccacaaaatgtt
cagTGCATTTTGCTCTATTACACGGGCCTCCTGCCTTTCGTTCGCCTGGA
TTCAGACATTCTCGGCATTCCCGTTGATCACGTTGACTATGCCCGTGTCC
GAGAGCAAAAAGCTCTTAAAGCCCTCCCTGATGCGCTGTGCTGGGTCTTA
GCTTTTGTCCTAGGCGGAAAGCCGCCATTGGCGCTCATCCCCCCCGGACT
TTTCAAGCATTTGCGGGCGCGGGGAATCCCAATTTTTTTCTTAGGAGTCA
ACGATGAGGAGAACCTGAAGgtaagagaagcgggaggcgggatatcgcgg
aaatcagttgtacctattctttccgttgagaagtcattaaaaacagcttc
ccttgtatgccgtgtgcagattgtgactgacttttctcctatcgcgcgtt
gtcacttttgcccccctcgtacagGTGGCTGAGTGGGCAGGATCGACCGC
TGTGCTGACCGACAGGCCCCAATGGCTAAGAAAATGCATGGCGGATGGTA
AAGTGGCTTTGAAGCGACTCTGAGTGTGGATTGGAGTGTGTGTATATGCT
GTACCTGTACCTTAACGTGTGCAATAGGGGAAGGGAAAGAGCTACAAGAT
GCGAGACAATAAAAGACTGAATTGAAATCATGGCGTAAGTATACTCGCTT
CTTTCCTTTGTGTTGGG
back to top

protein sequence of NO04G02830.1

>NO04G02830.1-protein ID=NO04G02830.1-protein|Name=NO04G02830.1|organism=Nannochloropsis oceanica|type=polypeptide|length=410bp
MPPTDGFASESFSCPMIMLLWSWVIFCCTSMILHHFPSLLHRPKRRIQSN
STVAETRPAVAATMPAERHNPGVTPVSDVKVASRPIDPRFCVQHIAHRGC
RKEGIPENTLTAFAHAVAAGCDVIELDVWLTIDERVVVFHDSDLERMCGT
QAAAAAAATVAARRAVSANAKQEQGQKENIGVSDLNYDELPKIKLNGEHW
AVNDKNRKHACRIPLFSEVLELIPLDKPMIVEVKQRDPILIRKVHDMILN
KGRRDQTIWFSLAEDINADLRAYDPTIPNITSVLGMLKCILLYYTGLLPF
VRLDSDILGIPVDHVDYARVREQKALKALPDALCWVLAFVLGGKPPLALI
PPGLFKHLRARGIPIFFLGVNDEENLKVAEWAGSTAVLTDRPQWLRKCMA
DGKVALKRL*
back to top
Synonyms
Publications