NO04G02780, NO04G02780 (gene) Nannochloropsis oceanica

Overview
NameNO04G02780
Unique NameNO04G02780
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2268
Alignment locationchr4:734574..736841 +

Link to JBrowse

Properties
Property NameValue
DescriptionHect e3 ubiquitin
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:734574..736841 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004842ubiquitin-protein transferase activity
GO:0016740transferase activity
Vocabulary: INTERPRO
TermDefinition
IPR035983Hect_E3_ubiquitin_ligase
IPR000569HECT
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
Homology
BLAST of NO04G02780 vs. NCBI_GenBank
Match: EWM28785.1 (hect e3 ubiquitin [Nannochloropsis gaditana])

HSP 1 Score: 1110.9 bits (2872), Expect = 0.000e+0
Identity = 596/759 (78.52%), Postives = 635/759 (83.66%), Query Frame = 0
Query:    1 MGQEQSAANHQHPQSLYPGAGGSPGGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASRPVNTEPGAFDIPGQQRQAGQIRAQVRIPAGVRPGQHFAVLLEGQQVMVRCPDRASPGDLIAIEFQASTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSLPPTTSGAA---GAGVPGVGSTGGSTAGPPELSPFEKLYEVVVPQGVRPGEPFVLLADGQRVTVTCPVDARPNHKIRFKLPIVPTNEQLAAYEMKYNKDGWVRCLGVDVKFHWFKVDASNSNLIGN-SAIGXXXXXXXRRPKIGNFSFEDTAFVRSFRGPRSSPELVLVPPSEVAMDTTVEGTRLNFHTLSHGAQLPFDKKVEFFRQHCSSLKVPWEKGHMEIRVRRSQLLSDSLMAFERISKENMRKIFRFEFLGEPAIDAGGVAREWYDQVTDALFNPDFGLFQYSGVDQMCMQINAASGMVEAHHDRYFRFLGRLLGKALLDGQIVRHHLVRPVMKHILGWPVVLADLEYLDAETLQNLGKLQDMDPGVLGDLCLDFTVTENFLGQSETVELVPDGANKTLDADNLDAYLEANLKFRLCDRVKVQLRELLLGFYECVPEALLTIFDFQQLELLLCGMPNLDIADWMAQTEYGGEFSRQGAHHRVVQWFWEVVRDDFDQEQRARLLQFTTGTSGVPAQGFAFLQGNDGNIRKFTVNSISLEQSVFPRAHTCFNRIDLPLYKSKKDLKERLSLAIQMESSGFSIE 756
            MGQ+QS +N Q+P S YPGAG S GG                                    +R VNTEPGAF+IPG QR  GQIRAQVRIPAGVRPGQHFAVLLEGQQVMVRCPDRASPGDLIAIEFQASTF XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX FSLPP + G                         SPFEKLYEVVVPQGVRPGEPFVLLADGQRVTVTCPVDARPN KIRFKLPIVPTNEQL AYEM+YNKDGWVRCLG DVKFHWF+VD SN    G  +A+         RPK G FS E+TAFVR+F+GP  SP+LVL+PPSEV++DTTV GTRLNFHTLSHGAQLPFDKK+EFFR+HC+SL+ PWE+GHMEIRVRR+ LL+DSLMAFE IS  NMRKIFRFEFLGEP IDAGGVAREWYDQVTDALFNPDFGLFQYSGVDQMCMQI+ ASG+VE  H RYFRFLGRLLGKALLDGQIVRHHLVRPV+KHILGWPVVLAD+EYLDAETLQNLGKLQ+MDP VLGDLCLDFTVTENFLGQS TVELVP GAN TL  +NLD YLEANL+FRLCDRVK QLRELLLGFYEC+PEALL+IFDFQQLELLLCGMPNLDI DW+  T YGGEF+R GA HRVVQWFWEVVR+DFDQEQRARLLQFTTGTSGVPAQGFAFLQGNDGNIRKFT+NSISL+QSVFPRAHTCFNRIDLPLYK+KKDLKERLSLAIQMESSGFSIE
Sbjct:    1 MGQDQSISNQQYPSSSYPGAGRSSGG-----TNGPGNRPRPTPHVSPFQQPAYNSQPGGGRTTRTVNTEPGAFEIPGHQRSTGQIRAQVRIPAGVRPGQHFAVLLEGQQVMVRCPDRASPGDLIAIEFQASTFIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFSLPPASDGGGLXXXXXXXXXXXXXXXXXXXXXXSPFEKLYEVVVPQGVRPGEPFVLLADGQRVTVTCPVDARPNQKIRFKLPIVPTNEQLQAYEMRYNKDGWVRCLGQDVKFHWFRVDGSNREQGGTANAVVGGVGGSLGRPKNGKFSIENTAFVRAFKGPPQSPDLVLLPPSEVSIDTTVPGTRLNFHTLSHGAQLPFDKKIEFFREHCNSLRTPWERGHMEIRVRRAHLLADSLMAFEGISTANMRKIFRFEFLGEPGIDAGGVAREWYDQVTDALFNPDFGLFQYSGVDQMCMQISGASGLVEPQHHRYFRFLGRLLGKALLDGQIVRHHLVRPVIKHILGWPVVLADMEYLDAETLQNLGKLQEMDPSVLGDLCLDFTVTENFLGQSHTVELVPGGANLTLGPENLDKYLEANLRFRLCDRVKTQLRELLLGFYECMPEALLSIFDFQQLELLLCGMPNLDIEDWLRNTGYGGEFARLGAQHRVVQWFWEVVRNDFDQEQRARLLQFTTGTSGVPAQGFAFLQGNDGNIRKFTINSISLDQSVFPRAHTCFNRIDLPLYKTKKDLKERLSLAIQMESSGFSIE 754          
BLAST of NO04G02780 vs. NCBI_GenBank
Match: XP_009039867.1 (hypothetical protein AURANDRAFT_38473 [Aureococcus anophagefferens] >EGB05485.1 hypothetical protein AURANDRAFT_38473 [Aureococcus anophagefferens])

HSP 1 Score: 648.7 bits (1672), Expect = 2.300e-182
Identity = 356/726 (49.04%), Postives = 458/726 (63.09%), Query Frame = 0
Query:   70 PGAFDIPGQQRQAGQIRAQVRIPAGVRPGQHFAVLLEG----------------------------QQVMVRCPDRASPGDLIAIEFQASTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSLPPTTSGAAGAGVPGVGSTGGSTAGPPELSPF-EKLYEVVVPQGVRPGEPFVLLADGQRVTVTCPVDARPNHKIRFKLPIVPTNEQLAAYEMKYNKDGWVRCLGVDVKFHWFKVDASNSNLIGNSAIGXXXXXXXRRPKIGNFSFEDTAFVRSFR-------GPRSSPELVLVPPSEVAMDTTV----EGTRLNFHTLSHGAQLPFDKKVEFFRQHCSSLKVPWEKGHMEIRVRRSQLLSDSLMAFERISKENMRKIFRFEFLGEPAIDAGGVAREWYDQVTDALFNPDFGLFQYSGVDQMCMQINAASGMVEAHHDRYFRFLGRLLGKALLDGQIVRHHLVRPVMKHILGWPVVLADLEYLDAETLQNLGKLQDMDPGVLGDLCLDFTVTENFLGQSETVELVPDGANKTLDADNLDAYLEANLKFRLCDRVKVQLRELLLGFYECVPEALLTIFDFQQLELLLCGMPNLDIADWMAQTEYGGEFSRQGAHHRVVQWFWEVVRDDFDQEQRARLLQFTTGTSGVPAQGFAFLQGNDGNIRKFTVNSISLEQSVFPRAHTCFNRIDLPLYKSKKDLKERLSLAIQMESSGFSIE 756
            PGA+ +PG QR+  Q    V +PAG+RPGQ F V+  G                            Q  M   P     G+   +       XXXXXXXXXXXXX                          +   T S   G G P  G++  S +     SPF  +++EV VPQGVRPG+ F L+A+GQRV VTCP +ARP  KIRF+LPI  +++++ + ++ Y KDGW+RCL  D+ FHW + +            G        + K+  ++FE TAFVR  R         +++  L LVP  + A+ T V     GT L    LS  A +PF  K  +FRQ  + L+VPWE GH++I VRR  LL DS+ A E I++ +MRKIFRFEF+ EP +DAGGVAREW+  V+D LFNPDF L+ YS ++QMCMQIN +SG+    H RYF F GRLLGKAL D QIV  HLVRP+ KHILGWP+ +ADLE LDA+T  NL KL+D+D   +   CLDFTVTE+  G ++TVEL  DGAN T+   N+D Y++  +++RL DRVK Q++ LL+GFY+ VPEALL++FDFQ+LELLLCG+P +DI DW   TEY G++ R+G+ H+VV+WFWEVV DDFD+E +ARLLQF TGTSGVPAQGF  LQGND NIRKFT+NSI    SVFP+AHTCFNRIDLPLY SKK LK+ L++AIQME++GF I+
Sbjct:   40 PGAYSVPGSQRRQAQF--YVTVPAGIRPGQEFPVIANGQXXXXXXXXXXXXXXXXXXXAPRSSQGTQAYMATVPHGVRSGEQFPVLVNNQQXXXXXXXXXXXXXXVRTVFKSVCNSLFKQVRIMVPTSRRGANQGTMSSVQGGGSPSRGASPSSQSNDAVRSPFGNQMFEVNVPQGVRPGQAFALIANGQRVMVTCPANARPGQKIRFQLPIKLSSDEIQSIKLNYQKDGWIRCLSTDLTFHWVRSE------------GEVDSEQEAKKKL-EWAFEQTAFVRELRTLTVGTSTSKATHSLQLVPAKDAALSTVVPAINNGTSL-AQELSRYAAMPFQHKEAWFRQQIAKLQVPWEDGHIKINVRRENLLEDSMEATESITQADMRKIFRFEFIAEPGVDAGGVAREWFQLVSDMLFNPDFALWSYSSINQMCMQINPSSGIANDEHLRYFHFTGRLLGKALFDRQIVAGHLVRPLYKHILGWPLTVADLEQLDADTYANLCKLKDLDD--VEVCCLDFTVTEDHWGTAQTVELKSDGANCTVTNSNVDDYIQLQMRYRLLDRVKEQVKALLIGFYDVVPEALLSVFDFQELELLLCGLPEIDIEDWKRNTEYTGDYERKGSSHKVVKWFWEVVVDDFDEEHKARLLQFVTGTSGVPAQGFRALQGNDNNIRKFTINSIPETVSVFPKAHTCFNRIDLPLYDSKKKLKKFLTMAIQMEATGFDID 747          
BLAST of NO04G02780 vs. NCBI_GenBank
Match: XP_009041254.1 (hypothetical protein AURANDRAFT_55365 [Aureococcus anophagefferens] >EGB03976.1 hypothetical protein AURANDRAFT_55365 [Aureococcus anophagefferens])

HSP 1 Score: 598.6 bits (1542), Expect = 2.700e-167
Identity = 294/533 (55.16%), Postives = 378/533 (70.92%), Query Frame = 0
Query:  234 VTCPVDARPNHKIRFKLPIVPTNEQLAAYEMKYNKDGWVRCLGVDVKFHWFKVDASNSNLIGNSAIGXXXXXXXRRPKIGNFSFEDTAFVRSFR-------GPRSSPELVLVPPSEVAMDTTV----EGTRLNFHTLSHGAQLPFDKKVEFFRQHCSSLKVPWEKGHMEIRVRRSQLLSDSLMAFERISKENMRKIFRFEFLGEPAIDAGGVAREWYDQVTDALFNPDFGLFQYSGVDQMCMQINAASGMVEAHHDRYFRFLGRLLGKALLDGQIVRHHLVRPVMKHILGWPVVLADLEYLDAETLQNLGKLQDMDPGVLGDLCLDFTVTENFLGQSETVELVPDGANKTLDADNLDAYLEANLKFRLCDRVKVQLRELLLGFYECVPEALLTIFDFQQLELLLCGMPNLDIADWMAQTEYGGEFSRQGAHHRVVQWFWEVVRDDFDQEQRARLLQFTTGTSGVPAQGFAFLQGNDGNIRKFTVNSISLEQSVFPRAHTCFNRIDLPLYKSKKDLKERLSLAIQMESSGFSIE 756
            VTCP +ARP  KIRF+LPI  +++++ + ++ Y KDGW+RCL  D+ FHW + +A   +                  K   ++FE TAFVR  R         +++  L LVP  + A+ T V     GT L    LS  A +PF  K  +FRQ  + L+VPWE GH++I VRR  LL DS+ A E I++ +MRKIFRFEF+ EP +DAGGVAREW+  V+D LFNPDF L+ YS ++QMCMQIN +SG+    H RYF F GRLLGKAL D QIV  HLVRP+ KHILGWP+ +ADLE LDA+T  NL KL+D+D   +   CLDFTVTE+  G ++TV+L PDGAN T+  +N+D Y++  +++RL DRVK Q++ LL+GFY+ VPEALL++FDFQ+LELLLCG+P +DI DW   TEY G++ R+GA H+VV+WFWEVV DDFD+E +ARLLQF TGTSGVPAQGF  LQGND NIRKFT+NSI    SVFP+AHTCFNRIDLPLY SKK LK+ L++AIQME++GF I+
Sbjct:    2 VTCPANARPGQKIRFQLPIKLSSDEIQSIKLNYQKDGWIRCLSTDLTFHWVRSEAEADS-------------DHESKKKLEWAFERTAFVRELRTLTVGTSTSKATHSLQLVPAKDAALSTVVPAINNGTSL-AQELSRYAAMPFQHKEAWFRQQIAKLQVPWEDGHIKINVRRENLLEDSMEATESITQADMRKIFRFEFIAEPGVDAGGVAREWFQLVSDMLFNPDFALWSYSSINQMCMQINPSSGIANDEHLRYFHFTGRLLGKALFDRQIVAGHLVRPLYKHILGWPLTVADLEQLDADTYANLCKLKDLDD--VEVCCLDFTVTEDHWGTAQTVDLKPDGANCTVTNNNVDEYIQLQMRYRLLDRVKEQVKALLIGFYDVVPEALLSVFDFQELELLLCGLPEIDIEDWKRNTEYTGDYERKGASHKVVKWFWEVVVDDFDEEHKARLLQFVTGTSGVPAQGFRALQGNDNNIRKFTINSIPETVSVFPKAHTCFNRIDLPLYDSKKKLKKFLTMAIQMEATGFDID 518          
BLAST of NO04G02780 vs. NCBI_GenBank
Match: GAX29516.1 (E3 ubiquitin-protein ligase NEDD4 [Fistulifera solaris])

HSP 1 Score: 535.8 bits (1379), Expect = 2.200e-148
Identity = 286/699 (40.92%), Postives = 407/699 (58.23%), Query Frame = 0
Query:   76 PGQQRQAGQIRAQVRIPAGVRPGQHFAVLLEGQQVMVRCPDRASPGDLIAIEFQASTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSLPPTTSGAAGAGVPGVGSTGGSTAGPPELSPFE-KLYEVVVPQGVRPGEPFVLLADGQRVTVTCPVDARPNHKIRFKLPIVPTNE-----QLAAYEMKYNKDGWVRCLGV-DVKFHWFKVDASNSNLIGNSAIGXXXXXXXRRPKIGNFSFEDTAFVRSFRGPRSSPE------LVLVPPSEVAMDTTVEG----TRLNFHTLSHGAQLPFDKKVEFFRQHCSSLKVPWEKGHMEIRVRRSQLLSDSLMAFERISKENMRKIFRFEFLGEPAIDAGGVAREWYDQVTDALFNPDFGLFQYSGVDQMCMQINAASGMVEAHHDRYFRFLGRLLGKALLDGQIVRHHLVRPVMKHILGWPVVLADLEYLDAETLQNLGKLQDMDPG--VLGDLCLDFTVTENFLGQSETVELVPDGANKTLDADNLDAYLEANLKFRLCDRVKVQLRELLLGFYECVPEALLTIFDFQQLELLLCGMPNLDIADWMAQTEYGGEFSRQGAHHRVVQWFWEVVRDDFDQEQRARLLQFTTGTSGVPAQGFAFLQGNDGNIRKFTVNSISLEQSVFPRAHTCFNRIDLPLYKSKKDLKERLSLAIQMESSGFSIE 756
            P + R  G     V IP G+R G  F V ++GQQ+MV CP  A+PG  + I                                                              VG +G   +    ++  E +L+EV VPQGV+PG+ F LLA G RV VTCP++A P  +IRFKLP   T +     +    ++ Y+KDGW R + V D+KF W ++D  N ++  N+                 F  E +A+VR         E      + LVP S+  +D+ V+       + +  ++      F++K  +F++ C  L+V W +GHM I VRR+ LL DS+ A   ++++++RK++RFEF+GE  IDAGG+ REW++ VT  +F+PD GL+  S  +QMCMQIN AS  V   +  Y+RFLGR++GKAL + Q+V  H+V+ + KH+LGWP+   D+  +D E  QNL +L+D+      L  LCLDF+ T+ F+G  E V+LVP G+N  +  DN   YLEA L++R+ DRVK QL ELLLGF++ +PE LLT+FDFQ++ELL+CG+P +D+ DW   TEY GE+      +    WFWEVV D+FDQE +ARLLQF TGTSGVPA+GF  LQGNDGNIRKFT++ + +   ++PRAHTCFNRIDLP+Y++K +L+E+L LA+ M ++GF IE
Sbjct:  119 PVEDRDGGPPAYMVTIPEGIRGGSQFPVTIQGQQLMVTCPPNAAPGTKVRI-------------------------------------------------XXXXXXXXXXXSSVGMSGNPDSKRKSMADEETQLFEVQVPQGVKPGQSFALLAAGVRVLVTCPLNAGPGQRIRFKLPKALTTKRKPRSEAVEIKLSYDKDGWTRTIRVSDMKFQWVRMD-DNGDIDTNT----------------RFDAEKSAYVRKLTFQPGGDERVRDGVMTLVPASDAFVDSRVKAYNGEVLVTYSEIADAQVKGFEEKAVWFQEKCQKLRVEWSEGHMRINVRRNFLLEDSVDAVMSLNRKDLRKVWRFEFIGEMGIDAGGLTREWFELVTQEIFDPDMGLWMSSETNQMCMQINPASKFVCDDYLVYYRFLGRVMGKALFEMQLVNGHMVQYIYKHLLGWPITFKDIATIDEEYHQNLKQLKDLHENGEDLEMLCLDFSTTQEFMGAKEEVDLVPGGSNIEVTNDNFPEYLEACLRYRMMDRVKDQLTELLLGFFDVIPEPLLTVFDFQEIELLMCGLPKIDMDDWREHTEYSGEYEHVNGDYPTCHWFWEVV-DEFDQEMKARLLQFVTGTSGVPARGFGVLQGNDGNIRKFTIHGVHVGVCLYPRAHTCFNRIDLPMYETKDELREKLKLAVTMVATGFDIE 750          
BLAST of NO04G02780 vs. NCBI_GenBank
Match: GAX13457.1 (E3 ubiquitin-protein ligase NEDD4 [Fistulifera solaris])

HSP 1 Score: 533.5 bits (1373), Expect = 1.100e-147
Identity = 285/698 (40.83%), Postives = 407/698 (58.31%), Query Frame = 0
Query:   76 PGQQRQAGQIRAQVRIPAGVRPGQHFAVLLEGQQVMVRCPDRASPGDLIAIEFQASTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSLPPTTSGAAGAGVPGVGSTGGSTAGPPELSPFEKLYEVVVPQGVRPGEPFVLLADGQRVTVTCPVDARPNHKIRFKLPIVPTNE-----QLAAYEMKYNKDGWVRCLGV-DVKFHWFKVDASNSNLIGNSAIGXXXXXXXRRPKIGNFSFEDTAFVRSFRGPRSSPE------LVLVPPSEVAMDTTVEG----TRLNFHTLSHGAQLPFDKKVEFFRQHCSSLKVPWEKGHMEIRVRRSQLLSDSLMAFERISKENMRKIFRFEFLGEPAIDAGGVAREWYDQVTDALFNPDFGLFQYSGVDQMCMQINAASGMVEAHHDRYFRFLGRLLGKALLDGQIVRHHLVRPVMKHILGWPVVLADLEYLDAETLQNLGKLQDMDPG--VLGDLCLDFTVTENFLGQSETVELVPDGANKTLDADNLDAYLEANLKFRLCDRVKVQLRELLLGFYECVPEALLTIFDFQQLELLLCGMPNLDIADWMAQTEYGGEFSRQGAHHRVVQWFWEVVRDDFDQEQRARLLQFTTGTSGVPAQGFAFLQGNDGNIRKFTVNSISLEQSVFPRAHTCFNRIDLPLYKSKKDLKERLSLAIQMESSGFSIE 756
            P + R  G     V IP G+R G  F V ++GQQ++V CP  A+PG  + I                                            X          +  G+ G   +        E     +L+EV VPQGV+PG+ F LLA G RV VTCP++A P  +IRFKLP   T +     +    ++ Y+KDGW R + V D+KF W ++D  N ++  N+                 F  E +A+VR         E      + LVP S+  +D+ V+       +++  ++      F++K  +F++ C  L+V W +GHM I VRR+ LL DS+ A   ++++++RK++RFEF+GE  IDAGG+ REW++ VT  +F+PD GL+  S  +QMCMQIN AS  V   +  Y+RFLGR++GKAL + Q+V  H+V+ + KH+LGWP+   D+  +D E  QNL +L+D+      L  LCLDF+ T+ F+G  E V+LVP G+N  +  DN   YLEA L++R+ DRVK QL ELLLGF++ +PE LLT+FDFQ++ELL+CG+P +D+ DW   TEY GE+      +    WFWEVV D+FDQE +ARLLQF TGTSGVPA+GF  LQGNDGNIRKFT++ + +   ++PRAHTCFNRIDLP+Y++K +L+E+L LA+ M ++GF IE
Sbjct:  121 PVEDRDGGPPAYMVTIPEGIRGGSQFPVTIQGQQLVVTCPPNAAPGTKVRI--------------------------------------------XXXXXXXXXXESSVGISGNPDSKRKLMADEE----TQLFEVQVPQGVKPGQSFALLAAGVRVLVTCPLNAGPGQRIRFKLPKALTTKRKPRSEAVEIKLSYDKDGWTRTIRVSDMKFQWVRMD-DNGDIDTNT----------------RFDAEKSAYVRKLTFQPGGDERVRDGVMTLVPASDAFVDSRVKAYNGEVLVSYSEIAEAQVKGFEEKAVWFQEKCQKLRVEWSEGHMRINVRRNFLLEDSVDAVMSLNRKDLRKVWRFEFIGEMGIDAGGLTREWFELVTQEIFDPDMGLWMSSETNQMCMQINPASKFVCDDYLVYYRFLGRVMGKALFEMQLVNGHMVQYIYKHLLGWPITFKDIATIDEEYHQNLKQLKDLHENGEDLEMLCLDFSTTQEFMGAKEEVDLVPGGSNIEVTNDNFPEYLEACLRYRMMDRVKDQLTELLLGFFDVIPEPLLTVFDFQEIELLMCGLPKIDMDDWREHTEYSGEYEHVNGDYPTCHWFWEVV-DEFDQEMKARLLQFVTGTSGVPARGFGVLQGNDGNIRKFTIHGVHVGVCLYPRAHTCFNRIDLPMYETKDELREKLKLAVTMVATGFDIE 752          
BLAST of NO04G02780 vs. NCBI_GenBank
Match: CBJ29865.1 (ubiquitin protein ligase [Ectocarpus siliculosus])

HSP 1 Score: 530.4 bits (1365), Expect = 9.100e-147
Identity = 302/749 (40.32%), Postives = 407/749 (54.34%), Query Frame = 0
Query:   65 PVNTEPGAFDIP--GQQRQAGQIRAQVRIPAGVRPGQHFAVLLEGQQVMVRCPDRASPGDLIAIEFQASTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSLPPTTSGAAGAGVPGVGSTGGSTAGPPELSP--------------FEKLYEVVVPQGVRPGEPFVLLADGQRVTVTCPVDARPNHKIRFKLPIVPTNEQLAAYEMKYN-KDGWVRCLGVDVKFHWFKVDASNSN-------------------------------------LIGNSAIGXXXXXXXRRPKIGNFSF--EDTAFVRSFRGPRSSP-ELVLVPPSEVAMDTTVEGTRLNFHTLSHGAQLPFDKKVEFFRQHCSSLKVPWEKGHMEIRVRRSQLLSDSLMAFERISKENMRKIFRFEFLGEPAIDAGGVAREWYDQVTDALFNPDFGLFQYSGVDQMCMQINAASGMVEAHHDRYFRFLGRLLGKALLDGQIVRHHLVRPVMKHILGWPVVLADLEYLDAETLQNLGKLQDMDPGVLGDLCLDFTVTENFLGQSETVELVPDGANKTLDADNLDAYLEANLKFRLCDRVKVQLRELLLGFYECVPEALLTIFDFQQLELLLCGMPNLDIADWMAQTEYGGEFSRQGAHHRVVQWFWEVVRDDFDQEQRARLLQFTTGTSGVPAQGFAFLQGNDGNIRKFTVNSI-SLEQSVFPRAHTCFNRIDLPLYKSKKDLKERLSLAIQMESSGFSIE 756
            P    PGA+ IP  G +     I   V +P GVRPGQ F V+  G  ++VRCP     G  I +                                              ++PP  S      V  V S     A PP ++P                + +EV VP GVRPG+PF L+A GQRV V CP DARP  KIRF+LPI  +  QL  Y + Y+ KDGWVRC+G D+KFHW + D   ++                                                     + K+G  SF  E +AFVR     R     L LV   E  +D +V    L F  LS  +QLPF +KV++F + C  L+VPW+  H  +++RRS LL DS+ A E +  E+MR+ FRFEFLGEP +DAGGVAREW+  V++ LFNPDF LFQYS ++QMCMQI+A SG+    H ++F F+GRLLGKAL DGQ+V+ HLVRP+ KH+LGWP+  +DLE++D  T ++L K+ ++D   +   CLDFTVTE+ LG  E V+L   GA+  +  DN+  Y+E  LK RL  R++ QL   L+GFY+ +PEALL++FDFQ+LELL+CG+P++D+ DW   T+Y GEF R+  +H+        VR              T  T GV        QGNDGNIR+FT+N +  L+  +FP++HTCFNRIDLP+Y +KK+L+E L++AI ME +GF IE
Sbjct:   56 PAEQNPGAYSIPGAGSRTNVDSIPYTVTVPNGVRPGQEFQVMAGGLPMVVRCPPDVRGGSRIMV---------------------------LVPRQHRQQQSRNAQVYMATVPPGVSPGGEFNVM-VNSHPVRVACPPNVTPGMQIRIRLEEPQGALHQTFEVAVPPGVRPGQPFALIAGGQRVMVHCPHDARPGQKIRFQLPIQLSEAQLQTYNIHYSGKDGWVRCVGTDLKFHWVRHDEDGADPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSVSDKVTLKRKLGGSSFRIEGSAFVRKLSKLRPRHFMLELVRAEEATLDASVPEANLTFQHLSRASQLPFKEKVDWFNKQCDLLRVPWDVEHQHLKIRRSNLLEDSMAAMESVRSESMRQRFRFEFLGEPGVDAGGVAREWFHLVSEGLFNPDFALFQYSSINQMCMQISANSGVANEQHLQHFHFVGRLLGKALFDGQLVQAHLVRPLYKHLLGWPIAFSDLEHVDHFTHESLIKMTELDD--VEVCCLDFTVTEDRLGSMEVVDLKEGGADLDVTNDNIGEYVELVLKHRLLMRMRDQLTAFLVGFYDVIPEALLSVFDFQELELLMCGLPHIDLTDWQRNTDYTGEFERKAGNHK--PCLLNAVR--------------TPCTIGVS-------QGNDGNIRRFTINGLPDLDSGLFPKSHTCFNRIDLPMYSNKKELEEYLTMAINMECTGFGIE 751          
BLAST of NO04G02780 vs. NCBI_GenBank
Match: EJK74143.1 (hypothetical protein THAOC_04195, partial [Thalassiosira oceanica])

HSP 1 Score: 522.7 bits (1345), Expect = 1.900e-144
Identity = 286/703 (40.68%), Postives = 408/703 (58.04%), Query Frame = 0
Query:   89 VRIPAGVRPGQHFAVLLEGQQVMVRCPDRASPGDLIAIEFQASTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSLPP-TTSGAAGAGVPGVGSTGGSTAGPPELSPFE-KLYEVVVPQGVRPGEPFVLLADGQRVTVTCPVDARPNHKIRFKLPIVPTNE------QLAAYEMKYNKDGWVRCLGV-DVKFHWFKVDASNSNLIGNSAIGXXXXXXXRRPKIGNFSFEDTAFVRSFRGPRSSPELVLVPPSEVAMDTTVEGTR----LNFHTLSHGAQLPFDKKVEFFRQHCSSLKVPWEKGHMEIRVRRSQLLSDSLMAFERISKENMRKIFRFEFLGEPAIDAGGVAREWYDQVTDALFNPDFGLFQYSGVDQMCMQINAASGMV----------EAH-------------HDRYFRFLGRLLGKALLDGQIVRHHLVRPVMKHILGWPVVLADLEYLDAETLQNLGKLQDMDPGVLGDLCLDFTVTENFLGQSETVELVPDGANKTLDADNLDAYLEANLKFRLCDRVKVQLRELLLGFYECVPEALLTIFDFQQLELLLCGMPNLDIADWMAQTEYGGEFSRQGAHHRVVQWFWEVVRDDFDQEQRARLLQFTTGTSGVPAQGFAFLQGNDGNIRKFTVNSISLEQSVFPRAHTCFNRIDLPLYKSKKDLKERLSLAIQMESSGFSIE 756
            V+IP G+R GQ F V ++GQQ+ V CP+ A PG  + I                                               +PP   S +     P         A P   S  + +++EV+VP+GV PG+PF LLA G RV VTCP +A    KIRF LPI   N+      +LA  ++ Y+KDGW R +   D+KF W + D +     G            +   +    F D               + LV P +  +D+ ++       +++  +++     +  K+++F++ C  L   W +GHM + VRR  LLSDS+ A   +S++++RK++RFEF+GE  IDAGG+AREW++ VTD +F+PD GL+Q S  +QMC+QIN ASG             +H             H  YFRF+GR++GKA+ D Q+V+ HLV+ + KHILGWPV+ +DL+ +D E   +L  L+DM   +   L  DFT TE  LG   TVELVP GA+  +  +NL  Y+EANLK+RL  R + QL ELLLGF++ +PE LLTIFDFQ+LELL+CG+P +D+ +W   TEY G++ R+G +H+V  WFWE+V  ++DQE +ARLLQF TGTSGVPA+GF+ LQGNDGN+R+FT++ ++LE  V+PR+HTCFNRIDLP+Y SK +L+E+L +AI M ++GF IE
Sbjct:    8 VKIPEGIRGGQQFPVTIQGQQLSVTCPNAARPGMSVRI-----------------------------------------------VPPXXXSDSPSLDRP---RQPQRMANPNNRSNDKMQMFEVIVPEGVYPGQPFALLAGGVRVLVTCPKNAAAGQKIRFNLPIRLVNKPDGPKSKLAEIKLSYDKDGWTRTIRANDMKFLWTRFDENG----GVDTATSQRFDDTKSAYVLKLDFHDG------HDKMRHGSVSLVTPEKGVVDSNIKSVTGQELVSYQDIANAQNKSYKDKIQWFQETCGQLCAEWNEGHMRMNVRREYLLSDSMEAVMSLSRKDLRKVWRFEFIGEAGIDAGGLAREWFELVTDEVFDPDMGLWQTSATNQMCIQINPASGAFISCLLRFSSQNSHVFIGSLDISCPEDHLIYFRFIGRIMGKAMFDRQLVKGHLVQHLYKHILGWPVMFSDLKDIDEEYYNSLKGLKDMGSDI-EYLYADFTTTEETLGVKRTVELVPGGADIDVTEENLPEYIEANLKYRLLGRYEKQLNELLLGFFDVIPEPLLTIFDFQELELLMCGLPEIDMDNWKENTEYSGDYDREGPNHKVCGWFWEIV-SEYDQELKARLLQFVTGTSGVPAKGFSSLQGNDGNVRRFTIHGVALETCVYPRSHTCFNRIDLPIYDSKDELEEKLKIAITMAATGFDIE 648          
BLAST of NO04G02780 vs. NCBI_GenBank
Match: EJK62158.1 (hypothetical protein THAOC_17242, partial [Thalassiosira oceanica])

HSP 1 Score: 511.1 bits (1315), Expect = 5.700e-141
Identity = 271/559 (48.48%), Postives = 363/559 (64.94%), Query Frame = 0
Query:  208 LYEVVVPQGVRPGEPFVLLADGQRVTVTCPVDARPNHKIRFKLPI-VPTNEQLAAYEMKYN--KDGWVRCLGV-DVKFHWFKVDASNS-NLIGNSAIGXXXXXXXRRPKIGNFSFEDTAFVRSFRGPRSSPELVLVPPSEVAMDTT--VEGTR-LNFHTLSHGAQLP-FDKKVEFFRQHC-SSLKVPWEKGHMEIRVRRSQLLSDSLMAFERISKENMRKIFRFEFLGEPAIDAGGVAREWYDQVTDALFNPDFGLFQYSGVDQMCMQINAASGMV-EAHHDRYFRFLGRLLGKALLDGQIVRHHLVRPVMKHILGWPVVLADLEYLDAETLQNLGKLQDMDPGVLGDLCLDFTVTENFLGQSETVELVPDGANKTLDADNLDAYLEANLKFRLCDRVKVQLRELLLGFYECVPEALLTIFDFQQLELLLCGMPNLDIADWMAQTEYGGEFSRQGAHHRVVQWFWEVVRDDFDQEQRARLLQFTTGTSGVPAQGFAFLQGNDGNIRKFTVNSISLEQSVFPRAHTCFNRIDLPLYKSKKDLKERLSLAIQMESSGFSIE 756
            ++EVVVP GV+P + F L+A+GQRV VTCP +  P  K+RF+LPI    ++   A  + Y   KDGW R L V D KF W ++D     +L  +           RR            F++       + +L L P +E   D++  V+G   +N+  ++   Q P F+ K   F++ C   L+V W +GHM + VRR  LL DS+ A   +S+++MRKI+RFEF+ E  +DAGG+AREW++ V+  LF+PDFGLF  S  +QM M+IN  S +     H  YFRFLGR++GKAL DGQ++  H+VR + KHILGWPV+  DLE  D E   NL  L D+D   + DLCL+FT TE   G +  VELV  G    +  DNL  +LEAN K+ L DRVK QL ELLLGFY+ +PE LLT+FDFQ+LELL+ G+P +D+ DWMA T Y G+F R+GA H+  QWFWEVVR +FD  +RA+LLQFTTG+SGVPA+GF+ LQGNDGNI+KF ++ I  EQS+FPRAHTCFNRIDLP Y SK++L+E+L +A+    +GF IE
Sbjct:    1 MFEVVVPAGVQPNQQFSLIANGQRVLVTCPPNVSPGQKVRFELPIRNGKDDDSPAVHLDYEDIKDGWCRTLRVTDYKFQWIRMDEDGEIDLTPSPVFDIKHSALTRR----------LVFLQGNDARMRTGKLSLGPANESWSDSSVHVDGKEVINYTEIAAAQQRPRFEDKSRVFQEMCREKLRVDWSEGHMRVLVRRQHLLHDSIDAVMSLSRDDMRKIWRFEFMSEVGVDAGGLAREWFELVSKKLFDPDFGLFLPSATNQMAMRINPDSELACPEDHLIYFRFLGRVMGKALFDGQLIAGHMVRHLYKHILGWPVMFEDLEIPDEEYYNNLKSLLDLDN--VEDLCLNFTFTETAFGVNRDVELVEGGEEIDVTNDNLPEFLEANFKYHLMDRVKPQLTELLLGFYDVIPEPLLTMFDFQELELLMSGLPEIDVDDWMANTLYQGQFERRGAMHKSCQWFWEVVR-EFDHAERAKLLQFTTGSSGVPARGFSVLQGNDGNIKKFALSGIRKEQSLFPRAHTCFNRIDLPCYSSKEELREKLKIALATSVTGFDIE 546          
BLAST of NO04G02780 vs. NCBI_GenBank
Match: GAX21855.1 (E3 ubiquitin-protein ligase NEDD4 [Fistulifera solaris])

HSP 1 Score: 493.4 bits (1269), Expect = 1.200e-135
Identity = 279/745 (37.45%), Postives = 400/745 (53.69%), Query Frame = 0
Query:   68 TEPGAFDIPGQQRQAGQIRAQVRIPAGVRPGQHFAVLLEGQQVMVRCPDRASPGDLIAIEFQASTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFS----------LPPTTSGAAGAGVPGVGSTGGS----------------------TAGPPELSPFEKLYEVVVPQGVRPGEPFVLLADGQRVTVTCPVDARPNHKIRFKLPIVPTNEQLAAYEMKYNKD--GWVRCLGV-DVKFHWF------------KVDASNSNLIGNSAIGXXXXXXXRRPKIGNFSFEDTAFVRSF------RGPRSSPELVLVPPSEVAMDTTV---EGTRLNFHTLSHGAQLPFDKKVEFFRQHCSSLKVPWEKGHMEIRVRRSQLLSDSLMAFERISKENMRKIFRFEFLGEPAIDAGGVAREWYDQVTDALFNPDFGLFQYSGVDQMCMQINAASGM-VEAHHDRYFRFLGRLLGKALLDGQIVRHHLVRPVMKHILGWPVVLADLEYLDAETLQNLGKLQDMDPGVLGDLCLDFTVTENFLGQSETVELVPDGANKTLDADNLDAYLEANLKFRLCDRVKVQLRELLLGFYECVPEALLTIFDFQQLELLLCGMPNLDIADWMAQTEYGGEFSRQGAHHRVVQWFWEVVRDDFDQEQRARLLQFTTGTSGVPAQGFAFLQGNDGNIRKFTVNSISLEQSVFPRAHTCFNRIDLPLYKSKKDLKERLSLAIQMESSGFSIE 756
            T PGA+ +        Q+  +V +P GVRPG  F V    ++V VRCP  +SPG  + I                                              S          +PP        G     + GG                           PE +P  +++EV VP+GV+PG+PF L+A+ QRV VTCP +  P  KIRF+LP+   +  +   E+ Y  +  GW R + V D+KF W             K D ++ + +  +  G           +  F F  +A+VR             +  + L+P  E  +D+ +     T L++  ++        +K E+F+  C+ L   WE GH++I VRRS LL DS+ A   + ++++RK +R EFLGEP IDAGGVAREW++ VT+ +F+P FGL+  S  +Q C+ IN +SG+     H  YFRFLGR++G+AL D Q+++ H+V+ + KHILGWP+   D++  D E   +L KL  M+   +  + LDFTVTE  +G    +EL   GA   +   NL+ YLE+NL++R+ +R + QL+ELLLGF++ +PE  LTIFD  +LEL LCG+P +D+ DW A T+Y G +   G  H  VQWFWEVV ++FDQEQRARLLQF TGTSGVP++GF+ LQG DGNI+KFT++ +  +   +PRAHTCFNRIDLP Y SK++L E+L  AI +   GF IE
Sbjct:  106 TRPGAYQVTRTAVGPAQV-YRVTVPVGVRPGAEFTVHAGLRRVRVRCPPTSSPGQSLQITLPPEPVTHHLLLKMAPLTAAEGTPEGGGAVTMTPDVQAVNRQAMLSGGTAQTFLVTIPPNVH----PGQQFTVNVGGXXXXXXXXXXXXXXXXVRIVPPVVRDEPEAAPTTQVFEVAVPEGVQPGQPFALMANDQRVLVTCPPNVVPGQKIRFQLPV---SHLVGKIELAYESETSGWRRTVRVNDLKFQWVRLEKKKEDAKKEKTDDNDEDPLAETTEGMGPSKVVDVEGMKQFDFRRSAYVRKVYYLEGNDARMRTGTIELIPAHEAVVDSRLVYHNRTLLSYSDIASVQGKSLQEKTEWFQNICNQLTAAWEDGHIKIAVRRSMLLQDSVDAVMSLGRDDLRKRWRIEFLGEPGIDAGGVAREWFELVTEQIFDPAFGLWIPSANNQACVNINPSSGLSCPEDHLIYFRFLGRVIGRALFDRQLIKGHMVQSIYKHILGWPITFEDIKAQDEEYYHSLQKLTKMED--VSIMYLDFTVTEESMGARREIELTEGGALTEVTNANLEQYLESNLRYRMLERTRPQLQELLLGFFDVIPEPPLTIFDANELELTLCGLPTIDMEDWQANTKYSGLYEMTGRSHETVQWFWEVVLEEFDQEQRARLLQFVTGTSGVPSRGFSVLQGIDGNIKKFTIHGVDRKAYFYPRAHTCFNRIDLPNYSSKEELLEKLKAAISLSGVGFDIE 840          
BLAST of NO04G02780 vs. NCBI_GenBank
Match: EJK61369.1 (hypothetical protein THAOC_18147 [Thalassiosira oceanica])

HSP 1 Score: 485.7 bits (1249), Expect = 2.600e-133
Identity = 248/568 (43.66%), Postives = 359/568 (63.20%), Query Frame = 0
Query:  206 EKLYEVVVPQGVRPGEPFVLLADGQRVTVTCPVDARPNHKIRFKLPI-----VPTNEQLAAYEMKYNKDGWVRCL-GVDVKFHWFKVDASNSNLIGNSAIGXXXXXXXRRPKIGNFSFEDTAFVRSFRGPRSSPELVLVPPSEVAMDTTVEGTR----LNFHTLSHGAQLPFDKKVEFFRQHCSSLKVPWEKGHMEIRVRRSQLLSDSLMAFERISKENMRKIFRFEFLGEPAIDAGGVAREWYDQVTDALFNPDFGLFQYSGVDQMCMQINAASGMVEAH------HDRYFRFLGRLLGKALLDGQIVRHHLVRPVMKHILGWPVVLADLEYLDAETLQNLGKLQDM-DPGV-LGDLCLDFTVTENFLGQSETVELVPDGANKTLDADNLDAYLEANLKFRLCDRVKVQLRELLLGFYECVPEALLTIFDFQQLELLLCGMPNLDIADWMAQTEYGGEFSRQGAHHRVVQWFWEVVRDDFDQEQRARLLQFTTGTSGVPAQGFAFLQGNDGNIRKFTVNSISLEQSVFPRAHTCFNRIDLPLYKSKKDLKERLSLAIQMESSGFSIE 756
            ++++EV+VP+GV PG+PF LLA G RV VTCP +A    KIRF LPI          +LA  ++ Y+KDGW R +   D+KF W + D +     G   +        +   +    F D               + LV P +  +D+ +E       +++  +++     ++ K+++F++                   R  LLSDS+ A   +S++++RK++RFEF+GE  ID GG+AREW++ VTD +F+PD GL+Q S  +QMCMQIN ASG   ++      H  YFRF+GR++GKA+ D Q+V+ H+V+ + KHILGWPV+ +DL+ +D E   +L  L+DM D G  +  LC DFT TE   G    VELVP GA+  +  +NL  Y+EA+LK RL  R + QL ELLLGF++ +P+ LLTIFDFQ+LELL+CG+P +D+ +W   TEY G++ R+G +H V  WFWEVV  ++DQE +ARLLQF TGTSGVPA GF  LQGN+G++R+FT++ ++LE  V+PR+HTCFNRIDLP+Y SK +L+E+L +AI M ++GF IE
Sbjct:  471 KQMFEVIVPEGVYPGQPFALLAGGVRVLVTCPKNAAAGQKIRFSLPIGLVKLDGPKSKLAEIKLSYDKDGWTRTIRASDMKFQWTRFDENG----GVDTVTSQRFDDTKSAYVLKLDFHDD------HDKMRHGSVSLVTPEKGFVDSNIESVSGQELVSYQDIANAQNKSYEDKIQWFQE------------------TREYLLSDSMEAVMSLSRKDLRKVWRFEFIGEAGIDVGGLAREWFELVTDEVFDPDMGLWQTSATNQMCMQINPASGEFISYIACPEDHLIYFRFIGRIMGKAMFDRQLVKGHMVKHLYKHILGWPVMFSDLKDIDEEYYNSLKGLKDMKDMGENIECLCADFTTTEETFGGKRVVELVPGGADIEVTEENLPEYIEASLKHRLLGRYEKQLNELLLGFFDVIPKPLLTIFDFQELELLMCGLPEIDMDNWKENTEYSGDYDREGPNHEVCGWFWEVV-SEYDQELKARLLQFVTGTSGVPANGFGSLQGNNGDVRRFTIHGVALETCVYPRSHTCFNRIDLPIYDSKDELEEKLKIAITMAATGFDIE 1009          
The following BLAST results are available for this feature:
BLAST of NO04G02780 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28785.10.000e+078.52hect e3 ubiquitin [Nannochloropsis gaditana][more]
XP_009039867.12.300e-18249.04hypothetical protein AURANDRAFT_38473 [Aureococcus... [more]
XP_009041254.12.700e-16755.16hypothetical protein AURANDRAFT_55365 [Aureococcus... [more]
GAX29516.12.200e-14840.92E3 ubiquitin-protein ligase NEDD4 [Fistulifera sol... [more]
GAX13457.11.100e-14740.83E3 ubiquitin-protein ligase NEDD4 [Fistulifera sol... [more]
CBJ29865.19.100e-14740.32ubiquitin protein ligase [Ectocarpus siliculosus][more]
EJK74143.11.900e-14440.68hypothetical protein THAOC_04195, partial [Thalass... [more]
EJK62158.15.700e-14148.48hypothetical protein THAOC_17242, partial [Thalass... [more]
GAX21855.11.200e-13537.45E3 ubiquitin-protein ligase NEDD4 [Fistulifera sol... [more]
EJK61369.12.600e-13343.66hypothetical protein THAOC_18147 [Thalassiosira oc... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL081nonsL081Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR058ncniR058Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR111ngnoR111Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009539NSK009539Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G02780.1NO04G02780.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|578862gene_2050Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100002g6gene1927Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G02780.1NO04G02780.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G02780 ID=NO04G02780|Name=NO04G02780|organism=Nannochloropsis oceanica|type=gene|length=2268bp
ATGGGACAAGAACAAAGCGCTGCCAACCACCAACATCCGCAATCGCTTTA
TCCCGGCGCGGGCGGCTCCCCCGGAGGGCTTCATGGTGGCGGCAGGCGGA
GACCGACCTCAGGCATGTCTCCCTACCAGCAGCCCTCGCCCTCCTCCACA
TTCCATTCCGGTGGTGGCGGCGGCGGGGGTCGCGCATCCCGGCCCGTCAA
CACCGAACCGGGAGCATTCGACATCCCTGGACAACAGCGACAAGCGGGTC
AGATTCGGGCGCAAGTACGGATACCAGCAGGGGTGCGACCAGGGCAGCAT
TTCGCGGTGCTTTTGGAAGGGCAGCAAGTGATGGTCCGCTGTCCTGATCG
TGCTTCGCCGGGTGATCTGATTGCAATTGAATTTCAAGCGTCCACATTCA
TTGTGCAAGTGCCTGAAGGAGTCCATCCAGGACAGACTTTTGATGTGATG
GTGCGTGGGGTCAGGCAACGAGTCACTTGCCCAGAGGGCGTGCGGCCCGG
GATGCAAATCCGCTTTTCCTTGCCTCCCACCACTAGTGGTGCTGCTGGTG
CTGGTGTGCCAGGAGTAGGATCTACAGGAGGGTCTACTGCGGGGCCGCCG
GAGCTGTCGCCATTTGAGAAGTTGTATGAGGTGGTTGTGCCTCAGGGGGT
ACGGCCAGGTGAACCTTTTGTTTTGTTGGCGGACGGGCAACGCGTGACGG
TGACGTGTCCGGTTGATGCGCGACCGAATCATAAAATTCGATTCAAGTTG
CCCATCGTCCCGACGAATGAGCAGTTGGCGGCGTACGAGATGAAGTACAA
CAAGGATGGGTGGGTGCGGTGTCTTGGGGTTGATGTCAAATTTCACTGGT
TTAAGGTCGATGCTTCCAATAGCAACTTGATCGGGAACAGTGCTATCGGT
GGGGGTGGGGCGGGTGGAGGAAGGAGGCCCAAGATTGGTAATTTCTCGTT
TGAAGACACGGCATTCGTAAGGTCATTTAGGGGTCCTCGTTCCTCACCTG
AGTTGGTGCTAGTCCCACCCTCGGAGGTGGCGATGGACACGACAGTGGAG
GGGACGAGACTGAATTTCCATACATTGTCGCATGGGGCTCAATTACCGTT
CGATAAGAAGGTAGAGTTTTTTAGGCAGCATTGCTCGAGCTTGAAGGTGC
CCTGGGAGAAAGGGCATATGGAGATAAGGGTACGGAGGTCGCAATTGCTC
TCGGATTCGTTGATGGCGTTTGAGAGGATCAGCAAGGAGAATATGCGGAA
GATCTTTCGATTTGAGTTTTTGGGCGAGCCAGCGATTGATGCGGGGGGGG
TGGCGAGGGAGTGGTATGACCAGGTCACTGATGCCTTGTTTAACCCTGAT
TTTGGTTTGTTTCAGTACAGTGGGGTAGATCAGATGTGCATGCAGATAAA
CGCAGCGAGTGGTATGGTGGAAGCGCACCATGATCGGTACTTCCGTTTTC
TTGGGCGGTTGCTTGGAAAGGCTTTGTTGGACGGGCAAATTGTGCGGCAT
CATTTGGTGAGACCCGTTATGAAGCACATCCTGGGGTGGCCGGTCGTGTT
GGCGGACCTGGAATACCTCGATGCGGAGACCTTGCAAAATTTGGGTAAAT
TACAAGATATGGACCCGGGCGTTTTGGGGGATCTATGCCTGGACTTTACT
GTGACGGAGAACTTTCTGGGTCAGTCGGAAACGGTGGAGCTGGTCCCAGA
CGGCGCGAACAAGACGTTGGACGCCGATAATCTCGATGCTTATCTGGAAG
CCAACTTGAAGTTTCGGTTGTGTGATCGGGTGAAGGTACAATTGAGGGAG
TTGCTGTTGGGATTTTATGAGTGTGTGCCCGAGGCTTTGTTGACGATTTT
CGATTTTCAGCAGTTGGAGTTGTTGCTGTGCGGGATGCCGAATTTGGACA
TCGCGGATTGGATGGCCCAAACAGAATACGGAGGGGAGTTCTCACGGCAA
GGCGCGCATCATCGCGTGGTTCAATGGTTTTGGGAGGTGGTGAGGGATGA
CTTTGATCAGGAGCAACGGGCGAGGTTATTACAGTTTACGACGGGCACTT
CGGGGGTCCCGGCACAGGGGTTTGCGTTTTTGCAGGGGAATGATGGGAAC
ATACGAAAATTTACGGTAAACAGTATTTCGTTGGAGCAATCCGTTTTCCC
TCGGGCACATACCTGCTTTAATCGGATTGATTTGCCGTTATACAAATCGA
AGAAGGATTTGAAGGAACGCCTGTCGCTGGCCATTCAGATGGAATCGTCG
GGGTTTTCGATTGAGTGA
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protein sequence of NO04G02780.1

>NO04G02780.1-protein ID=NO04G02780.1-protein|Name=NO04G02780.1|organism=Nannochloropsis oceanica|type=polypeptide|length=756bp
MGQEQSAANHQHPQSLYPGAGGSPGGLHGGGRRRPTSGMSPYQQPSPSST
FHSGGGGGGGRASRPVNTEPGAFDIPGQQRQAGQIRAQVRIPAGVRPGQH
FAVLLEGQQVMVRCPDRASPGDLIAIEFQASTFIVQVPEGVHPGQTFDVM
VRGVRQRVTCPEGVRPGMQIRFSLPPTTSGAAGAGVPGVGSTGGSTAGPP
ELSPFEKLYEVVVPQGVRPGEPFVLLADGQRVTVTCPVDARPNHKIRFKL
PIVPTNEQLAAYEMKYNKDGWVRCLGVDVKFHWFKVDASNSNLIGNSAIG
GGGAGGGRRPKIGNFSFEDTAFVRSFRGPRSSPELVLVPPSEVAMDTTVE
GTRLNFHTLSHGAQLPFDKKVEFFRQHCSSLKVPWEKGHMEIRVRRSQLL
SDSLMAFERISKENMRKIFRFEFLGEPAIDAGGVAREWYDQVTDALFNPD
FGLFQYSGVDQMCMQINAASGMVEAHHDRYFRFLGRLLGKALLDGQIVRH
HLVRPVMKHILGWPVVLADLEYLDAETLQNLGKLQDMDPGVLGDLCLDFT
VTENFLGQSETVELVPDGANKTLDADNLDAYLEANLKFRLCDRVKVQLRE
LLLGFYECVPEALLTIFDFQQLELLLCGMPNLDIADWMAQTEYGGEFSRQ
GAHHRVVQWFWEVVRDDFDQEQRARLLQFTTGTSGVPAQGFAFLQGNDGN
IRKFTVNSISLEQSVFPRAHTCFNRIDLPLYKSKKDLKERLSLAIQMESS
GFSIE*
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Synonyms
Publications